Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622360 | XP_024636842.1 | 96.368 | 413 | 15 | 0 | 1 | 413 | 1 | 413 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027540 | Msa0622360 | 0.821098 | 4.836007e-53 | -8.615850e-47 |
| Msa0044710 | Msa0622360 | 0.800982 | 1.115924e-48 | -8.615850e-47 |
| Msa0075310 | Msa0622360 | 0.825912 | 3.617710e-54 | -8.615850e-47 |
| Msa0622360 | Msa0677270 | 0.803465 | 3.442112e-49 | -8.615850e-47 |
| Msa0622360 | Msa0789280 | 0.801589 | 8.385279e-49 | -8.615850e-47 |
| Msa0622360 | Msa0789290 | 0.801603 | 8.328128e-49 | -8.615850e-47 |
| Msa0622360 | Msa0789300 | 0.803414 | 3.525375e-49 | -8.615850e-47 |
| Msa0622360 | Msa0837990 | 0.814003 | 1.922388e-51 | -8.615850e-47 |
| Msa0622360 | Msa0847200 | 0.803211 | 3.884307e-49 | -8.615850e-47 |
| Msa0622360 | Msa0890250 | 0.803840 | 2.876948e-49 | -8.615850e-47 |
| Msa0622360 | Msa1221560 | 0.804065 | 2.583393e-49 | -8.615850e-47 |
| Msa0622360 | Msa1242330 | 0.805415 | 1.349481e-49 | -8.615850e-47 |
| Msa0622360 | Msa1265960 | 0.803862 | 2.846391e-49 | -8.615850e-47 |
| Msa0622360 | Msa1428420 | 0.813354 | 2.670814e-51 | -8.615850e-47 |
| Msa0622360 | Msa1431000 | 0.805505 | 1.292675e-49 | -8.615850e-47 |
| Msa0168100 | Msa0622360 | 0.819441 | 1.159732e-52 | -8.615850e-47 |
| Msa0182930 | Msa0622360 | 0.826514 | 2.601347e-54 | -8.615850e-47 |
| Msa0200950 | Msa0622360 | -0.807364 | 5.241110e-50 | -8.615850e-47 |
| Msa0423360 | Msa0622360 | -0.801357 | 9.355401e-49 | -8.615850e-47 |
| Msa0240780 | Msa0622360 | 0.808108 | 3.642389e-50 | -8.615850e-47 |
| Msa0258670 | Msa0622360 | -0.820485 | 6.689202e-53 | -8.615850e-47 |
| Msa0288240 | Msa0622360 | 0.800483 | 1.410849e-48 | -8.615850e-47 |
| Msa0301180 | Msa0622360 | 0.813084 | 3.061902e-51 | -8.615850e-47 |
| Msa0320540 | Msa0622360 | 0.803111 | 4.074619e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622360 | MtrunA17_Chr4g0068311 | 95.673 | 416 | 15 | 1 | 1 | 413 | 1 | 416 | 0.0 | 770 |
| Msa0622360 | MtrunA17_Chr7g0270071 | 38.517 | 418 | 192 | 11 | 52 | 406 | 144 | 559 | 5.06e-64 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622360 | AT3G06660.1 | 42.318 | 371 | 180 | 11 | 55 | 407 | 66 | 420 | 3.80e-62 | 207 |
| Msa0622360 | AT2G47350.1 | 38.501 | 387 | 184 | 13 | 53 | 409 | 123 | 485 | 5.37e-55 | 189 |
| Msa0622360 | AT1G56460.1 | 62.676 | 142 | 53 | 0 | 262 | 403 | 359 | 500 | 9.59e-52 | 181 |
| Msa0622360 | AT1G56460.2 | 62.676 | 142 | 53 | 0 | 262 | 403 | 389 | 530 | 2.33e-51 | 181 |
| Msa0622360 | AT1G56460.3 | 49.194 | 124 | 63 | 0 | 262 | 385 | 359 | 482 | 1.22e-25 | 109 |
Find 103 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACCAAGTATCTTCTTAA+TGG | 0.185993 | 4_2:+74777541 | None:intergenic |
| AAGAAGCTTAAACTCAAATT+TGG | 0.203722 | 4_2:-74780388 | Msa0622360:CDS |
| TGCCTCCTTGATTATCCTTA+TGG | 0.237941 | 4_2:+74779360 | None:intergenic |
| TTGAGACAAAGAGGTCTATT+TGG | 0.253618 | 4_2:+74776884 | None:intergenic |
| TCTTTCAAAGATGTGCTATC+TGG | 0.292813 | 4_2:-74779152 | Msa0622360:CDS |
| AAGCTTCCCCTTTGCAGTCT+TGG | 0.297324 | 4_2:-74777040 | Msa0622360:CDS |
| AAACACTGTTCGATGGACTA+TGG | 0.302142 | 4_2:-74777351 | Msa0622360:CDS |
| TTGCGGGTGGAATGCTTTCT+TGG | 0.309324 | 4_2:+74779197 | None:intergenic |
| AAACCAACAGATTCCCTCTT+TGG | 0.309756 | 4_2:+74779227 | None:intergenic |
| CAATAACTCGCTTGCTCTTA+CGG | 0.314110 | 4_2:+74779480 | None:intergenic |
| GACTTGGAAGGTTTGTGATT+TGG | 0.321358 | 4_2:-74776932 | Msa0622360:three_prime_UTR |
| GAGAGGCCATGGGGACAAAT+TGG | 0.343442 | 4_2:-74779579 | Msa0622360:CDS |
| TCCTCTTTCTTCTTCCTAGC+AGG | 0.346247 | 4_2:+74777515 | None:intergenic |
| GCAATATTTCAGCATTACTT+TGG | 0.348288 | 4_2:-74780496 | Msa0622360:CDS |
| AGTGATGAATCAATATTAGA+AGG | 0.348762 | 4_2:-74779257 | Msa0622360:CDS |
| TGTACCTGTTAGACATTGTT+TGG | 0.357620 | 4_2:+74777273 | None:intergenic |
| AATAACTCGCTTGCTCTTAC+GGG | 0.375394 | 4_2:+74779481 | None:intergenic |
| CAATATTTCAGCATTACTTT+GGG | 0.379707 | 4_2:-74780495 | Msa0622360:CDS |
| TGAACAATTATGATTATTGC+GGG | 0.388645 | 4_2:+74779181 | None:intergenic |
| GATACAATTGTTGTTTCTGA+TGG | 0.391441 | 4_2:-74780433 | Msa0622360:CDS |
| TTGTAAGCATTAGTGCAGTT+TGG | 0.393740 | 4_2:+74777082 | None:intergenic |
| TCTTCCAAACAATGTCTAAC+AGG | 0.396325 | 4_2:-74777277 | Msa0622360:intron |
| ATTGATTCATCACTTGATGT+AGG | 0.433917 | 4_2:+74779266 | None:intergenic |
| CTGGACATCGTGGCTGTTTG+TGG | 0.450910 | 4_2:+74780753 | None:intergenic |
