AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0200950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200950 MtrunA17_Chr2g0321241 88.769 463 26 3 1 463 1 437 0.0 780
Msa0200950 MtrunA17_Chr4g0026631 80.994 463 57 4 1 463 1 432 0.0 735
Msa0200950 MtrunA17_Chr4g0052271 41.018 334 148 8 71 382 37 343 2.64e-67 223
Msa0200950 MtrunA17_Chr4g0004121 35.000 400 179 9 76 461 195 527 3.04e-67 227
Msa0200950 MtrunA17_Chr2g0297851 71.812 149 32 2 1 149 1 139 7.37e-64 210
Msa0200950 MtrunA17_Chr2g0297851 77.165 127 24 1 5 131 125 246 6.85e-55 186
Msa0200950 MtrunA17_Chr7g0246111 36.111 360 182 8 106 461 189 504 1.97e-58 203
Msa0200950 MtrunA17_Chr6g0459561 33.604 369 179 6 106 465 351 662 1.88e-55 198
Msa0200950 MtrunA17_Chr6g0459541 32.653 392 169 10 106 461 11 343 1.06e-53 186
Msa0200950 MtrunA17_Chr6g0459551 29.187 418 190 12 106 480 71 425 6.63e-43 159
Msa0200950 MtrunA17_Chr4g0038101 37.209 258 124 7 132 382 721 947 7.45e-43 164
Msa0200950 MtrunA17_Chr1g0202381 31.111 360 188 10 42 382 375 693 3.57e-42 162
Msa0200950 MtrunA17_Chr8g0387641 35.409 257 131 5 131 382 520 746 1.87e-41 160
Msa0200950 MtrunA17_Chr6g0462581 37.209 258 122 7 132 382 500 724 3.44e-41 159
Msa0200950 MtrunA17_Chr5g0397121 32.822 326 176 8 66 382 447 738 1.08e-40 157
Msa0200950 MtrunA17_Chr1g0195731 35.887 248 122 6 132 372 934 1151 2.51e-39 154
Msa0200950 MtrunA17_Chr1g0202371 35.433 254 132 7 132 382 397 621 8.40e-39 151
Msa0200950 MtrunA17_Chr1g0204031 33.871 248 126 6 132 372 557 773 2.72e-38 150
Msa0200950 MtrunA17_Chr6g0459531 28.070 342 164 7 121 461 56 316 3.07e-38 143
Msa0200950 MtrunA17_Chr3g0116131 34.677 248 125 6 132 372 902 1119 2.00e-37 148
Msa0200950 MtrunA17_Chr1g0195741 34.940 249 123 7 132 372 938 1155 3.12e-37 147
Msa0200950 MtrunA17_Chr3g0127431 33.977 259 138 7 131 385 83 312 3.18e-34 134
Msa0200950 MtrunA17_Chr1g0180791 35.857 251 125 10 128 371 474 695 6.18e-33 134
Msa0200950 MtrunA17_Chr1g0180791 31.538 260 144 9 132 387 205 434 5.65e-28 119
Msa0200950 MtrunA17_Chr7g0264521 35.458 251 126 10 128 371 475 696 8.10e-33 134
Msa0200950 MtrunA17_Chr7g0264521 31.365 271 148 10 125 387 195 435 1.21e-27 118
Msa0200950 MtrunA17_Chr2g0327121 35.317 252 125 10 128 371 476 697 2.63e-32 132
Msa0200950 MtrunA17_Chr2g0327121 30.385 260 147 9 132 387 207 436 1.67e-26 114
Msa0200950 MtrunA17_Chr3g0127401 33.594 256 137 7 131 382 80 306 4.51e-32 127
Msa0200950 MtrunA17_Chr8g0362771 33.462 260 136 10 131 386 236 462 7.66e-32 130
Msa0200950 MtrunA17_Chr7g0217421 35.521 259 125 12 121 369 26 252 1.28e-30 124
Msa0200950 MtrunA17_Chr3g0145011 32.222 270 143 12 125 385 131 369 7.66e-30 121
Msa0200950 MtrunA17_Chr3g0141901 31.852 270 144 12 125 385 128 366 1.36e-29 120
Msa0200950 MtrunA17_Chr7g0255641 31.944 288 152 10 110 386 634 888 2.85e-29 123
Msa0200950 MtrunA17_Chr7g0255641 33.488 215 104 7 156 368 425 602 1.11e-19 93.6
Msa0200950 MtrunA17_Chr4g0052411 33.119 311 166 12 120 422 215 491 4.40e-29 122
Msa0200950 MtrunA17_Chr7g0255651 31.461 267 150 8 121 382 271 509 4.89e-29 121
Msa0200950 MtrunA17_Chr7g0255691 34.948 289 151 11 110 390 262 521 5.30e-29 121
Msa0200950 MtrunA17_Chr8g0345461 32.847 274 138 12 112 373 145 384 7.57e-29 119
Msa0200950 MtrunA17_Chr2g0297281 36.546 249 120 11 129 369 281 499 2.15e-28 120
Msa0200950 MtrunA17_Chr7g0255721 31.597 288 153 10 110 386 661 915 4.35e-28 119
Msa0200950 MtrunA17_Chr7g0255721 31.169 231 115 7 169 386 422 621 1.50e-20 96.3
Msa0200950 MtrunA17_Chr1g0192151 32.157 255 137 10 126 373 161 386 7.61e-28 116
Msa0200950 MtrunA17_Chr4g0014731 32.157 255 137 10 126 373 162 387 8.47e-28 115
Msa0200950 MtrunA17_Chr1g0200081 32.601 273 139 12 112 373 155 393 2.08e-27 115
Msa0200950 MtrunA17_Chr1g0158881 34.749 259 127 13 121 372 318 541 2.92e-26 114
Msa0200950 MtrunA17_Chr3g0143721 33.463 257 135 10 132 382 249 475 1.54e-25 111
Msa0200950 MtrunA17_Chr1g0182711 29.252 294 158 12 126 398 182 446 1.96e-25 109
Msa0200950 MtrunA17_Chr7g0255901 30.888 259 135 7 130 377 637 862 3.37e-25 110
Msa0200950 MtrunA17_Chr3g0135761 32.114 246 132 10 131 372 221 435 3.37e-25 110
Msa0200950 MtrunA17_Chr7g0262801 29.252 294 158 12 126 398 181 445 3.65e-25 108
Msa0200950 MtrunA17_Chr7g0248361 35.714 252 118 12 132 371 192 411 4.68e-25 109
Msa0200950 MtrunA17_Chr5g0432631 31.707 246 133 10 131 372 228 442 9.42e-25 109
Msa0200950 MtrunA17_Chr7g0260601 34.363 259 130 11 129 377 237 465 1.80e-24 108
Msa0200950 MtrunA17_Chr3g0135721 31.452 248 131 11 131 372 223 437 4.99e-24 106
Msa0200950 MtrunA17_Chr6g0456351 31.541 279 143 12 122 387 304 547 5.93e-24 106
Msa0200950 MtrunA17_Chr6g0476861 34.800 250 123 11 132 371 197 416 7.80e-24 105
Msa0200950 MtrunA17_Chr3g0108321 33.333 219 114 7 128 341 155 346 8.61e-24 103
Msa0200950 MtrunA17_Chr4g0031821 34.363 259 130 11 129 377 317 545 1.44e-23 105
Msa0200950 MtrunA17_Chr2g0289231 30.597 268 137 10 120 373 285 517 2.32e-23 104
Msa0200950 MtrunA17_Chr3g0094871 35.156 256 127 11 131 377 10 235 2.57e-23 102
Msa0200950 MtrunA17_Chr5g0429571 32.061 262 141 8 131 384 312 544 3.35e-22 101
Msa0200950 MtrunA17_Chr2g0277831 30.315 254 141 11 130 377 531 754 5.46e-22 100
Msa0200950 MtrunA17_Chr2g0277831 30.841 214 105 8 166 369 277 457 2.54e-17 85.9
Msa0200950 MtrunA17_Chr2g0331161 33.465 254 123 10 131 373 414 632 5.59e-22 100
Msa0200950 MtrunA17_Chr2g0316851 29.839 248 145 8 134 376 596 819 5.91e-22 100
Msa0200950 MtrunA17_Chr4g0033451 30.769 247 144 7 131 373 379 602 1.12e-21 99.8
Msa0200950 MtrunA17_Chr2g0327231 32.828 198 102 7 122 315 335 505 1.61e-21 98.2
Msa0200950 MtrunA17_Chr3g0135781 33.862 189 93 8 131 317 54 212 1.45e-19 87.4
Msa0200950 MtrunA17_Chr3g0086401 26.899 316 177 11 166 465 128 405 3.73e-19 91.3
Msa0200950 MtrunA17_Chr8g0388371 27.148 291 167 11 132 407 404 664 1.35e-18 90.1
Msa0200950 MtrunA17_Chr3g0086411 34.921 126 72 4 256 372 18 142 1.18e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200950 AT2G27600.1 80.130 463 63 4 1 463 1 434 0.0 730
Msa0200950 AT1G80350.1 35.052 388 185 9 86 461 189 521 7.27e-68 229
Msa0200950 AT2G45500.4 36.031 383 182 8 80 461 32 352 2.25e-64 214
Msa0200950 AT2G45500.3 36.031 383 182 8 80 461 32 352 2.25e-64 214
Msa0200950 AT2G34560.1 36.011 361 173 10 110 466 78 384 6.63e-63 212
Msa0200950 AT2G45500.2 36.031 383 182 8 80 461 165 485 9.57e-63 214
Msa0200950 AT2G45500.5 36.031 383 182 8 80 461 175 495 1.12e-62 214
Msa0200950 AT2G34560.2 36.011 361 173 10 110 466 87 393 1.27e-62 211
Msa0200950 AT2G45500.1 36.031 383 182 8 80 461 169 489 1.45e-62 214
Msa0200950 AT1G08270.1 75.758 132 22 1 33 164 1 122 4.04e-59 193
Msa0200950 AT1G08270.2 74.242 132 24 1 33 164 1 122 9.58e-58 189
Msa0200950 AT3G27120.1 32.877 365 179 6 106 461 369 676 1.73e-53 193
Msa0200950 AT1G50140.3 38.224 259 120 7 132 382 711 937 6.04e-43 165
Msa0200950 AT1G50140.1 38.224 259 120 7 132 382 711 937 6.04e-43 165
Msa0200950 AT1G50140.4 38.224 259 120 7 132 382 711 937 6.04e-43 165
