AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027540 MtrunA17_Chr1g0183791 94.070 371 22 0 1 371 1 371 0.0 705
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027540 AT1G06190.1 36.806 432 171 14 1 368 3 396 8.27e-47 164
Msa0027540 AT1G06190.5 36.597 429 168 15 4 368 11 399 1.73e-45 161
Msa0027540 AT1G06190.2 42.960 277 102 10 1 254 3 246 1.43e-37 137
Msa0027540 AT1G06190.3 36.223 323 118 8 105 368 1 294 1.98e-31 121
Msa0027540 AT1G06190.4 36.223 323 118 8 105 368 1 294 1.98e-31 121
Msa0027540 AT2G31150.1 40.526 190 78 8 69 253 28 187 9.83e-18 83.2

Find 115 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATCTCCCTTCTTCATTT+TGG 0.199446 1_1:-51904740 None:intergenic
ATTCATTCTCATGTCAAAAT+TGG 0.207354 1_1:+51903806 Msa0027540:CDS
AGGAGATTGTTGAATTATTT+AGG 0.215094 1_1:+51904065 Msa0027540:CDS
ATCCACACCCTCATTATTAT+AGG 0.236533 1_1:-51904626 None:intergenic
CACTGAAGATGTCTGAATTA+AGG 0.272149 1_1:+51904683 Msa0027540:CDS
CAACAGAGTGTTTCTTCAAT+AGG 0.293426 1_1:-51904195 None:intergenic
TTCCCGTGTTCACGTGGTTT+TGG 0.304722 1_1:+51903737 Msa0027540:CDS
GAATCATCATCAGAAAATTC+AGG 0.322009 1_1:-51904586 None:intergenic
CACGGGAAACACTTGTCTTC+TGG 0.338216 1_1:-51903722 None:intergenic
GTGGAACAGGAGACTTTCTT+TGG 0.339277 1_1:-51904393 None:intergenic
ATCATTATCCTTATGTGCTT+CGG 0.353933 1_1:+51905106 Msa0027540:three_prime_UTR
TGCTTCGGTTGTCTCTCTTT+TGG 0.356583 1_1:+51905121 Msa0027540:three_prime_UTR
CTTGCAACTGGTCAGAGTTA+AGG 0.357514 1_1:-51904258 None:intergenic
GGTCATCAAGAGGCAGAAAT+AGG 0.364129 1_1:+51903915 Msa0027540:CDS
CCTGAATTATGCGATACTAA+TGG 0.364548 1_1:-51904004 None:intergenic
CTCATTATTATAGGTTTGTT+CGG 0.368039 1_1:-51904617 None:intergenic
AGAAGCCAACATTGCTTCTT+CGG 0.370636 1_1:+51904351 Msa0027540:CDS
ATTGGTTACTTTCTTGCAAC+TGG 0.376988 1_1:-51904270 None:intergenic
GCTTCTCGAGACTCGCCCTT+TGG 0.377737 1_1:-51904334 None:intergenic
TCATTATCTTCAGTACCTAT+TGG 0.378379 1_1:-51904466 None:intergenic
CAAGAAAGTAACCAATATAA+TGG 0.383785 1_1:+51904277 Msa0027540:CDS
ATCTCCTTCTCTCTGGGGCC+AGG 0.383899 1_1:-51904049 None:intergenic
CCATTAGTATCGCATAATTC+AGG 0.386197 1_1:+51904004 Msa0027540:CDS
TGAAGATAATGAGAACATTC+AGG 0.393717 1_1:+51904477 Msa0027540:CDS
TTATAGAACTTACGAGATAC+TGG 0.397294 1_1:-51905172 None:intergenic
TCTCCTTCTCTCTGGGGCCA+GGG 0.398569 1_1:-51904048 None:intergenic
ACTGAAGATGTCTGAATTAA+GGG 0.399378 1_1:+51904684 Msa0027540:CDS
TTCAACAATCTCCTTCTCTC+TGG 0.400512 1_1:-51904056 None:intergenic
TCAATGTCAGACACAAGTTT+AGG 0.403640 1_1:-51904535 None:intergenic
AAAATTGGAGGACTAAAGTA+TGG 0.407218 1_1:+51903821 Msa0027540:CDS
ATTTCTCAAGGCAAAACAAT+AGG 0.425700 1_1:+51903888 Msa0027540:CDS
TTGCTTCTTCGGCTCGGCCT+CGG 0.432797 1_1:+51904362 Msa0027540:CDS
TACACTCGAACCCAGGTGAT+TGG 0.433213 1_1:-51904934 None:intergenic
TCTGGGGCCAGGGGATGAAG+TGG 0.433553 1_1:-51904038 None:intergenic
GAGAACTGATTCTGAGTAAA+CGG 0.437225 1_1:+51904778 Msa0027540:exon
AGAGACAACCGAAGCACATA+AGG 0.440318 1_1:-51905114 None:intergenic
TCACCGTGTCTTTGCCTTGG+TGG 0.442141 1_1:+51904974 Msa0027540:three_prime_UTR
AGTCTCCTGTTCCACGTGTT+AGG 0.449557 1_1:+51904401 Msa0027540:CDS
CTCCTTCTCTCTGGGGCCAG+GGG 0.453590 1_1:-51904047 None:intergenic
GAGATACTAACCAACGTTGT+TGG 0.460708 1_1:-51902070 None:intergenic
GATACTAATGCAATACCAAT+AGG 0.463250 1_1:+51904451 Msa0027540:CDS
CCAGCCTCTCTCTAATAACT+TGG 0.465102 1_1:+51904426 Msa0027540:CDS
CATTCTCATGTCAAAATTGG+AGG 0.466208 1_1:+51903809 Msa0027540:CDS
TGGTACCTAACACGTGGAAC+AGG 0.468633 1_1:-51904406 None:intergenic
GCATAATTCAGGAAAATTCC+AGG 0.470969 1_1:+51904015 Msa0027540:CDS
AGTAATAATCTTATCAGGCT+AGG 0.472290 1_1:+51905073 Msa0027540:three_prime_UTR
CCAAGTTATTAGAGAGAGGC+TGG 0.475081 1_1:-51904426 None:intergenic
GGCAGAAATAGGAACGATGA+TGG 0.476321 1_1:+51903926 Msa0027540:CDS
CTTGTAGTAATAATCTTATC+AGG 0.477197 1_1:+51905068 Msa0027540:three_prime_UTR