| CCGGAAAATCAAAACTTAAC+CGG | 0.454781 | 4_2:-74780800 | Msa0622360:five_prime_UTR |
| CAAACAAGTCGCAGTCCTAC+TGG | 0.455958 | 4_2:-74780828 | Msa0622360:five_prime_UTR |
| GTAACAACCAAGACTGCAAA+GGG | 0.456962 | 4_2:+74777033 | None:intergenic |
| CTTTCAAAGATGTGCTATCT+GGG | 0.463968 | 4_2:-74779151 | Msa0622360:CDS |
| TAGTCCTTGTAAATAGTAGT+TGG | 0.465481 | 4_2:-74776971 | Msa0622360:three_prime_UTR |
| AAAAGTTACTACGGTTCCAT+TGG | 0.465504 | 4_2:+74777325 | None:intergenic |
| GCACTAATGCTTACAAGTAT+CGG | 0.471350 | 4_2:-74777075 | Msa0622360:CDS |
| CACTAATGCTTACAAGTATC+GGG | 0.471763 | 4_2:-74777074 | Msa0622360:CDS |
| GGAAGGTTTGTGATTTGGCC+AGG | 0.475821 | 4_2:-74776927 | Msa0622360:three_prime_UTR |
| AGTGTTTGATGCTAGATTGA+AGG | 0.479209 | 4_2:+74777367 | None:intergenic |
| AAGCTTAAACTCAAATTTGG+AGG | 0.488206 | 4_2:-74780385 | Msa0622360:CDS |
| GCAAGCATTATTGACATCTC+AGG | 0.488483 | 4_2:-74779122 | Msa0622360:intron |
| AAAGTTACTACGGTTCCATT+GGG | 0.491895 | 4_2:+74777326 | None:intergenic |
| GACATTGTTTGGAAGATACT+TGG | 0.494136 | 4_2:+74777284 | None:intergenic |
| GGAAAAGATGAATAAGCAAA+GGG | 0.498530 | 4_2:-74777495 | Msa0622360:CDS |
| GAAGGCAGCTAGGGAGGCCG+AGG | 0.498972 | 4_2:-74777701 | Msa0622360:intron |
| TAGAAGGGAAGAAGCCAAAG+AGG | 0.498989 | 4_2:-74779241 | Msa0622360:CDS |
| AGGAAAGAACTATGAGGATC+GGG | 0.505453 | 4_2:-74779306 | Msa0622360:CDS |
| GTGTTTGATGCTAGATTGAA+GGG | 0.505698 | 4_2:+74777368 | None:intergenic |
| AACACTGTTCGATGGACTAT+GGG | 0.508722 | 4_2:-74777350 | Msa0622360:CDS |
| TCAAGCTGAGAAGGCAGCTA+GGG | 0.513394 | 4_2:-74777710 | Msa0622360:CDS |
| AAGAGGAGTTAGTCGCCATA+AGG | 0.518407 | 4_2:-74779375 | Msa0622360:CDS |
| GCATTGCGAGGATCGGAAGA+AGG | 0.519451 | 4_2:+74780337 | None:intergenic |
| TGAGAGATGTGCCATGGATG+TGG | 0.520572 | 4_2:-74779459 | Msa0622360:CDS |
| GCAAAGGGGAAGCTTTGACT+TGG | 0.523120 | 4_2:+74777048 | None:intergenic |
| TTGATTCATCACTTGATGTA+GGG | 0.523562 | 4_2:+74779267 | None:intergenic |
| TACCTTAGCATTGCGAGGAT+CGG | 0.526162 | 4_2:+74780330 | None:intergenic |
| GACATCGTGGCTGTTTGTGG+TGG | 0.526939 | 4_2:+74780756 | None:intergenic |
| AGGAAAAGATGAATAAGCAA+AGG | 0.527756 | 4_2:-74777496 | Msa0622360:CDS |
| ATGTCAATAATGCTTGCAAC+TGG | 0.529585 | 4_2:+74779128 | None:intergenic |
| GCGAGGATCGGAAGAAGGCT+TGG | 0.529979 | 4_2:+74780342 | None:intergenic |
| GACCTAAAATTAACTGGACA+TGG | 0.532237 | 4_2:+74776810 | None:intergenic |
| CGCAGTCCTACTGGACTCGC+CGG | 0.533159 | 4_2:-74780819 | Msa0622360:five_prime_UTR |
| GGTGTTTGTAAAGATGCATC+AGG | 0.533508 | 4_2:-74779326 | Msa0622360:CDS |
| GACAAAGAATTGAGACAAAG+AGG | 0.535720 | 4_2:+74776875 | None:intergenic |
| AAATCCAACTACTATTTACA+AGG | 0.541029 | 4_2:+74776967 | None:intergenic |
| CACAAACAGCCACGATGTCC+AGG | 0.541779 | 4_2:-74780752 | Msa0622360:intron |
| TTCAAGCTGAGAAGGCAGCT+AGG | 0.542356 | 4_2:-74777711 | Msa0622360:CDS |
| ATTGCATCACAATTAACCCT+AGG | 0.545996 | 4_2:+74780514 | None:intergenic |
| TGTGGTGGGTTTCCTTGCTA+CGG | 0.547187 | 4_2:+74780771 | None:intergenic |
| TTCCGATCCTCGCAATGCTA+AGG | 0.547346 | 4_2:-74780332 | Msa0622360:intron |
| CTGAACAATTATGATTATTG+CGG | 0.553988 | 4_2:+74779180 | None:intergenic |
| GCTTAACCAATTTGTCCCCA+TGG | 0.555543 | 4_2:+74779573 | None:intergenic |
| CAGGAAAGAACTATGAGGAT+CGG | 0.556559 | 4_2:-74779307 | Msa0622360:CDS |
| GAATCATTCACATAAAAGAA+AGG | 0.556754 | 4_2:-74779519 | Msa0622360:CDS |
| GTGATGAATCAATATTAGAA+GGG | 0.559877 | 4_2:-74779256 | Msa0622360:CDS |
| GCAGCCATTAAGAAGATACT+TGG | 0.560222 | 4_2:-74777545 | Msa0622360:CDS |
| ACATCGTGGCTGTTTGTGGT+GGG | 0.562752 | 4_2:+74780757 | None:intergenic |
| TCCTGCTAGGAAGAAGAAAG+AGG | 0.563807 | 4_2:-74777516 | Msa0622360:CDS |
| GATTTGGCCAGGAGGATATG+TGG | 0.565880 | 4_2:-74776916 | Msa0622360:three_prime_UTR |
| AGCTGAGAAGGCAGCTAGGG+AGG | 0.566469 | 4_2:-74777707 | Msa0622360:CDS |
| CGATGGACTATGGGTCCCAA+TGG | 0.570559 | 4_2:-74777341 | Msa0622360:CDS |
| AGTCGCCATAAGGATAATCA+AGG | 0.571017 | 4_2:-74779365 | Msa0622360:CDS |
| ATCGCTACACCCCACATCCA+TGG | 0.577901 | 4_2:+74779448 | None:intergenic |
| AAGGACTAACATGCAATCAC+AGG | 0.578464 | 4_2:+74776986 | None:intergenic |
| GAGAGATGTGCCATGGATGT+GGG | 0.578552 | 4_2:-74779458 | Msa0622360:CDS |
| AGAAGGGAAGAAGCCAAAGA+GGG | 0.585885 | 4_2:-74779240 | Msa0622360:CDS |
| TAGCATCAAACACTGTTCGA+TGG | 0.594632 | 4_2:-74777358 | Msa0622360:CDS |
| GACTTGTTTGTGATACAAAG+AGG | 0.609154 | 4_2:+74780841 | None:intergenic |