Msa0200950 AT1G50140.2 38.224 259 120 7 132 382 689 915 6.75e-43 165
Msa0200950 AT1G50140.5 38.224 259 120 7 132 382 689 915 6.75e-43 165
Msa0200950 AT3G19740.1 37.984 258 122 6 132 382 701 927 1.79e-42 164
Msa0200950 AT1G64110.1 36.260 262 128 6 128 382 509 738 2.95e-41 159
Msa0200950 AT1G64110.5 36.260 262 128 6 128 382 512 741 3.01e-41 159
Msa0200950 AT1G64110.3 36.260 262 128 6 128 382 512 741 3.01e-41 159
Msa0200950 AT1G64110.2 36.260 262 128 6 128 382 514 743 3.03e-41 159
Msa0200950 AT1G64110.4 36.260 262 128 6 128 382 514 743 3.03e-41 159
Msa0200950 AT4G28000.3 35.409 257 128 6 132 382 517 741 1.65e-40 157
Msa0200950 AT4G28000.2 35.409 257 128 6 132 382 517 741 1.70e-40 157
Msa0200950 AT4G28000.1 35.409 257 128 6 132 382 515 739 1.77e-40 157
Msa0200950 AT5G52882.1 35.409 257 128 6 132 382 514 738 3.08e-39 154
Msa0200950 AT4G02480.1 34.884 258 130 7 132 382 960 1186 2.21e-38 152
Msa0200950 AT4G24860.4 35.632 261 127 7 121 372 779 1007 2.40e-38 151
Msa0200950 AT4G24860.1 35.632 261 127 7 121 372 806 1034 2.65e-38 151
Msa0200950 AT4G24860.2 35.632 261 127 7 121 372 802 1030 2.87e-38 151
Msa0200950 AT4G24860.3 35.632 261 127 7 121 372 804 1032 2.98e-38 151
Msa0200950 AT1G02890.1 35.000 260 127 9 132 382 941 1167 2.78e-37 148
Msa0200950 AT5G53540.1 32.704 318 151 10 131 444 83 341 1.02e-36 141
Msa0200950 AT4G27680.1 32.075 318 153 10 131 444 80 338 4.46e-35 137
Msa0200950 AT5G03340.1 35.200 250 128 9 128 371 473 694 5.93e-33 134
Msa0200950 AT5G03340.1 31.154 260 145 9 132 387 204 433 3.60e-27 117
Msa0200950 AT3G53230.1 35.317 252 129 9 126 371 472 695 6.09e-33 134
Msa0200950 AT3G53230.1 31.154 260 145 9 132 387 205 434 5.19e-27 116
Msa0200950 AT3G09840.1 34.783 253 130 9 126 371 471 695 1.01e-30 128
Msa0200950 AT3G09840.1 31.034 261 146 9 131 387 203 433 1.92e-27 117
Msa0200950 AT5G43010.1 32.342 269 144 13 125 385 128 366 5.01e-30 122
Msa0200950 AT1G06430.1 34.767 279 144 11 117 387 200 448 1.11e-29 124
Msa0200950 AT1G06430.3 34.767 279 144 11 117 387 200 448 1.11e-29 124
Msa0200950 AT1G06430.2 34.767 279 144 11 117 387 200 448 1.11e-29 124
Msa0200950 AT2G30950.1 34.050 279 146 11 117 387 207 455 2.42e-29 123
Msa0200950 AT2G30950.2 34.050 279 146 11 117 387 207 455 2.42e-29 123
Msa0200950 AT2G30950.3 34.050 279 146 11 117 387 207 455 2.42e-29 123
Msa0200950 AT2G30950.4 34.050 279 146 11 117 387 211 459 2.63e-29 123
Msa0200950 AT1G45000.1 32.472 271 141 14 125 385 128 366 2.71e-29 120
Msa0200950 AT1G62130.2 31.707 246 123 8 132 372 743 948 4.18e-29 123
Msa0200950 AT1G62130.1 31.707 246 123 8 132 372 750 955 4.51e-29 123
Msa0200950 AT1G02890.2 32.685 257 109 9 132 382 941 1139 5.28e-29 123
Msa0200950 AT1G53750.1 32.847 274 138 12 112 373 145 384 1.06e-28 119
Msa0200950 AT3G02450.1 32.836 268 139 11 128 387 327 561 1.62e-28 120
Msa0200950 AT2G03670.1 36.154 260 122 10 120 368 271 497 2.39e-28 120
Msa0200950 AT1G09100.1 32.283 254 138 9 126 373 161 386 1.07e-27 116
Msa0200950 AT3G56690.1 33.453 278 137 11 110 374 697 939 1.14e-27 119
Msa0200950 AT3G56690.1 31.081 222 123 6 166 385 416 609 1.15e-21 100
Msa0200950 AT3G05530.1 31.765 255 138 10 126 373 162 387 1.95e-27 115
Msa0200950 AT5G15250.1 32.374 278 146 12 120 387 207 452 2.44e-27 117
Msa0200950 AT5G42270.1 34.630 257 132 10 132 382 247 473 6.93e-27 115
Msa0200950 AT5G58290.1 32.319 263 143 9 128 384 148 381 7.46e-27 113
Msa0200950 AT5G53170.1 33.721 258 131 11 121 372 348 571 1.22e-25 112
Msa0200950 AT1G50250.1 33.588 262 128 11 132 382 259 485 1.57e-25 112
Msa0200950 AT1G53780.1 30.996 271 147 11 112 373 317 556 1.58e-25 111
Msa0200950 AT1G53780.4 30.996 271 147 11 112 373 317 556 1.58e-25 111
Msa0200950 AT1G53780.3 30.996 271 147 11 112 373 316 555 1.71e-25 111
Msa0200950 AT4G29040.1 29.252 294 158 12 126 398 179 443 1.71e-25 109
Msa0200950 AT1G53780.2 31.387 274 142 12 112 373 338 577 1.79e-25 111
Msa0200950 AT2G20140.1 29.252 294 158 12 126 398 179 443 2.16e-25 109
Msa0200950 AT1G03000.1 30.116 259 147 8 130 382 653 883 1.15e-24 109
Msa0200950 AT2G26140.1 31.707 246 133 10 131 372 223 437 1.64e-24 108
Msa0200950 AT1G07510.1 34.074 270 138 11 118 377 310 549 4.75e-24 107
Msa0200950 AT3G15120.2 30.522 249 144 8 134 377 728 952 6.68e-24 107
Msa0200950 AT3G15120.1 30.522 249 144 8 134 377 718 942 6.91e-24 107
Msa0200950 AT5G15250.2 30.233 301 145 13 120 387 207 475 1.39e-23 104
Msa0200950 AT2G29080.1 34.328 268 139 11 118 377 305 543 2.80e-22 102
Msa0200950 AT3G47060.1 29.373 303 153 9 91 384 303 553 1.46e-21 99.8
Msa0200950 AT3G16290.1 33.071 254 124 10 131 373 406 624 1.54e-21 99.8
Msa0200950 AT5G58870.1 31.154 260 146 8 131 384 325 557 5.74e-21 97.8
Msa0200950 AT1G05910.1 29.960 247 146 7 131 373 377 600 8.04e-21 97.8
Msa0200950 AT4G04180.2 28.713 303 154 13 96 371 262 529 2.95e-20 95.1
Msa0200950 AT4G04180.1 29.528 254 130 10 132 371 316 534 3.47e-20 94.7
Msa0200950 AT3G01610.1 30.400 250 128 9 134 368 232 450 5.00e-19 91.7
Msa0200950 AT3G01610.2 30.400 250 128 9 134 368 232 450 5.27e-19 91.7
Msa0200950 AT2G03670.2 34.659 176 85 6 121 292 272 421 4.00e-13 72.0
Msa0200950 AT4G36580.1 25.207 242 113 7 167 375 381 587 3.63e-11 66.2

Find 148 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATTGCTTGCTCTCTTAA+AGG 0.146901 2_1:+21649592 Msa0200950:CDS
CTTTGAGCCATTTGAGAAAA+AGG 0.176433 2_1:-21650226 None:intergenic
GGTTGAATTCTGCGATTATT+AGG 0.186943 2_1:+21647978 Msa0200950:CDS
CTGCAAGAACAAGAACTTTC+TGG 0.202134 2_1:-21651392 None:intergenic
AAAAGGGAAACCCTAGAAAT+TGG 0.216790 2_1:-21647527 None:intergenic
CACCATCTTCCCCAATTTCT+AGG 0.226084 2_1:+21647516 Msa0200950:five_prime_UTR
GATTCAAATATACACAATTT+AGG 0.234814 2_1:-21652499 None:intergenic
AAGGATGGTGGTGGGGAGGG+TGG 0.244754 2_1:+21647908 Msa0200950:CDS
GGTGGGGAGGGTGGTGGAGG+TGG 0.245687 2_1:+21647917 Msa0200950:CDS
GATGGTGGTGGGGAGGGTGG+TGG 0.246166 2_1:+21647911 Msa0200950:CDS
TCAAAATCTGTTCTTGTAAT+GGG 0.258427 2_1:-21652205 None:intergenic
TCCCCGAAAATAACATAAAA+AGG 0.262830 2_1:-21652415 None:intergenic
GGTGGTGGGGAGGGTGGTGG+AGG 0.266118 2_1:+21647914 Msa0200950:CDS
GTGCTTGATGACGGTGGGCC+AGG 0.284572 2_1:+21647833 Msa0200950:CDS
TTCAAAATCTGTTCTTGTAA+TGG 0.305475 2_1:-21652206 None:intergenic
TGGTGATCTGATCGGGAATA+AGG 0.308359 2_1:-21647492 None:intergenic
GAGAGATTCACAAAGGAGTT+TGG 0.323238 2_1:+21652283 Msa0200950:CDS
GGCCCGCCAACACATGTTTA+AGG 0.326809 2_1:+21651577 Msa0200950:CDS
GTTGAATTCTGCGATTATTA+GGG 0.328089 2_1:+21647979 Msa0200950:CDS
TCTAAAGCGTTCATGTATAA+AGG 0.341061 2_1:-21647707 None:intergenic
GAGTGCTAAACAGGCTTTGC+AGG 0.354509 2_1:+21648042 Msa0200950:CDS
GGGGAAGGATGGTGGTGGGG+AGG 0.359432 2_1:+21647904 Msa0200950:CDS
ATTTGTATTTGCAGGCAATA+AGG 0.365094 2_1:+21651510 Msa0200950:intron
AAAGGGAAACCCTAGAAATT+GGG 0.373360 2_1:-21647526 None:intergenic
GGGAATAAGGGAGGAAGAAA+AGG 0.375046 2_1:-21647479 None:intergenic
AAAGAAGAACATAGCATCTT+GGG 0.376196 2_1:-21651925 None:intergenic