GTATATTCATGCACTTCTCT+AGG 0.477464 1_1:+51903773 Msa0027540:CDS
GAGCAAGGAAAGAGAAGTAA+TGG 0.479561 1_1:+51904217 Msa0027540:CDS
TCAGACACAAGTTTAGGTTC+TGG 0.480757 1_1:-51904529 None:intergenic
ACATTGTTGGTTTATTGTGT+TGG 0.484131 1_1:-51902023 None:intergenic
TCAACAATCTCCTTCTCTCT+GGG 0.484672 1_1:-51904055 None:intergenic
TTCTGATTCAGGTGCTCCAA+AGG 0.490898 1_1:+51904318 Msa0027540:CDS
GGCCAGGGGATGAAGTGGCC+TGG 0.491170 1_1:-51904033 None:intergenic
CAAAGTCTCGTGGCGTGAAA+GGG 0.496245 1_1:+51904713 Msa0027540:CDS
GCAAAGTCTCGTGGCGTGAA+AGG 0.497859 1_1:+51904712 Msa0027540:CDS
TGAACCGTTTGCGACATTGT+TGG 0.505459 1_1:-51902036 None:intergenic
CACCTGGGTTCGAGTGTAGT+TGG 0.509604 1_1:+51904939 Msa0027540:three_prime_UTR
CGAACAAACCTATAATAATG+AGG 0.509607 1_1:+51904618 Msa0027540:CDS
TTCAAGCTCGGTTGCGTGAG+AGG 0.514959 1_1:+51904092 Msa0027540:CDS
TTCCAGGCCACTTCATCCCC+TGG 0.519556 1_1:+51904031 Msa0027540:CDS
AATCATCATCAGAAAATTCA+GGG 0.519668 1_1:-51904585 None:intergenic
AGGGTTCTCCAAAATGAAGA+AGG 0.519774 1_1:+51904732 Msa0027540:CDS
GTAATAATCTTATCAGGCTA+GGG 0.520471 1_1:+51905074 Msa0027540:three_prime_UTR
TAATCACCGTGTCTTTGCCT+TGG 0.522201 1_1:+51904971 Msa0027540:three_prime_UTR
AACCTATAATAATGAGGGTG+TGG 0.526342 1_1:+51904624 Msa0027540:CDS
AGAAGTAATGGAGAGGACGA+TGG 0.534478 1_1:+51904229 Msa0027540:CDS
TCTGATTCAGGTGCTCCAAA+GGG 0.540137 1_1:+51904319 Msa0027540:CDS
TAAACCAACAATGTCGCAAA+CGG 0.544528 1_1:+51902032 Msa0027540:exon
ATCCCCTGGCCCCAGAGAGA+AGG 0.545660 1_1:+51904045 Msa0027540:CDS
TCAAGGCAAAACAATAGGCA+TGG 0.548267 1_1:+51903893 Msa0027540:CDS
CCGAGCCGAAGAAGCAATGT+TGG 0.549322 1_1:-51904356 None:intergenic
GAAGCACATAAGGATAATGA+TGG 0.551015 1_1:-51905104 None:intergenic
AGTGTTTCTTCAATAGGTTG+AGG 0.554093 1_1:-51904189 None:intergenic
CTTCCAAAACCACGTGAACA+CGG 0.555093 1_1:-51903740 None:intergenic
CCAACATTGCTTCTTCGGCT+CGG 0.556816 1_1:+51904356 Msa0027540:CDS
TATTTAGGAAAGTTCAAGCT+CGG 0.557831 1_1:+51904080 Msa0027540:CDS
GCATGTAGTGGTTCAAAATG+AGG 0.559809 1_1:+51904651 Msa0027540:CDS
TTTGCTCTTTAACATGCCCT+CGG 0.561148 1_1:-51904150 None:intergenic
AAAGTAACCAATATAATGGA+AGG 0.561546 1_1:+51904281 Msa0027540:CDS
TTTCTTCAATAGGTTGAGGA+GGG 0.570516 1_1:-51904185 None:intergenic
AATATTCCGATCCAATCACC+TGG 0.571803 1_1:+51904923 Msa0027540:three_prime_UTR
GTTTCTTCAATAGGTTGAGG+AGG 0.572179 1_1:-51904186 None:intergenic
TTCCAAAACCACGTGAACAC+GGG 0.574997 1_1:-51903739 None:intergenic
GACCAACTACACTCGAACCC+AGG 0.586299 1_1:-51904941 None:intergenic
CTCATCGTCGCCAACAACGT+TGG 0.587414 1_1:+51902060 Msa0027540:CDS
GCAGAAATAGGAACGATGAT+GGG 0.587866 1_1:+51903927 Msa0027540:CDS
AAACAATTTACTCCATAAGC+CGG 0.590061 1_1:-51905148 None:intergenic
AAGGAAAAGTAATACTAGAA+CGG 0.591425 1_1:+51904807 Msa0027540:three_prime_UTR
AAGAAACACTCTGTTGAGCA+AGG 0.591435 1_1:+51904202 Msa0027540:CDS
AAGTGTTTCCCGTGTTCACG+TGG 0.592780 1_1:+51903731 Msa0027540:CDS
GAACAAACCTATAATAATGA+GGG 0.596913 1_1:+51904619 Msa0027540:CDS
AATGAAGAAGGGAGATCTCG+TGG 0.596961 1_1:+51904744 Msa0027540:CDS
AGAAAGTTGAAGCACGCCGA+GGG 0.601504 1_1:+51904134 Msa0027540:CDS
TCTGAGTAAACGGTACGAGA+AGG 0.608360 1_1:+51904788 Msa0027540:three_prime_UTR
CAAGGCAAAACAATAGGCAT+GGG 0.615186 1_1:+51903894 Msa0027540:CDS
GGGTTCTCCAAAATGAAGAA+GGG 0.625338 1_1:+51904733 Msa0027540:CDS
AAACATCTAGTTAAAAGCAG+AGG 0.628546 1_1:-51904863 None:intergenic
TCGAACCCAGGTGATTGGAT+CGG 0.631164 1_1:-51904929 None:intergenic
TCAGCCAAGTTATTAGAGAG+AGG 0.631266 1_1:-51904430 None:intergenic
AATAGGCATGGGTCATCAAG+AGG 0.632902 1_1:+51903905 Msa0027540:CDS
TGACATTGATCTTGATACAA+AGG 0.632946 1_1:+51904549 Msa0027540:CDS
GGAGGAACTCAGATTTCTCA+AGG 0.637151 1_1:+51903876 Msa0027540:CDS
AGGACTAAAGTATGGTTCAA+CGG 0.640774 1_1:+51903829 Msa0027540:CDS
AGGGCACTTGCAAAGTCTCG+TGG 0.643518 1_1:+51904703 Msa0027540:CDS
TTTCTTTGGAAAACTGACCG+AGG 0.646782 1_1:-51904379 None:intergenic
AAGAAAGTTGAAGCACGCCG+AGG 0.654479 1_1:+51904133 Msa0027540:CDS