| TGTAACAACCAAGACTGCAA+AGG | 0.609478 | 4_2:+74777032 | None:intergenic |
| ACAATTATGATTATTGCGGG+TGG | 0.613619 | 4_2:+74779184 | None:intergenic |
| TACTTGGTCAAGATCCTGCT+AGG | 0.618102 | 4_2:-74777529 | Msa0622360:CDS |
| AACCGGAAAACACCGTAGCA+AGG | 0.618481 | 4_2:-74780783 | Msa0622360:five_prime_UTR |
| ACTTGTTTGTGATACAAAGA+GGG | 0.621565 | 4_2:+74780842 | None:intergenic |
| GCAAAGGGATGAAATAGCCA+AGG | 0.623359 | 4_2:-74777480 | Msa0622360:intron |
| ATTATTACCTTAGCATTGCG+AGG | 0.624163 | 4_2:+74780325 | None:intergenic |
| TGATGTGCCACGAAAACCTA+GGG | 0.628689 | 4_2:-74780530 | Msa0622360:CDS |
| AAGCCAAAGAGGGAATCTGT+TGG | 0.631087 | 4_2:-74779230 | Msa0622360:CDS |
| TGCATCAGGAAAGAACTATG+AGG | 0.633064 | 4_2:-74779312 | Msa0622360:CDS |
| GTGATGTGCCACGAAAACCT+AGG | 0.636600 | 4_2:-74780531 | Msa0622360:CDS |
| ACCTAAAATTAACTGGACAT+GGG | 0.651447 | 4_2:+74776811 | None:intergenic |
| CAAGGAGGCACAACAATGCG+TGG | 0.652937 | 4_2:-74779347 | Msa0622360:CDS |
| AGGTTTGTGATTTGGCCAGG+AGG | 0.665147 | 4_2:-74776924 | Msa0622360:three_prime_UTR |
| AGTTATTGAGAGATGTGCCA+TGG | 0.666299 | 4_2:-74779465 | Msa0622360:CDS |
| ACAGCTAATCAAGAAAGCTG+AGG | 0.671432 | 4_2:-74777752 | Msa0622360:CDS |
| AGAGATGTGCCATGGATGTG+GGG | 0.675260 | 4_2:-74779457 | Msa0622360:CDS |
| CGCCATAAGGATAATCAAGG+AGG | 0.678999 | 4_2:-74779362 | Msa0622360:CDS |
| AAAGGAAAACCTGGACATCG+TGG | 0.698714 | 4_2:+74780743 | None:intergenic |
| TAACAACCAAGACTGCAAAG+GGG | 0.763481 | 4_2:+74777034 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGATATTAAATGAAT+TGG | + | chr4_2:74777737-74777756 | None:intergenic | 10.0% |
| !! | ACAATTATTATAGATAAAAT+TGG | - | chr4_2:74779180-74779199 | Msa0622360:CDS | 10.0% |
| !!! | ACTAAAGAAATTTTGATTAA+TGG | - | chr4_2:74777145-74777164 | Msa0622360:intron | 15.0% |
| !! | AATATTGCAAATTGAAATTA+TGG | - | chr4_2:74777797-74777816 | Msa0622360:intron | 15.0% |
| !! | TATAGTTGCATTATTATATA+TGG | + | chr4_2:74778053-74778072 | None:intergenic | 15.0% |
| !!! | TTTTATCTTGTTTGATTTCA+TGG | + | chr4_2:74776874-74776893 | None:intergenic | 20.0% |
| !! | AAAAATCAACTTACGAAATT+AGG | + | chr4_2:74777101-74777120 | None:intergenic | 20.0% |
| !! | TTCTTTAGTAATTAGTACTA+TGG | + | chr4_2:74777134-74777153 | None:intergenic | 20.0% |
| !! | TTATGAATTAAGTGTATGTT+TGG | - | chr4_2:74777506-74777525 | Msa0622360:CDS | 20.0% |
| !!! | ATAGAAAAAATTGATTCTAG+AGG | - | chr4_2:74777549-74777568 | Msa0622360:CDS | 20.0% |
| !!! | ATTTTTTACCCATTTTTACA+AGG | - | chr4_2:74777662-74777681 | Msa0622360:intron | 20.0% |
| !!! | AATTATGGTTCTTCAATTTT+CGG | - | chr4_2:74777812-74777831 | Msa0622360:intron | 20.0% |
| !! | TACATACCATATAAATTTAG+TGG | - | chr4_2:74777956-74777975 | Msa0622360:intron | 20.0% |
| !! | ACATACCATATAAATTTAGT+GGG | - | chr4_2:74777957-74777976 | Msa0622360:intron | 20.0% |
| !! | TATATTTCCTTCAGATAAAT+TGG | - | chr4_2:74778069-74778088 | Msa0622360:intron | 20.0% |
| !! | AAGCAAATAAAATAAGATCA+AGG | + | chr4_2:74778701-74778720 | None:intergenic | 20.0% |
| !!! | GAGAATTTTCTCATAATTTT+AGG | - | chr4_2:74779311-74779330 | Msa0622360:CDS | 20.0% |
| !! | ATAAAATTGTGAGATCTATA+AGG | + | chr4_2:74779687-74779706 | None:intergenic | 20.0% |
| !! | TAAAGTTTGTAGTATAACAT+TGG | - | chr4_2:74780115-74780134 | Msa0622360:intron | 20.0% |
| !! | AAAGTTTGTAGTATAACATT+GGG | - | chr4_2:74780116-74780135 | Msa0622360:intron | 20.0% |
| !!! | CTTTAAAGTTGAAACAATAT+AGG | + | chr4_2:74780330-74780349 | None:intergenic | 20.0% |
| !! | AAATGTTTAGAAGAAAATCA+AGG | + | chr4_2:74780560-74780579 | None:intergenic | 20.0% |
| !!! | ATTTTATATTTTGCAAGACT+TGG | - | chr4_2:74780807-74780826 | Msa0622360:five_prime_UTR | 20.0% |
| ! | GACAGATATAAAATACGAAA+AGG | + | chr4_2:74777033-74777052 | None:intergenic | 25.0% |
| ! | CAATATTTCAGCATTACTTT+GGG | - | chr4_2:74777260-74777279 | Msa0622360:intron | 25.0% |
| ! | AAGAAGCTTAAACTCAAATT+TGG | - | chr4_2:74777367-74777386 | Msa0622360:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr4_2:74777575-74777594 | Msa0622360:intron | 25.0% |
| !!! | GAATTGATTTTGACATGTTT+GGG | - | chr4_2:74777576-74777595 | Msa0622360:intron | 25.0% |
| ! | AACTTTACAGAGTTATACAA+AGG | + | chr4_2:74777876-74777895 | None:intergenic | 25.0% |
| ! | TACACGATTGAAATTCAAAT+GGG | + | chr4_2:74777984-74778003 | None:intergenic | 25.0% |
| ! | ATACACGATTGAAATTCAAA+TGG | + | chr4_2:74777985-74778004 | None:intergenic | 25.0% |
| !! | GATTGAATATTTGAAGTTGA+GGG | + | chr4_2:74778016-74778035 | None:intergenic | 25.0% |