TACGTCGTGCTGAGGAGATC+AGG 0.383073 2_1:+21647807 Msa0200950:CDS
TAAAGAAGAACATAGCATCT+TGG 0.387294 2_1:-21651926 None:intergenic
TATTCCACTACCAGATTTGA+AGG 0.389227 2_1:+21651556 Msa0200950:CDS
TAAGGGGAAGGATGGTGGTG+GGG 0.390562 2_1:+21647901 Msa0200950:CDS
TCCTCATAATTTAACTGAAA+AGG 0.391490 2_1:+21651723 Msa0200950:CDS
TAAATCAACCTCCGCACAAT+CGG 0.391564 2_1:-21652448 None:intergenic
GGGAAGGATGGTGGTGGGGA+GGG 0.396231 2_1:+21647905 Msa0200950:CDS
TTGTATGGACCTCCTGGAAC+TGG 0.396491 2_1:+21649372 Msa0200950:CDS
CCCTGTTGCTTTGGTCCACA+TGG 0.396687 2_1:-21651972 None:intergenic
CCCATGTGGACCAAAGCAAC+AGG 0.401299 2_1:+21651971 Msa0200950:CDS
GGCATTAAAATTTGAACTGC+AGG 0.401561 2_1:+21649613 Msa0200950:CDS
TGAATCTCTCATGAACTTCA+AGG 0.403290 2_1:-21652270 None:intergenic
TGGGTTGGAGAGTGCTAAAC+AGG 0.403615 2_1:+21648033 Msa0200950:CDS
TGAACTGCGCCCTGTTGCTT+TGG 0.404749 2_1:-21651981 None:intergenic
TCCGGCATTGTCTTCGTGTA+CGG 0.414643 2_1:-21647666 None:intergenic
ATTCATTAAAGATGCTGGTT+AGG 0.417064 2_1:+21652687 Msa0200950:CDS
GAGGGTGGTGGAGGTGGTGA+AGG 0.417655 2_1:+21647923 Msa0200950:CDS
TGTTGGCGGGCCTTCAAATC+TGG 0.417810 2_1:-21651566 None:intergenic
CTTCTCCACGCTGGCCACAT+AGG 0.417992 2_1:-21650278 None:intergenic
AGTAAGGGGAAGGATGGTGG+TGG 0.426631 2_1:+21647899 Msa0200950:CDS
ACGAATCAAAACAGAACTTC+TGG 0.429142 2_1:+21650323 Msa0200950:CDS
ACAAAGGAGTTTGGAGAAGA+AGG 0.429561 2_1:+21652292 Msa0200950:CDS
AACGATGTATAGCAATTTCA+AGG 0.438031 2_1:+21647616 Msa0200950:exon
GAGGAAGAAAAGGGGAAAGA+TGG 0.445165 2_1:-21647469 None:intergenic
GCTCTAAGCTTCGCCTGCTC+CGG 0.446126 2_1:-21647953 None:intergenic
ACATCATTCCACTTAACATT+CGG 0.446378 2_1:-21648007 None:intergenic
GGTGATCTGATCGGGAATAA+GGG 0.448114 2_1:-21647491 None:intergenic
GGGCCAGGGCCAGCTTCTAA+TGG 0.448570 2_1:+21647848 Msa0200950:CDS
GGAATAAGGGAGGAAGAAAA+GGG 0.456910 2_1:-21647478 None:intergenic
CCATCCTTCCCCTTACTCTT+CGG 0.459708 2_1:-21647893 None:intergenic
TGCTACGAGGCCGAAGAGTA+AGG 0.461247 2_1:+21647883 Msa0200950:CDS
ACTGAATTCATTAAAGATGC+TGG 0.463463 2_1:+21652682 Msa0200950:CDS
GTGGAATGATGTTGCTGGGT+TGG 0.467137 2_1:+21648018 Msa0200950:CDS
TCGCCATTAGAAGCTGGCCC+TGG 0.467828 2_1:-21647851 None:intergenic
TAAATTGAGCAGGTGCATCT+TGG 0.468085 2_1:+21651694 Msa0200950:intron
AGATCTTGTTTCAAAGTGGA+TGG 0.468719 2_1:+21650178 Msa0200950:intron
TTAAGAGTCCTGAGGGTATG+TGG 0.469882 2_1:+21651946 Msa0200950:CDS
GTTAAGTGGAATGATGTTGC+TGG 0.471480 2_1:+21648013 Msa0200950:CDS
CTTACCTGGTCTAAAGCATA+AGG 0.474963 2_1:-21651426 None:intergenic
CTGATTACAAGGATTATCCT+TGG 0.477386 2_1:+21649524 Msa0200950:intron
TGAAAAGGATTATGAATACT+TGG 0.477851 2_1:+21651738 Msa0200950:CDS
GTAAGGGGAAGGATGGTGGT+GGG 0.478141 2_1:+21647900 Msa0200950:CDS
TGCCTTAAACATGTGTTGGC+GGG 0.478809 2_1:-21651579 None:intergenic
GTCATGGTGGTTGCTTATGT+TGG 0.479616 2_1:+21652547 Msa0200950:CDS
ATTATGAATACTTGGCTAGC+AGG 0.480856 2_1:+21651746 Msa0200950:CDS
TTGCCTTAAACATGTGTTGG+CGG 0.483730 2_1:-21651580 None:intergenic
TTCTTCTTTAAGAGTCCTGA+GGG 0.484201 2_1:+21651939 Msa0200950:CDS
AGAACTTCTGGTGCAGATGC+AGG 0.485421 2_1:+21650335 Msa0200950:CDS
ATGACGGATCTTGCTACAAA+AGG 0.487123 2_1:+21652011 Msa0200950:CDS
TGGTGGAGGTGGTGAAGGAG+AGG 0.488082 2_1:+21647928 Msa0200950:CDS
CCCTTGCCTTAAACATGTGT+TGG 0.488382 2_1:-21651583 None:intergenic
ACCATCTTCCCCAATTTCTA+GGG 0.488630 2_1:+21647517 Msa0200950:five_prime_UTR
AGGTGGTGAAGGAGAGGATC+CGG 0.491616 2_1:+21647934 Msa0200950:CDS
TGCTTGATGACGGTGGGCCA+GGG 0.491756 2_1:+21647834 Msa0200950:CDS
ACCCTAGAAATTGGGGAAGA+TGG 0.492721 2_1:-21647518 None:intergenic
TTCTCCACGCTGGCCACATA+GGG 0.495975 2_1:-21650277 None:intergenic
CATCAGATCTTGTTTCAAAG+TGG 0.499401 2_1:+21650174 Msa0200950:intron
AGAAAAGGGGAAAGATGGAT+TGG 0.499472 2_1:-21647464 None:intergenic
CAAAATCTGTTCTTGTAATG+GGG 0.501472 2_1:-21652204 None:intergenic
AGCCTCAGTTGCAACTGCCT+TGG 0.502214 2_1:-21649409 None:intergenic
CTATGTGGCCAGCGTGGAGA+AGG 0.514378 2_1:+21650279 Msa0200950:CDS
AAAAGGTTCTTGCTAGGCAA+AGG 0.518856 2_1:+21652227 Msa0200950:CDS
TACAAAAGGACTTGCTTCAA+AGG 0.521759 2_1:+21652025 Msa0200950:CDS
GAGCAGGCGAAGCTTAGAGC+GGG 0.525277 2_1:+21647956 Msa0200950:CDS
AAATCAACCTCCGCACAATC+GGG 0.529888 2_1:-21652447 None:intergenic
GCGGCATCGCCATTAGAAGC+TGG 0.534830 2_1:-21647857 None:intergenic
ATGGTGGTGGTGATCTGATC+GGG 0.537326 2_1:-21647499 None:intergenic
GGGAAAAGCCGAATGTTAAG+TGG 0.537432 2_1:+21647999 Msa0200950:CDS
CGGGCCTTCAAATCTGGTAG+TGG 0.539272 2_1:-21651560 None:intergenic
AAAATCTGTTCTTGTAATGG+GGG 0.541123 2_1:-21652203 None:intergenic
TGAAGGAGAGGATCCGGAGC+AGG 0.541483 2_1:+21647940 Msa0200950:CDS
AGCTTCTAATGGCGATGCCG+CGG 0.546566 2_1:+21647859 Msa0200950:CDS
CCGAAGAGTAAGGGGAAGGA+TGG 0.547863 2_1:+21647893 Msa0200950:CDS
GCTACGAGGCCGAAGAGTAA+GGG 0.547998 2_1:+21647884 Msa0200950:CDS
CGGAGGTTGATTTATTACGA+TGG 0.548713 2_1:+21652457 Msa0200950:CDS
TACTTGGCTAGCAGGACAGA+GGG 0.548985 2_1:+21651754 Msa0200950:CDS
GAGAATATGATTTCATTCCA+AGG 0.558586 2_1:-21649541 None:intergenic
CCTGTTGCTTTGGTCCACAT+GGG 0.563250 2_1:-21651971 None:intergenic
CGCAGTTCAAACTACAATGA+CGG 0.571283 2_1:+21651995 Msa0200950:CDS
GTTCTTCTTTAAGAGTCCTG+AGG 0.572301 2_1:+21651938 Msa0200950:CDS
TGGAAAATCATATTTAGCCA+AGG 0.574973 2_1:+21649392 Msa0200950:CDS
GATCTTGTTTCAAAGTGGAT+GGG 0.577099 2_1:+21650179 Msa0200950:intron
GATGGTGGTGGTGATCTGAT+CGG 0.578672 2_1:-21647500 None:intergenic
AAGGGAAACCCTAGAAATTG+GGG 0.579108 2_1:-21647525 None:intergenic
CACACCTTATGCTTTAGACC+AGG 0.580873 2_1:+21651422 Msa0200950:CDS
AGCCAAGGCAGTTGCAACTG+AGG 0.584896 2_1:+21649407 Msa0200950:CDS
AGGGCTGTGCTTGATGACGG+TGG 0.587321 2_1:+21647827 Msa0200950:CDS
ACGTCGTGCTGAGGAGATCA+GGG 0.588419 2_1:+21647808 Msa0200950:CDS
CTCAGCACGACGTAAATACT+CGG 0.590884 2_1:-21647798 None:intergenic
AAGAGTAAGGGGAAGGATGG+TGG 0.591605 2_1:+21647896 Msa0200950:CDS
ATCAGGGCTGTGCTTGATGA+CGG 0.592760 2_1:+21647824 Msa0200950:CDS
TCTCATTGCCTTCTCCACGC+TGG 0.597326 2_1:-21650287 None:intergenic
GCCGTACACGAAGACAATGC+CGG 0.598847 2_1:+21647665 Msa0200950:CDS
CGAGTATTTACGTCGTGCTG+AGG 0.603573 2_1:+21647799 Msa0200950:CDS
CATGGGATCCACATACCCTC+AGG 0.604619 2_1:-21651954 None:intergenic
TTAAGTGGAATGATGTTGCT+GGG 0.607930 2_1:+21648014 Msa0200950:CDS
AATGAAATCATATTCTCAAG+TGG 0.608314 2_1:+21649547 Msa0200950:CDS
GGGCTGTGCTTGATGACGGT+GGG 0.609283 2_1:+21647828 Msa0200950:CDS
CTACGAGGCCGAAGAGTAAG+GGG 0.613832 2_1:+21647885 Msa0200950:CDS
ATGTGAAGTTCCCGATTGTG+CGG 0.613924 2_1:+21652437 Msa0200950:CDS
CCACTCATATTGTAGGGTGT+AGG 0.618221 2_1:+21651360 Msa0200950:intron
GCGATGCCGCGGTTGCTACG+AGG 0.619805 2_1:+21647870 Msa0200950:CDS
AAATCTGTTCTTGTAATGGG+GGG 0.629544 2_1:-21652202 None:intergenic
GAAATTGGGGAAGATGGTGG+TGG 0.634910 2_1:-21647512 None:intergenic
TAGAAAACTAACTTGTGTCA+TGG 0.636740 2_1:+21652531 Msa0200950:CDS
TGAAGTTCCCGATTGTGCGG+AGG 0.638548 2_1:+21652440 Msa0200950:CDS
GATGAAATAGATTCCCTATG+TGG 0.643720 2_1:+21650264 Msa0200950:CDS