AGGAAAGAGAAGTAATGGAG+AGG 0.667328 1_1:+51904222 Msa0027540:CDS
CAACAATCTCCTTCTCTCTG+GGG 0.674813 1_1:-51904054 None:intergenic
GGGTGTGGATGAGCATGTAG+TGG 0.698167 1_1:+51904639 Msa0027540:CDS
AAACCACCAAGGCAAAGACA+CGG 0.700646 1_1:-51904977 None:intergenic
AGAGGCTGGTACCTAACACG+TGG 0.705728 1_1:-51904412 None:intergenic
ATATTCCGATCCAATCACCT+GGG 0.713097 1_1:+51904924 Msa0027540:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATATGCTTTTTTTA+TGG + chr1_1:51903361-51903380 Msa0027540:intron 10.0%
!!! ATTTTCTTTGTTTTTTCAAT+TGG + chr1_1:51902231-51902250 Msa0027540:intron 15.0%
!! GATGATTATGATTAAAATTT+GGG + chr1_1:51902549-51902568 Msa0027540:intron 15.0%
!! AACAACAAAAAATATATTTG+AGG - chr1_1:51902675-51902694 None:intergenic 15.0%
!!! ATTTTTCTTCATAATACAAT+GGG + chr1_1:51902860-51902879 Msa0027540:intron 15.0%
!! ATCAAACCAATCAAATAAAA+GGG - chr1_1:51902163-51902182 None:intergenic 20.0%
!! TATCAAACCAATCAAATAAA+AGG - chr1_1:51902164-51902183 None:intergenic 20.0%
!!! TGATATACAAATTTTACACT+AGG + chr1_1:51902179-51902198 Msa0027540:intron 20.0%
!!! TTTATTGCCTATTATTTTCT+GGG + chr1_1:51902284-51902303 Msa0027540:intron 20.0%
!!! ATGTTGTTTTAAATTTTCTC+AGG + chr1_1:51902482-51902501 Msa0027540:intron 20.0%
!! GGATGATTATGATTAAAATT+TGG + chr1_1:51902548-51902567 Msa0027540:intron 20.0%
!!! TTTTATTGTTACATGTTTCT+GGG + chr1_1:51902636-51902655 Msa0027540:intron 20.0%
!! AATATATTTGAGGACTAAAT+TGG - chr1_1:51902665-51902684 None:intergenic 20.0%
!!! CATTTTTCTTCATAATACAA+TGG + chr1_1:51902859-51902878 Msa0027540:intron 20.0%
!!! TTTTTCTTCATAATACAATG+GGG + chr1_1:51902861-51902880 Msa0027540:intron 20.0%
!! TCAAAAATTGTATTGCATAT+GGG + chr1_1:51902888-51902907 Msa0027540:intron 20.0%
!! GAGACTTATTTAACTAAAAA+GGG - chr1_1:51903192-51903211 None:intergenic 20.0%
!! AGAGACTTATTTAACTAAAA+AGG - chr1_1:51903193-51903212 None:intergenic 20.0%
!! ATTAACATGCTAATTTAAAC+TGG - chr1_1:51903461-51903480 None:intergenic 20.0%
!! ACATCAAATTATACAAAACA+CGG - chr1_1:51903623-51903642 None:intergenic 20.0%
!! GATATGTTATCTTCAAAAAA+TGG + chr1_1:51903980-51903999 Msa0027540:CDS 20.0%
!!! TAAAACCCCTTTTATTTGAT+TGG + chr1_1:51902154-51902173 Msa0027540:intron 25.0%
! TCAAACCAATCAAATAAAAG+GGG - chr1_1:51902162-51902181 None:intergenic 25.0%
! TTAAAAACCGTATGTTCAAT+TGG + chr1_1:51902204-51902223 Msa0027540:intron 25.0%
! TAAAAACCGTATGTTCAATT+GGG + chr1_1:51902205-51902224 Msa0027540:intron 25.0%
! AATAAACCCAATTGAACATA+CGG - chr1_1:51902214-51902233 None:intergenic 25.0%
!!! TTTGTTTTTTCAATTGGTTG+CGG + chr1_1:51902237-51902256 Msa0027540:intron 25.0%
!! CTTTATTGCCTATTATTTTC+TGG + chr1_1:51902283-51902302 Msa0027540:intron 25.0%
! TGATTTACCCAGAAAATAAT+AGG - chr1_1:51902294-51902313 None:intergenic 25.0%
! GTAAATCATGTTATCTTAGT+GGG + chr1_1:51902306-51902325 Msa0027540:intron 25.0%
!! CTTTTATTGTTACATGTTTC+TGG + chr1_1:51902635-51902654 Msa0027540:intron 25.0%
! CTCTTATGTAAGTAAGTTTA+GGG - chr1_1:51902707-51902726 None:intergenic 25.0%
!! TTTTCTTCATAATACAATGG+GGG + chr1_1:51902862-51902881 Msa0027540:intron 25.0%
! CTCAAAAATTGTATTGCATA+TGG + chr1_1:51902887-51902906 Msa0027540:intron 25.0%
! GTTGGAAATATATGGAAAAA+TGG - chr1_1:51903062-51903081 None:intergenic 25.0%
! AATAGTACATCACATATTCT+AGG + chr1_1:51903149-51903168 Msa0027540:intron 25.0%
! TAAATCAATGGTGATAAAAG+AGG + chr1_1:51903235-51903254 Msa0027540:intron 25.0%
! TAAAATGTACTCCATCATAA+AGG - chr1_1:51903274-51903293 None:intergenic 25.0%
! TAAAATGCGTTACAAAAAGA+AGG - chr1_1:51903304-51903323 None:intergenic 25.0%
!!! TTTGAGTATCTACTTTTTAC+TGG - chr1_1:51903327-51903346 None:intergenic 25.0%
! AAGAATAAAAAAATCCAGCT+TGG - chr1_1:51903427-51903446 None:intergenic 25.0%
!!! AAGCTGGATTTTTTTATTCT+TGG + chr1_1:51903426-51903445 Msa0027540:intron 25.0%
! GGTTTAGTTATGATAGATTA+GGG - chr1_1:51903570-51903589 None:intergenic 25.0%
! AGGTTTAGTTATGATAGATT+AGG - chr1_1:51903571-51903590 None:intergenic 25.0%
