AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1431000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1431000 MtrunA17_Chr4g0071101 89.867 750 67 5 1 747 1 744 0.0 1338
Msa1431000 MtrunA17_Chr1g0187011 49.596 619 271 5 148 747 187 783 0.0 593
Msa1431000 MtrunA17_Chr6g0484411 46.284 592 297 5 143 732 188 760 5.08e-161 486
Msa1431000 MtrunA17_Chr6g0451621 43.924 576 283 5 172 732 146 696 5.30e-147 456
Msa1431000 MtrunA17_Chr8g0391141 42.230 547 269 7 171 713 100 603 7.80e-131 402
Msa1431000 MtrunA17_Chr8g0366041 87.783 221 26 1 188 407 1 221 1.12e-130 386
Msa1431000 MtrunA17_Chr2g0330811 41.497 588 309 12 182 745 171 747 1.28e-121 382
Msa1431000 MtrunA17_Chr8g0366051 96.703 91 3 0 472 562 7 97 9.57e-52 175
Msa1431000 MtrunA17_Chr4g0067911 40.127 157 81 4 581 734 185 331 5.74e-24 103
Msa1431000 MtrunA17_Chr4g0033621 37.569 181 102 4 547 727 135 304 4.03e-23 102
Msa1431000 MtrunA17_Chr1g0171521 39.568 139 74 4 568 700 130 264 2.92e-21 94.7
Msa1431000 MtrunA17_Chr8g0391361 35.374 147 89 2 555 698 5 148 1.67e-20 89.4
Msa1431000 MtrunA17_Chr6g0449261 28.780 205 139 3 534 734 89 290 2.52e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1431000 AT4G29750.1 50.902 776 318 11 20 749 46 804 0.0 716
Msa1431000 AT4G29750.2 50.902 776 318 11 20 749 46 804 0.0 716
Msa1431000 AT3G23070.1 47.492 598 284 7 165 747 209 791 3.06e-175 525
Msa1431000 AT4G14510.1 47.512 623 273 9 165 747 210 818 4.23e-175 526
Msa1431000 AT3G18390.1 45.918 588 291 7 156 732 221 792 1.37e-163 494
Msa1431000 AT3G01370.1 43.072 599 318 6 164 751 153 739 1.55e-150 465
Msa1431000 AT5G16180.1 37.688 597 311 7 146 737 177 717 1.69e-110 352
Msa1431000 AT5G16180.2 36.019 422 210 6 146 563 177 542 4.36e-61 215
Msa1431000 AT3G25440.2 36.022 186 108 4 568 745 85 267 2.51e-26 112
Msa1431000 AT3G25440.4 37.576 165 95 3 584 743 13 174 3.27e-26 109
Msa1431000 AT3G25440.3 37.576 165 95 3 584 743 13 174 3.27e-26 109
Msa1431000 AT3G25440.5 37.576 165 95 3 584 743 13 174 3.27e-26 109
Msa1431000 AT3G25440.1 36.022 186 108 4 568 745 149 331 4.19e-26 112
Msa1431000 AT2G28480.1 37.569 181 102 4 547 727 126 295 2.51e-24 106
Msa1431000 AT4G13070.1 41.463 123 67 3 583 704 173 291 1.29e-20 94.4
Msa1431000 AT3G27550.2 30.573 157 103 2 581 734 133 286 1.15e-13 74.7
Msa1431000 AT3G27550.3 30.573 157 103 2 581 734 77 230 1.49e-13 74.3
Msa1431000 AT3G27550.1 30.573 157 103 2 581 734 77 230 1.49e-13 74.3