CTAGAAATTGGGGAAGATGG+TGG 0.644288 2_1:-21647515 None:intergenic
GAATAAGGGAGGAAGAAAAG+GGG 0.646338 2_1:-21647477 None:intergenic
GAGGCCGAAGAGTAAGGGGA+AGG 0.649712 2_1:+21647889 Msa0200950:CDS
GAGGGTATGTGGATCCCATG+TGG 0.666781 2_1:+21651957 Msa0200950:CDS
GGAGCAGGCGAAGCTTAGAG+CGG 0.673581 2_1:+21647955 Msa0200950:CDS
CCATGTGGACCAAAGCAACA+GGG 0.676849 2_1:+21651972 Msa0200950:CDS
AGCAGGCGAAGCTTAGAGCG+GGG 0.677406 2_1:+21647957 Msa0200950:CDS
ATACTTGGCTAGCAGGACAG+AGG 0.680894 2_1:+21651753 Msa0200950:CDS
GATTCCCTATGTGGCCAGCG+TGG 0.682011 2_1:+21650273 Msa0200950:CDS
CTTCGGCCTCGTAGCAACCG+CGG 0.685179 2_1:-21647876 None:intergenic
GATCTGATCGGGAATAAGGG+AGG 0.699636 2_1:-21647488 None:intergenic
AGTTCATGAGAGATTCACAA+AGG 0.699715 2_1:+21652276 Msa0200950:CDS
TTTCAGGTAAAAGACGACCA+TGG 0.700290 2_1:+21649337 Msa0200950:intron
ACTTGGCTAGCAGGACAGAG+GGG 0.708147 2_1:+21651755 Msa0200950:CDS
AAAACTAACTTGTGTCATGG+TGG 0.713532 2_1:+21652534 Msa0200950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATATAACAAAAATTC+AGG - chr2_1:21651630-21651649 None:intergenic 10.0%
!! TATGAAAAATTGAAAATTGA+GGG - chr2_1:21647572-21647591 None:intergenic 15.0%
!!! TCATTTTCTTAAATTATTAC+TGG - chr2_1:21648462-21648481 None:intergenic 15.0%
!! AATTTAAGAAAATGATTTAC+CGG + chr2_1:21648467-21648486 Msa0200950:intron 15.0%
!!! TTGTATTTTATTTAGGTTTT+TGG - chr2_1:21649716-21649735 None:intergenic 15.0%
!! AATAATATAGTAATTTCCAT+AGG - chr2_1:21649755-21649774 None:intergenic 15.0%
!! ATAGGTAAAAAAATGATATA+GGG - chr2_1:21649817-21649836 None:intergenic 15.0%
!! TATAGGTAAAAAAATGATAT+AGG - chr2_1:21649818-21649837 None:intergenic 15.0%
!! TCTTTATCTTATCAATATAT+AGG - chr2_1:21649835-21649854 None:intergenic 15.0%
!! TGGAAATATTCAATAAATAA+AGG - chr2_1:21650473-21650492 None:intergenic 15.0%
!!! TTTTTTTTACAGAAATGATT+TGG - chr2_1:21650493-21650512 None:intergenic 15.0%
!!! TTTTTTTTTTATGTGTGATT+TGG - chr2_1:21650520-21650539 None:intergenic 15.0%
!! AAATAAAGAGAAATACAAAA+AGG - chr2_1:21651328-21651347 None:intergenic 15.0%
!! GTATGAAAAATTGAAAATTG+AGG - chr2_1:21647573-21647592 None:intergenic 20.0%
!!! GTTTTTTTCGTACTTTAAAT+GGG - chr2_1:21647744-21647763 None:intergenic 20.0%
!!! GTTGTTTTTATATGATATCA+TGG + chr2_1:21648219-21648238 Msa0200950:intron 20.0%
!! AATAAGCTGAAAACAATTTA+TGG + chr2_1:21648254-21648273 Msa0200950:intron 20.0%
!! ATAAGCTGAAAACAATTTAT+GGG + chr2_1:21648255-21648274 Msa0200950:intron 20.0%
!! ATACAAAATTGCAAATCTTA+AGG + chr2_1:21648994-21649013 Msa0200950:intron 20.0%
!! TACAAAATTGCAAATCTTAA+GGG + chr2_1:21648995-21649014 Msa0200950:intron 20.0%
!! AACTTTAATGATATATTGAC+AGG + chr2_1:21649239-21649258 Msa0200950:intron 20.0%
!! AAATTGTTCTATTGTTTACA+TGG + chr2_1:21649452-21649471 Msa0200950:intron 20.0%
!! GTTAAAGAAATTTCTACATT+AGG + chr2_1:21649494-21649513 Msa0200950:intron 20.0%
!! AATTCTACTTAAATACCAAA+TGG - chr2_1:21649666-21649685 None:intergenic 20.0%
!!! TAGGACTTTGTATTTTATTT+AGG - chr2_1:21649723-21649742 None:intergenic 20.0%
!! AAAAAAATGATATAGGGTAA+AGG - chr2_1:21649811-21649830 None:intergenic 20.0%
!! TTGATAAGATAAAGATGAAA+AGG + chr2_1:21649840-21649859 Msa0200950:intron 20.0%
!! TGATAAGATAAAGATGAAAA+GGG + chr2_1:21649841-21649860 Msa0200950:intron 20.0%
!! TTTCTGTATTGTTATGAATT+AGG + chr2_1:21650089-21650108 Msa0200950:intron 20.0%
!!! CAAAAGTTAAAAATGCTTTT+AGG - chr2_1:21650133-21650152 None:intergenic 20.0%
!!! TTTTTAAATGTAGTTTTCCT+TGG + chr2_1:21650613-21650632 Msa0200950:intron 20.0%
!!! AATGCTTCAATTTTTTATGT+TGG + chr2_1:21650725-21650744 Msa0200950:intron 20.0%
!!! TTTTTGTAGGCATTTTTTTA+GGG - chr2_1:21650917-21650936 None:intergenic 20.0%
!!! AAAAATATCGTTTAAAACGA+AGG - chr2_1:21650949-21650968 None:intergenic 20.0%
!! TTGCTTCTTATTAGTATATT+GGG + chr2_1:21651053-21651072 Msa0200950:intron 20.0%
!! AGAACATAAACAAAAAATGT+TGG - chr2_1:21651305-21651324 None:intergenic 20.0%
!! TTATATATAAACCTAGCAAA+TGG + chr2_1:21651639-21651658 Msa0200950:intron 20.0%
!!! AACGTGTCATTTTATTTTTT+TGG + chr2_1:21651666-21651685 Msa0200950:intron 20.0%
!!! AAAAACTTTTTAATCTCTTC+AGG + chr2_1:21651869-21651888 Msa0200950:intron 20.0%
!!! TGGTTGTATTTTTTTGAAAT+TGG + chr2_1:21652079-21652098 Msa0200950:intron 20.0%
!!! TTTTTTGAAATTGGAGAAAT+AGG + chr2_1:21652088-21652107 Msa0200950:intron 20.0%
!!! TTTTTGAAATTGGAGAAATA+GGG + chr2_1:21652089-21652108 Msa0200950:intron 20.0%
!!! AATTATAACACATCTAAAAC+TGG - chr2_1:21652358-21652377 None:intergenic 20.0%
!!! CATCCTTTTTATGTTATTTT+CGG + chr2_1:21652412-21652431 Msa0200950:CDS 20.0%
!!! ATCCTTTTTATGTTATTTTC+GGG + chr2_1:21652413-21652432 Msa0200950:CDS 20.0%
!! GATTCAAATATACACAATTT+AGG - chr2_1:21652502-21652521 None:intergenic 20.0%
!! TTTCATCTTGTAAAAAAAGA+TGG + chr2_1:21652605-21652624 Msa0200950:CDS 20.0%
! ATTTGTGTGTGAAGAAAAAA+GGG - chr2_1:21647546-21647565 None:intergenic 25.0%
!!! GGTTTTTTTCGTACTTTAAA+TGG - chr2_1:21647745-21647764 None:intergenic 25.0%
!! TAATTGCTTCTCTGATTTTA+GGG - chr2_1:21647766-21647785 None:intergenic 25.0%
!!! AAGTTTCCTCAATTTTTTAC+TGG + chr2_1:21648085-21648104 Msa0200950:CDS 25.0%
!! TTTGTTGTCTTCTCAATATT+AGG + chr2_1:21648754-21648773 Msa0200950:intron 25.0%
! ATTATGCATAAAGAACTAGA+AGG + chr2_1:21648822-21648841 Msa0200950:intron 25.0%
! AAATCAATATGATCAATCCT+TGG - chr2_1:21648897-21648916 None:intergenic 25.0%
!!! AGGATTGATCATATTGATTT+TGG + chr2_1:21648897-21648916 Msa0200950:intron 25.0%
!! ACAATTTTACCTGAAAAATG+TGG - chr2_1:21649439-21649458 None:intergenic 25.0%
! AATGAAATCATATTCTCAAG+TGG + chr2_1:21649547-21649566 Msa0200950:CDS 25.0%
!!! TTATTTAGGTTTTTGGCATT+TGG - chr2_1:21649709-21649728 None:intergenic 25.0%
! AAAATGAACATGATGTATCT+TGG + chr2_1:21649866-21649885 Msa0200950:intron 25.0%
!!! TTTTTTTGACGAATAAAGCA+TGG - chr2_1:21650024-21650043 None:intergenic 25.0%
!! TTTCAAACCTTTTTCTCAAA+TGG + chr2_1:21650219-21650238 Msa0200950:CDS 25.0%
! AACATTGTAATCAGTTTAGT+TGG + chr2_1:21650388-21650407 Msa0200950:intron 25.0%
! CAGTTATATAGTGTAATATG+TGG + chr2_1:21650445-21650464 Msa0200950:intron 25.0%
! AGCATTAATTACGAATTAAC+AGG - chr2_1:21650711-21650730 None:intergenic 25.0%
!!! GTTTTTGTAGGCATTTTTTT+AGG - chr2_1:21650918-21650937 None:intergenic 25.0%
! CAATATACTAATAAGAAGCA+AGG - chr2_1:21651054-21651073 None:intergenic 25.0%
! CTTGCTTCTTATTAGTATAT+TGG + chr2_1:21651052-21651071 Msa0200950:intron 25.0%
! AATGATGTAAATATTAGCGA+TGG - chr2_1:21651193-21651212 None:intergenic 25.0%
! ATCGCTAATATTTACATCAT+TGG + chr2_1:21651192-21651211 Msa0200950:intron 25.0%
!!! AGAATTATTTTTGTCTTACC+TGG - chr2_1:21651443-21651462 None:intergenic 25.0%
! TCTAATCAATTTGTATTTGC+AGG + chr2_1:21651502-21651521 Msa0200950:intron 25.0%
! TCCTCATAATTTAACTGAAA+AGG + chr2_1:21651723-21651742 Msa0200950:CDS 25.0%
!! TCCTTTTCAGTTAAATTATG+AGG - chr2_1:21651727-21651746 None:intergenic 25.0%
! TGAAAAGGATTATGAATACT+TGG + chr2_1:21651738-21651757 Msa0200950:CDS 25.0%
! AAGAAATTCATCCAAGTAAA+AGG - chr2_1:21651847-21651866 None:intergenic 25.0%