! ATTCATTCTCATGTCAAAAT+TGG + chr1_1:51903806-51903825 Msa0027540:CDS 25.0%
! AGGAGATTGTTGAATTATTT+AGG + chr1_1:51904065-51904084 Msa0027540:CDS 25.0%
! CAAGAAAGTAACCAATATAA+TGG + chr1_1:51904277-51904296 Msa0027540:CDS 25.0%
!! AAAGTAACCAATATAATGGA+AGG + chr1_1:51904281-51904300 Msa0027540:CDS 25.0%
!! AACTCTAAATTTTCTGATTC+AGG + chr1_1:51904307-51904326 Msa0027540:CDS 25.0%
! AATCATCATCAGAAAATTCA+GGG - chr1_1:51904588-51904607 None:intergenic 25.0%
!! CTCATTATTATAGGTTTGTT+CGG - chr1_1:51904620-51904639 None:intergenic 25.0%
! GAACAAACCTATAATAATGA+GGG + chr1_1:51904619-51904638 Msa0027540:CDS 25.0%
! AAGGAAAAGTAATACTAGAA+CGG + chr1_1:51904807-51904826 Msa0027540:three_prime_UTR 25.0%
!!! CAAAATTTTAAAAACCACCA+AGG - chr1_1:51904991-51905010 None:intergenic 25.0%
!! TGAGACATGTGAATTATTTT+CGG + chr1_1:51905029-51905048 Msa0027540:three_prime_UTR 25.0%
! CTTGTAGTAATAATCTTATC+AGG + chr1_1:51905068-51905087 Msa0027540:three_prime_UTR 25.0%
!! ACATTGTTGGTTTATTGTGT+TGG - chr1_1:51902026-51902045 None:intergenic 30.0%
AGAACAGTCTTGAATCAAAA+AGG - chr1_1:51902102-51902121 None:intergenic 30.0%
!! GACTGTTCTCATATTAGTTT+TGG + chr1_1:51902113-51902132 Msa0027540:intron 30.0%
!!! AAGGGGTTTTAGAAATTGAA+GGG - chr1_1:51902145-51902164 None:intergenic 30.0%
!!! AAAGGGGTTTTAGAAATTGA+AGG - chr1_1:51902146-51902165 None:intergenic 30.0%
GGTAAATCATGTTATCTTAG+TGG + chr1_1:51902305-51902324 Msa0027540:intron 30.0%
GTCATTGAAACGTCAAATAT+TGG - chr1_1:51902354-51902373 None:intergenic 30.0%
CATCTTAAAATTCTACACCA+AGG - chr1_1:51902386-51902405 None:intergenic 30.0%
!!! GGTGTAGAATTTTAAGATGT+AGG + chr1_1:51902387-51902406 Msa0027540:intron 30.0%
AAAACCTAAACCAGAGAAAA+GGG - chr1_1:51902439-51902458 None:intergenic 30.0%
AAAAACCTAAACCAGAGAAA+AGG - chr1_1:51902440-51902459 None:intergenic 30.0%
TGTTAAAAGTCAGAACATTG+TGG + chr1_1:51902527-51902546 Msa0027540:intron 30.0%
CATAGACTATACTATAGTGT+TGG - chr1_1:51902579-51902598 None:intergenic 30.0%
CCTCTTATGTAAGTAAGTTT+AGG - chr1_1:51902708-51902727 None:intergenic 30.0%
CCTAAACTTACTTACATAAG+AGG + chr1_1:51902705-51902724 Msa0027540:intron 30.0%
! TTGGTAATTACAGGACATTT+AGG + chr1_1:51902740-51902759 Msa0027540:intron 30.0%
ACATTCAGAAAAGAAGCTTT+GGG + chr1_1:51902832-51902851 Msa0027540:intron 30.0%
! ATTGTATTGCATATGGGTTT+TGG + chr1_1:51902894-51902913 Msa0027540:intron 30.0%
! TTGTATTGCATATGGGTTTT+GGG + chr1_1:51902895-51902914 Msa0027540:intron 30.0%
TTTGGAAGGTTGGAAATATA+TGG - chr1_1:51903070-51903089 None:intergenic 30.0%
!!! ATGTTTTTTATGACCCTTAG+AGG + chr1_1:51903393-51903412 Msa0027540:intron 30.0%
!!! TGTTTTTTATGACCCTTAGA+GGG + chr1_1:51903394-51903413 Msa0027540:intron 30.0%
TAAAAAAATCCAGCTTGGTA+AGG - chr1_1:51903422-51903441 None:intergenic 30.0%
TCTATCATAACTAAACCTAG+AGG + chr1_1:51903573-51903592 Msa0027540:intron 30.0%
TGTAAGGACGAAAAAAGTAA+AGG - chr1_1:51903649-51903668 None:intergenic 30.0%
AAAATTGGAGGACTAAAGTA+TGG + chr1_1:51903821-51903840 Msa0027540:CDS 30.0%
ATTTCTCAAGGCAAAACAAT+AGG + chr1_1:51903888-51903907 Msa0027540:CDS 30.0%
TATTTAGGAAAGTTCAAGCT+CGG + chr1_1:51904080-51904099 Msa0027540:CDS 30.0%
! TTTCTTTTCTTCTTTGACAG+TGG - chr1_1:51904119-51904138 None:intergenic 30.0%
! AGTTTTGCCTTCCATTATAT+TGG - chr1_1:51904291-51904310 None:intergenic 30.0%
GATACTAATGCAATACCAAT+AGG + chr1_1:51904451-51904470 Msa0027540:CDS 30.0%
TCATTATCTTCAGTACCTAT+TGG - chr1_1:51904469-51904488 None:intergenic 30.0%
TGAAGATAATGAGAACATTC+AGG + chr1_1:51904477-51904496 Msa0027540:CDS 30.0%
TGACATTGATCTTGATACAA+AGG + chr1_1:51904549-51904568 Msa0027540:CDS 30.0%
GAATCATCATCAGAAAATTC+AGG - chr1_1:51904589-51904608 None:intergenic 30.0%
CGAACAAACCTATAATAATG+AGG + chr1_1:51904618-51904637 Msa0027540:CDS 30.0%
ACTGAAGATGTCTGAATTAA+GGG + chr1_1:51904684-51904703 Msa0027540:CDS 30.0%
AAACATCTAGTTAAAAGCAG+AGG - chr1_1:51904866-51904885 None:intergenic 30.0%