Find 189 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCGTGACAACAAGCTTT+TGG 0.215837 tig0026775:+10488 None:intergenic
AACCTTACTTTCTAGAAATA+AGG 0.223126 tig0026775:-11390 Msa1431000:CDS
CGAATTTGAAAATGTGGTTT+AGG 0.236636 tig0026775:+14957 None:intergenic
AGGAATATATTGTAATTTAC+AGG 0.243412 tig0026775:-11370 Msa1431000:CDS
GAAAATGTGGTTTAGGGTTT+TGG 0.266699 tig0026775:+14964 None:intergenic
CAATTACCTGCTGTGGTTCC+AGG 0.270048 tig0026775:-13575 Msa1431000:CDS
CACGATAAATAATTATTATA+TGG 0.271438 tig0026775:+10544 None:intergenic
TGTGGTTGTTCCACTAGTTC+TGG 0.272480 tig0026775:+14764 None:intergenic
TTCCCAACTTCTTGTTTACT+TGG 0.294491 tig0026775:+11146 None:intergenic
TTGCTTAATCAGAGTAAAAC+TGG 0.294825 tig0026775:-13932 Msa1431000:intron
CTTTCTCTTCCTCGTCTTGT+TGG 0.296198 tig0026775:+11282 None:intergenic
CATCCTATCATTAGATGTAT+AGG 0.301240 tig0026775:+13267 None:intergenic
ATGAAGCCATACTTACTTCT+AGG 0.301568 tig0026775:-10829 Msa1431000:intron
TAAGCATATTGCGATATCTT+TGG 0.302210 tig0026775:-10616 Msa1431000:CDS
GGGACCATTTATGTCGAATT+TGG 0.303111 tig0026775:+14855 None:intergenic
ATTTCACATGTTACATTACT+TGG 0.304112 tig0026775:+9600 None:intergenic
AGGTTCAGTGTTGGAGTTGC+TGG 0.308508 tig0026775:-14434 Msa1431000:CDS
ACACCATATATCAGATTTAC+AGG 0.309479 tig0026775:-10239 Msa1431000:CDS
ATTTATGTAAATATTTATTT+CGG 0.317577 tig0026775:-9572 Msa1431000:three_prime_UTR
TTGTCTCTCAGTCAGGGTTT+TGG 0.325654 tig0026775:+11319 None:intergenic
CTGACCAAATTCGACATAAA+TGG 0.334859 tig0026775:-14859 Msa1431000:CDS
GAGATCTTTGTTTAGGAAGA+TGG 0.336007 tig0026775:-10860 Msa1431000:CDS
AGCAGACCTTCCAACTGATT+TGG 0.336227 tig0026775:-10902 Msa1431000:CDS
GAATTTGAAAATGTGGTTTA+GGG 0.336763 tig0026775:+14958 None:intergenic
AAATTCTGGTGGTTCTGTTA+TGG 0.337329 tig0026775:-14591 Msa1431000:CDS
TCTCCTGTAAATCTGATATA+TGG 0.341489 tig0026775:+10236 None:intergenic
ATGAAGAGAGATCTTTGTTT+AGG 0.342661 tig0026775:-10867 Msa1431000:CDS
CATGTCAGTCATTTCCTTGT+TGG 0.348961 tig0026775:+13502 None:intergenic
TCTCAAATGCCGTTACTTGC+TGG 0.349600 tig0026775:-11215 Msa1431000:CDS
TTCCTTATTTCTAGAAAGTA+AGG 0.350503 tig0026775:+11388 None:intergenic
ACTGAGAAGATAAACAATAA+TGG 0.357339 tig0026775:-9731 Msa1431000:three_prime_UTR
AAACGGGTACAGCGAAATTC+TGG 0.358562 tig0026775:-14605 Msa1431000:CDS
AAATCAGTTGGAAGGTCTGC+TGG 0.363738 tig0026775:+10904 None:intergenic
TGGGTCCGCGCTTCAAAGAT+TGG 0.371657 tig0026775:-13631 Msa1431000:CDS
GAGGTTGTGGGTGTTCCTCT+TGG 0.371698 tig0026775:+14738 None:intergenic