! ACATATCTTTAATTGACATG+AGG + chr2_1:21652140-21652159 Msa0200950:intron 25.0%
! TCAAAATCTGTTCTTGTAAT+GGG - chr2_1:21652208-21652227 None:intergenic 25.0%
! TTCAAAATCTGTTCTTGTAA+TGG - chr2_1:21652209-21652228 None:intergenic 25.0%
!!! TACAAGAACAGATTTTGAAA+AGG + chr2_1:21652210-21652229 Msa0200950:CDS 25.0%
!!! TCCTTTTTATGTTATTTTCG+GGG + chr2_1:21652414-21652433 Msa0200950:CDS 25.0%
GATTTGTGTGTGAAGAAAAA+AGG - chr2_1:21647547-21647566 None:intergenic 30.0%
GAAAAATTGAAAATTGAGGG+AGG - chr2_1:21647569-21647588 None:intergenic 30.0%
AACGATGTATAGCAATTTCA+AGG + chr2_1:21647616-21647635 Msa0200950:exon 30.0%
! AAACGCTTTTGAATAGTTTC+CGG - chr2_1:21647687-21647706 None:intergenic 30.0%
! TCTAAAGCGTTCATGTATAA+AGG - chr2_1:21647710-21647729 None:intergenic 30.0%
! GTAATTGCTTCTCTGATTTT+AGG - chr2_1:21647767-21647786 None:intergenic 30.0%
GTTGAATTCTGCGATTATTA+GGG + chr2_1:21647979-21647998 Msa0200950:CDS 30.0%
ACATCATTCCACTTAACATT+CGG - chr2_1:21648010-21648029 None:intergenic 30.0%
AAAAATTGAGGAAACTTGAC+AGG - chr2_1:21648082-21648101 None:intergenic 30.0%
!!! TTTCCTCAATTTTTTACTGG+TGG + chr2_1:21648088-21648107 Msa0200950:intron 30.0%
!!! TTCCTCAATTTTTTACTGGT+GGG + chr2_1:21648089-21648108 Msa0200950:intron 30.0%
ATTATTGTCTTTGTCGTGTT+TGG + chr2_1:21648121-21648140 Msa0200950:intron 30.0%
TAGTTCAATCCATATCGAAA+TGG + chr2_1:21648630-21648649 Msa0200950:intron 30.0%
! CAATTAATTGAAGGTGTGTT+TGG - chr2_1:21648713-21648732 None:intergenic 30.0%
CTGACACTTCAATTAATTGA+AGG - chr2_1:21648722-21648741 None:intergenic 30.0%
!!! GATTGTGTTTGTGTCTTTTT+TGG + chr2_1:21648844-21648863 Msa0200950:intron 30.0%
AAGATTGGATATCAATACCA+AGG + chr2_1:21648877-21648896 Msa0200950:intron 30.0%
!!! CATATTGATTTTGGTATGCA+AGG + chr2_1:21648906-21648925 Msa0200950:intron 30.0%
!! AGTTGGCAAGTTTGTTAATT+TGG + chr2_1:21648949-21648968 Msa0200950:intron 30.0%
! CATGTTTTCAATGTTTTGTG+CGG + chr2_1:21649102-21649121 Msa0200950:intron 30.0%
!! AAAACTTTGAAACCATGAAG+TGG + chr2_1:21649145-21649164 Msa0200950:intron 30.0%
AGCGAAAGCAAGATTATATT+GGG + chr2_1:21649209-21649228 Msa0200950:intron 30.0%
ATCGAATGTGTATAGTTATG+TGG + chr2_1:21649277-21649296 Msa0200950:intron 30.0%
! AAATATGATTTTCCAGTTCC+AGG - chr2_1:21649387-21649406 None:intergenic 30.0%
TGGAAAATCATATTTAGCCA+AGG + chr2_1:21649392-21649411 Msa0200950:CDS 30.0%
GAGAATATGATTTCATTCCA+AGG - chr2_1:21649544-21649563 None:intergenic 30.0%
TACTTAAATACCAAATGGCT+AGG - chr2_1:21649661-21649680 None:intergenic 30.0%
AATTATGATGTATGTTGCTC+TGG + chr2_1:21649913-21649932 Msa0200950:intron 30.0%
ATTATGATGTATGTTGCTCT+GGG + chr2_1:21649914-21649933 Msa0200950:intron 30.0%
GAATAAAGCATGGAAAATTG+AGG - chr2_1:21650014-21650033 None:intergenic 30.0%
TTATGAATTAGGCACATAAG+TGG + chr2_1:21650100-21650119 Msa0200950:intron 30.0%
AAGATCTGATGAAGAAATAC+TGG - chr2_1:21650165-21650184 None:intergenic 30.0%
!!! CAGGTAATAGCTTTATGTTT+TGG + chr2_1:21650354-21650373 Msa0200950:intron 30.0%
ATACAAGCATGCACTTAAAT+GGG - chr2_1:21650575-21650594 None:intergenic 30.0%
AATACAAGCATGCACTTAAA+TGG - chr2_1:21650576-21650595 None:intergenic 30.0%
AGACTGACAAATAAAAACCA+AGG - chr2_1:21650633-21650652 None:intergenic 30.0%
! GCTTTTCAATTTCAAGAACT+TGG + chr2_1:21650662-21650681 Msa0200950:intron 30.0%
TTTCAATTTCAAGAACTTGG+AGG + chr2_1:21650665-21650684 Msa0200950:intron 30.0%
TATGTTGGAGTAGAAAATGT+TGG + chr2_1:21650740-21650759 Msa0200950:intron 30.0%
ATGTTGGAGTAGAAAATGTT+GGG + chr2_1:21650741-21650760 Msa0200950:intron 30.0%
!!! AAGGCTTAGTTTGTTTTTGT+AGG - chr2_1:21650930-21650949 None:intergenic 30.0%
! TGAATTTTTCTTGTCTTAGC+AGG + chr2_1:21650972-21650991 Msa0200950:intron 30.0%
TTCCTTTGTTCAGCATATTA+TGG + chr2_1:21651129-21651148 Msa0200950:intron 30.0%
! TCCTCTCTTACAATGTATTT+TGG + chr2_1:21651226-21651245 Msa0200950:intron 30.0%
! CCTCTCTTACAATGTATTTT+GGG + chr2_1:21651227-21651246 Msa0200950:intron 30.0%
AGTTTATCCACTCATATTGT+AGG + chr2_1:21651353-21651372 Msa0200950:intron 30.0%
GTTTATCCACTCATATTGTA+GGG + chr2_1:21651354-21651373 Msa0200950:intron 30.0%
ATTTGTATTTGCAGGCAATA+AGG + chr2_1:21651510-21651529 Msa0200950:intron 30.0%
! TTTTTAATCTCTTCAGGTGA+AGG + chr2_1:21651875-21651894 Msa0200950:intron 30.0%
AAAGAAGAACATAGCATCTT+GGG - chr2_1:21651928-21651947 None:intergenic 30.0%
TAAAGAAGAACATAGCATCT+TGG - chr2_1:21651929-21651948 None:intergenic 30.0%
! CGAGATACTATAGATTTTGA+TGG + chr2_1:21652052-21652071 Msa0200950:intron 30.0%
!!! ATCTGCATAAGTTTTAAGGT+GGG - chr2_1:21652175-21652194 None:intergenic 30.0%
! AAGGATCTGCATAAGTTTTA+AGG - chr2_1:21652179-21652198 None:intergenic 30.0%
AAAATCTGTTCTTGTAATGG+GGG - chr2_1:21652206-21652225 None:intergenic 30.0%
CAAAATCTGTTCTTGTAATG+GGG - chr2_1:21652207-21652226 None:intergenic 30.0%
!! ATTTTGAAAAGGTTCTTGCT+AGG + chr2_1:21652221-21652240 Msa0200950:CDS 30.0%
TCCCCGAAAATAACATAAAA+AGG - chr2_1:21652418-21652437 None:intergenic 30.0%
! TAGAAAACTAACTTGTGTCA+TGG + chr2_1:21652531-21652550 Msa0200950:CDS 30.0%
ACTGAATTCATTAAAGATGC+TGG + chr2_1:21652682-21652701 Msa0200950:CDS 30.0%
AAAGGGAAACCCTAGAAATT+GGG - chr2_1:21647529-21647548 None:intergenic 35.0%
AAAAGGGAAACCCTAGAAAT+TGG - chr2_1:21647530-21647549 None:intergenic 35.0%
GGTTGAATTCTGCGATTATT+AGG + chr2_1:21647978-21647997 Msa0200950:CDS 35.0%
TTAAGTGGAATGATGTTGCT+GGG + chr2_1:21648014-21648033 Msa0200950:CDS 35.0%
AACCCACCAGTAAAAAATTG+AGG - chr2_1:21648094-21648113 None:intergenic 35.0%
!!! TCAATTTTTTACTGGTGGGT+TGG + chr2_1:21648093-21648112 Msa0200950:intron 35.0%
CTTTGTCGTGTTTGGATAAA+CGG + chr2_1:21648129-21648148 Msa0200950:intron 35.0%
TAAGCAGTTATCGAGCATAT+AGG - chr2_1:21648167-21648186 None:intergenic 35.0%
AGGTTCGTTATTCCTTAAGT+GGG - chr2_1:21648534-21648553 None:intergenic 35.0%
TAGGTTCGTTATTCCTTAAG+TGG - chr2_1:21648535-21648554 None:intergenic 35.0%
TGTGAGGGTTTATATAGGAT+TGG + chr2_1:21648568-21648587 Msa0200950:intron 35.0%
GTGAGGGTTTATATAGGATT+GGG + chr2_1:21648569-21648588 Msa0200950:intron 35.0%
!!! TGTGTTTGTGTCTTTTTTGG+AGG + chr2_1:21648847-21648866 Msa0200950:intron 35.0%
!!! TTTGTGTCTTTTTTGGAGGA+GGG + chr2_1:21648851-21648870 Msa0200950:intron 35.0%
! AGCTTTTCACAGTTGAAAGT+TGG + chr2_1:21648932-21648951 Msa0200950:intron 35.0%
GAGCGAAAGCAAGATTATAT+TGG + chr2_1:21649208-21649227 Msa0200950:intron 35.0%
AATGTTTACTATGCTTCCTG+CGG + chr2_1:21649310-21649329 Msa0200950:intron 35.0%
TACAACAAAAATGCTCTCCA+TGG - chr2_1:21649357-21649376 None:intergenic 35.0%
!!! TGGAGAGCATTTTTGTTGTA+TGG + chr2_1:21649357-21649376 Msa0200950:CDS 35.0%
CAAGGATAATCCTTGTAATC+AGG - chr2_1:21649526-21649545 None:intergenic 35.0%
CTGATTACAAGGATTATCCT+TGG + chr2_1:21649524-21649543 Msa0200950:intron 35.0%
GGCATTAAAATTTGAACTGC+AGG + chr2_1:21649613-21649632 Msa0200950:CDS 35.0%
AAGCATGGAAAATTGAGGTA+TGG - chr2_1:21650009-21650028 None:intergenic 35.0%
! CATCAGATCTTGTTTCAAAG+TGG + chr2_1:21650174-21650193 Msa0200950:intron 35.0%
! AGATCTTGTTTCAAAGTGGA+TGG + chr2_1:21650178-21650197 Msa0200950:intron 35.0%