| !! | AGATTGAATATTTGAAGTTG+AGG | + | chr4_2:74778017-74778036 | None:intergenic | 25.0% |
| ! | GTTAATACCAATTTATCTGA+AGG | + | chr4_2:74778079-74778098 | None:intergenic | 25.0% |
| ! | GAATCATTCACATAAAAGAA+AGG | - | chr4_2:74778236-74778255 | Msa0622360:intron | 25.0% |
| ! | AAAATCAATGCATCAAAAAG+AGG | - | chr4_2:74778363-74778382 | Msa0622360:intron | 25.0% |
| ! | AGTGATGAATCAATATTAGA+AGG | - | chr4_2:74778498-74778517 | Msa0622360:intron | 25.0% |
| ! | GTGATGAATCAATATTAGAA+GGG | - | chr4_2:74778499-74778518 | Msa0622360:intron | 25.0% |
| ! | TGAACAATTATGATTATTGC+GGG | + | chr4_2:74778577-74778596 | None:intergenic | 25.0% |
| ! | CTGAACAATTATGATTATTG+CGG | + | chr4_2:74778578-74778597 | None:intergenic | 25.0% |
| !!! | AATCTAACTTTGAGATAATG+TGG | + | chr4_2:74778670-74778689 | None:intergenic | 25.0% |
| !! | TGTATACTCGATTTAACTTA+TGG | + | chr4_2:74778819-74778838 | None:intergenic | 25.0% |
| !! | TCAGTTTCATACAACATTTT+GGG | + | chr4_2:74779051-74779070 | None:intergenic | 25.0% |
| !! | TTCAGTTTCATACAACATTT+TGG | + | chr4_2:74779052-74779071 | None:intergenic | 25.0% |
| !!! | CACTGAATTTATTTTCTTCT+TGG | + | chr4_2:74779092-74779111 | None:intergenic | 25.0% |
| !! | TTTTTAATCACATCTTCTCT+TGG | + | chr4_2:74779159-74779178 | None:intergenic | 25.0% |
| !! | GGTTAGAATATTTTCTTAAG+TGG | - | chr4_2:74779227-74779246 | Msa0622360:CDS | 25.0% |
| ! | GAGAGATTAAGAAAAACTAT+AGG | - | chr4_2:74779338-74779357 | Msa0622360:CDS | 25.0% |
| !!! | TATCAGTGATTACTTTTACT+TGG | - | chr4_2:74779515-74779534 | Msa0622360:CDS | 25.0% |
| !!! | GTAGTGCATATTACTTTTAA+TGG | - | chr4_2:74779573-74779592 | Msa0622360:CDS | 25.0% |
| ! | TGATCTTAAGAAGAATTACT+CGG | + | chr4_2:74779655-74779674 | None:intergenic | 25.0% |
| ! | CACTTTCAATCAATATTTGA+TGG | + | chr4_2:74779734-74779753 | None:intergenic | 25.0% |
| !!! | ACTTTAAAGTTCTAACATGT+TGG | - | chr4_2:74780341-74780360 | Msa0622360:CDS | 25.0% |
| ! | ATCATCAGAAAAAGTTACTA+CGG | + | chr4_2:74780442-74780461 | None:intergenic | 25.0% |
| !!! | GTAACTTTTTCTGATGATAT+TGG | - | chr4_2:74780444-74780463 | Msa0622360:CDS | 25.0% |
| !! | TTTTAGTACTTGATATGCTT+TGG | - | chr4_2:74780578-74780597 | Msa0622360:intron | 25.0% |
| ! | AAATCCAACTACTATTTACA+AGG | + | chr4_2:74780791-74780810 | None:intergenic | 25.0% |
| !!! | ATGAGTGAGTTTTGTTGTTA+GGG | + | chr4_2:74776844-74776863 | None:intergenic | 30.0% |
| !!! | TATGAGTGAGTTTTGTTGTT+AGG | + | chr4_2:74776845-74776864 | None:intergenic | 30.0% |
| ACTTGTTTGTGATACAAAGA+GGG | + | chr4_2:74776916-74776935 | None:intergenic | 30.0% | |
| AAAATACGAAAAGGAAAACC+TGG | + | chr4_2:74777024-74777043 | None:intergenic | 30.0% | |
| ! | ACTTCTTTTTCTCTGCATAA+TGG | + | chr4_2:74777206-74777225 | None:intergenic | 30.0% |
| GCAATATTTCAGCATTACTT+TGG | - | chr4_2:74777259-74777278 | Msa0622360:intron | 30.0% | |
| !! | GATACAATTGTTGTTTCTGA+TGG | - | chr4_2:74777322-74777341 | Msa0622360:CDS | 30.0% |
| AAGCTTAAACTCAAATTTGG+AGG | - | chr4_2:74777370-74777389 | Msa0622360:CDS | 30.0% | |
| !! | TTCTAAAGCTTCTCATCTAT+CGG | - | chr4_2:74778099-74778118 | Msa0622360:intron | 30.0% |
| ! | TCTCTTTTTATCATAAGAGC+GGG | + | chr4_2:74778160-74778179 | None:intergenic | 30.0% |
| ! | CTCTCTTTTTATCATAAGAG+CGG | + | chr4_2:74778161-74778180 | None:intergenic | 30.0% |
| TTGATTCATCACTTGATGTA+GGG | + | chr4_2:74778491-74778510 | None:intergenic | 30.0% | |
| ! | ATTGATTCATCACTTGATGT+AGG | + | chr4_2:74778492-74778511 | None:intergenic | 30.0% |
| ! | ACTCGATTTAACTTATGGTA+GGG | + | chr4_2:74778814-74778833 | None:intergenic | 30.0% |
| ! | TACTCGATTTAACTTATGGT+AGG | + | chr4_2:74778815-74778834 | None:intergenic | 30.0% |
| ! | ATTGGTGTAGCTTTTATAGT+AGG | - | chr4_2:74779198-74779217 | Msa0622360:CDS | 30.0% |
| ! | TTGGTGTAGCTTTTATAGTA+GGG | - | chr4_2:74779199-74779218 | Msa0622360:CDS | 30.0% |
| TACCTCTAAATCTCTTCTAA+TGG | + | chr4_2:74779370-74779389 | None:intergenic | 30.0% | |
| AGAAGAGATTTAGAGGTAAA+TGG | - | chr4_2:74779372-74779391 | Msa0622360:CDS | 30.0% | |
| TTGTGTACAACTAATGTAAG+TGG | - | chr4_2:74779707-74779726 | Msa0622360:intron | 30.0% | |
| TGTGTACAACTAATGTAAGT+GGG | - | chr4_2:74779708-74779727 | Msa0622360:intron | 30.0% | |
| ! | TCTAAAACTAAGATGATCAG+AGG | + | chr4_2:74780093-74780112 | None:intergenic | 30.0% |
| TTGACCAAGTATCTTCTTAA+TGG | + | chr4_2:74780217-74780236 | None:intergenic | 30.0% | |
| AGGAAAAGATGAATAAGCAA+AGG | - | chr4_2:74780259-74780278 | Msa0622360:intron | 30.0% | |