GTATTAGTAGTTTGAAGAAA+AGG 0.382826 tig0026775:-14541 Msa1431000:CDS
TTCCAAGGCGTTTATCTCCT+TGG 0.384425 tig0026775:-14703 Msa1431000:CDS
TAGGGCAGCAACCGCCAATT+GGG 0.384752 tig0026775:-11177 Msa1431000:CDS
AACCTTCTGTTGGATGAGTT+GGG 0.390797 tig0026775:-13650 Msa1431000:CDS
CTGAGAAGATAAACAATAAT+GGG 0.391960 tig0026775:-9730 Msa1431000:three_prime_UTR
TTCTTACCTAGAAGTAAGTA+TGG 0.393391 tig0026775:+10823 None:intergenic
AAGGAGAAGTAATACTGAAT+TGG 0.396918 tig0026775:-14522 Msa1431000:CDS
TGCTGGTATTACTCAGGAAT+TGG 0.397390 tig0026775:-14417 Msa1431000:CDS
ATTCAGTGTAGAGTAGAGTT+TGG 0.402904 tig0026775:+10061 None:intergenic
CAACCTTCTGTTGGATGAGT+TGG 0.405542 tig0026775:-13651 Msa1431000:CDS
ATCCTATCATTAGATGTATA+GGG 0.412690 tig0026775:+13268 None:intergenic
CTAGGGCAGCAACCGCCAAT+TGG 0.414139 tig0026775:-11178 Msa1431000:CDS
CTTGGAAACTCAAAATTAAG+AGG 0.416191 tig0026775:+14719 None:intergenic
TTTCGGTATAAGAATGATGA+AGG 0.419967 tig0026775:-9555 Msa1431000:three_prime_UTR
AGGTTGTGGGTGTTCCTCTT+GGG 0.420559 tig0026775:+14739 None:intergenic
GAGAAATACCTTGAGTTCTT+CGG 0.424079 tig0026775:+13243 None:intergenic
AACTCAAAATTAAGAGGTTG+TGG 0.427382 tig0026775:+14725 None:intergenic
CAACCAAGTAAACAAGAAGT+TGG 0.431444 tig0026775:-11149 Msa1431000:CDS
ATATCGCAATATGCTTAACT+TGG 0.431744 tig0026775:+10622 None:intergenic
TTCTACGCAAGGCAGCTTGT+AGG 0.432727 tig0026775:+13856 None:intergenic
AAGTAATGTAACATGTGAAA+TGG 0.434746 tig0026775:-9598 Msa1431000:three_prime_UTR
TTTCACATGTTACATTACTT+GGG 0.436982 tig0026775:+9601 None:intergenic
TTGGGGTATTCCTACGACAT+TGG 0.437569 tig0026775:+9619 None:intergenic
ATAGGGAACTCCACGTTTGA+TGG 0.437793 tig0026775:+13285 None:intergenic
ATGCATTTGCAGAAATTGAC+TGG 0.442160 tig0026775:-11416 Msa1431000:intron
ATTGGCGGAGAAGTTGATTC+CGG 0.442381 tig0026775:-14504 Msa1431000:CDS
GGTATTGTGGTGTGGCGATC+GGG 0.444388 tig0026775:-13908 Msa1431000:CDS
GTTGCAGAGACTGAGAAATA+TGG 0.447718 tig0026775:-14474 Msa1431000:CDS
ACTTGGTTGATGTCCCCAAT+TGG 0.449038 tig0026775:+11163 None:intergenic
GAAGGATTTAGCTAAAATAC+AGG 0.450289 tig0026775:-10938 Msa1431000:CDS
TCTTACACGAAAGTATATAA+TGG 0.454878 tig0026775:-13833 Msa1431000:CDS
CGAATTTGGTCAGAGAAACT+TGG 0.461613 tig0026775:+14869 None:intergenic
TCTCGATTAAAAGATTCAAT+AGG 0.464473 tig0026775:+13731 None:intergenic
TTCCCTATACATCTAATGAT+AGG 0.466667 tig0026775:-13270 Msa1431000:CDS
AAGCTTGTTGTCACGAAGAC+AGG 0.466888 tig0026775:-10484 Msa1431000:CDS
TGTTGCTGTTGTTCTTGCCA+TGG 0.469337 tig0026775:+14803 None:intergenic
