Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610750 | AES90106.1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 55 | 201 | 1.98e-101 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610750 | sp|Q941A6|SDH6_ARATH | 69.466 | 131 | 40 | 0 | 14 | 144 | 12 | 142 | 5.03e-68 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094940 | Msa0610750 | 0.833080 | 6.547251e-56 | -8.615850e-47 |
| Msa0610750 | Msa0621170 | 0.814668 | 1.369971e-51 | -8.615850e-47 |
| Msa0610750 | Msa0881210 | 0.809977 | 1.449141e-50 | -8.615850e-47 |
| Msa0610750 | Msa0998890 | 0.804362 | 2.240119e-49 | -8.615850e-47 |
| Msa0610750 | Msa1297430 | 0.806278 | 8.892147e-50 | -8.615850e-47 |
| Msa0610750 | Msa1328830 | 0.827932 | 1.190593e-54 | -8.615850e-47 |
| Msa0610750 | Msa1437530 | 0.968099 | 3.375468e-128 | -8.615850e-47 |
| Msa0226620 | Msa0610750 | 0.803850 | 2.863599e-49 | -8.615850e-47 |
| Msa0377610 | Msa0610750 | 0.833885 | 4.123515e-56 | -8.615850e-47 |
| Msa0470230 | Msa0610750 | 0.815849 | 7.489309e-52 | -8.615850e-47 |
| Msa0260270 | Msa0610750 | 0.823683 | 1.213694e-53 | -8.615850e-47 |
| Msa0304270 | Msa0610750 | 0.852606 | 4.134954e-61 | -8.615850e-47 |
| Msa0304310 | Msa0610750 | 0.831160 | 1.954147e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610750 | MtrunA17_Chr4g0043841 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 9.27e-105 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0610750 | AT1G08480.1 | 69.466 | 131 | 40 | 0 | 14 | 144 | 12 | 142 | 5.11e-69 | 205 |
Find 77 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCTGAGGCTAAGTTTC+TGG | 0.132479 | 4_2:+58626903 | Msa0610750:CDS |
| ATTCGTCTTCCCAGTCATTC+TGG | 0.231471 | 4_2:+58623204 | Msa0610750:CDS |
| ATCATGCACTTCAACTTTAC+AGG | 0.238941 | 4_2:+58626869 | Msa0610750:CDS |
| ATCGCTTCTGATCCTGTTCA+TGG | 0.253430 | 4_2:+58623341 | Msa0610750:CDS |
| CTGAAGAATCAAACAGAAAA+TGG | 0.258389 | 4_2:-58621802 | None:intergenic |
| CTTGGTGAAGTTGGAATAAT+TGG | 0.263649 | 4_2:-58623270 | None:intergenic |
| GGGAAGGCTACAAAGAGTTT+TGG | 0.275599 | 4_2:+58623225 | Msa0610750:CDS |
| AAATACACCTCCAGCTAAAA+AGG | 0.286066 | 4_2:-58626818 | None:intergenic |
| TGTTTGATTCTTCAGTTTAG+AGG | 0.290261 | 4_2:+58621810 | Msa0610750:five_prime_UTR |
| GTGATAAGCCCCTCACTTCA+TGG | 0.377665 | 4_2:+58623294 | Msa0610750:CDS |
| GCAGTGCAATATGGTCTTGC+AGG | 0.377833 | 4_2:+58626505 | Msa0610750:CDS |
| GGTCTTGCAGGAAGTGCTTT+GGG | 0.386470 | 4_2:+58626517 | Msa0610750:CDS |
| AAGAAGAAATGAAACTGAAT+AGG | 0.402556 | 4_2:-58621640 | None:intergenic |
| GTTGGAATAATTGGTCATAA+AGG | 0.404341 | 4_2:-58623261 | None:intergenic |
| GAATTGAAGCTGTTTGCGTC+TGG | 0.411048 | 4_2:+58626954 | Msa0610750:exon |
| CTTATCACGCTTGGTGAAGT+TGG | 0.419972 | 4_2:-58623279 | None:intergenic |
| CACCAGCGGTGGTGTGGTGG+TGG | 0.421779 | 4_2:-58621730 | None:intergenic |
| TTCGTCTTCCCAGTCATTCT+GGG | 0.426208 | 4_2:+58623205 | Msa0610750:CDS |
| TGGTCTTGCAGGAAGTGCTT+TGG | 0.428188 | 4_2:+58626516 | Msa0610750:CDS |
| ACAGCTTCAATTCCCTCCTT+CGG | 0.445398 | 4_2:-58626944 | None:intergenic |
| GGTGTATTTGGGTGGACATA+TGG | 0.445640 | 4_2:+58626832 | Msa0610750:CDS |
| GTTACCACGGGTCCATGAAC+AGG | 0.451033 | 4_2:-58623353 | None:intergenic |
| GCTAGAGAAGCAGTGCAATA+TGG | 0.455581 | 4_2:+58626496 | Msa0610750:CDS |
| TAAATATTCTGTTGTGACAT+AGG | 0.457331 | 4_2:+58627054 | Msa0610750:three_prime_UTR |
| TGTAGCCTTCCCAGAATGAC+TGG | 0.458362 | 4_2:-58623214 | None:intergenic |
| GTAATGTTCGGTCGCTAGGT+TGG | 0.468684 | 4_2:-58621705 | None:intergenic |
| TAATGTTCGGTCGCTAGGTT+GGG | 0.477785 | 4_2:-58621704 | None:intergenic |
| GTGTGACGAGGCACTTGGTT+TGG | 0.489926 | 4_2:+58627211 | Msa0610750:three_prime_UTR |
| CGTTCTCAGATGAAAGAGAA+AGG | 0.497516 | 4_2:-58621665 | None:intergenic |
| TCAGCGAACATAAATTGCAT+TGG | 0.505276 | 4_2:-58627030 | None:intergenic |
| AATGTAAACAAAAGTTTGAA+AGG | 0.509648 | 4_2:+58627286 | Msa0610750:three_prime_UTR |
| AGTTTCTGGAGTGGTGGAAA+AGG | 0.517098 | 4_2:+58626917 | Msa0610750:CDS |
| TAGCTGGAGGTGTATTTGGG+TGG | 0.524323 | 4_2:+58626824 | Msa0610750:CDS |
| GAGTATGCAGCGGTGATGGA+TGG | 0.524409 | 4_2:-58621777 | None:intergenic |
| GGATGTAATGTTCGGTCGCT+AGG | 0.524714 | 4_2:-58621709 | None:intergenic |
| GAGAAGGAGGAGAGTGGTCG+CGG | 0.536260 | 4_2:-58621755 | None:intergenic |
| GGAGGAGTATGCAGCGGTGA+TGG | 0.536395 | 4_2:-58621781 | None:intergenic |
| AAATATTCAAGGAGTTTACA+TGG | 0.544388 | 4_2:+58626568 | Msa0610750:CDS |
| AAGGAAAACAACACAACAGA+GGG | 0.550257 | 4_2:-58627133 | None:intergenic |
| ATCCACCACCACACCACCGC+TGG | 0.552222 | 4_2:+58621728 | Msa0610750:five_prime_UTR |
| ACTTTACAGGGTAGACACAT+TGG | 0.564264 | 4_2:+58626882 | Msa0610750:CDS |
| AGTGAGGGGCTTATCACGCT+TGG | 0.564366 | 4_2:-58623288 | None:intergenic |
| TCTTCCCAGTCATTCTGGGA+AGG | 0.573126 | 4_2:+58623209 | Msa0610750:CDS |
| GTAGCCTTCCCAGAATGACT+GGG | 0.575729 | 4_2:-58623213 | None:intergenic |
| GTTCTCAGATGAAAGAGAAA+GGG | 0.575776 | 4_2:-58621664 | None:intergenic |
| GCGGCTCACCAGCGGTGGTG+TGG | 0.577126 | 4_2:-58621736 | None:intergenic |
| TGGATGGAGAAGGAGGAGAG+TGG | 0.580671 | 4_2:-58621761 | None:intergenic |
| GCTCACCAGCGGTGGTGTGG+TGG | 0.580762 | 4_2:-58621733 | None:intergenic |
| GGTAGACACATTGGCTTCTG+AGG | 0.581406 | 4_2:+58626891 | Msa0610750:CDS |
| GAAAACAACACAACAGAGGG+AGG | 0.581702 | 4_2:-58627130 | None:intergenic |
| AGGCTAAGTTTCTGGAGTGG+TGG | 0.583207 | 4_2:+58626911 | Msa0610750:CDS |
| AGAGTTAGACCATGAAGTGA+GGG | 0.583758 | 4_2:-58623303 | None:intergenic |
| CTGAGGCTAAGTTTCTGGAG+TGG | 0.585312 | 4_2:+58626908 | Msa0610750:CDS |
| GAGTGGTCGCGGCTCACCAG+CGG | 0.585737 | 4_2:-58621744 | None:intergenic |
| AAAGGAAAACAACACAACAG+AGG | 0.591082 | 4_2:-58627134 | None:intergenic |
| TCATGCACTTCAACTTTACA+GGG | 0.597628 | 4_2:+58626870 | Msa0610750:CDS |