| GGAAAAGATGAATAAGCAAA+GGG | - | chr4_2:74780260-74780279 | Msa0622360:intron | 30.0% | |
| AAACAATATAGGAAGAAGGT+TGG | + | chr4_2:74780319-74780338 | None:intergenic | 30.0% | |
| GTTGAAACAATATAGGAAGA+AGG | + | chr4_2:74780323-74780342 | None:intergenic | 30.0% | |
| TAGTCCTTGTAAATAGTAGT+TGG | - | chr4_2:74780784-74780803 | Msa0622360:five_prime_UTR | 30.0% | |
| ! | TATATTTTGCAAGACTTGGA+AGG | - | chr4_2:74780811-74780830 | Msa0622360:five_prime_UTR | 30.0% |
| ! | GACTTGTTTGTGATACAAAG+AGG | + | chr4_2:74776917-74776936 | None:intergenic | 35.0% |
| !!! | CCGGTTAAGTTTTGATTTTC+CGG | + | chr4_2:74776958-74776977 | None:intergenic | 35.0% |
| CCGGAAAATCAAAACTTAAC+CGG | - | chr4_2:74776955-74776974 | Msa0622360:three_prime_UTR | 35.0% | |
| ATTGCATCACAATTAACCCT+AGG | + | chr4_2:74777244-74777263 | None:intergenic | 35.0% | |
| ATTATTACCTTAGCATTGCG+AGG | + | chr4_2:74777433-74777452 | None:intergenic | 35.0% | |
| GGATACGTCCTTGTAAAAAT+GGG | + | chr4_2:74777673-74777692 | None:intergenic | 35.0% | |
| AATGCAAAGTGGTCTATGTT+CGG | + | chr4_2:74777694-74777713 | None:intergenic | 35.0% | |
| ! | AAAGTGAGTTGAATGCAAAG+TGG | + | chr4_2:74777705-74777724 | None:intergenic | 35.0% |
| AATTCATCCAAGTGCATGTT+TGG | + | chr4_2:74777773-74777792 | None:intergenic | 35.0% | |
| GTATTTGCAAGAGCTTCTAT+TGG | - | chr4_2:74777847-74777866 | Msa0622360:intron | 35.0% | |
| TGGTATGTACATGATTTCGT+GGG | + | chr4_2:74777945-74777964 | None:intergenic | 35.0% | |
| ATGGTATGTACATGATTTCG+TGG | + | chr4_2:74777946-74777965 | None:intergenic | 35.0% | |
| TGGGTCCCACTAAATTTATA+TGG | + | chr4_2:74777965-74777984 | None:intergenic | 35.0% | |
| CGCTCTTATGATAAAAAGAG+AGG | - | chr4_2:74778159-74778178 | Msa0622360:intron | 35.0% | |
| TATGATAAAAAGAGAGGCCA+TGG | - | chr4_2:74778165-74778184 | Msa0622360:intron | 35.0% | |
| ATGATAAAAAGAGAGGCCAT+GGG | - | chr4_2:74778166-74778185 | Msa0622360:intron | 35.0% | |
| ACAATTATGATTATTGCGGG+TGG | + | chr4_2:74778574-74778593 | None:intergenic | 35.0% | |
| TCTTTCAAAGATGTGCTATC+TGG | - | chr4_2:74778603-74778622 | Msa0622360:intron | 35.0% | |
| CTTTCAAAGATGTGCTATCT+GGG | - | chr4_2:74778604-74778623 | Msa0622360:intron | 35.0% | |
| ATGTCAATAATGCTTGCAAC+TGG | + | chr4_2:74778630-74778649 | None:intergenic | 35.0% | |
| ! | CTCGATTTAACTTATGGTAG+GGG | + | chr4_2:74778813-74778832 | None:intergenic | 35.0% |
| ACAAAGTGCAAGTTTAGCAA+AGG | - | chr4_2:74778836-74778855 | Msa0622360:intron | 35.0% | |
| GGAGATATTAACCTTTGAGT+GGG | - | chr4_2:74778929-74778948 | Msa0622360:intron | 35.0% | |
| ATATTAACCTTTGAGTGGGA+TGG | - | chr4_2:74778933-74778952 | Msa0622360:intron | 35.0% | |
| ! | AGCTTTTATAGTAGGGAACA+TGG | - | chr4_2:74779206-74779225 | Msa0622360:CDS | 35.0% |
| AGCCATTAGAAGAGATTTAG+AGG | - | chr4_2:74779365-74779384 | Msa0622360:CDS | 35.0% | |
| !! | ATATAGGTAGGTTGGTTACA+TGG | + | chr4_2:74779456-74779475 | None:intergenic | 35.0% |
| ATGTAACCAACCTACCTATA+TGG | - | chr4_2:74779455-74779474 | Msa0622360:CDS | 35.0% | |
| ACAACAAGCCATTAACCTAT+AGG | + | chr4_2:74779487-74779506 | None:intergenic | 35.0% | |
| TCATACTGAGTTACGAAACA+AGG | + | chr4_2:74779847-74779866 | None:intergenic | 35.0% | |
| TTGTTTCGTAACTCAGTATG+AGG | - | chr4_2:74779846-74779865 | Msa0622360:intron | 35.0% | |
| GACATTGTATGCATATCTCT+AGG | - | chr4_2:74779917-74779936 | Msa0622360:intron | 35.0% | |
| TAAAAAGAGCAAGTTGTCAG+AGG | - | chr4_2:74779979-74779998 | Msa0622360:intron | 35.0% | |
| ACGAAAAATTCAAGCTGAGA+AGG | - | chr4_2:74780036-74780055 | Msa0622360:intron | 35.0% | |
| CTCTCACATTGTGTTTATGT+AGG | - | chr4_2:74780185-74780204 | Msa0622360:intron | 35.0% | |
| GTGTTTGATGCTAGATTGAA+GGG | + | chr4_2:74780390-74780409 | None:intergenic | 35.0% | |
| AGTGTTTGATGCTAGATTGA+AGG | + | chr4_2:74780391-74780410 | None:intergenic | 35.0% | |
| AAAGTTACTACGGTTCCATT+GGG | + | chr4_2:74780432-74780451 | None:intergenic | 35.0% | |
| AAAAGTTACTACGGTTCCAT+TGG | + | chr4_2:74780433-74780452 | None:intergenic | 35.0% | |
| GACATTGTTTGGAAGATACT+TGG | + | chr4_2:74780474-74780493 | None:intergenic | 35.0% | |
| TCTTCCAAACAATGTCTAAC+AGG | - | chr4_2:74780478-74780497 | Msa0622360:CDS | 35.0% | |
| TGTACCTGTTAGACATTGTT+TGG | + | chr4_2:74780485-74780504 | None:intergenic | 35.0% | |
| TTGTAAGCATTAGTGCAGTT+TGG | + | chr4_2:74780676-74780695 | None:intergenic | 35.0% | |
| GCACTAATGCTTACAAGTAT+CGG | - | chr4_2:74780680-74780699 | Msa0622360:intron | 35.0% | |
| CACTAATGCTTACAAGTATC+GGG | - | chr4_2:74780681-74780700 | Msa0622360:intron | 35.0% | |