AGTAATAATCTTATCAGGCT+AGG + chr1_1:51905073-51905092 Msa0027540:three_prime_UTR 30.0%
GTAATAATCTTATCAGGCTA+GGG + chr1_1:51905074-51905093 Msa0027540:three_prime_UTR 30.0%
ATCATTATCCTTATGTGCTT+CGG + chr1_1:51905106-51905125 Msa0027540:three_prime_UTR 30.0%
AAACAATTTACTCCATAAGC+CGG - chr1_1:51905151-51905170 None:intergenic 30.0%
TTATAGAACTTACGAGATAC+TGG - chr1_1:51905175-51905194 None:intergenic 30.0%
TAAACCAACAATGTCGCAAA+CGG + chr1_1:51902032-51902051 Msa0027540:exon 35.0%
!!! AGGGGTTTTAGAAATTGAAG+GGG - chr1_1:51902144-51902163 None:intergenic 35.0%
TCAATGACCAATTGTAACCT+TGG + chr1_1:51902366-51902385 Msa0027540:intron 35.0%
TTCTACACCAAGGTTACAAT+TGG - chr1_1:51902376-51902395 None:intergenic 35.0%
AACAATAAAAGAGACGCTTG+TGG - chr1_1:51902626-51902645 None:intergenic 35.0%
!! CAGAGATTGTTGGTAATTAC+AGG + chr1_1:51902731-51902750 Msa0027540:intron 35.0%
!! ACATTTAGGCTTTGTTTGGA+GGG + chr1_1:51902754-51902773 Msa0027540:intron 35.0%
AGGGGTTTGAAAAAAAAGGA+AGG + chr1_1:51902788-51902807 Msa0027540:intron 35.0%
GACATTCAGAAAAGAAGCTT+TGG + chr1_1:51902831-51902850 Msa0027540:intron 35.0%
CATTCAGAAAAGAAGCTTTG+GGG + chr1_1:51902833-51902852 Msa0027540:intron 35.0%
! ATTCAGAAAAGAAGCTTTGG+GGG + chr1_1:51902834-51902853 Msa0027540:intron 35.0%
! TGTATTGCATATGGGTTTTG+GGG + chr1_1:51902896-51902915 Msa0027540:intron 35.0%
! TTACTATCGTCTCTAAGAGT+TGG - chr1_1:51903131-51903150 None:intergenic 35.0%
!! CACATATTCTAGGACCAAAA+TGG + chr1_1:51903159-51903178 Msa0027540:intron 35.0%
!! ATATTCTAGGACCAAAATGG+TGG + chr1_1:51903162-51903181 Msa0027540:intron 35.0%
! AAAAGGGTAAACCACCATTT+TGG - chr1_1:51903176-51903195 None:intergenic 35.0%
TGGTGATAAAAGAGGATAAC+TGG + chr1_1:51903243-51903262 Msa0027540:intron 35.0%
! TGTAGATTTTCCACAAGTCA+TGG + chr1_1:51903493-51903512 Msa0027540:intron 35.0%
! TAAGCTGAGTTTTCAACAGT+TGG + chr1_1:51903542-51903561 Msa0027540:intron 35.0%
!! GTTGATAGTTTGCTACCATA+GGG + chr1_1:51903595-51903614 Msa0027540:intron 35.0%
TCCTTACACGATTATCTTTG+TGG + chr1_1:51903661-51903680 Msa0027540:intron 35.0%
ACCACAAAGATAATCGTGTA+AGG - chr1_1:51903665-51903684 None:intergenic 35.0%
TATCTTTGTGGTTGTTGAGT+TGG + chr1_1:51903673-51903692 Msa0027540:intron 35.0%
ATCTTTGTGGTTGTTGAGTT+GGG + chr1_1:51903674-51903693 Msa0027540:intron 35.0%
!! GAGTTGGGTTGATATATTTC+AGG + chr1_1:51903689-51903708 Msa0027540:intron 35.0%
!! GGTTGATATATTTCAGGTTG+TGG + chr1_1:51903695-51903714 Msa0027540:intron 35.0%
GTATATTCATGCACTTCTCT+AGG + chr1_1:51903773-51903792 Msa0027540:CDS 35.0%
CATTCTCATGTCAAAATTGG+AGG + chr1_1:51903809-51903828 Msa0027540:CDS 35.0%
AGGACTAAAGTATGGTTCAA+CGG + chr1_1:51903829-51903848 Msa0027540:CDS 35.0%
! CATCTTTTGTATGTGAAGCA+AGG + chr1_1:51903855-51903874 Msa0027540:CDS 35.0%
CCTGAATTATGCGATACTAA+TGG - chr1_1:51904007-51904026 None:intergenic 35.0%
CCATTAGTATCGCATAATTC+AGG + chr1_1:51904004-51904023 Msa0027540:CDS 35.0%
GCATAATTCAGGAAAATTCC+AGG + chr1_1:51904015-51904034 Msa0027540:CDS 35.0%
! TTTCTTCAATAGGTTGAGGA+GGG - chr1_1:51904188-51904207 None:intergenic 35.0%
AGTGTTTCTTCAATAGGTTG+AGG - chr1_1:51904192-51904211 None:intergenic 35.0%
! CAACAGAGTGTTTCTTCAAT+AGG - chr1_1:51904198-51904217 None:intergenic 35.0%
! ATTGGTTACTTTCTTGCAAC+TGG - chr1_1:51904273-51904292 None:intergenic 35.0%
TCAATGTCAGACACAAGTTT+AGG - chr1_1:51904538-51904557 None:intergenic 35.0%
AACCTATAATAATGAGGGTG+TGG + chr1_1:51904624-51904643 Msa0027540:CDS 35.0%
ATCCACACCCTCATTATTAT+AGG - chr1_1:51904629-51904648 None:intergenic 35.0%
CACTGAAGATGTCTGAATTA+AGG + chr1_1:51904683-51904702 Msa0027540:CDS 35.0%
! GAGAACTGATTCTGAGTAAA+CGG + chr1_1:51904778-51904797 Msa0027540:exon 35.0%
GAAGCACATAAGGATAATGA+TGG - chr1_1:51905107-51905126 None:intergenic 35.0%
GAGATACTAACCAACGTTGT+TGG - chr1_1:51902073-51902092 None:intergenic 40.0%
! ATTGGTTGCGGTTTTCTCAT+AGG + chr1_1:51902249-51902268 Msa0027540:intron 40.0%