| GTGGTGGTGGATGTAATGTT+CGG | 0.599785 | 4_2:-58621717 | None:intergenic |
| CTTATGGACCTTGTGTGACG+AGG | 0.606780 | 4_2:+58627199 | Msa0610750:three_prime_UTR |
| ACCTTGTGTGACGAGGCACT+TGG | 0.610178 | 4_2:+58627206 | Msa0610750:three_prime_UTR |
| TGGTCGCGGCTCACCAGCGG+TGG | 0.610630 | 4_2:-58621741 | None:intergenic |
| ATATTTCCATGCAAAACTTG+CGG | 0.611503 | 4_2:-58626551 | None:intergenic |
| TGGAAAAGGAAGACCGAAGG+AGG | 0.614633 | 4_2:+58626931 | Msa0610750:CDS |
| ATGGTCTAACTCTGATGTTG+AGG | 0.618270 | 4_2:+58623313 | Msa0610750:CDS |
| TCACGTAGATCGCTACTGAT+CGG | 0.620673 | 4_2:+58621048 | Msa0610750:five_prime_UTR |
| ACCAAGTGCCTCGTCACACA+AGG | 0.620950 | 4_2:-58627207 | None:intergenic |
| CAGAGTTAGACCATGAAGTG+AGG | 0.623061 | 4_2:-58623304 | None:intergenic |
| TGATCCTGTTCATGGACCCG+TGG | 0.624228 | 4_2:+58623349 | Msa0610750:CDS |
| GCGGTGATGGATGGAGAAGG+AGG | 0.631664 | 4_2:-58621768 | None:intergenic |
| GCAGCGGTGATGGATGGAGA+AGG | 0.641167 | 4_2:-58621771 | None:intergenic |
| GGAAAAGGAAGACCGAAGGA+GGG | 0.642478 | 4_2:+58626932 | Msa0610750:CDS |
| AGTGAAACAAGTGAAGGTGA+TGG | 0.649584 | 4_2:+58623166 | Msa0610750:exon |
| AAGAATCAAACAGAAAATGG+AGG | 0.650208 | 4_2:-58621799 | None:intergenic |
| TGGTGGAAAAGGAAGACCGA+AGG | 0.651293 | 4_2:+58626928 | Msa0610750:CDS |
| CTGCAGAGTGAAACAAGTGA+AGG | 0.670293 | 4_2:+58623160 | Msa0610750:intron |
| CAGTAGCGATCTACGTGAGA+CGG | 0.672937 | 4_2:-58621043 | None:intergenic |
| GAGTTAGACCATGAAGTGAG+GGG | 0.691408 | 4_2:-58623302 | None:intergenic |
| GAAAATGGAGGAGTATGCAG+CGG | 0.693351 | 4_2:-58621787 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTACTCATAAATAT+TGG | - | chr4_2:58621401-58621420 | None:intergenic | 10.0% |
| !!! | TTTTATTAGAAAAAATAGAA+CGG | + | chr4_2:58624252-58624271 | Msa0610750:intron | 10.0% |
| !! | TTTAGAGAAAAATAAATAAA+TGG | - | chr4_2:58625645-58625664 | None:intergenic | 10.0% |
| !!! | TAATTTTATTTAGAACAAAA+AGG | - | chr4_2:58627155-58627174 | None:intergenic | 10.0% |
| !!! | TTTTGTTCTAAATAAAATTA+TGG | + | chr4_2:58627155-58627174 | Msa0610750:three_prime_UTR | 10.0% |
| !! | AAAAAAAAAAACAAAGAAAG+AGG | + | chr4_2:58621413-58621432 | Msa0610750:intron | 15.0% |
| !! | TATAAATCTAAAGATAAAAG+AGG | + | chr4_2:58621537-58621556 | Msa0610750:intron | 15.0% |
| !! | AATATGTAATTTACTGATAA+GGG | + | chr4_2:58622077-58622096 | Msa0610750:intron | 15.0% |
| !!! | TTTTATTGTTTCAATTTGTT+AGG | + | chr4_2:58622152-58622171 | Msa0610750:intron | 15.0% |
| !! | ATTATGTAAAATATTATCAC+AGG | - | chr4_2:58622195-58622214 | None:intergenic | 15.0% |
| !! | AATTAACAAAATATTATCAC+AGG | - | chr4_2:58622332-58622351 | None:intergenic | 15.0% |
| !!! | TAGTTTAAATTTTGAATGAT+CGG | + | chr4_2:58622417-58622436 | Msa0610750:intron | 15.0% |
| !!! | GCAATATGATTTATATATTT+TGG | + | chr4_2:58622473-58622492 | Msa0610750:intron | 15.0% |
| !!! | TATATTTTGGTTTATTTTGA+TGG | + | chr4_2:58622486-58622505 | Msa0610750:intron | 15.0% |
| !!! | TTTTAGAAATTAATCCATTT+TGG | - | chr4_2:58622617-58622636 | None:intergenic | 15.0% |
| !! | ATAAATTATGCATATTATAG+AGG | - | chr4_2:58622780-58622799 | None:intergenic | 15.0% |
| !! | GAGAAAATAAGTAAATAAAT+TGG | - | chr4_2:58623021-58623040 | None:intergenic | 15.0% |
| !!! | TAAAACAATTTTAATCAAGA+AGG | - | chr4_2:58623659-58623678 | None:intergenic | 15.0% |
| !!! | AAATTGTTTTAGATTATATG+AGG | + | chr4_2:58623668-58623687 | Msa0610750:intron | 15.0% |
| !!! | TATCTATTTTGTTGTTAAAT+TGG | + | chr4_2:58623885-58623904 | Msa0610750:intron | 15.0% |
| !! | TAATATTTCATTTGGAAAAA+TGG | + | chr4_2:58623996-58624015 | Msa0610750:intron | 15.0% |
| !! | CAATTATTAAAGAAAATACT+GGG | - | chr4_2:58625348-58625367 | None:intergenic | 15.0% |
| !! | ACAATTATTAAAGAAAATAC+TGG | - | chr4_2:58625349-58625368 | None:intergenic | 15.0% |
| !!! | TTTGTTTAATTTTTCTCATT+TGG | - | chr4_2:58625993-58626012 | None:intergenic | 15.0% |
| !! | CATATGAAACAAAAAAAATA+GGG | - | chr4_2:58626216-58626235 | None:intergenic | 15.0% |
| !! | ACATATGAAACAAAAAAAAT+AGG | - | chr4_2:58626217-58626236 | None:intergenic | 15.0% |
| !!! | TAAGTAACAAAATTTTACAT+TGG | - | chr4_2:58627183-58627202 | None:intergenic | 15.0% |
| !!! | ATGTAAAATTTTGTTACTTA+TGG | + | chr4_2:58627183-58627202 | Msa0610750:three_prime_UTR | 15.0% |
| !! | CAATATGTAATTTACTGATA+AGG | + | chr4_2:58622076-58622095 | Msa0610750:intron | 20.0% |
| !! | AATTAATAACTATTATCGGT+CGG | + | chr4_2:58622813-58622832 | Msa0610750:intron | 20.0% |
| !! | AGATGTATTTATTTCGATTA+GGG | + | chr4_2:58623067-58623086 | Msa0610750:intron | 20.0% |
| !!! | GACAAAATATATTTTGATAG+AGG | - | chr4_2:58624048-58624067 | None:intergenic | 20.0% |
| !! | CACATTTCAAATAAAAGTAA+AGG | - | chr4_2:58624164-58624183 | None:intergenic | 20.0% |
| !!! | TTGCTTTTCATTTATTTTTC+AGG | + | chr4_2:58624428-58624447 | Msa0610750:intron | 20.0% |
| !! | CTTTCCTAAACTTAAATAAA+TGG | + | chr4_2:58624813-58624832 | Msa0610750:intron | 20.0% |
| !!! | TAATTACTCAATTTTGAGTT+GGG | + | chr4_2:58624901-58624920 | Msa0610750:intron | 20.0% |
| !! | TAGTAAATTATTGTCTTAGA+TGG | - | chr4_2:58625296-58625315 | None:intergenic | 20.0% |
| !!! | GACAATAATTTACTATTTTG+CGG | + | chr4_2:58625301-58625320 | Msa0610750:intron | 20.0% |
| !! | TATACTTTGCTTGAATATAA+TGG | + | chr4_2:58625407-58625426 | Msa0610750:intron | 20.0% |
| !! | TACTTAAAACATATGACTTA+TGG | + | chr4_2:58625482-58625501 | Msa0610750:intron | 20.0% |
| !! | TAAATGGAAAGTTAGAAATA+TGG | - | chr4_2:58625629-58625648 | None:intergenic | 20.0% |
| !! | CATATGTGATTATTCATATT+TGG | + | chr4_2:58626230-58626249 | Msa0610750:intron | 20.0% |
| !!! | TTATTGTTTTACTATTCAAC+AGG | + | chr4_2:58626784-58626803 | Msa0610750:intron | 20.0% |
| !! | AATGTAAACAAAAGTTTGAA+AGG | + | chr4_2:58627286-58627305 | Msa0610750:three_prime_UTR | 20.0% |