| ! | AATTTTTCCACATATCCTCC+TGG | + | chr4_2:74780849-74780868 | None:intergenic | 35.0% |
| TTGAGACAAAGAGGTCTATT+TGG | + | chr4_2:74780874-74780893 | None:intergenic | 35.0% | |
| GACAAAGAATTGAGACAAAG+AGG | + | chr4_2:74780883-74780902 | None:intergenic | 35.0% | |
| ! | CAATTAACCCTAGGTTTTCG+TGG | + | chr4_2:74777235-74777254 | None:intergenic | 40.0% |
| CGGATACGTCCTTGTAAAAA+TGG | + | chr4_2:74777674-74777693 | None:intergenic | 40.0% | |
| ! | TATCGGTTATCAATGCATGC+AGG | - | chr4_2:74778116-74778135 | Msa0622360:intron | 40.0% |
| TGATAAAAAGAGAGGCCATG+GGG | - | chr4_2:74778167-74778186 | Msa0622360:intron | 40.0% | |
| AATAACTCGCTTGCTCTTAC+GGG | + | chr4_2:74778277-74778296 | None:intergenic | 40.0% | |
| CAATAACTCGCTTGCTCTTA+CGG | + | chr4_2:74778278-74778297 | None:intergenic | 40.0% | |
| AGTTATTGAGAGATGTGCCA+TGG | - | chr4_2:74778290-74778309 | Msa0622360:intron | 40.0% | |
| AGTCGCCATAAGGATAATCA+AGG | - | chr4_2:74778390-74778409 | Msa0622360:intron | 40.0% | |
| TGCCTCCTTGATTATCCTTA+TGG | + | chr4_2:74778398-74778417 | None:intergenic | 40.0% | |
| GGTGTTTGTAAAGATGCATC+AGG | - | chr4_2:74778429-74778448 | Msa0622360:intron | 40.0% | |
| TGCATCAGGAAAGAACTATG+AGG | - | chr4_2:74778443-74778462 | Msa0622360:intron | 40.0% | |
| CAGGAAAGAACTATGAGGAT+CGG | - | chr4_2:74778448-74778467 | Msa0622360:intron | 40.0% | |
| AGGAAAGAACTATGAGGATC+GGG | - | chr4_2:74778449-74778468 | Msa0622360:intron | 40.0% | |
| AAACCAACAGATTCCCTCTT+TGG | + | chr4_2:74778531-74778550 | None:intergenic | 40.0% | |
| GCAAGCATTATTGACATCTC+AGG | - | chr4_2:74778633-74778652 | Msa0622360:intron | 40.0% | |
| AGCATTATTGACATCTCAGG+TGG | - | chr4_2:74778636-74778655 | Msa0622360:intron | 40.0% | |
| TATTGACATCTCAGGTGGTT+TGG | - | chr4_2:74778641-74778660 | Msa0622360:intron | 40.0% | |
| ! | GATTTAACTTATGGTAGGGG+CGG | + | chr4_2:74778810-74778829 | None:intergenic | 40.0% |
| AGTCACTTCGTATGGAATCA+AGG | + | chr4_2:74778898-74778917 | None:intergenic | 40.0% | |
| TGATTCCATACGAAGTGACT+AGG | - | chr4_2:74778898-74778917 | Msa0622360:intron | 40.0% | |
| TATCTCCTAGTCACTTCGTA+TGG | + | chr4_2:74778906-74778925 | None:intergenic | 40.0% | |
| GGGAGATATTAACCTTTGAG+TGG | - | chr4_2:74778928-74778947 | Msa0622360:intron | 40.0% | |
| ATTTCATCCATCCCACTCAA+AGG | + | chr4_2:74778943-74778962 | None:intergenic | 40.0% | |
| TTGAGTGGGATGGATGAAAT+AGG | - | chr4_2:74778943-74778962 | Msa0622360:intron | 40.0% | |
| CAGTGTCACAAAGATCTCAA+TGG | - | chr4_2:74779107-74779126 | Msa0622360:intron | 40.0% | |
| CAAAGATCTCAATGGTGCAA+TGG | - | chr4_2:74779115-74779134 | Msa0622360:intron | 40.0% | |
| ! | AGTGGATTTAGCAAGTTACG+AGG | - | chr4_2:74779245-74779264 | Msa0622360:CDS | 40.0% |
| !! | CAGCGTTAAGCTGTTTCTAT+AGG | + | chr4_2:74779272-74779291 | None:intergenic | 40.0% |
| CTGATGAGGAAAATACTAGC+TGG | - | chr4_2:74779289-74779308 | Msa0622360:CDS | 40.0% | |
| AGAGGTAAATGGTCTCATGT+TGG | - | chr4_2:74779383-74779402 | Msa0622360:CDS | 40.0% | |
| TGAGATCCATATAGGTAGGT+TGG | + | chr4_2:74779464-74779483 | None:intergenic | 40.0% | |
| TAGGTGAGATCCATATAGGT+AGG | + | chr4_2:74779468-74779487 | None:intergenic | 40.0% | |
| CCTATAGGTGAGATCCATAT+AGG | + | chr4_2:74779472-74779491 | None:intergenic | 40.0% | |
| CCTATATGGATCTCACCTAT+AGG | - | chr4_2:74779469-74779488 | Msa0622360:CDS | 40.0% | |
| GGATCTCACCTATAGGTTAA+TGG | - | chr4_2:74779476-74779495 | Msa0622360:CDS | 40.0% | |
| ACTGAGTTACGAAACAAGGT+GGG | + | chr4_2:74779843-74779862 | None:intergenic | 40.0% | |
| TACTGAGTTACGAAACAAGG+TGG | + | chr4_2:74779844-74779863 | None:intergenic | 40.0% | |
| ACAGCTAATCAAGAAAGCTG+AGG | - | chr4_2:74780003-74780022 | Msa0622360:intron | 40.0% | |
| GCAGCCATTAAGAAGATACT+TGG | - | chr4_2:74780210-74780229 | Msa0622360:intron | 40.0% | |
| CGTAAACTGTATCAAGACCT+TGG | + | chr4_2:74780295-74780314 | None:intergenic | 40.0% | |
| ! | TTCTAACATGTTGGTTGTGC+AGG | - | chr4_2:74780350-74780369 | Msa0622360:CDS | 40.0% |
| TAGCATCAAACACTGTTCGA+TGG | - | chr4_2:74780397-74780416 | Msa0622360:CDS | 40.0% | |
| !! | AAACACTGTTCGATGGACTA+TGG | - | chr4_2:74780404-74780423 | Msa0622360:CDS | 40.0% |
| !! | AACACTGTTCGATGGACTAT+GGG | - | chr4_2:74780405-74780424 | Msa0622360:CDS | 40.0% |
| TAACAACCAAGACTGCAAAG+GGG | + | chr4_2:74780724-74780743 | None:intergenic | 40.0% | |
| GTAACAACCAAGACTGCAAA+GGG | + | chr4_2:74780725-74780744 | None:intergenic | 40.0% | |