! GATCTTGTTTCAAAGTGGAT+GGG + chr2_1:21650179-21650198 Msa0200950:intron 35.0%
CTTTGAGCCATTTGAGAAAA+AGG - chr2_1:21650229-21650248 None:intergenic 35.0%
GATGAAATAGATTCCCTATG+TGG + chr2_1:21650264-21650283 Msa0200950:CDS 35.0%
ACGAATCAAAACAGAACTTC+TGG + chr2_1:21650323-21650342 Msa0200950:CDS 35.0%
TAAGTGCATGCTTGTATTTG+TGG + chr2_1:21650578-21650597 Msa0200950:intron 35.0%
TTTGTTTCATATCTCGCACT+TGG - chr2_1:21650770-21650789 None:intergenic 35.0%
GAAACAAAGAAGTTCCACAT+CGG + chr2_1:21650782-21650801 Msa0200950:intron 35.0%
!! TAGTTTGTTATTAGCCGATG+TGG - chr2_1:21650799-21650818 None:intergenic 35.0%
TGAAGAATACACAATGCAAG+TGG + chr2_1:21650821-21650840 Msa0200950:intron 35.0%
CCTTAAGAAGTTGGGTTAAT+GGG - chr2_1:21650857-21650876 None:intergenic 35.0%
ACCTTAAGAAGTTGGGTTAA+TGG - chr2_1:21650858-21650877 None:intergenic 35.0%
GACCATAATATGCTGAACAA+AGG - chr2_1:21651134-21651153 None:intergenic 35.0%
AGCATATTATGGTCTGTTGT+TGG + chr2_1:21651140-21651159 Msa0200950:intron 35.0%
CCCAAAATACATTGTAAGAG+AGG - chr2_1:21651230-21651249 None:intergenic 35.0%
TATTCCACTACCAGATTTGA+AGG + chr2_1:21651556-21651575 Msa0200950:CDS 35.0%
ACACGTTAAAACCATTTGCT+AGG - chr2_1:21651653-21651672 None:intergenic 35.0%
!! TTTGGCTTGATAAATTGAGC+AGG + chr2_1:21651684-21651703 Msa0200950:intron 35.0%
ATTATGAATACTTGGCTAGC+AGG + chr2_1:21651746-21651765 Msa0200950:CDS 35.0%
AAGTAAAAGGCGATTGAAAC+AGG - chr2_1:21651834-21651853 None:intergenic 35.0%
! TGTTTCAATCGCCTTTTACT+TGG + chr2_1:21651833-21651852 Msa0200950:intron 35.0%
! TTCTTCTTTAAGAGTCCTGA+GGG + chr2_1:21651939-21651958 Msa0200950:CDS 35.0%
! TACAAAAGGACTTGCTTCAA+AGG + chr2_1:21652025-21652044 Msa0200950:CDS 35.0%
!! CTATAGATTTTGATGGCTGT+TGG + chr2_1:21652059-21652078 Msa0200950:intron 35.0%
!!! GATCTGCATAAGTTTTAAGG+TGG - chr2_1:21652176-21652195 None:intergenic 35.0%
! AAATCTGTTCTTGTAATGGG+GGG - chr2_1:21652205-21652224 None:intergenic 35.0%
TGAATCTCTCATGAACTTCA+AGG - chr2_1:21652273-21652292 None:intergenic 35.0%
AGTTCATGAGAGATTCACAA+AGG + chr2_1:21652276-21652295 Msa0200950:CDS 35.0%
! AAAACTAACTTGTGTCATGG+TGG + chr2_1:21652534-21652553 Msa0200950:CDS 35.0%
AGAAAAGGGGAAAGATGGAT+TGG - chr2_1:21647467-21647486 None:intergenic 40.0%
GAATAAGGGAGGAAGAAAAG+GGG - chr2_1:21647480-21647499 None:intergenic 40.0%
GGAATAAGGGAGGAAGAAAA+GGG - chr2_1:21647481-21647500 None:intergenic 40.0%
ACCATCTTCCCCAATTTCTA+GGG + chr2_1:21647517-21647536 Msa0200950:five_prime_UTR 40.0%
AAGGGAAACCCTAGAAATTG+GGG - chr2_1:21647528-21647547 None:intergenic 40.0%
GTTAAGTGGAATGATGTTGC+TGG + chr2_1:21648013-21648032 Msa0200950:CDS 40.0%
GCTCTTACAAATAGTCTCGT+AGG + chr2_1:21648300-21648319 Msa0200950:intron 40.0%
CTATATCGACCCTTGTTCTA+TGG + chr2_1:21648358-21648377 Msa0200950:intron 40.0%
GTTTGTGCTCCATAGAACAA+GGG - chr2_1:21648370-21648389 None:intergenic 40.0%
TGTTTGTGCTCCATAGAACA+AGG - chr2_1:21648371-21648390 None:intergenic 40.0%
! TTTACCGGTGTTAATGTGCA+AGG + chr2_1:21648482-21648501 Msa0200950:intron 40.0%
CTTAAGTGGGACTCTAAGTT+GGG - chr2_1:21648521-21648540 None:intergenic 40.0%
TAATCATGAACCTCGTGTGA+GGG + chr2_1:21648553-21648572 Msa0200950:intron 40.0%
TCAAAAACCATGGCTGAAAG+GGG - chr2_1:21648602-21648621 None:intergenic 40.0%
CTCAAAAACCATGGCTGAAA+GGG - chr2_1:21648603-21648622 None:intergenic 40.0%
! CTTTCAGCCATGGTTTTTGA+GGG + chr2_1:21648602-21648621 Msa0200950:intron 40.0%
!! TTTCAGCCATGGTTTTTGAG+GGG + chr2_1:21648603-21648622 Msa0200950:intron 40.0%
CAGTCACTTCCATTTCGATA+TGG - chr2_1:21648642-21648661 None:intergenic 40.0%
!!! GTTTGTGTCTTTTTTGGAGG+AGG + chr2_1:21648850-21648869 Msa0200950:intron 40.0%
!!! TTGTGTCTTTTTTGGAGGAG+GGG + chr2_1:21648852-21648871 Msa0200950:intron 40.0%
! TTTCAGGTAAAAGACGACCA+TGG + chr2_1:21649337-21649356 Msa0200950:intron 40.0%
!! TTTTTGTTGTATGGACCTCC+TGG + chr2_1:21649366-21649385 Msa0200950:CDS 40.0%
! TATGATTTTCCAGTTCCAGG+AGG - chr2_1:21649384-21649403 None:intergenic 40.0%
!! AGGCTGATTCCACATTTTTC+AGG + chr2_1:21649427-21649446 Msa0200950:CDS 40.0%
TAGGAACTTGCCTGATTACA+AGG + chr2_1:21649513-21649532 Msa0200950:intron 40.0%
TGCATTGCTTGCTCTCTTAA+AGG + chr2_1:21649592-21649611 Msa0200950:CDS 40.0%
CTGCAGGTAAGCAATTTCTT+AGG + chr2_1:21649629-21649648 Msa0200950:intron 40.0%
!! TTTCCATAGGACTTGCTGTT+AGG - chr2_1:21649742-21649761 None:intergenic 40.0%
GATGGGTGAAAGTGAAAAAC+TGG + chr2_1:21650196-21650215 Msa0200950:CDS 40.0%
! TTTCAAGAACTTGGAGGTGT+CGG + chr2_1:21650671-21650690 Msa0200950:intron 40.0%
AGAAGTTGGGTTAATGGGAT+GGG - chr2_1:21650852-21650871 None:intergenic 40.0%
AAGAAGTTGGGTTAATGGGA+TGG - chr2_1:21650853-21650872 None:intergenic 40.0%
CCCATTAACCCAACTTCTTA+AGG + chr2_1:21650854-21650873 Msa0200950:intron 40.0%
! TTTTCTTGTCTTAGCAGGAG+AGG + chr2_1:21650977-21650996 Msa0200950:intron 40.0%
ATTGCCCAATTCCACTACTA+TGG - chr2_1:21651008-21651027 None:intergenic 40.0%
! AGGAAAGCATGGAACTATGA+TGG - chr2_1:21651114-21651133 None:intergenic 40.0%
ATGCTGAACAAAGGAAAGCA+TGG - chr2_1:21651125-21651144 None:intergenic 40.0%
AATATTAGCGATGGCGACTA+CGG - chr2_1:21651184-21651203 None:intergenic 40.0%
TTTGTTCCTAGCATTGCTGT+AGG + chr2_1:21651277-21651296 Msa0200950:intron 40.0%
CTGCAAGAACAAGAACTTTC+TGG - chr2_1:21651395-21651414 None:intergenic 40.0%
! CTTACCTGGTCTAAAGCATA+AGG - chr2_1:21651429-21651448 None:intergenic 40.0%
TTGCCTTAAACATGTGTTGG+CGG - chr2_1:21651583-21651602 None:intergenic 40.0%
! CCAACACATGTTTAAGGCAA+GGG + chr2_1:21651583-21651602 Msa0200950:intron 40.0%
TAAATTGAGCAGGTGCATCT+TGG + chr2_1:21651694-21651713 Msa0200950:intron 40.0%
! ACATAGCATCTTGGGTTTTG+CGG - chr2_1:21651920-21651939 None:intergenic 40.0%
! GTTCTTCTTTAAGAGTCCTG+AGG + chr2_1:21651938-21651957 Msa0200950:CDS 40.0%
CGCAGTTCAAACTACAATGA+CGG + chr2_1:21651995-21652014 Msa0200950:CDS 40.0%
!! ATGACGGATCTTGCTACAAA+AGG + chr2_1:21652011-21652030 Msa0200950:CDS 40.0%
!! GGTTGTGATATTTTTCGACG+AGG + chr2_1:21652110-21652129 Msa0200950:intron 40.0%
AAAAGGTTCTTGCTAGGCAA+AGG + chr2_1:21652227-21652246 Msa0200950:CDS 40.0%
!!! AGGTCACTTTTGCTTACTGT+AGG - chr2_1:21652253-21652272 None:intergenic 40.0%
GAGAGATTCACAAAGGAGTT+TGG + chr2_1:21652283-21652302 Msa0200950:CDS 40.0%
ACAAAGGAGTTTGGAGAAGA+AGG + chr2_1:21652292-21652311 Msa0200950:CDS 40.0%
TAAATCAACCTCCGCACAAT+CGG - chr2_1:21652451-21652470 None:intergenic 40.0%
! CGGAGGTTGATTTATTACGA+TGG + chr2_1:21652457-21652476 Msa0200950:CDS 40.0%
GAGGAAGAAAAGGGGAAAGA+TGG - chr2_1:21647472-21647491 None:intergenic 45.0%
GGGAATAAGGGAGGAAGAAA+AGG - chr2_1:21647482-21647501 None:intergenic 45.0%
GGTGATCTGATCGGGAATAA+GGG - chr2_1:21647494-21647513 None:intergenic 45.0%
TGGTGATCTGATCGGGAATA+AGG - chr2_1:21647495-21647514 None:intergenic 45.0%
CTAGAAATTGGGGAAGATGG+TGG - chr2_1:21647518-21647537 None:intergenic 45.0%
CACCATCTTCCCCAATTTCT+AGG + chr2_1:21647516-21647535 Msa0200950:five_prime_UTR 45.0%
ACCCTAGAAATTGGGGAAGA+TGG - chr2_1:21647521-21647540 None:intergenic 45.0%