| ! | TAGGTTCAATTAAGAAAAGT+GGG | - | chr4_2:58621147-58621166 | None:intergenic | 25.0% |
| ! | ATAGGTTCAATTAAGAAAAG+TGG | - | chr4_2:58621148-58621167 | None:intergenic | 25.0% |
| !! | TTTTCTTAATTGAACCTATG+AGG | + | chr4_2:58621149-58621168 | Msa0610750:intron | 25.0% |
| ! | TTTCTTAATTGAACCTATGA+GGG | + | chr4_2:58621150-58621169 | Msa0610750:intron | 25.0% |
| !! | TTTTATTGGGTGGTTTATTT+CGG | + | chr4_2:58621310-58621329 | Msa0610750:intron | 25.0% |
| ! | GACGACTTTAACAAAAAAAA+TGG | - | chr4_2:58621358-58621377 | None:intergenic | 25.0% |
| !! | ATATTGGTTGCTGATAATAA+CGG | - | chr4_2:58621385-58621404 | None:intergenic | 25.0% |
| ! | GAATTCTGCAAATTAATGAA+GGG | - | chr4_2:58621621-58621640 | None:intergenic | 25.0% |
| ! | AAGAAGAAATGAAACTGAAT+AGG | - | chr4_2:58621643-58621662 | None:intergenic | 25.0% |
| ! | TTGATGTAATTAGATGTGTT+AGG | + | chr4_2:58622289-58622308 | Msa0610750:intron | 25.0% |
| !!! | AATTTTGAATGATCGGTTTT+TGG | + | chr4_2:58622424-58622443 | Msa0610750:intron | 25.0% |
| !!! | ATTTTGGTTTATTTTGATGG+CGG | + | chr4_2:58622489-58622508 | Msa0610750:intron | 25.0% |
| ! | CAGATGTATTTATTTCGATT+AGG | + | chr4_2:58623066-58623085 | Msa0610750:intron | 25.0% |
| ! | ACGATGTAATTGAATTTGAT+TGG | + | chr4_2:58623134-58623153 | Msa0610750:intron | 25.0% |
| !! | CTATGATTTAGAGTATATCT+CGG | + | chr4_2:58623529-58623548 | Msa0610750:intron | 25.0% |
| !!! | TGTTTTAGATTATATGAGGA+TGG | + | chr4_2:58623672-58623691 | Msa0610750:intron | 25.0% |
| !!! | TTTTGGGTTTTTTTTCTTTG+CGG | + | chr4_2:58623750-58623769 | Msa0610750:intron | 25.0% |
| !! | TAGTTTGAAATTTGTACACT+TGG | + | chr4_2:58623936-58623955 | Msa0610750:intron | 25.0% |
| ! | TATGTTGGATTTCTTAATGT+CGG | + | chr4_2:58623972-58623991 | Msa0610750:intron | 25.0% |
| !! | ATGTCGGTTAATATTTCATT+TGG | + | chr4_2:58623988-58624007 | Msa0610750:intron | 25.0% |
| ! | GAAAAATGGTGTGATTAAAA+TGG | + | chr4_2:58624010-58624029 | Msa0610750:intron | 25.0% |
| ! | TTGTAAAATAACAGTCTTCA+TGG | - | chr4_2:58624070-58624089 | None:intergenic | 25.0% |
| !!! | TAATTTTTCGACAAAGTTCA+AGG | - | chr4_2:58624299-58624318 | None:intergenic | 25.0% |
| ! | AAAATTAGTTAGACCAATGA+AGG | + | chr4_2:58624312-58624331 | Msa0610750:intron | 25.0% |
| !!! | TTTATTTTTCAGGTCAACTA+TGG | + | chr4_2:58624438-58624457 | Msa0610750:intron | 25.0% |
| !! | TGGTCCATTTATTTAAGTTT+AGG | - | chr4_2:58624820-58624839 | None:intergenic | 25.0% |
| !!! | GTAATTACTCAATTTTGAGT+TGG | + | chr4_2:58624900-58624919 | Msa0610750:intron | 25.0% |
| ! | TACACATGATAAACAATTTG+TGG | - | chr4_2:58625102-58625121 | None:intergenic | 25.0% |
| ! | AATTCATTATCATGTAAAGC+TGG | + | chr4_2:58625140-58625159 | Msa0610750:intron | 25.0% |
| !! | AATAATCAAGAGAGATTTTG+CGG | - | chr4_2:58625174-58625193 | None:intergenic | 25.0% |
| !!! | CTCCATCTATTTTTAACTAA+CGG | + | chr4_2:58625216-58625235 | Msa0610750:intron | 25.0% |
| ! | ATTCAAGCAAAGTATATGAA+AGG | - | chr4_2:58625403-58625422 | None:intergenic | 25.0% |
| !! | ATACTTTAGTTTCTCTTACT+TGG | + | chr4_2:58625573-58625592 | Msa0610750:intron | 25.0% |
| !! | TACTTTAGTTTCTCTTACTT+GGG | + | chr4_2:58625574-58625593 | Msa0610750:intron | 25.0% |
| ! | AGATAAATCTTAGACATAGA+TGG | - | chr4_2:58625606-58625625 | None:intergenic | 25.0% |
| !!! | GACATAGTTTTAATAAGAGA+AGG | - | chr4_2:58625669-58625688 | None:intergenic | 25.0% |
| ! | TATAACTATATGTGCACTAT+GGG | - | chr4_2:58625779-58625798 | None:intergenic | 25.0% |
| ! | ATAGTGCACATATAGTTATA+GGG | + | chr4_2:58625779-58625798 | Msa0610750:intron | 25.0% |
| !! | GATCATTTTGCAATAGAATT+AGG | - | chr4_2:58625904-58625923 | None:intergenic | 25.0% |
| ! | TTGCAAAATGATCAATAAAC+TGG | + | chr4_2:58625911-58625930 | Msa0610750:intron | 25.0% |
| ! | TTTCTCATTTGGAAAGATTT+GGG | - | chr4_2:58625982-58626001 | None:intergenic | 25.0% |
| !! | TTTTCTCATTTGGAAAGATT+TGG | - | chr4_2:58625983-58626002 | None:intergenic | 25.0% |
| !!! | AATGGACAACCATATTTTTT+TGG | + | chr4_2:58626019-58626038 | Msa0610750:intron | 25.0% |
| ! | TAGCATTTGCCAAAAAAATA+TGG | - | chr4_2:58626031-58626050 | None:intergenic | 25.0% |
| ! | TAAAAAGAGCAACTTTACAT+TGG | - | chr4_2:58626153-58626172 | None:intergenic | 25.0% |
| !! | AATGTAAAGTTGCTCTTTTT+AGG | + | chr4_2:58626152-58626171 | Msa0610750:intron | 25.0% |
| ! | TTAAAAGAGGAAAAGAGAAA+AGG | - | chr4_2:58626364-58626383 | None:intergenic | 25.0% |
| ! | AAATATTCAAGGAGTTTACA+TGG | + | chr4_2:58626568-58626587 | Msa0610750:CDS | 25.0% |
| ! | TAAATATTCTGTTGTGACAT+AGG | + | chr4_2:58627054-58627073 | Msa0610750:three_prime_UTR | 25.0% |
| AAGGAAAGAATGAAGTTAAG+AGG | - | chr4_2:58621079-58621098 | None:intergenic | 30.0% | |
| TCGGTAAAGTAGAAAACAAA+AGG | - | chr4_2:58621098-58621117 | None:intergenic | 30.0% | |
| ATTGGAGTGTATGAACAAAT+CGG | - | chr4_2:58621117-58621136 | None:intergenic | 30.0% | |
| AGAAAAGTGGGAATACAAAT+TGG | - | chr4_2:58621135-58621154 | None:intergenic | 30.0% | |
| TTCTTAATTGAACCTATGAG+GGG | + | chr4_2:58621151-58621170 | Msa0610750:intron | 30.0% | |
| GGAATTCTGCAAATTAATGA+AGG | - | chr4_2:58621622-58621641 | None:intergenic | 30.0% | |
| AAGAATCAAACAGAAAATGG+AGG | - | chr4_2:58621802-58621821 | None:intergenic | 30.0% | |
| CTGAAGAATCAAACAGAAAA+TGG | - | chr4_2:58621805-58621824 | None:intergenic | 30.0% | |
| TGTTTGATTCTTCAGTTTAG+AGG | + | chr4_2:58621810-58621829 | Msa0610750:five_prime_UTR | 30.0% | |
| ATAACCCTAAAAACAACAGA+TGG | - | chr4_2:58621926-58621945 | None:intergenic | 30.0% | |
| !!! | TTTTTAGGGTTATTTGCAGT+GGG | + | chr4_2:58621933-58621952 | Msa0610750:intron | 30.0% |
| TTTCATTGTTCTATTGTCAC+AGG | - | chr4_2:58622231-58622250 | None:intergenic | 30.0% | |
| ATATATGCACTTTACGCTTT+CGG | - | chr4_2:58622373-58622392 | None:intergenic | 30.0% | |