| TGTAACAACCAAGACTGCAA+AGG | + | chr4_2:74780726-74780745 | None:intergenic | 40.0% | |
| AAGGACTAACATGCAATCAC+AGG | + | chr4_2:74780772-74780791 | None:intergenic | 40.0% | |
| GACTTGGAAGGTTTGTGATT+TGG | - | chr4_2:74780823-74780842 | Msa0622360:five_prime_UTR | 40.0% | |
| ! | TTCCTTGCTACGGTGTTTTC+CGG | + | chr4_2:74776977-74776996 | None:intergenic | 45.0% |
| AAAGGAAAACCTGGACATCG+TGG | + | chr4_2:74777015-74777034 | None:intergenic | 45.0% | |
| TGATGTGCCACGAAAACCTA+GGG | - | chr4_2:74777225-74777244 | Msa0622360:intron | 45.0% | |
| TACCTTAGCATTGCGAGGAT+CGG | + | chr4_2:74777428-74777447 | None:intergenic | 45.0% | |
| ! | TGTATGTTTGGTTCCACGTC+TGG | - | chr4_2:74777518-74777537 | Msa0622360:CDS | 45.0% |
| ! | CAAGTGCATGTTTGGTTCAG+TGG | + | chr4_2:74777765-74777784 | None:intergenic | 45.0% |
| CACTGAACCAAACATGCACT+TGG | - | chr4_2:74777763-74777782 | Msa0622360:CDS | 45.0% | |
| GCTTAACCAATTTGTCCCCA+TGG | + | chr4_2:74778185-74778204 | None:intergenic | 45.0% | |
| AAGAGGAGTTAGTCGCCATA+AGG | - | chr4_2:74778380-74778399 | Msa0622360:intron | 45.0% | |
| CGCCATAAGGATAATCAAGG+AGG | - | chr4_2:74778393-74778412 | Msa0622360:intron | 45.0% | |
| TAGAAGGGAAGAAGCCAAAG+AGG | - | chr4_2:74778514-74778533 | Msa0622360:intron | 45.0% | |
| AGAAGGGAAGAAGCCAAAGA+GGG | - | chr4_2:74778515-74778534 | Msa0622360:intron | 45.0% | |
| AAGCCAAAGAGGGAATCTGT+TGG | - | chr4_2:74778525-74778544 | Msa0622360:intron | 45.0% | |
| ACGAAGTGACTAGGAGATAG+AGG | - | chr4_2:74778907-74778926 | Msa0622360:intron | 45.0% | |
| CGAAGTGACTAGGAGATAGA+GGG | - | chr4_2:74778908-74778927 | Msa0622360:intron | 45.0% | |
| !! | TCAATGGTGCAATGGACTAG+TGG | - | chr4_2:74779123-74779142 | Msa0622360:CDS | 45.0% |
| GAAACAGCTTAACGCTGATG+AGG | - | chr4_2:74779275-74779294 | Msa0622360:CDS | 45.0% | |
| GGTCTCATGTTGGACCTAAT+AGG | - | chr4_2:74779393-74779412 | Msa0622360:CDS | 45.0% | |
| CTAATAGGCTCGTGCATGTT+GGG | - | chr4_2:74779408-74779427 | Msa0622360:CDS | 45.0% | |
| CTGAGTTACGAAACAAGGTG+GGG | + | chr4_2:74779842-74779861 | None:intergenic | 45.0% | |
| TACTTGGTCAAGATCCTGCT+AGG | - | chr4_2:74780226-74780245 | Msa0622360:intron | 45.0% | |
| TCCTGCTAGGAAGAAGAAAG+AGG | - | chr4_2:74780239-74780258 | Msa0622360:intron | 45.0% | |
| TCCTCTTTCTTCTTCCTAGC+AGG | + | chr4_2:74780243-74780262 | None:intergenic | 45.0% | |
| GCAAAGGGATGAAATAGCCA+AGG | - | chr4_2:74780275-74780294 | Msa0622360:intron | 45.0% | |
| ! | ACCTGCACACTTTTCTCTTG+GGG | + | chr4_2:74780653-74780672 | None:intergenic | 45.0% |
| ! | GACCTGCACACTTTTCTCTT+GGG | + | chr4_2:74780654-74780673 | None:intergenic | 45.0% |
| !!! | TACAAATTTTAAATTAATAA+TGG | - | chr4_2:74779600-74779619 | Msa0622360:CDS | 5.0% |
| CAAACAAGTCGCAGTCCTAC+TGG | - | chr4_2:74776927-74776946 | Msa0622360:three_prime_UTR | 50.0% | |
| AACCGGAAAACACCGTAGCA+AGG | - | chr4_2:74776972-74776991 | Msa0622360:exon | 50.0% | |
| !! | TGTGGTGGGTTTCCTTGCTA+CGG | + | chr4_2:74776987-74777006 | None:intergenic | 50.0% |
| ACATCGTGGCTGTTTGTGGT+GGG | + | chr4_2:74777001-74777020 | None:intergenic | 50.0% | |
| GTGATGTGCCACGAAAACCT+AGG | - | chr4_2:74777224-74777243 | Msa0622360:intron | 50.0% | |
| TTCCGATCCTCGCAATGCTA+AGG | - | chr4_2:74777423-74777442 | Msa0622360:intron | 50.0% | |
| ! | ATGTTTGGTTCCACGTCTGG+TGG | - | chr4_2:74777521-74777540 | Msa0622360:CDS | 50.0% |
| TCTATTGTCTCCACCAGACG+TGG | + | chr4_2:74777534-74777553 | None:intergenic | 50.0% | |
| TGAGAGATGTGCCATGGATG+TGG | - | chr4_2:74778296-74778315 | Msa0622360:intron | 50.0% | |
| GAGAGATGTGCCATGGATGT+GGG | - | chr4_2:74778297-74778316 | Msa0622360:intron | 50.0% | |
| AGAGATGTGCCATGGATGTG+GGG | - | chr4_2:74778298-74778317 | Msa0622360:intron | 50.0% | |
| TTGCGGGTGGAATGCTTTCT+TGG | + | chr4_2:74778561-74778580 | None:intergenic | 50.0% | |
| CCAACATGCACGAGCCTATT+AGG | + | chr4_2:74779410-74779429 | None:intergenic | 50.0% | |
| CCTAATAGGCTCGTGCATGT+TGG | - | chr4_2:74779407-74779426 | Msa0622360:CDS | 50.0% | |
| AGTTACGAAACAAGGTGGGG+AGG | + | chr4_2:74779839-74779858 | None:intergenic | 50.0% | |
| TTCAAGCTGAGAAGGCAGCT+AGG | - | chr4_2:74780044-74780063 | Msa0622360:intron | 50.0% | |
| TCAAGCTGAGAAGGCAGCTA+GGG | - | chr4_2:74780045-74780064 | Msa0622360:intron | 50.0% | |
| GAGGAGTCACGTTCAAACCT+CGG | + | chr4_2:74780074-74780093 | None:intergenic | 50.0% | |
| ! | CCTGCACACTTTTCTCTTGG+GGG | + | chr4_2:74780652-74780671 | None:intergenic | 50.0% |
| ! | GGACCTGCACACTTTTCTCT+TGG | + | chr4_2:74780655-74780674 | None:intergenic | 50.0% |