GTTGCTGTTGTTCTTGCCAT+GGG 0.469452 tig0026775:+14804 None:intergenic
AATGATGAGAGAATCTACTT+TGG 0.470218 tig0026775:-11123 Msa1431000:CDS
AATAATTATTATATGGCCCT+TGG 0.473196 tig0026775:+10551 None:intergenic
GGTAATTGATCAGCATCAAC+AGG 0.474127 tig0026775:+13590 None:intergenic
TGGAACCCTTGCTGAGACTA+GGG 0.474177 tig0026775:-11195 Msa1431000:CDS
AGATCTTTGTTTAGGAAGAT+GGG 0.477491 tig0026775:-10859 Msa1431000:CDS
CTGGAACCCTTGCTGAGACT+AGG 0.478799 tig0026775:-11196 Msa1431000:CDS
CATTCAGACTTCTTCCGTAT+GGG 0.480915 tig0026775:-13541 Msa1431000:CDS
TGGACAATTCAGTGGATGTT+GGG 0.481308 tig0026775:-13796 Msa1431000:CDS
GATCGAACTCAACCTTCTGT+TGG 0.482859 tig0026775:-13660 Msa1431000:CDS
CGAGGTCTTTCATGTCATCA+TGG 0.485625 tig0026775:+10021 None:intergenic
AGACTCTGCAGAGTATTTGA+AGG 0.486990 tig0026775:-13711 Msa1431000:CDS
AGACAAAGATAATGTGAAAC+GGG 0.489498 tig0026775:-14621 Msa1431000:CDS
TGAAATAAGTGTGAAAGAAA+TGG 0.489780 tig0026775:-13759 Msa1431000:CDS
TTGATCAGCATCAACAGGTA+AGG 0.490123 tig0026775:+13595 None:intergenic
AGGTATTGTGGTGTGGCGAT+CGG 0.490697 tig0026775:-13909 Msa1431000:CDS
AGTCTCTGCAACTCATGTTC+CGG 0.491693 tig0026775:+14485 None:intergenic
AACCAAGTAAACAAGAAGTT+GGG 0.491842 tig0026775:-11148 Msa1431000:CDS
GGGTGTTCCTCTTGGGATTG+TGG 0.496204 tig0026775:+14746 None:intergenic
AAGACAAAGATAATGTGAAA+CGG 0.505781 tig0026775:-14622 Msa1431000:CDS
GTTAATGTCTCCAAATCAGT+TGG 0.506886 tig0026775:+10892 None:intergenic
GTGTTTGGGAAGCTAATTTG+AGG 0.509014 tig0026775:+14834 None:intergenic
CCATTCAGACTTCTTCCGTA+TGG 0.509793 tig0026775:-13542 Msa1431000:CDS
TGTTTGGGAAGCTAATTTGA+GGG 0.512273 tig0026775:+14835 None:intergenic
CATATAATAATTATTTATCG+TGG 0.512686 tig0026775:-10543 Msa1431000:CDS
TTATACCCTGGAACCACAGC+AGG 0.514036 tig0026775:+13569 None:intergenic
AAAGTGCGAATTTGAAAATG+TGG 0.516033 tig0026775:+14951 None:intergenic
TTCCAATTCCAACCACAAAA+CGG 0.516825 tig0026775:-14924 Msa1431000:CDS
TGCATTTGCAGAAATTGACT+GGG 0.522489 tig0026775:-11415 Msa1431000:intron
CACGAAAGTATATAATGGTA+AGG 0.522498 tig0026775:-13828 Msa1431000:CDS
TGCTGATCAATTACCTGCTG+TGG 0.523115 tig0026775:-13582 Msa1431000:CDS
TGCCAAGGAGATAAACGCCT+TGG 0.525681 tig0026775:+14701 None:intergenic
GGTAGGCGGGATGTTTATGC+TGG 0.532035 tig0026775:-10720 Msa1431000:CDS
ACGGCGCCACACTTTGCCCT+TGG 0.532852 tig0026775:-13461 Msa1431000:intron
GAGAAGTAATACTGAATTGG+CGG 0.534782 tig0026775:-14519 Msa1431000:CDS
AAACAAGGTTTCACCCCATA+CGG 0.539368 tig0026775:+13527 None:intergenic