CTCAGCACGACGTAAATACT+CGG - chr2_1:21647801-21647820 None:intergenic 45.0%
GGGAAAAGCCGAATGTTAAG+TGG + chr2_1:21647999-21648018 Msa0200950:CDS 45.0%
CCTTAAGTGGGACTCTAAGT+TGG - chr2_1:21648522-21648541 None:intergenic 45.0%
CCAACTTAGAGTCCCACTTA+AGG + chr2_1:21648519-21648538 Msa0200950:intron 45.0%
CTCACACGAGGTTCATGATT+AGG - chr2_1:21648554-21648573 None:intergenic 45.0%
CTAATCATGAACCTCGTGTG+AGG + chr2_1:21648552-21648571 Msa0200950:intron 45.0%
CCTATATAAACCCTCACACG+AGG - chr2_1:21648566-21648585 None:intergenic 45.0%
CCTCGTGTGAGGGTTTATAT+AGG + chr2_1:21648563-21648582 Msa0200950:intron 45.0%
CCTCAAAAACCATGGCTGAA+AGG - chr2_1:21648604-21648623 None:intergenic 45.0%
! CCTTTCAGCCATGGTTTTTG+AGG + chr2_1:21648601-21648620 Msa0200950:intron 45.0%
!! TTCAGCCATGGTTTTTGAGG+GGG + chr2_1:21648604-21648623 Msa0200950:intron 45.0%
TAACTCCCCCTCAAAAACCA+TGG - chr2_1:21648612-21648631 None:intergenic 45.0%
TTTGGAGGAGGGGATAAGAT+TGG + chr2_1:21648862-21648881 Msa0200950:intron 45.0%
TTTGTGCGGAGAACTCTACA+AGG + chr2_1:21649116-21649135 Msa0200950:intron 45.0%
! GGTCGTCTTTTACCTGAAAG+AGG - chr2_1:21649336-21649355 None:intergenic 45.0%
TAGGACTTTGCCTAGCCATT+TGG + chr2_1:21649648-21649667 Msa0200950:intron 45.0%
!! TTTGGCATTTGGTGCAGTTG+CGG - chr2_1:21649698-21649717 None:intergenic 45.0%
AGTCCTAACAGCAAGTCCTA+TGG + chr2_1:21649736-21649755 Msa0200950:intron 45.0%
! GAGATTGAGCTGTTTCATGC+TGG + chr2_1:21651028-21651047 Msa0200950:intron 45.0%
TTGGAACCTACAGCAATGCT+AGG - chr2_1:21651286-21651305 None:intergenic 45.0%
CCTACACCCTACAATATGAG+TGG - chr2_1:21651363-21651382 None:intergenic 45.0%
CCACTCATATTGTAGGGTGT+AGG + chr2_1:21651360-21651379 Msa0200950:intron 45.0%
! CACACCTTATGCTTTAGACC+AGG + chr2_1:21651422-21651441 Msa0200950:CDS 45.0%
!! TAGCTTCCTGCTGACTCTAT+GGG - chr2_1:21651477-21651496 None:intergenic 45.0%
!! ATAGCTTCCTGCTGACTCTA+TGG - chr2_1:21651478-21651497 None:intergenic 45.0%
! TGCCTTAAACATGTGTTGGC+GGG - chr2_1:21651582-21651601 None:intergenic 45.0%
! GCCAACACATGTTTAAGGCA+AGG + chr2_1:21651582-21651601 Msa0200950:intron 45.0%
CCCTTGCCTTAAACATGTGT+TGG - chr2_1:21651586-21651605 None:intergenic 45.0%
! TTAAGAGTCCTGAGGGTATG+TGG + chr2_1:21651946-21651965 Msa0200950:CDS 45.0%
ATGTGAAGTTCCCGATTGTG+CGG + chr2_1:21652437-21652456 Msa0200950:CDS 45.0%
AAATCAACCTCCGCACAATC+GGG - chr2_1:21652450-21652469 None:intergenic 45.0%
GTCATGGTGGTTGCTTATGT+TGG + chr2_1:21652547-21652566 Msa0200950:CDS 45.0%
GATCTGATCGGGAATAAGGG+AGG - chr2_1:21647491-21647510 None:intergenic 50.0%
!! ATGGTGGTGGTGATCTGATC+GGG - chr2_1:21647502-21647521 None:intergenic 50.0%
!! GATGGTGGTGGTGATCTGAT+CGG - chr2_1:21647503-21647522 None:intergenic 50.0%
! GAAATTGGGGAAGATGGTGG+TGG - chr2_1:21647515-21647534 None:intergenic 50.0%
TCCGGCATTGTCTTCGTGTA+CGG - chr2_1:21647669-21647688 None:intergenic 50.0%
CGAGTATTTACGTCGTGCTG+AGG + chr2_1:21647799-21647818 Msa0200950:CDS 50.0%
ATCAGGGCTGTGCTTGATGA+CGG + chr2_1:21647824-21647843 Msa0200950:CDS 50.0%
CCATCCTTCCCCTTACTCTT+CGG - chr2_1:21647896-21647915 None:intergenic 50.0%
AAGAGTAAGGGGAAGGATGG+TGG + chr2_1:21647896-21647915 Msa0200950:CDS 50.0%
GTGGAATGATGTTGCTGGGT+TGG + chr2_1:21648018-21648037 Msa0200950:CDS 50.0%
!! TGGGTTGGAGAGTGCTAAAC+AGG + chr2_1:21648033-21648052 Msa0200950:CDS 50.0%
GAGTGCTAAACAGGCTTTGC+AGG + chr2_1:21648042-21648061 Msa0200950:CDS 50.0%
! ACCGGTGTTAATGTGCAAGG+AGG + chr2_1:21648485-21648504 Msa0200950:intron 50.0%
CCCTCCTTGCACATTAACAC+CGG - chr2_1:21648489-21648508 None:intergenic 50.0%
! CCGGTGTTAATGTGCAAGGA+GGG + chr2_1:21648486-21648505 Msa0200950:intron 50.0%
AAAACCATGGCTGAAAGGGG+AGG - chr2_1:21648599-21648618 None:intergenic 50.0%
ACCATGAAGTGGCTGTTCTC+TGG + chr2_1:21649156-21649175 Msa0200950:intron 50.0%
TCCAGAGAACAGCCACTTCA+TGG - chr2_1:21649160-21649179 None:intergenic 50.0%
! TTTTACCTGAAAGAGGCCGC+AGG - chr2_1:21649329-21649348 None:intergenic 50.0%
TTGTATGGACCTCCTGGAAC+TGG + chr2_1:21649372-21649391 Msa0200950:CDS 50.0%
AGAACTTCTGGTGCAGATGC+AGG + chr2_1:21650335-21650354 Msa0200950:CDS 50.0%
CCAATTCCACTACTATGGCC+CGG - chr2_1:21651003-21651022 None:intergenic 50.0%
! CGGGCCATAGTAGTGGAATT+GGG + chr2_1:21651001-21651020 Msa0200950:intron 50.0%
TATCACCCCATAGAGTCAGC+AGG + chr2_1:21651468-21651487 Msa0200950:intron 50.0%
!! AGCTTCCTGCTGACTCTATG+GGG - chr2_1:21651476-21651495 None:intergenic 50.0%
ATACTTGGCTAGCAGGACAG+AGG + chr2_1:21651753-21651772 Msa0200950:CDS 50.0%
TACTTGGCTAGCAGGACAGA+GGG + chr2_1:21651754-21651773 Msa0200950:CDS 50.0%
!! CCTGTTGCTTTGGTCCACAT+GGG - chr2_1:21651974-21651993 None:intergenic 50.0%
CCATGTGGACCAAAGCAACA+GGG + chr2_1:21651972-21651991 Msa0200950:CDS 50.0%
! TTCTTGTAATGGGGGGTGGA+AGG - chr2_1:21652198-21652217 None:intergenic 50.0%
! TCTGTTCTTGTAATGGGGGG+TGG - chr2_1:21652202-21652221 None:intergenic 50.0%
GCCGTACACGAAGACAATGC+CGG + chr2_1:21647665-21647684 Msa0200950:CDS 55.0%
TACGTCGTGCTGAGGAGATC+AGG + chr2_1:21647807-21647826 Msa0200950:CDS 55.0%
ACGTCGTGCTGAGGAGATCA+GGG + chr2_1:21647808-21647827 Msa0200950:CDS 55.0%
AGCTTCTAATGGCGATGCCG+CGG + chr2_1:21647859-21647878 Msa0200950:CDS 55.0%
TGCTACGAGGCCGAAGAGTA+AGG + chr2_1:21647883-21647902 Msa0200950:CDS 55.0%
GCTACGAGGCCGAAGAGTAA+GGG + chr2_1:21647884-21647903 Msa0200950:CDS 55.0%
CTACGAGGCCGAAGAGTAAG+GGG + chr2_1:21647885-21647904 Msa0200950:CDS 55.0%
CCGAAGAGTAAGGGGAAGGA+TGG + chr2_1:21647893-21647912 Msa0200950:CDS 55.0%
! AGTAAGGGGAAGGATGGTGG+TGG + chr2_1:21647899-21647918 Msa0200950:CDS 55.0%
! GTAAGGGGAAGGATGGTGGT+GGG + chr2_1:21647900-21647919 Msa0200950:CDS 55.0%
! TAAGGGGAAGGATGGTGGTG+GGG + chr2_1:21647901-21647920 Msa0200950:CDS 55.0%
AGGTGGTGAAGGAGAGGATC+CGG + chr2_1:21647934-21647953 Msa0200950:CDS 55.0%
CAATCCTCCCCTTTCAGCCA+TGG + chr2_1:21648592-21648611 Msa0200950:intron 55.0%
AGCCAAGGCAGTTGCAACTG+AGG + chr2_1:21649407-21649426 Msa0200950:CDS 55.0%
AGCCTCAGTTGCAACTGCCT+TGG - chr2_1:21649412-21649431 None:intergenic 55.0%
TTCTCCACGCTGGCCACATA+GGG - chr2_1:21650280-21650299 None:intergenic 55.0%
TCTCATTGCCTTCTCCACGC+TGG - chr2_1:21650290-21650309 None:intergenic 55.0%
CTTGTCTTAGCAGGAGAGGC+CGG + chr2_1:21650981-21651000 Msa0200950:intron 55.0%
TTGTCTTAGCAGGAGAGGCC+GGG + chr2_1:21650982-21651001 Msa0200950:intron 55.0%
! CCGGGCCATAGTAGTGGAAT+TGG + chr2_1:21651000-21651019 Msa0200950:intron 55.0%
CGGGCCTTCAAATCTGGTAG+TGG - chr2_1:21651563-21651582 None:intergenic 55.0%
! TGTTGGCGGGCCTTCAAATC+TGG - chr2_1:21651569-21651588 None:intergenic 55.0%
GGCCCGCCAACACATGTTTA+AGG + chr2_1:21651577-21651596 Msa0200950:CDS 55.0%
ACTTGGCTAGCAGGACAGAG+GGG + chr2_1:21651755-21651774 Msa0200950:CDS 55.0%
! AGCAGGACAGAGGGGTTTTC+TGG + chr2_1:21651763-21651782 Msa0200950:CDS 55.0%
! GCATCTTGGGTTTTGCGGAC+AGG - chr2_1:21651915-21651934 None:intergenic 55.0%
CATGGGATCCACATACCCTC+AGG - chr2_1:21651957-21651976 None:intergenic 55.0%
! GAGGGTATGTGGATCCCATG+TGG + chr2_1:21651957-21651976 Msa0200950:CDS 55.0%