! TTGCGGTTTTCTCATAGGAA+AGG + chr1_1:51902254-51902273 Msa0027540:intron 40.0%
!!! ATTAGAAGTGCCCTTTTCTC+TGG + chr1_1:51902426-51902445 Msa0027540:intron 40.0%
!! TAAGAGGCATCAGAGATTGT+TGG + chr1_1:51902721-51902740 Msa0027540:intron 40.0%
!! CAGGACATTTAGGCTTTGTT+TGG + chr1_1:51902750-51902769 Msa0027540:intron 40.0%
!! GACATTTAGGCTTTGTTTGG+AGG + chr1_1:51902753-51902772 Msa0027540:intron 40.0%
!!! ATATGGGTTTTGGGGAGTTT+TGG + chr1_1:51902904-51902923 Msa0027540:intron 40.0%
!! TAAGAGTTGGTTTGGGAGTT+TGG - chr1_1:51903118-51903137 None:intergenic 40.0%
! TCGTCTCTAAGAGTTGGTTT+GGG - chr1_1:51903125-51903144 None:intergenic 40.0%
! ATCGTCTCTAAGAGTTGGTT+TGG - chr1_1:51903126-51903145 None:intergenic 40.0%
AACTGGTGTGTCCTTTATGA+TGG + chr1_1:51903260-51903279 Msa0027540:intron 40.0%
ACTACAATGACCATGACTTG+TGG - chr1_1:51903506-51903525 None:intergenic 40.0%
GTAGCAAACTATCAACCTCT+AGG - chr1_1:51903591-51903610 None:intergenic 40.0%
!! GGTTGATAGTTTGCTACCAT+AGG + chr1_1:51903594-51903613 Msa0027540:intron 40.0%
! CTTTTGTATGTGAAGCAAGG+AGG + chr1_1:51903858-51903877 Msa0027540:CDS 40.0%
TCAAGGCAAAACAATAGGCA+TGG + chr1_1:51903893-51903912 Msa0027540:CDS 40.0%
CAAGGCAAAACAATAGGCAT+GGG + chr1_1:51903894-51903913 Msa0027540:CDS 40.0%
GCAGAAATAGGAACGATGAT+GGG + chr1_1:51903927-51903946 Msa0027540:CDS 40.0%
TCAACAATCTCCTTCTCTCT+GGG - chr1_1:51904058-51904077 None:intergenic 40.0%
TTCAACAATCTCCTTCTCTC+TGG - chr1_1:51904059-51904078 None:intergenic 40.0%
TTTGCTCTTTAACATGCCCT+CGG - chr1_1:51904153-51904172 None:intergenic 40.0%
! GTTTCTTCAATAGGTTGAGG+AGG - chr1_1:51904189-51904208 None:intergenic 40.0%
AAGAAACACTCTGTTGAGCA+AGG + chr1_1:51904202-51904221 Msa0027540:CDS 40.0%
GAGCAAGGAAAGAGAAGTAA+TGG + chr1_1:51904217-51904236 Msa0027540:CDS 40.0%
! AGGAAAGAGAAGTAATGGAG+AGG + chr1_1:51904222-51904241 Msa0027540:CDS 40.0%
AGAAGCCAACATTGCTTCTT+CGG + chr1_1:51904351-51904370 Msa0027540:CDS 40.0%
! TTTCTTTGGAAAACTGACCG+AGG - chr1_1:51904382-51904401 None:intergenic 40.0%
TCAGCCAAGTTATTAGAGAG+AGG - chr1_1:51904433-51904452 None:intergenic 40.0%
! TCAGACACAAGTTTAGGTTC+TGG - chr1_1:51904532-51904551 None:intergenic 40.0%
GCATGTAGTGGTTCAAAATG+AGG + chr1_1:51904651-51904670 Msa0027540:CDS 40.0%
AGGGTTCTCCAAAATGAAGA+AGG + chr1_1:51904732-51904751 Msa0027540:CDS 40.0%
GGGTTCTCCAAAATGAAGAA+GGG + chr1_1:51904733-51904752 Msa0027540:CDS 40.0%
! GAGATCTCCCTTCTTCATTT+TGG - chr1_1:51904743-51904762 None:intergenic 40.0%
AATATTCCGATCCAATCACC+TGG + chr1_1:51904923-51904942 Msa0027540:three_prime_UTR 40.0%
ATATTCCGATCCAATCACCT+GGG + chr1_1:51904924-51904943 Msa0027540:three_prime_UTR 40.0%
! TTTTCGGTGACTCAATCTTG+TGG + chr1_1:51905045-51905064 Msa0027540:three_prime_UTR 40.0%
!! TTGTCTCTCTTTTGGTTGTC+CGG + chr1_1:51905129-51905148 Msa0027540:three_prime_UTR 40.0%
TGAACCGTTTGCGACATTGT+TGG - chr1_1:51902039-51902058 None:intergenic 45.0%
!! AGTGCCCTTTTCTCTGGTTT+AGG + chr1_1:51902432-51902451 Msa0027540:intron 45.0%
!! TAGGCTTTGTTTGGAGGGTA+AGG + chr1_1:51902759-51902778 Msa0027540:intron 45.0%
!! AGGCTTTGTTTGGAGGGTAA+GGG + chr1_1:51902760-51902779 Msa0027540:intron 45.0%
TTTGTTTGGAGGGTAAGGGA+GGG + chr1_1:51902764-51902783 Msa0027540:intron 45.0%
GGGGAGGGGTTTGAAAAAAA+AGG + chr1_1:51902784-51902803 Msa0027540:intron 45.0%
!! GTTGGTTTGGGAGTTTGGAA+GGG - chr1_1:51903113-51903132 None:intergenic 45.0%
!! AGTTGGTTTGGGAGTTTGGA+AGG - chr1_1:51903114-51903133 None:intergenic 45.0%
CTTGGTAAGGTTCCCTCTAA+GGG - chr1_1:51903409-51903428 None:intergenic 45.0%
ATACAAAACACGGTGCCCTA+TGG - chr1_1:51903613-51903632 None:intergenic 45.0%
TTCCAAAACCACGTGAACAC+GGG - chr1_1:51903742-51903761 None:intergenic 45.0%
CTTCCAAAACCACGTGAACA+CGG - chr1_1:51903743-51903762 None:intergenic 45.0%
GGAGGAACTCAGATTTCTCA+AGG + chr1_1:51903876-51903895 Msa0027540:CDS 45.0%
AATAGGCATGGGTCATCAAG+AGG + chr1_1:51903905-51903924 Msa0027540:CDS 45.0%