CATGAGTGAAGAAGAATCGA+TGG 0.544193 tig0026775:-13687 Msa1431000:CDS
AATTCAGTGGATGTTGGGAG+TGG 0.546760 tig0026775:-13791 Msa1431000:CDS
GGAAGAAGTAGAGAACTTCA+AGG 0.547852 tig0026775:-13361 Msa1431000:CDS
ATGGTGGAGAGGTTCAGTGT+TGG 0.549002 tig0026775:-14443 Msa1431000:CDS
AATTACCTGCTGTGGTTCCA+GGG 0.549523 tig0026775:-13574 Msa1431000:CDS
TTCACATGTTACATTACTTG+GGG 0.553912 tig0026775:+9602 None:intergenic
ACTCAAAATTAAGAGGTTGT+GGG 0.554963 tig0026775:+14726 None:intergenic
CTTTGGAAGCTGAGAGTGGT+GGG 0.555129 tig0026775:-10599 Msa1431000:CDS
GTGGACAATTCAGTGGATGT+TGG 0.556615 tig0026775:-13797 Msa1431000:CDS
TTGCTGCCCTAGTCTCAGCA+AGG 0.558727 tig0026775:+11189 None:intergenic
GGAATATATTGTAATTTACA+GGG 0.559154 tig0026775:-11369 Msa1431000:CDS
GAGAAATATGGCGTTGAGGA+TGG 0.559402 tig0026775:-14462 Msa1431000:CDS
GAGTAAAACTGGAGGTATTG+TGG 0.560101 tig0026775:-13921 Msa1431000:CDS
AAATATGGCGTTGAGGATGG+TGG 0.563812 tig0026775:-14459 Msa1431000:CDS
GTTGTCACGAAGACAGGCAT+TGG 0.566651 tig0026775:-10478 Msa1431000:CDS
ATATAATAATTATTTATCGT+GGG 0.568217 tig0026775:-10542 Msa1431000:CDS
TCTTTGGAAGCTGAGAGTGG+TGG 0.568769 tig0026775:-10600 Msa1431000:CDS
GTTCCATGCGACACATCAAA+AGG 0.568788 tig0026775:+9676 None:intergenic
CTATACATCTAATGATAGGA+TGG 0.569547 tig0026775:-13266 Msa1431000:CDS
TGGAGTTGCTGGTATTACTC+AGG 0.570067 tig0026775:-14423 Msa1431000:CDS
CCGCGCTTCAAAGATTGGAC+AGG 0.571785 tig0026775:-13626 Msa1431000:CDS
TAGAAAACATGCATCTACAC+TGG 0.573476 tig0026775:-10692 Msa1431000:CDS
AGAAGACAAACCAGAACTAG+TGG 0.574074 tig0026775:-14774 Msa1431000:CDS
ATTCAGACTTCTTCCGTATG+GGG 0.575842 tig0026775:-13540 Msa1431000:CDS
AATCAGTTGGAAGGTCTGCT+GGG 0.575969 tig0026775:+10905 None:intergenic
ACATTCCTCGATATAACACT+AGG 0.578174 tig0026775:+13879 None:intergenic
TATCGCAATATGCTTAACTT+GGG 0.578620 tig0026775:+10623 None:intergenic
TTCGTGTAAGATTCTACGCA+AGG 0.581312 tig0026775:+13845 None:intergenic
GCGTTTATCTCCTTGGCACG+TGG 0.582500 tig0026775:-14696 Msa1431000:CDS
TGATCAGCATCAACAGGTAA+GGG 0.585666 tig0026775:+13596 None:intergenic
TGGTATTACTCAGGAATTGG+TGG 0.587892 tig0026775:-14414 Msa1431000:CDS
ATGTCTCCAAATCAGTTGGA+AGG 0.588053 tig0026775:+10896 None:intergenic
GAGGTCTTTCATGTCATCAT+GGG 0.588523 tig0026775:+10022 None:intergenic
ATCTGTAGACAAGGATACCA+AGG 0.589472 tig0026775:-10568 Msa1431000:CDS
TGGGTCTCATAACCTGTGGA+CGG 0.596006 tig0026775:+10508 None:intergenic
CTAGAGCTATAGTAAAGCTG+TGG 0.601734 tig0026775:-13333 Msa1431000:CDS