| AAAGCGTAAAGTGCATATAT+AGG | + | chr4_2:58622373-58622392 | Msa0610750:intron | 30.0% | |
| !!! | TTTTGGTTTATTTTGATGGC+GGG | + | chr4_2:58622490-58622509 | Msa0610750:intron | 30.0% |
| TATCCATTTCAAACTGCAAA+AGG | + | chr4_2:58622884-58622903 | Msa0610750:intron | 30.0% | |
| GATGAAAAAAACAATGTCAC+GGG | - | chr4_2:58622943-58622962 | None:intergenic | 30.0% | |
| CGATGAAAAAAACAATGTCA+CGG | - | chr4_2:58622944-58622963 | None:intergenic | 30.0% | |
| !!! | CGTGACATTGTTTTTTTCAT+CGG | + | chr4_2:58622942-58622961 | Msa0610750:intron | 30.0% |
| !! | AAGTTGATGAATCATAGTAG+GGG | - | chr4_2:58622995-58623014 | None:intergenic | 30.0% |
| !! | GAAGTTGATGAATCATAGTA+GGG | - | chr4_2:58622996-58623015 | None:intergenic | 30.0% |
| !! | TGAAGTTGATGAATCATAGT+AGG | - | chr4_2:58622997-58623016 | None:intergenic | 30.0% |
| GTTGGAATAATTGGTCATAA+AGG | - | chr4_2:58623264-58623283 | None:intergenic | 30.0% | |
| GATATGAAAAGGTGAAAGAA+TGG | - | chr4_2:58623380-58623399 | None:intergenic | 30.0% | |
| AATGCAGAAACGATATGAAA+AGG | - | chr4_2:58623391-58623410 | None:intergenic | 30.0% | |
| TTAGCTAGCATATGGTTTAT+AGG | + | chr4_2:58623464-58623483 | Msa0610750:intron | 30.0% | |
| TAGCTAGCATATGGTTTATA+GGG | + | chr4_2:58623465-58623484 | Msa0610750:intron | 30.0% | |
| TATGGTTTATAGGGTTTGAT+TGG | + | chr4_2:58623474-58623493 | Msa0610750:intron | 30.0% | |
| ! | ATTTAGAGTATATCTCGGTT+AGG | + | chr4_2:58623534-58623553 | Msa0610750:intron | 30.0% |
| ATGTATTGTGTAAACACGAA+AGG | - | chr4_2:58623842-58623861 | None:intergenic | 30.0% | |
| AGAAATCCAACATAAAGAAG+TGG | - | chr4_2:58623966-58623985 | None:intergenic | 30.0% | |
| GGTGTGATTAAAATGGTATA+TGG | + | chr4_2:58624017-58624036 | Msa0610750:intron | 30.0% | |
| ! | GGCATGTTTTCATCAATAAA+AGG | - | chr4_2:58624205-58624224 | None:intergenic | 30.0% |
| TTAGATAGAATCCACTTGTT+TGG | + | chr4_2:58624605-58624624 | Msa0610750:intron | 30.0% | |
| ! | TAGTTTTTCCCTTCAGAAAA+GGG | - | chr4_2:58624634-58624653 | None:intergenic | 30.0% |
| ACAACGATTATGTAAGTATG+TGG | + | chr4_2:58624686-58624705 | Msa0610750:intron | 30.0% | |
| CAACGATTATGTAAGTATGT+GGG | + | chr4_2:58624687-58624706 | Msa0610750:intron | 30.0% | |
| ACATCCTTTAGATATCATCA+TGG | + | chr4_2:58624986-58625005 | Msa0610750:intron | 30.0% | |
| ACATCCATGATGATATCTAA+AGG | - | chr4_2:58624993-58625012 | None:intergenic | 30.0% | |
| ACATTAAAACCGATGTATGT+CGG | - | chr4_2:58625045-58625064 | None:intergenic | 30.0% | |
| GATAAACAATTTGTGGTTGT+TGG | - | chr4_2:58625095-58625114 | None:intergenic | 30.0% | |
| GTCCGTTAGTTAAAAATAGA+TGG | - | chr4_2:58625221-58625240 | None:intergenic | 30.0% | |
| AAGCAAAGTATATGAAAGGA+AGG | - | chr4_2:58625399-58625418 | None:intergenic | 30.0% | |
| CTATAACTATATGTGCACTA+TGG | - | chr4_2:58625780-58625799 | None:intergenic | 30.0% | |
| CATAGTGCACATATAGTTAT+AGG | + | chr4_2:58625778-58625797 | Msa0610750:intron | 30.0% | |
| ! | CAATAAACTGGACATGTTTT+CGG | + | chr4_2:58625923-58625942 | Msa0610750:intron | 30.0% |
| AAACAGCTATTGAGAAAGAA+AGG | - | chr4_2:58626306-58626325 | None:intergenic | 30.0% | |
| CAAAACTACAAGATCAACAA+TGG | - | chr4_2:58626404-58626423 | None:intergenic | 30.0% | |
| ! | TTTTAAGCTGAAATGGGAAA+AGG | - | chr4_2:58626474-58626493 | None:intergenic | 30.0% |
| !!! | TAGCAGTTTTAAGCTGAAAT+GGG | - | chr4_2:58626480-58626499 | None:intergenic | 30.0% |
| ATATTTCCATGCAAAACTTG+CGG | - | chr4_2:58626554-58626573 | None:intergenic | 30.0% | |
| ! | GTTTTGCATGGAAATATTCA+AGG | + | chr4_2:58626557-58626576 | Msa0610750:CDS | 30.0% |
| GATGTTTAGGCATAGTAAAA+GGG | - | chr4_2:58626625-58626644 | None:intergenic | 30.0% | |
| TGATGTTTAGGCATAGTAAA+AGG | - | chr4_2:58626626-58626645 | None:intergenic | 30.0% | |
| ! | TTCATACGATGATGATGTTT+AGG | - | chr4_2:58626638-58626657 | None:intergenic | 30.0% |
| TAAACATCATCATCGTATGA+AGG | + | chr4_2:58626637-58626656 | Msa0610750:intron | 30.0% | |
| TTCTACCTGAAGTTTAATGT+AGG | + | chr4_2:58626696-58626715 | Msa0610750:intron | 30.0% | |
| GTACATGAAATACTTTCGTA+CGG | - | chr4_2:58626736-58626755 | None:intergenic | 30.0% | |
| ! | TTCGATCGGATTGTTCTTTT+CGG | - | chr4_2:58621209-58621228 | None:intergenic | 35.0% |
| !!! | AACGGGTTACGGTTTTTATT+GGG | + | chr4_2:58621297-58621316 | Msa0610750:intron | 35.0% |
| AAACTAGAGTAGAATGATCG+TGG | + | chr4_2:58621463-58621482 | Msa0610750:intron | 35.0% | |
| TGAAGAAAAGAGAACTGTGT+TGG | + | chr4_2:58621581-58621600 | Msa0610750:intron | 35.0% | |
| GTTCTCAGATGAAAGAGAAA+GGG | - | chr4_2:58621667-58621686 | None:intergenic | 35.0% | |
| !!! | TCCTTCCATCTGTTGTTTTT+AGG | + | chr4_2:58621918-58621937 | Msa0610750:intron | 35.0% |
| !!! | CCTTCCATCTGTTGTTTTTA+GGG | + | chr4_2:58621919-58621938 | Msa0610750:intron | 35.0% |
| !!! | GTTTTTAGGGTTATTTGCAG+TGG | + | chr4_2:58621932-58621951 | Msa0610750:intron | 35.0% |
| !!! | AGTGGGATTGTGTTGTTTTA+AGG | + | chr4_2:58621950-58621969 | Msa0610750:intron | 35.0% |
| !!! | GTGGGATTGTGTTGTTTTAA+GGG | + | chr4_2:58621951-58621970 | Msa0610750:intron | 35.0% |
| ATAGTGAAAGATGAGACATG+TGG | + | chr4_2:58622653-58622672 | Msa0610750:intron | 35.0% | |
| TTGAAATGGATAACGTAGGA+CGG | - | chr4_2:58622876-58622895 | None:intergenic | 35.0% | |
| ! | CAGTTTGAAATGGATAACGT+AGG | - | chr4_2:58622880-58622899 | None:intergenic | 35.0% |
| ! | TCACCTTTTGCAGTTTGAAA+TGG | - | chr4_2:58622890-58622909 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCATCGGATACAG+CGG | + | chr4_2:58622951-58622970 | Msa0610750:intron | 35.0% |
| CTTGGTGAAGTTGGAATAAT+TGG | - | chr4_2:58623273-58623292 | None:intergenic | 35.0% | |
| GTTGTAGTGAGATGCTTATT+TGG | + | chr4_2:58623434-58623453 | Msa0610750:intron | 35.0% | |
| ! | GATGTTTGTTAGCTAGCATA+TGG | + | chr4_2:58623456-58623475 | Msa0610750:intron | 35.0% |