CCCATGTGGACCAAAGCAAC+AGG + chr2_1:21651971-21651990 Msa0200950:CDS 55.0%
!! CCCTGTTGCTTTGGTCCACA+TGG - chr2_1:21651975-21651994 None:intergenic 55.0%
! TGAACTGCGCCCTGTTGCTT+TGG - chr2_1:21651984-21652003 None:intergenic 55.0%
TGAAGTTCCCGATTGTGCGG+AGG + chr2_1:21652440-21652459 Msa0200950:CDS 55.0%
!! AGGGCTGTGCTTGATGACGG+TGG + chr2_1:21647827-21647846 Msa0200950:CDS 60.0%
!! GGGCTGTGCTTGATGACGGT+GGG + chr2_1:21647828-21647847 Msa0200950:CDS 60.0%
!! TGCTTGATGACGGTGGGCCA+GGG + chr2_1:21647834-21647853 Msa0200950:CDS 60.0%
TCGCCATTAGAAGCTGGCCC+TGG - chr2_1:21647854-21647873 None:intergenic 60.0%
GCGGCATCGCCATTAGAAGC+TGG - chr2_1:21647860-21647879 None:intergenic 60.0%
GAGGCCGAAGAGTAAGGGGA+AGG + chr2_1:21647889-21647908 Msa0200950:CDS 60.0%
TGGTGGAGGTGGTGAAGGAG+AGG + chr2_1:21647928-21647947 Msa0200950:CDS 60.0%
TGAAGGAGAGGATCCGGAGC+AGG + chr2_1:21647940-21647959 Msa0200950:CDS 60.0%
! GCTCTAAGCTTCGCCTGCTC+CGG - chr2_1:21647956-21647975 None:intergenic 60.0%
GGAGCAGGCGAAGCTTAGAG+CGG + chr2_1:21647955-21647974 Msa0200950:CDS 60.0%
GAGCAGGCGAAGCTTAGAGC+GGG + chr2_1:21647956-21647975 Msa0200950:CDS 60.0%
AGCAGGCGAAGCTTAGAGCG+GGG + chr2_1:21647957-21647976 Msa0200950:CDS 60.0%
TGCTTCCTGCGGCCTCTTTC+AGG + chr2_1:21649321-21649340 Msa0200950:intron 60.0%
GATTCCCTATGTGGCCAGCG+TGG + chr2_1:21650273-21650292 Msa0200950:CDS 60.0%
CTTCTCCACGCTGGCCACAT+AGG - chr2_1:21650281-21650300 None:intergenic 60.0%
CTATGTGGCCAGCGTGGAGA+AGG + chr2_1:21650279-21650298 Msa0200950:CDS 60.0%
!! GTGCTTGATGACGGTGGGCC+AGG + chr2_1:21647833-21647852 Msa0200950:CDS 65.0%
GGGCCAGGGCCAGCTTCTAA+TGG + chr2_1:21647848-21647867 Msa0200950:CDS 65.0%
CTTCGGCCTCGTAGCAACCG+CGG - chr2_1:21647879-21647898 None:intergenic 65.0%
!! GGGAAGGATGGTGGTGGGGA+GGG + chr2_1:21647905-21647924 Msa0200950:CDS 65.0%
!! AAGGATGGTGGTGGGGAGGG+TGG + chr2_1:21647908-21647927 Msa0200950:CDS 65.0%
!! GAGGGTGGTGGAGGTGGTGA+AGG + chr2_1:21647923-21647942 Msa0200950:CDS 65.0%
GAGAGGCCGGGCCATAGTAG+TGG + chr2_1:21650994-21651013 Msa0200950:intron 65.0%
GCGATGCCGCGGTTGCTACG+AGG + chr2_1:21647870-21647889 Msa0200950:CDS 70.0%
!! GGGGAAGGATGGTGGTGGGG+AGG + chr2_1:21647904-21647923 Msa0200950:CDS 70.0%
!! GATGGTGGTGGGGAGGGTGG+TGG + chr2_1:21647911-21647930 Msa0200950:CDS 70.0%
!! GGTGGTGGGGAGGGTGGTGG+AGG + chr2_1:21647914-21647933 Msa0200950:CDS 75.0%
!! GGTGGGGAGGGTGGTGGAGG+TGG + chr2_1:21647917-21647936 Msa0200950:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 21647379 21652708 21647379 ID=Msa0200950;Name=Msa0200950
chr2_1 mRNA 21647379 21652708 21647379 ID=Msa0200950-mRNA-1;Parent=Msa0200950;Name=Msa0200950-mRNA-1;_AED=0.18;_eAED=0.18;_QI=241|0.66|0.6|0.9|1|1|10|0|568
chr2_1 exon 21647379 21648106 21647379 ID=Msa0200950-mRNA-1:exon:8712;Parent=Msa0200950-mRNA-1
chr2_1 exon 21649343 21649448 21649343 ID=Msa0200950-mRNA-1:exon:8713;Parent=Msa0200950-mRNA-1
chr2_1 exon 21649535 21649634 21649535 ID=Msa0200950-mRNA-1:exon:8714;Parent=Msa0200950-mRNA-1
chr2_1 exon 21650180 21650356 21650180 ID=Msa0200950-mRNA-1:exon:8715;Parent=Msa0200950-mRNA-1
chr2_1 exon 21651375 21651443 21651375 ID=Msa0200950-mRNA-1:exon:8716;Parent=Msa0200950-mRNA-1
chr2_1 exon 21651524 21651598 21651524 ID=Msa0200950-mRNA-1:exon:8717;Parent=Msa0200950-mRNA-1
chr2_1 exon 21651706 21651804 21651706 ID=Msa0200950-mRNA-1:exon:8718;Parent=Msa0200950-mRNA-1
chr2_1 exon 21651891 21652046 21651891 ID=Msa0200950-mRNA-1:exon:8719;Parent=Msa0200950-mRNA-1
chr2_1 exon 21652193 21652313 21652193 ID=Msa0200950-mRNA-1:exon:8720;Parent=Msa0200950-mRNA-1
chr2_1 exon 21652392 21652708 21652392 ID=Msa0200950-mRNA-1:exon:8721;Parent=Msa0200950-mRNA-1
chr2_1 five_prime_UTR 21647379 21647619 21647379 ID=Msa0200950-mRNA-1:five_prime_utr;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21647620 21648106 21647620 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21649343 21649448 21649343 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21649535 21649634 21649535 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21650180 21650356 21650180 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21651375 21651443 21651375 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21651524 21651598 21651524 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21651706 21651804 21651706 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21651891 21652046 21651891 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21652193 21652313 21652193 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
chr2_1 CDS 21652392 21652708 21652392 ID=Msa0200950-mRNA-1:cds;Parent=Msa0200950-mRNA-1
Gene Sequence

>Msa0200950

ATGTATAGCAATTTCAAGGAACAAGCAATAGAGTACGTGAAACAAGCCGTACACGAAGACAATGCCGGAAACTATTCAAAAGCGTTTCCTTTATACATGAACGCTTTAGAGTATTTCAAAACCCATTTAAAGTACGAAAAAAACCCTAAAATCAGAGAAGCAATTACGCAGAAATTCACCGAGTATTTACGTCGTGCTGAGGAGATCAGGGCTGTGCTTGATGACGGTGGGCCAGGGCCAGCTTCTAATGGCGATGCCGCGGTTGCTACGAGGCCGAAGAGTAAGGGGAAGGATGGTGGTGGGGAGGGTGGTGGAGGTGGTGAAGGAGAGGATCCGGAGCAGGCGAAGCTTAGAGCGGGGTTGAATTCTGCGATTATTAGGGAAAAGCCGAATGTTAAGTGGAATGATGTTGCTGGGTTGGAGAGTGCTAAACAGGCTTTGCAGGAAGCTGTTATTTTACCTGTCAAGTTTCCTCAATTTTTTACTGGTAAAAGACGACCATGGAGAGCATTTTTGTTGTATGGACCTCCTGGAACTGGAAAATCATATTTAGCCAAGGCAGTTGCAACTGAGGCTGATTCCACATTTTTCAGGATTATCCTTGGAATGAAATCATATTCTCAAGTGGAACAATATATTTTCTCAATTTATGCATTGCTTGCTCTCTTAAAGGCATTAAAATTTGAACTGCAGATCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAACTGGTTTCAAACCTTTTTCTCAAATGGCTCAAAGTTTATTATATTTGTTGATGAAATAGATTCCCTATGTGGCCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGAATCAAAACAGAACTTCTGGTGCAGATGCAGGGTGTAGGAAACAATGACCAGAAAGTTCTTGTTCTTGCAGCAACAAACACACCTTATGCTTTAGACCAGGCAATAAGGCGTCGTTTTGATAAGCGTATTTATATTCCACTACCAGATTTGAAGGCCCGCCAACACATGTTTAAGGTGCATCTTGGAGATACTCCTCATAATTTAACTGAAAAGGATTATGAATACTTGGCTAGCAGGACAGAGGGGTTTTCTGGTTCAGATATATCTGTTTGCGTGAAGGATGTTCTATTTGAACCTGTCCGCAAAACCCAAGATGCTATGTTCTTCTTTAAGAGTCCTGAGGGTATGTGGATCCCATGTGGACCAAAGCAACAGGGCGCAGTTCAAACTACAATGACGGATCTTGCTACAAAAGGACTTGCTTCAAAGATCCTTCCACCCCCCATTACAAGAACAGATTTTGAAAAGGTTCTTGCTAGGCAAAGGCCTACAGTAAGCAAAAGTGACCTTGAAGTTCATGAGAGATTCACAAAGGAGTTTGGAGAAGAAGTTATTGAATCAAGTGAAATGCATCCTTTTTATGTTATTTTCGGGGATGTGAAGTTCCCGATTGTGCGGAGGTTGATTTATTACGATGGATACTCTCATTTTGTTTCTCCTAAATTGTGTATATTTGAATCTGAAATGATTAGAAAACTAACTTGTGTCATGGTGGTTGCTTATGTTGGTATAGTGCTTGTGTTTTTCAGTTTTCAAAACGATGTTTCATCTTGTAAAAAAAGATGGATGATTCACGATATATTCAGTAGCTATGCTGCACTGAACTATGATATAAGACAAACTGAATTCATTAAAGATGCTGGTTAG
Protein sequence

>Msa0200950

MYSNFKEQAIEYVKQAVHEDNAGNYSKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKSKGKDGGGEGGGGGEGEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFRIILGMKSYSQVEQYIFSIYALLALLKALKFELQILFQSGWVKVKNWFQTFFSNGSKFIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDYEYLASRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKSPEGMWIPCGPKQQGAVQTTMTDLATKGLASKILPPPITRTDFEKVLARQRPTVSKSDLEVHERFTKEFGEEVIESSEMHPFYVIFGDVKFPIVRRLIYYDGYSHFVSPKLCIFESEMIRKLTCVMVVAYVGIVLVFFSFQNDVSSCKKRWMIHDIFSSYAALNYDIRQTEFIKDAG*