TAGAGCTATAGTAAAGCTGT+GGG 0.602614 tig0026775:-13332 Msa1431000:CDS
ATTCAGTGGATGTTGGGAGT+GGG 0.602998 tig0026775:-13790 Msa1431000:CDS
ATTTCCTTGTTGGATAAACA+AGG 0.603660 tig0026775:+13512 None:intergenic
AAGGTTCAGGAAGTCTGAGA+AGG 0.605613 tig0026775:-10956 Msa1431000:CDS
CCATACGGAAGAAGTCTGAA+TGG 0.606838 tig0026775:+13542 None:intergenic
TAGGATGGCCGAAGAACTCA+AGG 0.607091 tig0026775:-13251 Msa1431000:intron
GAATATATTGTAATTTACAG+GGG 0.614122 tig0026775:-11368 Msa1431000:CDS
GCAAGGGTTCCAGCAAGTAA+CGG 0.614542 tig0026775:+11206 None:intergenic
TGGTTGATGTCCCCAATTGG+CGG 0.616228 tig0026775:+11166 None:intergenic
TGTCATCATGGGAAGAAACA+TGG 0.616340 tig0026775:+10033 None:intergenic
ACACTGGAAATATCGCGAGT+TGG 0.619243 tig0026775:-10676 Msa1431000:CDS
ATGCGACACATCAAAAGGCA+TGG 0.620367 tig0026775:+9681 None:intergenic
AGGGCAGCAACCGCCAATTG+GGG 0.622870 tig0026775:-11176 Msa1431000:CDS
GACTGAGAAATATGGCGTTG+AGG 0.626272 tig0026775:-14466 Msa1431000:CDS
GACCCAACTCATCCAACAGA+AGG 0.627115 tig0026775:+13648 None:intergenic
ATAAGTGTGAAAGAAATGGT+TGG 0.627154 tig0026775:-13755 Msa1431000:CDS
AAGAGCTCATCAAATTCTCG+AGG 0.628328 tig0026775:-14315 Msa1431000:intron
TGCTGCCCTAGTCTCAGCAA+GGG 0.628919 tig0026775:+11190 None:intergenic
AGGAAATGACTGACATGCGT+AGG 0.633226 tig0026775:-13496 Msa1431000:CDS
AGATTTCTATCCAATGTCGT+AGG 0.634292 tig0026775:-9629 Msa1431000:three_prime_UTR
GTTTCTGAAGCAGAGAAACA+CGG 0.634932 tig0026775:-15182 Msa1431000:five_prime_UTR
AACTGTTCTCCAACAAGACG+AGG 0.635550 tig0026775:-11291 Msa1431000:CDS
CATTCCTCGATATAACACTA+GGG 0.644587 tig0026775:+13880 None:intergenic
GCGTAGGATTGCTAGAAGAA+CGG 0.645784 tig0026775:-13480 Msa1431000:CDS
GAAGAACTACTTCCGTCCAC+AGG 0.649230 tig0026775:-10520 Msa1431000:CDS
TAATGGTAAGGAGAATGCTG+TGG 0.650593 tig0026775:-13816 Msa1431000:CDS
TGCATACCAAGGGCAAAGTG+TGG 0.656479 tig0026775:+13455 None:intergenic
GAATGCTGTGGACAATTCAG+TGG 0.657859 tig0026775:-13804 Msa1431000:CDS
TGGCGTTGAGGATGGTGGAG+AGG 0.659099 tig0026775:-14454 Msa1431000:CDS
TTTGGAAGCTGAGAGTGGTG+GGG 0.660912 tig0026775:-10598 Msa1431000:CDS
CGGGTACAGCGAAATTCTGG+TGG 0.662432 tig0026775:-14602 Msa1431000:CDS
GGGAATAACTGAAAATGCAG+AGG 0.664240 tig0026775:+14995 None:intergenic
GAAACCTTGTTTATCCAACA+AGG 0.665865 tig0026775:-13516 Msa1431000:CDS
GGTGCTAGTATCTGTAGACA+AGG 0.666036 tig0026775:-10577 Msa1431000:CDS
GCATTTGCAGAAATTGACTG+GGG 0.670583 tig0026775:-11414 Msa1431000:intron