| ATAGGGTTTGATTGGTAGAA+AGG | + | chr4_2:58623482-58623501 | Msa0610750:intron | 35.0% | |
| ! | AAGGTTATTTCATGTGTGCT+TGG | + | chr4_2:58623501-58623520 | Msa0610750:intron | 35.0% |
| ACTTGCAAATACTACTATCC+CGG | - | chr4_2:58623602-58623621 | None:intergenic | 35.0% | |
| ! | ACTCCAGCTTATGGAAATTT+TGG | + | chr4_2:58623733-58623752 | Msa0610750:intron | 35.0% |
| ! | CTCCAGCTTATGGAAATTTT+GGG | + | chr4_2:58623734-58623753 | Msa0610750:intron | 35.0% |
| AACCCAAAATTTCCATAAGC+TGG | - | chr4_2:58623739-58623758 | None:intergenic | 35.0% | |
| !! | TGAAATGTGTTGATTGTCAC+TGG | + | chr4_2:58624175-58624194 | Msa0610750:intron | 35.0% |
| CGCTGTAACAGTTTAACATT+TGG | - | chr4_2:58624226-58624245 | None:intergenic | 35.0% | |
| TAGCACTTAGCACTATTACA+TGG | + | chr4_2:58624381-58624400 | Msa0610750:intron | 35.0% | |
| ! | GTAGTTTTTCCCTTCAGAAA+AGG | - | chr4_2:58624635-58624654 | None:intergenic | 35.0% |
| ! | CTAACTTCTAAGAAAAGCAG+TGG | - | chr4_2:58624743-58624762 | None:intergenic | 35.0% |
| TCAGTAAATTCTGACTTCCT+TGG | + | chr4_2:58624856-58624875 | Msa0610750:intron | 35.0% | |
| TCTAAAGGATGTTCTGATGA+TGG | - | chr4_2:58624978-58624997 | None:intergenic | 35.0% | |
| TATGTTTCACCGACATACAT+CGG | + | chr4_2:58625033-58625052 | Msa0610750:intron | 35.0% | |
| ! | TTTAGTTTCTCTTACTTGGG+TGG | + | chr4_2:58625577-58625596 | Msa0610750:intron | 35.0% |
| ! | GAAAGATTTGGGATGTTTCA+AGG | - | chr4_2:58625971-58625990 | None:intergenic | 35.0% |
| TTGCTTAACATGTGCCTTAA+GGG | + | chr4_2:58626175-58626194 | Msa0610750:intron | 35.0% | |
| GGAGCTTAGCATCTTAATAA+TGG | + | chr4_2:58626251-58626270 | Msa0610750:intron | 35.0% | |
| TCTTTCTCAATAGCTGTTTG+TGG | + | chr4_2:58626307-58626326 | Msa0610750:intron | 35.0% | |
| AAGAGAAAAGGATGGAGAAA+AGG | - | chr4_2:58626352-58626371 | None:intergenic | 35.0% | |
| AAGAGGAAAAGAGAAAAGGA+TGG | - | chr4_2:58626360-58626379 | None:intergenic | 35.0% | |
| !!! | CTAGCAGTTTTAAGCTGAAA+TGG | - | chr4_2:58626481-58626500 | None:intergenic | 35.0% |
| CAAAGCCTACATTAAACTTC+AGG | - | chr4_2:58626704-58626723 | None:intergenic | 35.0% | |
| ! | TTTTACTATTCAACAGGTGC+TGG | + | chr4_2:58626790-58626809 | Msa0610750:intron | 35.0% |
| AAATACACCTCCAGCTAAAA+AGG | - | chr4_2:58626821-58626840 | None:intergenic | 35.0% | |
| !!! | TTTTTAGCTGGAGGTGTATT+TGG | + | chr4_2:58626820-58626839 | Msa0610750:CDS | 35.0% |
| !! | TTTTAGCTGGAGGTGTATTT+GGG | + | chr4_2:58626821-58626840 | Msa0610750:CDS | 35.0% |
| ATCATGCACTTCAACTTTAC+AGG | + | chr4_2:58626869-58626888 | Msa0610750:CDS | 35.0% | |
| TCATGCACTTCAACTTTACA+GGG | + | chr4_2:58626870-58626889 | Msa0610750:CDS | 35.0% | |
| TCAGCGAACATAAATTGCAT+TGG | - | chr4_2:58627033-58627052 | None:intergenic | 35.0% | |
| AAGGAAAACAACACAACAGA+GGG | - | chr4_2:58627136-58627155 | None:intergenic | 35.0% | |
| AAAGGAAAACAACACAACAG+AGG | - | chr4_2:58627137-58627156 | None:intergenic | 35.0% | |
| TTAATTGAACCTATGAGGGG+TGG | + | chr4_2:58621154-58621173 | Msa0610750:intron | 40.0% | |
| GAAAAAACCGACGTCATGAA+CGG | - | chr4_2:58621264-58621283 | None:intergenic | 40.0% | |
| !!! | GTTCATGACGTCGGTTTTTT+CGG | + | chr4_2:58621263-58621282 | Msa0610750:intron | 40.0% |
| !!! | TTCATGACGTCGGTTTTTTC+GGG | + | chr4_2:58621264-58621283 | Msa0610750:intron | 40.0% |
| !!! | CAACGGGTTACGGTTTTTAT+TGG | + | chr4_2:58621296-58621315 | Msa0610750:intron | 40.0% |
| !! | TAAAGATAAAAGAGGCGCCA+TGG | + | chr4_2:58621545-58621564 | Msa0610750:intron | 40.0% |
| ! | CTTTTCTTCACCACAGCAAA+TGG | - | chr4_2:58621571-58621590 | None:intergenic | 40.0% |
| CGTTCTCAGATGAAAGAGAA+AGG | - | chr4_2:58621668-58621687 | None:intergenic | 40.0% | |
| ACAGATGGAAGGAAAACTCA+TGG | - | chr4_2:58621911-58621930 | None:intergenic | 40.0% | |
| CCCTAAAAACAACAGATGGA+AGG | - | chr4_2:58621922-58621941 | None:intergenic | 40.0% | |
| CGCTGGATATTACAAGCTTA+TGG | - | chr4_2:58622014-58622033 | None:intergenic | 40.0% | |
| ! | ATTTGTTAGGCTACTGTGAC+AGG | + | chr4_2:58622165-58622184 | Msa0610750:intron | 40.0% |
| GAGCCAGACAAAAAAGTTTG+GGG | - | chr4_2:58622526-58622545 | None:intergenic | 40.0% | |
| GGAGCCAGACAAAAAAGTTT+GGG | - | chr4_2:58622527-58622546 | None:intergenic | 40.0% | |
| ! | CTTTTCTCTCTGCACCAAAA+TGG | + | chr4_2:58622600-58622619 | Msa0610750:intron | 40.0% |
| TAACTATTATCGGTCGGTGT+TGG | + | chr4_2:58622819-58622838 | Msa0610750:intron | 40.0% | |
| ! | AACTATTATCGGTCGGTGTT+GGG | + | chr4_2:58622820-58622839 | Msa0610750:intron | 40.0% |
| GAAAAAAACAATGTCACGGG+TGG | - | chr4_2:58622940-58622959 | None:intergenic | 40.0% | |
| TTGATGAATCATAGTAGGGG+TGG | - | chr4_2:58622992-58623011 | None:intergenic | 40.0% | |
| AGTGAAACAAGTGAAGGTGA+TGG | + | chr4_2:58623166-58623185 | Msa0610750:exon | 40.0% | |
| ! | GGAAGGCTACAAAGAGTTTT+GGG | + | chr4_2:58623226-58623245 | Msa0610750:CDS | 40.0% |
| ! | GAAGGCTACAAAGAGTTTTG+GGG | + | chr4_2:58623227-58623246 | Msa0610750:CDS | 40.0% |
| AGAGTTAGACCATGAAGTGA+GGG | - | chr4_2:58623306-58623325 | None:intergenic | 40.0% | |
| ATGGTCTAACTCTGATGTTG+AGG | + | chr4_2:58623313-58623332 | Msa0610750:CDS | 40.0% | |
| !! | TGAAAGAATGGTGTTACCAC+GGG | - | chr4_2:58623368-58623387 | None:intergenic | 40.0% |
| !! | GTGAAAGAATGGTGTTACCA+CGG | - | chr4_2:58623369-58623388 | None:intergenic | 40.0% |
| CTTTGCGGAGTTAAATGTAG+AGG | + | chr4_2:58623765-58623784 | Msa0610750:intron | 40.0% | |
| TCATGCTTCTGTTCCTTCAT+TGG | - | chr4_2:58624328-58624347 | None:intergenic | 40.0% | |
| ATGGTGCATGTCTCTTAAGT+TGG | + | chr4_2:58624457-58624476 | Msa0610750:intron | 40.0% | |
| ATGCTTAGACAGGTCTTTGA+CGG | + | chr4_2:58624540-58624559 | Msa0610750:intron | 40.0% | |
| TAACTCGCAATAGATGCAAG+TGG | + | chr4_2:58624577-58624596 | Msa0610750:intron | 40.0% | |
| ! | TTTGGTTGCCCTTTTCTGAA+GGG | + | chr4_2:58624623-58624642 | Msa0610750:intron | 40.0% |