GGTCATCAAGAGGCAGAAAT+AGG + chr1_1:51903915-51903934 Msa0027540:CDS 45.0%
GGCAGAAATAGGAACGATGA+TGG + chr1_1:51903926-51903945 Msa0027540:CDS 45.0%
CAACAATCTCCTTCTCTCTG+GGG - chr1_1:51904057-51904076 None:intergenic 45.0%
! AGAAGTAATGGAGAGGACGA+TGG + chr1_1:51904229-51904248 Msa0027540:CDS 45.0%
CTTGCAACTGGTCAGAGTTA+AGG - chr1_1:51904261-51904280 None:intergenic 45.0%
TTCTGATTCAGGTGCTCCAA+AGG + chr1_1:51904318-51904337 Msa0027540:CDS 45.0%
TCTGATTCAGGTGCTCCAAA+GGG + chr1_1:51904319-51904338 Msa0027540:CDS 45.0%
GTGGAACAGGAGACTTTCTT+TGG - chr1_1:51904396-51904415 None:intergenic 45.0%
CCAAGTTATTAGAGAGAGGC+TGG - chr1_1:51904429-51904448 None:intergenic 45.0%
CCAGCCTCTCTCTAATAACT+TGG + chr1_1:51904426-51904445 Msa0027540:CDS 45.0%
AATGAAGAAGGGAGATCTCG+TGG + chr1_1:51904744-51904763 Msa0027540:CDS 45.0%
TCTGAGTAAACGGTACGAGA+AGG + chr1_1:51904788-51904807 Msa0027540:three_prime_UTR 45.0%
TAATCACCGTGTCTTTGCCT+TGG + chr1_1:51904971-51904990 Msa0027540:three_prime_UTR 45.0%
AAACCACCAAGGCAAAGACA+CGG - chr1_1:51904980-51904999 None:intergenic 45.0%
AGAGACAACCGAAGCACATA+AGG - chr1_1:51905117-51905136 None:intergenic 45.0%
! TGCTTCGGTTGTCTCTCTTT+TGG + chr1_1:51905121-51905140 Msa0027540:three_prime_UTR 45.0%
!! TCTTTTGGTTGTCCGGCTTA+TGG + chr1_1:51905136-51905155 Msa0027540:three_prime_UTR 45.0%
!!! TATTATTTAAAATAAATGAA+TGG - chr1_1:51903217-51903236 None:intergenic 5.0%
!!! TATTTTAAATAATAAATCAA+TGG + chr1_1:51903223-51903242 Msa0027540:intron 5.0%
! CTTTGTTTGGAGGGTAAGGG+AGG + chr1_1:51902763-51902782 Msa0027540:intron 50.0%
TTGTTTGGAGGGTAAGGGAG+GGG + chr1_1:51902765-51902784 Msa0027540:intron 50.0%
!!! TGGGTTTTGGGGAGTTTTGG+AGG + chr1_1:51902907-51902926 Msa0027540:intron 50.0%
!!! GGGTTTTGGGGAGTTTTGGA+GGG + chr1_1:51902908-51902927 Msa0027540:intron 50.0%
!! AAGGGAAGGCTTTGGAAGGT+TGG - chr1_1:51903080-51903099 None:intergenic 50.0%
TTTGGGAGTTTGGAAGGGAG+GGG - chr1_1:51903108-51903127 None:intergenic 50.0%
GTTTGGGAGTTTGGAAGGGA+GGG - chr1_1:51903109-51903128 None:intergenic 50.0%
GCTTGGTAAGGTTCCCTCTA+AGG - chr1_1:51903410-51903429 None:intergenic 50.0%
TAGAGGGAACCTTACCAAGC+TGG + chr1_1:51903410-51903429 Msa0027540:intron 50.0%
CACGGGAAACACTTGTCTTC+TGG - chr1_1:51903725-51903744 None:intergenic 50.0%
AAGTGTTTCCCGTGTTCACG+TGG + chr1_1:51903731-51903750 Msa0027540:CDS 50.0%
! TTCCCGTGTTCACGTGGTTT+TGG + chr1_1:51903737-51903756 Msa0027540:CDS 50.0%
AAGAAAGTTGAAGCACGCCG+AGG + chr1_1:51904133-51904152 Msa0027540:CDS 50.0%
AGAAAGTTGAAGCACGCCGA+GGG + chr1_1:51904134-51904153 Msa0027540:CDS 50.0%
CCAACATTGCTTCTTCGGCT+CGG + chr1_1:51904356-51904375 Msa0027540:CDS 50.0%
AGTCTCCTGTTCCACGTGTT+AGG + chr1_1:51904401-51904420 Msa0027540:CDS 50.0%
TGGTACCTAACACGTGGAAC+AGG - chr1_1:51904409-51904428 None:intergenic 50.0%
CAAAGTCTCGTGGCGTGAAA+GGG + chr1_1:51904713-51904732 Msa0027540:CDS 50.0%
TCGAACCCAGGTGATTGGAT+CGG - chr1_1:51904932-51904951 None:intergenic 50.0%
TACACTCGAACCCAGGTGAT+TGG - chr1_1:51904937-51904956 None:intergenic 50.0%
CTCATCGTCGCCAACAACGT+TGG + chr1_1:51902060-51902079 Msa0027540:CDS 55.0%
GGTTTGGGAGTTTGGAAGGG+AGG - chr1_1:51903110-51903129 None:intergenic 55.0%
TTCAAGCTCGGTTGCGTGAG+AGG + chr1_1:51904092-51904111 Msa0027540:CDS 55.0%
CCGAGCCGAAGAAGCAATGT+TGG - chr1_1:51904359-51904378 None:intergenic 55.0%
AGAGGCTGGTACCTAACACG+TGG - chr1_1:51904415-51904434 None:intergenic 55.0%
GGGTGTGGATGAGCATGTAG+TGG + chr1_1:51904639-51904658 Msa0027540:CDS 55.0%
! AGGGCACTTGCAAAGTCTCG+TGG + chr1_1:51904703-51904722 Msa0027540:CDS 55.0%
GCAAAGTCTCGTGGCGTGAA+AGG + chr1_1:51904712-51904731 Msa0027540:CDS 55.0%
CACCTGGGTTCGAGTGTAGT+TGG + chr1_1:51904939-51904958 Msa0027540:three_prime_UTR 55.0%
GACCAACTACACTCGAACCC+AGG - chr1_1:51904944-51904963 None:intergenic 55.0%
TCACCGTGTCTTTGCCTTGG+TGG + chr1_1:51904974-51904993 Msa0027540:three_prime_UTR 55.0%
TTTGGAGGGTAAGGGAGGGG+AGG + chr1_1:51902768-51902787 Msa0027540:intron 60.0%