CTTAATCAGAGTAAAACTGG+AGG 0.676737 tig0026775:-13929 Msa1431000:intron
TCTGTAGACAAGGATACCAA+GGG 0.682121 tig0026775:-10567 Msa1431000:CDS
TATTGAGCTTCAAAGACGAG+AGG 0.684121 tig0026775:-10448 Msa1431000:intron
CCTGTCCAATCTTTGAAGCG+CGG 0.686187 tig0026775:+13626 None:intergenic
AGTTCCCTAGTGTTATATCG+AGG 0.691104 tig0026775:-13884 Msa1431000:CDS
CATTTGCAGAAATTGACTGG+GGG 0.692019 tig0026775:-11413 Msa1431000:intron
ATATCTTTGGAAGCTGAGAG+TGG 0.692298 tig0026775:-10603 Msa1431000:CDS
AAGGATTTAGCTAAAATACA+GGG 0.697797 tig0026775:-10937 Msa1431000:CDS
CTGAAGCAGAGAAACACGGA+AGG 0.703195 tig0026775:-15178 Msa1431000:five_prime_UTR
AAACTGGAGGTATTGTGGTG+TGG 0.705901 tig0026775:-13916 Msa1431000:CDS
GGAACAACCACAATCCCAAG+AGG 0.708063 tig0026775:-14753 Msa1431000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAAACAAAATTTTTTAT+GGG + tig0026775:13090-13109 None:intergenic 10.0%
!!! TAATCAAACAAAATTTTTTA+TGG + tig0026775:13091-13110 None:intergenic 10.0%
!! ATCTAACTTTATAAATTATA+TGG - tig0026775:13747-13766 Msa1431000:CDS 10.0%
!! TTTATAAATTATATGGTTAT+AGG - tig0026775:13754-13773 Msa1431000:CDS 10.0%
!! ATATAATAATTATTTATCGT+GGG - tig0026775:14198-14217 Msa1431000:intron 10.0%
!!! ACTGTTTAATTTAATTGTAT+TGG - tig0026775:11547-11566 Msa1431000:intron 15.0%
!! AATAGATAATATACTATTAC+AGG - tig0026775:12028-12047 Msa1431000:intron 15.0%
!!! TTATTAAATTTTTATGTCAG+TGG + tig0026775:12296-12315 None:intergenic 15.0%
!!! TAACTTTTTTTAATGAGTTT+TGG - tig0026775:13062-13081 Msa1431000:intron 15.0%
!!! AACTTTTTTTAATGAGTTTT+GGG - tig0026775:13063-13082 Msa1431000:intron 15.0%
!! TTTATAAAGTTAGATAGATA+TGG + tig0026775:13742-13761 None:intergenic 15.0%
!! CACGATAAATAATTATTATA+TGG + tig0026775:14199-14218 None:intergenic 15.0%
!! CATATAATAATTATTTATCG+TGG - tig0026775:14197-14216 Msa1431000:intron 15.0%
!!! TAAAGCAATAATTTCTTTTT+TGG - tig0026775:14318-14337 Msa1431000:CDS 15.0%
!!! ACTTTCTAATTTTTTTTTTC+AGG - tig0026775:14471-14490 Msa1431000:CDS 15.0%
!! ATATTGCTACTAAATATTAT+TGG + tig0026775:14811-14830 None:intergenic 15.0%
!! TTACTTATCTATATTCATCA+AGG - tig0026775:10479-10498 Msa1431000:CDS 20.0%
!!! GTAAAGAATAGTAAATCTTT+TGG + tig0026775:11352-11371 None:intergenic 20.0%
!!! TTTTTCTGTTGTAATAAACA+TGG + tig0026775:11965-11984 None:intergenic 20.0%
!!! GATAGTTTTCAAATGATTTT+GGG + tig0026775:12096-12115 None:intergenic 20.0%
!!! CAGTTATGTTGTTTAATTTT+AGG + tig0026775:12155-12174 None:intergenic 20.0%
!! AATGTGTTATACTTATGTTA+TGG + tig0026775:12211-12230 None:intergenic 20.0%