| CTGACTTCCTTGGAGATATT+TGG | + | chr4_2:58624866-58624885 | Msa0610750:intron | 40.0% | |
| ACAGCATCCAAATATCTCCA+AGG | - | chr4_2:58624876-58624895 | None:intergenic | 40.0% | |
| !! | AAGGATGTTCTGATGATGGA+AGG | - | chr4_2:58624974-58624993 | None:intergenic | 40.0% |
| TCGGTGAAACATACGAATGA+AGG | - | chr4_2:58625026-58625045 | None:intergenic | 40.0% | |
| TTGTTTCATCTGCGATGCAT+AGG | - | chr4_2:58625375-58625394 | None:intergenic | 40.0% | |
| ! | CACAATGATGGAGAGATAGA+TGG | - | chr4_2:58625446-58625465 | None:intergenic | 40.0% |
| CATCTATCTCTCCATCATTG+TGG | + | chr4_2:58625444-58625463 | Msa0610750:intron | 40.0% | |
| AAGTCCATCATCCACAATGA+TGG | - | chr4_2:58625458-58625477 | None:intergenic | 40.0% | |
| TATGTGCACTATGGGTAACT+TGG | - | chr4_2:58625771-58625790 | None:intergenic | 40.0% | |
| GTTGCTTAACATGTGCCTTA+AGG | + | chr4_2:58626174-58626193 | Msa0610750:intron | 40.0% | |
| CAGCTATTGAGAAAGAAAGG+AGG | - | chr4_2:58626303-58626322 | None:intergenic | 40.0% | |
| !! | TGTTATCTGAAGTGCTGCTT+GGG | + | chr4_2:58626442-58626461 | Msa0610750:intron | 40.0% |
| ! | TATTCACCGCAAGTTTTGCA+TGG | + | chr4_2:58626545-58626564 | Msa0610750:CDS | 40.0% |
| ACTTTACAGGGTAGACACAT+TGG | + | chr4_2:58626882-58626901 | Msa0610750:CDS | 40.0% | |
| TCACGTAGATCGCTACTGAT+CGG | + | chr4_2:58621048-58621067 | Msa0610750:five_prime_UTR | 45.0% | |
| GAACAATCCGATCGAAACCA+CGG | + | chr4_2:58621213-58621232 | Msa0610750:intron | 45.0% | |
| ! | GGGTTACGGTTTTTATTGGG+TGG | + | chr4_2:58621300-58621319 | Msa0610750:intron | 45.0% |
| TGATCGTGGAAGATGAAGAG+AGG | + | chr4_2:58621477-58621496 | Msa0610750:intron | 45.0% | |
| TAATGTTCGGTCGCTAGGTT+GGG | - | chr4_2:58621707-58621726 | None:intergenic | 45.0% | |
| !! | GTGGTGGTGGATGTAATGTT+CGG | - | chr4_2:58621720-58621739 | None:intergenic | 45.0% |
| ! | GAAAATGGAGGAGTATGCAG+CGG | - | chr4_2:58621790-58621809 | None:intergenic | 45.0% |
| ! | ACAAAAAAGTTTGGGGTGGC+GGG | - | chr4_2:58622519-58622538 | None:intergenic | 45.0% |
| ! | GACAAAAAAGTTTGGGGTGG+CGG | - | chr4_2:58622520-58622539 | None:intergenic | 45.0% |
| CCAGACAAAAAAGTTTGGGG+TGG | - | chr4_2:58622523-58622542 | None:intergenic | 45.0% | |
| !!! | CCACCCCAAACTTTTTTGTC+TGG | + | chr4_2:58622520-58622539 | Msa0610750:intron | 45.0% |
| CGGAGCCAGACAAAAAAGTT+TGG | - | chr4_2:58622528-58622547 | None:intergenic | 45.0% | |
| TTGTTTGTGTGAGGGAGAGT+GGG | + | chr4_2:58622555-58622574 | Msa0610750:intron | 45.0% | |
| AGGGAGAGTGGGTAAAGAAA+TGG | + | chr4_2:58622566-58622585 | Msa0610750:intron | 45.0% | |
| GTGGGTAAAGAAATGGAGTG+AGG | + | chr4_2:58622573-58622592 | Msa0610750:intron | 45.0% | |
| AGATGAGACATGTGGTGTGA+TGG | + | chr4_2:58622661-58622680 | Msa0610750:intron | 45.0% | |
| GGAAACTAGCACAGAGTAGA+GGG | - | chr4_2:58622759-58622778 | None:intergenic | 45.0% | |
| AGGAAACTAGCACAGAGTAG+AGG | - | chr4_2:58622760-58622779 | None:intergenic | 45.0% | |
| TGGATAACGTAGGACGGAAT+CGG | - | chr4_2:58622870-58622889 | None:intergenic | 45.0% | |
| ATGTCACGGGTGGTTTAGTT+CGG | - | chr4_2:58622930-58622949 | None:intergenic | 45.0% | |
| CTGCAGAGTGAAACAAGTGA+AGG | + | chr4_2:58623160-58623179 | Msa0610750:intron | 45.0% | |
| ATTCGTCTTCCCAGTCATTC+TGG | + | chr4_2:58623204-58623223 | Msa0610750:CDS | 45.0% | |
| TTCGTCTTCCCAGTCATTCT+GGG | + | chr4_2:58623205-58623224 | Msa0610750:CDS | 45.0% | |
| ! | GGGAAGGCTACAAAGAGTTT+TGG | + | chr4_2:58623225-58623244 | Msa0610750:CDS | 45.0% |
| ! | CTTATCACGCTTGGTGAAGT+TGG | - | chr4_2:58623282-58623301 | None:intergenic | 45.0% |
| GAGTTAGACCATGAAGTGAG+GGG | - | chr4_2:58623305-58623324 | None:intergenic | 45.0% | |
| CAGAGTTAGACCATGAAGTG+AGG | - | chr4_2:58623307-58623326 | None:intergenic | 45.0% | |
| ATCGCTTCTGATCCTGTTCA+TGG | + | chr4_2:58623341-58623360 | Msa0610750:CDS | 45.0% | |
| ATCTCGGTTAGGAACTTTGC+TGG | + | chr4_2:58623545-58623564 | Msa0610750:intron | 45.0% | |
| !! | CCATAAGCTGGAGTTGATGA+AGG | - | chr4_2:58623727-58623746 | None:intergenic | 45.0% |
| CCTTCATCAACTCCAGCTTA+TGG | + | chr4_2:58623724-58623743 | Msa0610750:intron | 45.0% | |
| !! | GGTGTGCCACTTCTTTATGT+TGG | + | chr4_2:58623957-58623976 | Msa0610750:intron | 45.0% |
| GTCACAGTCAATGCTTAGAC+AGG | + | chr4_2:58624530-58624549 | Msa0610750:intron | 45.0% | |
| !! | GTCTTTGACGGCTTGTTATG+TGG | + | chr4_2:58624552-58624571 | Msa0610750:intron | 45.0% |
| GAAAAGGGCAACCAAACAAG+TGG | - | chr4_2:58624619-58624638 | None:intergenic | 45.0% | |
| ! | GTTTGGTTGCCCTTTTCTGA+AGG | + | chr4_2:58624622-58624641 | Msa0610750:intron | 45.0% |
| CTGACTCTGCATTCGTATAG+TGG | - | chr4_2:58624840-58624859 | None:intergenic | 45.0% | |
| ATTTGATCAACCCTCCACAC+TGG | + | chr4_2:58625247-58625266 | Msa0610750:intron | 45.0% | |
| ! | ATTTTGCGGCTTTCCTACAG+TGG | + | chr4_2:58625315-58625334 | Msa0610750:intron | 45.0% |
| CTCTCCATCATTGTGGATGA+TGG | + | chr4_2:58625451-58625470 | Msa0610750:intron | 45.0% | |
| TGACTGTGTATCACTCCTCA+CGG | + | chr4_2:58625816-58625835 | Msa0610750:intron | 45.0% | |
| ! | GGACATGTTTTCGGTACCAA+CGG | + | chr4_2:58625932-58625951 | Msa0610750:intron | 45.0% |
| ! | TTTTCGGTACCAACGGTGAT+TGG | + | chr4_2:58625939-58625958 | Msa0610750:intron | 45.0% |
| AATGCTAACTTGAGCCCTCA+AGG | + | chr4_2:58626044-58626063 | Msa0610750:intron | 45.0% | |
| ATGCTAACTTGAGCCCTCAA+GGG | + | chr4_2:58626045-58626064 | Msa0610750:intron | 45.0% | |
| TCCTTAACATGTGCCCTTGA+GGG | - | chr4_2:58626061-58626080 | None:intergenic | 45.0% | |
| TTCCTTAACATGTGCCCTTG+AGG | - | chr4_2:58626062-58626081 | None:intergenic | 45.0% | |
| ! | CATGCTAACTTGTGCCCTTA+AGG | - | chr4_2:58626192-58626211 | None:intergenic | 45.0% |
| !! | CTGTTATCTGAAGTGCTGCT+TGG | + | chr4_2:58626441-58626460 | Msa0610750:intron | 45.0% |
| GCTAGAGAAGCAGTGCAATA+TGG | + | chr4_2:58626496-58626515 | Msa0610750:CDS | 45.0% | |