| ! | GCAAAGGGGAAGCTTTGACT+TGG | + | chr4_2:74780710-74780729 | None:intergenic | 50.0% |
| AAGCTTCCCCTTTGCAGTCT+TGG | - | chr4_2:74780715-74780734 | Msa0622360:intron | 50.0% | |
| ! | GGAAGGTTTGTGATTTGGCC+AGG | - | chr4_2:74780828-74780847 | Msa0622360:five_prime_UTR | 50.0% |
| ! | AGGTTTGTGATTTGGCCAGG+AGG | - | chr4_2:74780831-74780850 | Msa0622360:five_prime_UTR | 50.0% |
| GATTTGGCCAGGAGGATATG+TGG | - | chr4_2:74780839-74780858 | Msa0622360:five_prime_UTR | 50.0% | |
| ! | GATTTTCCGGCGAGTCCAGT+AGG | + | chr4_2:74776945-74776964 | None:intergenic | 55.0% |
| GACATCGTGGCTGTTTGTGG+TGG | + | chr4_2:74777002-74777021 | None:intergenic | 55.0% | |
| CTGGACATCGTGGCTGTTTG+TGG | + | chr4_2:74777005-74777024 | None:intergenic | 55.0% | |
| CACAAACAGCCACGATGTCC+AGG | - | chr4_2:74777003-74777022 | Msa0622360:CDS | 55.0% | |
| GCATTGCGAGGATCGGAAGA+AGG | + | chr4_2:74777421-74777440 | None:intergenic | 55.0% | |
| GAGAGGCCATGGGGACAAAT+TGG | - | chr4_2:74778176-74778195 | Msa0622360:intron | 55.0% | |
| ATCGCTACACCCCACATCCA+TGG | + | chr4_2:74778310-74778329 | None:intergenic | 55.0% | |
| ! | CAAGGAGGCACAACAATGCG+TGG | - | chr4_2:74778408-74778427 | Msa0622360:intron | 55.0% |
| ! | ATGTAATGCGAAGCACCCCC+CGG | - | chr4_2:74779811-74779830 | Msa0622360:intron | 55.0% |
| !! | CGATGGACTATGGGTCCCAA+TGG | - | chr4_2:74780414-74780433 | Msa0622360:CDS | 55.0% |
| ! | GCACACTTTTCTCTTGGGGG+AGG | + | chr4_2:74780649-74780668 | None:intergenic | 55.0% |
| ! | CCCCCAAGAGAAAAGTGTGC+AGG | - | chr4_2:74780649-74780668 | Msa0622360:intron | 55.0% |
| GCGAGGATCGGAAGAAGGCT+TGG | + | chr4_2:74777416-74777435 | None:intergenic | 60.0% | |
| ! | TGTAATGCGAAGCACCCCCC+GGG | - | chr4_2:74779812-74779831 | Msa0622360:intron | 60.0% |
| AAACAAGGTGGGGAGGACCC+GGG | + | chr4_2:74779832-74779851 | None:intergenic | 60.0% | |
| GAAACAAGGTGGGGAGGACC+CGG | + | chr4_2:74779833-74779852 | None:intergenic | 60.0% | |
| AGCTGAGAAGGCAGCTAGGG+AGG | - | chr4_2:74780048-74780067 | Msa0622360:intron | 60.0% | |
| CGCAGTCCTACTGGACTCGC+CGG | - | chr4_2:74776936-74776955 | Msa0622360:three_prime_UTR | 65.0% | |
| AACAAGGTGGGGAGGACCCG+GGG | + | chr4_2:74779831-74779850 | None:intergenic | 65.0% | |
| ACAAGGTGGGGAGGACCCGG+GGG | + | chr4_2:74779830-74779849 | None:intergenic | 70.0% | |
| GAAGGCAGCTAGGGAGGCCG+AGG | - | chr4_2:74780054-74780073 | Msa0622360:intron | 70.0% | |
| CAAGGTGGGGAGGACCCGGG+GGG | + | chr4_2:74779829-74779848 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 74776820 | 74780957 | 74776820 | ID=Msa0622360;Name=Msa0622360 |
| chr4_2 | mRNA | 74776820 | 74780957 | 74776820 | ID=Msa0622360-mRNA-1;Parent=Msa0622360;Name=Msa0622360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=197|1|1|1|1|0.85|7|171|413 |
| chr4_2 | exon | 74776820 | 74777135 | 74776820 | ID=Msa0622360-mRNA-1:exon:22636;Parent=Msa0622360-mRNA-1 |
| chr4_2 | exon | 74777278 | 74777405 | 74777278 | ID=Msa0622360-mRNA-1:exon:22635;Parent=Msa0622360-mRNA-1 |
| chr4_2 | exon | 74777481 | 74777570 | 74777481 | ID=Msa0622360-mRNA-1:exon:22634;Parent=Msa0622360-mRNA-1 |
| chr4_2 | exon | 74777702 | 74777799 | 74777702 | ID=Msa0622360-mRNA-1:exon:22633;Parent=Msa0622360-mRNA-1 |
| chr4_2 | exon | 74779123 | 74779639 | 74779123 | ID=Msa0622360-mRNA-1:exon:22632;Parent=Msa0622360-mRNA-1 |
| chr4_2 | exon | 74780333 | 74780588 | 74780333 | ID=Msa0622360-mRNA-1:exon:22631;Parent=Msa0622360-mRNA-1 |
| chr4_2 | exon | 74780753 | 74780957 | 74780753 | ID=Msa0622360-mRNA-1:exon:22630;Parent=Msa0622360-mRNA-1 |
| chr4_2 | five_prime_UTR | 74780761 | 74780957 | 74780761 | ID=Msa0622360-mRNA-1:five_prime_utr;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74780753 | 74780760 | 74780753 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74780333 | 74780588 | 74780333 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74779123 | 74779639 | 74779123 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74777702 | 74777799 | 74777702 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74777481 | 74777570 | 74777481 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74777278 | 74777405 | 74777278 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | CDS | 74776991 | 74777135 | 74776991 | ID=Msa0622360-mRNA-1:cds;Parent=Msa0622360-mRNA-1 |
| chr4_2 | three_prime_UTR | 74776820 | 74776990 | 74776820 | ID=Msa0622360-mRNA-1:three_prime_utr;Parent=Msa0622360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