TTGGAGGGTAAGGGAGGGGA+GGG + chr1_1:51902769-51902788 Msa0027540:intron 60.0%
!! GGGGAAGGGAAGGCTTTGGA+AGG - chr1_1:51903084-51903103 None:intergenic 60.0%
GAGTTTGGAAGGGAGGGGAG+GGG - chr1_1:51903103-51903122 None:intergenic 60.0%
GGAGTTTGGAAGGGAGGGGA+GGG - chr1_1:51903104-51903123 None:intergenic 60.0%
TTCCAGGCCACTTCATCCCC+TGG + chr1_1:51904031-51904050 Msa0027540:CDS 60.0%
!! TCTCCTTCTCTCTGGGGCCA+GGG - chr1_1:51904051-51904070 None:intergenic 60.0%
!! ATCTCCTTCTCTCTGGGGCC+AGG - chr1_1:51904052-51904071 None:intergenic 60.0%
GCTTCTCGAGACTCGCCCTT+TGG - chr1_1:51904337-51904356 None:intergenic 60.0%
!! TTGCTTCTTCGGCTCGGCCT+CGG + chr1_1:51904362-51904381 Msa0027540:CDS 60.0%
TGGAGGGTAAGGGAGGGGAG+GGG + chr1_1:51902770-51902789 Msa0027540:intron 65.0%
GGGAGGGGAAGGGAAGGCTT+TGG - chr1_1:51903088-51903107 None:intergenic 65.0%
TGGAAGGGAGGGGAGGGGAA+GGG - chr1_1:51903098-51903117 None:intergenic 65.0%
TTGGAAGGGAGGGGAGGGGA+AGG - chr1_1:51903099-51903118 None:intergenic 65.0%
GGGAGTTTGGAAGGGAGGGG+AGG - chr1_1:51903105-51903124 None:intergenic 65.0%
! TCTGGGGCCAGGGGATGAAG+TGG - chr1_1:51904041-51904060 None:intergenic 65.0%
ATCCCCTGGCCCCAGAGAGA+AGG + chr1_1:51904045-51904064 Msa0027540:CDS 65.0%
!! CTCCTTCTCTCTGGGGCCAG+GGG - chr1_1:51904050-51904069 None:intergenic 65.0%
AGGGAGGGGAGGGGAAGGGA+AGG - chr1_1:51903094-51903113 None:intergenic 70.0%
GGCCAGGGGATGAAGTGGCC+TGG - chr1_1:51904036-51904055 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51902010 51905214 51902010 ID=Msa0027540;Name=Msa0027540
chr1_1 mRNA 51902010 51905214 51902010 ID=Msa0027540-mRNA-1;Parent=Msa0027540;Name=Msa0027540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=32|1|1|1|1|1|2|428|371
chr1_1 exon 51902010 51902081 51902010 ID=Msa0027540-mRNA-1:exon:15247;Parent=Msa0027540-mRNA-1
chr1_1 exon 51903711 51905214 51903711 ID=Msa0027540-mRNA-1:exon:15248;Parent=Msa0027540-mRNA-1
chr1_1 five_prime_UTR 51902010 51902041 51902010 ID=Msa0027540-mRNA-1:five_prime_utr;Parent=Msa0027540-mRNA-1
chr1_1 CDS 51902042 51902081 51902042 ID=Msa0027540-mRNA-1:cds;Parent=Msa0027540-mRNA-1
chr1_1 CDS 51903711 51904786 51903711 ID=Msa0027540-mRNA-1:cds;Parent=Msa0027540-mRNA-1
chr1_1 three_prime_UTR 51904787 51905214 51904787 ID=Msa0027540-mRNA-1:three_prime_utr;Parent=Msa0027540-mRNA-1
Gene Sequence

>Msa0027540

ATGTCGCAAACGGTTCATCTCATCGTCGCCAACAACGTTGGTTGTGGAATGCCAGAAGACAAGTGTTTCCCGTGTTCACGTGGTTTTGGAAGAACAACTGTTGTATATTCATGCACTTCTCTAGGTCGTCGTAGAATTCATTCTCATGTCAAAATTGGAGGACTAAAGTATGGTTCAACGGCTGCATCTTTTGTATGTGAAGCAAGGAGGAACTCAGATTTCTCAAGGCAAAACAATAGGCATGGGTCATCAAGAGGCAGAAATAGGAACGATGATGGGAGAGATATCTTTGAGAATTTTGAAGAAGAAGATATGTTATCTTCAAAAAATGGACCATTAGTATCGCATAATTCAGGAAAATTCCAGGCCACTTCATCCCCTGGCCCCAGAGAGAAGGAGATTGTTGAATTATTTAGGAAAGTTCAAGCTCGGTTGCGTGAGAGGACCACTGTCAAAGAAGAAAAGAAAGTTGAAGCACGCCGAGGGCATGTTAAAGAGCAAAGTGCTGTAGATTCCCTCCTCAACCTATTGAAGAAACACTCTGTTGAGCAAGGAAAGAGAAGTAATGGAGAGGACGATGGAAAAGACCTTAACTCTGACCAGTTGCAAGAAAGTAACCAATATAATGGAAGGCAAAACTCTAAATTTTCTGATTCAGGTGCTCCAAAGGGCGAGTCTCGAGAAGCCAACATTGCTTCTTCGGCTCGGCCTCGGTCAGTTTTCCAAAGAAAGTCTCCTGTTCCACGTGTTAGGTACCAGCCTCTCTCTAATAACTTGGCTGATACTAATGCAATACCAATAGGTACTGAAGATAATGAGAACATTCAGGATCAATTAGATTCGAAACTTGATGTCGAGCCAGAACCTAAACTTGTGTCTGACATTGATCTTGATACAAAGGATGAGACGTCTTTCCCTGAATTTTCTGATGATGATTCTCATGACTCCGAACAAACCTATAATAATGAGGGTGTGGATGAGCATGTAGTGGTTCAAAATGAGGATTTGAATGCACTGAAGATGTCTGAATTAAGGGCACTTGCAAAGTCTCGTGGCGTGAAAGGGTTCTCCAAAATGAAGAAGGGAGATCTCGTGGAGCTACTAACTGAGAACTGA

Protein sequence

>Msa0027540

MSQTVHLIVANNVGCGMPEDKCFPCSRGFGRTTVVYSCTSLGRRRIHSHVKIGGLKYGSTAASFVCEARRNSDFSRQNNRHGSSRGRNRNDDGRDIFENFEEEDMLSSKNGPLVSHNSGKFQATSSPGPREKEIVELFRKVQARLRERTTVKEEKKVEARRGHVKEQSAVDSLLNLLKKHSVEQGKRSNGEDDGKDLNSDQLQESNQYNGRQNSKFSDSGAPKGESREANIASSARPRSVFQRKSPVPRVRYQPLSNNLADTNAIPIGTEDNENIQDQLDSKLDVEPEPKLVSDIDLDTKDETSFPEFSDDDSHDSEQTYNNEGVDEHVVVQNEDLNALKMSELRALAKSRGVKGFSKMKKGDLVELLTEN*