| GGTGTATTTGGGTGGACATA+TGG | + | chr4_2:58626832-58626851 | Msa0610750:CDS | 45.0% | |
| !! | AGTTTCTGGAGTGGTGGAAA+AGG | + | chr4_2:58626917-58626936 | Msa0610750:CDS | 45.0% |
| ACAGCTTCAATTCCCTCCTT+CGG | - | chr4_2:58626947-58626966 | None:intergenic | 45.0% | |
| GAATTGAAGCTGTTTGCGTC+TGG | + | chr4_2:58626954-58626973 | Msa0610750:exon | 45.0% | |
| CACAACAGAGGGAGGAAAAA+TGG | - | chr4_2:58627125-58627144 | None:intergenic | 45.0% | |
| GAAAACAACACAACAGAGGG+AGG | - | chr4_2:58627133-58627152 | None:intergenic | 45.0% | |
| !! | TATTAATTAATAACTATTAT+CGG | + | chr4_2:58622809-58622828 | Msa0610750:intron | 5.0% |
| !! | AAATTAAACAAAAATTATAA+TGG | + | chr4_2:58626001-58626020 | Msa0610750:intron | 5.0% |
| !!! | TTTATTTATATTTTTAAAAG+AGG | - | chr4_2:58626377-58626396 | None:intergenic | 5.0% |
| CAGTAGCGATCTACGTGAGA+CGG | - | chr4_2:58621046-58621065 | None:intergenic | 50.0% | |
| ACCTATGAGGGGTGGACAAT+CGG | + | chr4_2:58621162-58621181 | Msa0610750:intron | 50.0% | |
| ! | GGATTGTTCTTTTCGGTCCG+CGG | - | chr4_2:58621202-58621221 | None:intergenic | 50.0% |
| AATCCGATCGAAACCACGGT+TGG | + | chr4_2:58621217-58621236 | Msa0610750:intron | 50.0% | |
| TGTCCAACCGTGGTTTCGAT+CGG | - | chr4_2:58621223-58621242 | None:intergenic | 50.0% | |
| GGGCTTAAATTGTCCAACCG+TGG | - | chr4_2:58621233-58621252 | None:intergenic | 50.0% | |
| AAACCGACGTCATGAACGGA+CGG | - | chr4_2:58621260-58621279 | None:intergenic | 50.0% | |
| !!! | ATGACGTCGGTTTTTTCGGG+TGG | + | chr4_2:58621267-58621286 | Msa0610750:intron | 50.0% |
| !!! | TTTTCGGGTGGCGGTTTCAA+CGG | + | chr4_2:58621279-58621298 | Msa0610750:intron | 50.0% |
| TTCACCACAGCAAATGGCCA+TGG | - | chr4_2:58621565-58621584 | None:intergenic | 50.0% | |
| GTAATGTTCGGTCGCTAGGT+TGG | - | chr4_2:58621708-58621727 | None:intergenic | 50.0% | |
| GGATGTAATGTTCGGTCGCT+AGG | - | chr4_2:58621712-58621731 | None:intergenic | 50.0% | |
| CTGTTATCACTTTGCAGCGC+TGG | - | chr4_2:58622031-58622050 | None:intergenic | 50.0% | |
| CTCACACAAACAACCAGTGG+CGG | - | chr4_2:58622548-58622567 | None:intergenic | 50.0% | |
| ! | GCCACTGGTTGTTTGTGTGA+GGG | + | chr4_2:58622547-58622566 | Msa0610750:intron | 50.0% |
| TCCCTCACACAAACAACCAG+TGG | - | chr4_2:58622551-58622570 | None:intergenic | 50.0% | |
| GTTGTTTGTGTGAGGGAGAG+TGG | + | chr4_2:58622554-58622573 | Msa0610750:intron | 50.0% | |
| TGAGACATGTGGTGTGATGG+TGG | + | chr4_2:58622664-58622683 | Msa0610750:intron | 50.0% | |
| ATACTGACACCACACGTCTC+AGG | - | chr4_2:58622695-58622714 | None:intergenic | 50.0% | |
| !! | TTATCGGTCGGTGTTGGGTT+TGG | + | chr4_2:58622825-58622844 | Msa0610750:intron | 50.0% |
| AACGTAGGACGGAATCGGAT+TGG | - | chr4_2:58622865-58622884 | None:intergenic | 50.0% | |
| ! | TGTCACGGGTGGTTTAGTTC+GGG | - | chr4_2:58622929-58622948 | None:intergenic | 50.0% |
| TCATCGGATACAGCGGACAT+CGG | + | chr4_2:58622958-58622977 | Msa0610750:intron | 50.0% | |
| ! | TCTTCCCAGTCATTCTGGGA+AGG | + | chr4_2:58623209-58623228 | Msa0610750:CDS | 50.0% |
| GTAGCCTTCCCAGAATGACT+GGG | - | chr4_2:58623216-58623235 | None:intergenic | 50.0% | |
| TGTAGCCTTCCCAGAATGAC+TGG | - | chr4_2:58623217-58623236 | None:intergenic | 50.0% | |
| GTGATAAGCCCCTCACTTCA+TGG | + | chr4_2:58623294-58623313 | Msa0610750:CDS | 50.0% | |
| TGCGTTTGATGTCTTGCTGC+CGG | + | chr4_2:58623575-58623594 | Msa0610750:intron | 50.0% | |
| CAAATACTACTATCCCGGCC+CGG | - | chr4_2:58623597-58623616 | None:intergenic | 50.0% | |
| !! | CGAAAGGAGTGCTGTATCAC+TGG | - | chr4_2:58623826-58623845 | None:intergenic | 50.0% |
| GGAAGACACTCAAGTGTGCT+TGG | + | chr4_2:58623906-58623925 | Msa0610750:intron | 50.0% | |
| GCAGTGGAACAGTTCTTTCG+TGG | - | chr4_2:58624727-58624746 | None:intergenic | 50.0% | |
| ATCACTCCTCACGGTAGTTG+TGG | + | chr4_2:58625825-58625844 | Msa0610750:intron | 50.0% | |
| ATAGAGCCACAACTACCGTG+AGG | - | chr4_2:58625834-58625853 | None:intergenic | 50.0% | |
| AGGCAAATGCCAATCACCGT+TGG | - | chr4_2:58625951-58625970 | None:intergenic | 50.0% | |
| ! | GCAGTGCAATATGGTCTTGC+AGG | + | chr4_2:58626505-58626524 | Msa0610750:CDS | 50.0% |
| !! | TGGTCTTGCAGGAAGTGCTT+TGG | + | chr4_2:58626516-58626535 | Msa0610750:CDS | 50.0% |
| !! | GGTCTTGCAGGAAGTGCTTT+GGG | + | chr4_2:58626517-58626536 | Msa0610750:CDS | 50.0% |
| !! | GCTGGTCTGTCCTTTTTAGC+TGG | + | chr4_2:58626808-58626827 | Msa0610750:CDS | 50.0% |
| !!! | GGTCTGTCCTTTTTAGCTGG+AGG | + | chr4_2:58626811-58626830 | Msa0610750:CDS | 50.0% |
| ! | TAGCTGGAGGTGTATTTGGG+TGG | + | chr4_2:58626824-58626843 | Msa0610750:CDS | 50.0% |
| !! | GGTAGACACATTGGCTTCTG+AGG | + | chr4_2:58626891-58626910 | Msa0610750:CDS | 50.0% |
| !! | GGCTTCTGAGGCTAAGTTTC+TGG | + | chr4_2:58626903-58626922 | Msa0610750:CDS | 50.0% |
| ! | CTGAGGCTAAGTTTCTGGAG+TGG | + | chr4_2:58626908-58626927 | Msa0610750:CDS | 50.0% |
| !! | AGGCTAAGTTTCTGGAGTGG+TGG | + | chr4_2:58626911-58626930 | Msa0610750:CDS | 50.0% |
| TGGTGGAAAAGGAAGACCGA+AGG | + | chr4_2:58626928-58626947 | Msa0610750:CDS | 50.0% | |
| TGGAAAAGGAAGACCGAAGG+AGG | + | chr4_2:58626931-58626950 | Msa0610750:CDS | 50.0% | |
| GGAAAAGGAAGACCGAAGGA+GGG | + | chr4_2:58626932-58626951 | Msa0610750:CDS | 50.0% | |
| CTTATGGACCTTGTGTGACG+AGG | + | chr4_2:58627199-58627218 | Msa0610750:three_prime_UTR | 50.0% | |
| ACCGATTGTCCACCCCTCAT+AGG | - | chr4_2:58621166-58621185 | None:intergenic | 55.0% | |
| ATGAGGGGTGGACAATCGGT+CGG | + | chr4_2:58621166-58621185 | Msa0610750:intron | 55.0% | |
| GGTGGACAATCGGTCGGATT+CGG | + | chr4_2:58621172-58621191 | Msa0610750:intron | 55.0% | |
| ! | GACAATCGGTCGGATTCGGT+CGG | + | chr4_2:58621176-58621195 | Msa0610750:intron | 55.0% |
| CGTCATGAACGGACGGGAAT+GGG | - | chr4_2:58621253-58621272 | None:intergenic | 55.0% | |
| ACGTCATGAACGGACGGGAA+TGG | - | chr4_2:58621254-58621273 | None:intergenic | 55.0% | |
| TTCCCGTCCGTTCATGACGT+CGG | + | chr4_2:58621254-58621273 | Msa0610750:intron | 55.0% | |
| AACCGACGTCATGAACGGAC+GGG | - | chr4_2:58621259-58621278 | None:intergenic | 55.0% | |
| !!! | ACGTCGGTTTTTTCGGGTGG+CGG | + | chr4_2:58621270-58621289 | Msa0610750:intron | 55.0% |
| ! | TTTCGGGTGGCGGTTTCAAC+GGG | + | chr4_2:58621280-58621299 | Msa0610750:intron | 55.0% |
| !! | GTGGCGGTTTCAACGGGTTA+CGG | + | chr4_2:58621286-58621305 | Msa0610750:intron | 55.0% |
| TGGATGGAGAAGGAGGAGAG+TGG | - | chr4_2:58621764-58621783 | None:intergenic | 55.0% | |
| !! | GAGTATGCAGCGGTGATGGA+TGG | - | chr4_2:58621780-58621799 | None:intergenic | 55.0% |
| !! | TTTTTGTCTGGCTCCGCCAC+TGG | + | chr4_2:58622532-58622551 | Msa0610750:intron | 55.0% |
| ! | CGCCACTGGTTGTTTGTGTG+AGG | + | chr4_2:58622546-58622565 | Msa0610750:intron | 55.0% |
| ! | GGTGGTTTAGTTCGGGTCTG+CGG | - | chr4_2:58622922-58622941 | None:intergenic | 55.0% |
| AGTGAGGGGCTTATCACGCT+TGG | - | chr4_2:58623291-58623310 | None:intergenic | 55.0% | |
| TGATCCTGTTCATGGACCCG+TGG | + | chr4_2:58623349-58623368 | Msa0610750:CDS | 55.0% | |
| GTTACCACGGGTCCATGAAC+AGG | - | chr4_2:58623356-58623375 | None:intergenic | 55.0% | |
| GCGTTTGATGTCTTGCTGCC+GGG | + | chr4_2:58623576-58623595 | Msa0610750:intron | 55.0% | |
| CGGCTTTCCTACAGTGGTAG+CGG | + | chr4_2:58625321-58625340 | Msa0610750:intron | 55.0% | |
| ! | GCCCTCAAGGGCACATGTTA+AGG | + | chr4_2:58626057-58626076 | Msa0610750:intron | 55.0% |
| ! | ACCTTGTGTGACGAGGCACT+TGG | + | chr4_2:58627206-58627225 | Msa0610750:three_prime_UTR | 55.0% |
| ACCAAGTGCCTCGTCACACA+AGG | - | chr4_2:58627210-58627229 | None:intergenic | 55.0% | |
| ! | GTGTGACGAGGCACTTGGTT+TGG | + | chr4_2:58627211-58627230 | Msa0610750:three_prime_UTR | 55.0% |
| GAGAAGGAGGAGAGTGGTCG+CGG | - | chr4_2:58621758-58621777 | None:intergenic | 60.0% | |
| !! | GCGGTGATGGATGGAGAAGG+AGG | - | chr4_2:58621771-58621790 | None:intergenic | 60.0% |
| !! | GCAGCGGTGATGGATGGAGA+AGG | - | chr4_2:58621774-58621793 | None:intergenic | 60.0% |
| ! | GGAGGAGTATGCAGCGGTGA+TGG | - | chr4_2:58621784-58621803 | None:intergenic | 60.0% |
| GTGGTGAGACCTGAGACGTG+TGG | + | chr4_2:58622683-58622702 | Msa0610750:intron | 60.0% | |
| !! | CGGTCGGTGTTGGGTTTGGA+TGG | + | chr4_2:58622829-58622848 | Msa0610750:intron | 60.0% |
| GTTCGGGTCTGCGGTTCAAC+AGG | - | chr4_2:58622913-58622932 | None:intergenic | 60.0% | |
| TTGATGTCTTGCTGCCGGGC+CGG | + | chr4_2:58623580-58623599 | Msa0610750:intron | 60.0% | |
| AGCGCAAGCACCAGTGTGGA+GGG | - | chr4_2:58625260-58625279 | None:intergenic | 60.0% | |
| ACTGGGACCGCTACCACTGT+AGG | - | chr4_2:58625331-58625350 | None:intergenic | 60.0% | |
| GTCACCACGAGTGTGCATCG+CGG | + | chr4_2:58625686-58625705 | Msa0610750:intron | 60.0% | |
| ! | GGCGCCATGGCCATTTGCTG+TGG | + | chr4_2:58621558-58621577 | Msa0610750:intron | 65.0% |
| ATCCACCACCACACCACCGC+TGG | + | chr4_2:58621728-58621747 | Msa0610750:five_prime_UTR | 65.0% | |
| TGATGTCTTGCTGCCGGGCC+GGG | + | chr4_2:58623581-58623600 | Msa0610750:intron | 65.0% | |
| CAGCGCAAGCACCAGTGTGG+AGG | - | chr4_2:58625261-58625280 | None:intergenic | 65.0% | |
| CTCCACACTGGTGCTTGCGC+TGG | + | chr4_2:58625259-58625278 | Msa0610750:intron | 65.0% | |
| GACCAGCGCAAGCACCAGTG+TGG | - | chr4_2:58625264-58625283 | None:intergenic | 65.0% | |
| ACCACGAGTGTGCATCGCGG+TGG | + | chr4_2:58625689-58625708 | Msa0610750:intron | 65.0% | |
| ACCACCGCGATGCACACTCG+TGG | - | chr4_2:58625693-58625712 | None:intergenic | 65.0% | |
| CACCAGCGGTGGTGTGGTGG+TGG | - | chr4_2:58621733-58621752 | None:intergenic | 70.0% | |
| GCTCACCAGCGGTGGTGTGG+TGG | - | chr4_2:58621736-58621755 | None:intergenic | 70.0% | |
| GAGTGGTCGCGGCTCACCAG+CGG | - | chr4_2:58621747-58621766 | None:intergenic | 70.0% | |
| ! | CGGTCGGATTCGGTCGGCCG+CGG | + | chr4_2:58621182-58621201 | Msa0610750:intron | 75.0% |
| GCGGCTCACCAGCGGTGGTG+TGG | - | chr4_2:58621739-58621758 | None:intergenic | 75.0% | |
| TGGTCGCGGCTCACCAGCGG+TGG | - | chr4_2:58621744-58621763 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 58620966 | 58627323 | 58620966 | ID=Msa0610750;Name=Msa0610750 |
| chr4_2 | mRNA | 58620966 | 58627323 | 58620966 | ID=Msa0610750-mRNA-1;Parent=Msa0610750;Name=Msa0610750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=357|1|1|1|0.5|0.6|5|363|147 |
| chr4_2 | exon | 58620966 | 58621069 | 58620966 | ID=Msa0610750-mRNA-1:exon:15444;Parent=Msa0610750-mRNA-1 |
| chr4_2 | exon | 58621636 | 58621869 | 58621636 | ID=Msa0610750-mRNA-1:exon:15445;Parent=Msa0610750-mRNA-1 |
| chr4_2 | exon | 58623166 | 58623370 | 58623166 | ID=Msa0610750-mRNA-1:exon:15446;Parent=Msa0610750-mRNA-1 |
| chr4_2 | exon | 58626487 | 58626589 | 58626487 | ID=Msa0610750-mRNA-1:exon:15447;Parent=Msa0610750-mRNA-1 |
| chr4_2 | exon | 58626806 | 58627323 | 58626806 | ID=Msa0610750-mRNA-1:exon:15448;Parent=Msa0610750-mRNA-1 |
| chr4_2 | five_prime_UTR | 58620966 | 58621069 | 58620966 | ID=Msa0610750-mRNA-1:five_prime_utr;Parent=Msa0610750-mRNA-1 |
| chr4_2 | five_prime_UTR | 58621636 | 58621869 | 58621636 | ID=Msa0610750-mRNA-1:five_prime_utr;Parent=Msa0610750-mRNA-1 |
| chr4_2 | five_prime_UTR | 58623166 | 58623184 | 58623166 | ID=Msa0610750-mRNA-1:five_prime_utr;Parent=Msa0610750-mRNA-1 |
| chr4_2 | CDS | 58623185 | 58623370 | 58623185 | ID=Msa0610750-mRNA-1:cds;Parent=Msa0610750-mRNA-1 |
| chr4_2 | CDS | 58626487 | 58626589 | 58626487 | ID=Msa0610750-mRNA-1:cds;Parent=Msa0610750-mRNA-1 |
| chr4_2 | CDS | 58626806 | 58626960 | 58626806 | ID=Msa0610750-mRNA-1:cds;Parent=Msa0610750-mRNA-1 |
| chr4_2 | three_prime_UTR | 58626961 | 58627323 | 58626961 | ID=Msa0610750-mRNA-1:three_prime_utr;Parent=Msa0610750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