!! ATAAAAAGAGATAGAATCAT+GGG - tig0026775:12509-12528 Msa1431000:intron 20.0%
!! TCTTATGTATGATATAATGT+TGG + tig0026775:12540-12559 None:intergenic 20.0%
!! AAAAGAAAACGATAATTTCA+AGG + tig0026775:12770-12789 None:intergenic 20.0%
!!! TTTTCTTTTGTAACATTATC+AGG - tig0026775:12781-12800 Msa1431000:intron 20.0%
!!! TTTCTTTTGTAACATTATCA+GGG - tig0026775:12782-12801 Msa1431000:intron 20.0%
!!! AGTTTTTTGCAATTTAGAAA+GGG + tig0026775:12824-12843 None:intergenic 20.0%
!! AAAAAAGTTAGAACAATATG+AGG + tig0026775:13052-13071 None:intergenic 20.0%
!! AGGAATATATTGTAATTTAC+AGG - tig0026775:13370-13389 Msa1431000:intron 20.0%
!! GGAATATATTGTAATTTACA+GGG - tig0026775:13371-13390 Msa1431000:intron 20.0%
!! GAATATATTGTAATTTACAG+GGG - tig0026775:13372-13391 Msa1431000:intron 20.0%
!!! AATAATTTCTTTTTTGGTAG+TGG - tig0026775:14324-14343 Msa1431000:CDS 20.0%
!!! GTTCATGATTTTGATTTTAG+TGG - tig0026775:9589-9608 Msa1431000:three_prime_UTR 25.0%
!!! AGATAGTAGTGTTTTTTCAA+TGG - tig0026775:9615-9634 Msa1431000:three_prime_UTR 25.0%
!!! GATAGTAGTGTTTTTTCAAT+GGG - tig0026775:9616-9635 Msa1431000:three_prime_UTR 25.0%
! GAATTTGAAAATGTGGTTTA+GGG + tig0026775:9785-9804 None:intergenic 25.0%
! AAGACAAAGATAATGTGAAA+CGG - tig0026775:10118-10137 Msa1431000:intron 25.0%
! GTATTAGTAGTTTGAAGAAA+AGG - tig0026775:10199-10218 Msa1431000:intron 25.0%
! AGTAAACTGATAATATGAGA+GGG + tig0026775:10464-10483 None:intergenic 25.0%
! AAGTAAACTGATAATATGAG+AGG + tig0026775:10465-10484 None:intergenic 25.0%
!!! ATTAAGTTGATTGTCCAAAA+TGG - tig0026775:10683-10702 Msa1431000:CDS 25.0%
!!! TTAAGTTGATTGTCCAAAAT+GGG - tig0026775:10684-10703 Msa1431000:CDS 25.0%
! GTTCAAATATTCTCTGATAA+AGG + tig0026775:10755-10774 None:intergenic 25.0%
!! TCTTACACGAAAGTATATAA+TGG - tig0026775:10907-10926 Msa1431000:CDS 25.0%
! TGAAATAAGTGTGAAAGAAA+TGG - tig0026775:10981-11000 Msa1431000:intron 25.0%
! TCTCGATTAAAAGATTCAAT+AGG + tig0026775:11012-11031 None:intergenic 25.0%
! ATCCTATCATTAGATGTATA+GGG + tig0026775:11475-11494 None:intergenic 25.0%
!! TAATATTGTCCAATTTCTAG+CGG + tig0026775:11528-11547 None:intergenic 25.0%
!! GGAATTTTATCATGCTTAAA+AGG - tig0026775:11568-11587 Msa1431000:intron 25.0%
! TTCTTGTAAATGAGAATATC+AGG - tig0026775:11668-11687 Msa1431000:intron 25.0%
! TCTTGTAAATGAGAATATCA+GGG - tig0026775:11669-11688 Msa1431000:intron 25.0%
!! GCATTAGACAAAAGTATAAT+GGG + tig0026775:11714-11733 None:intergenic 25.0%
!! TGCATTAGACAAAAGTATAA+TGG + tig0026775:11715-11734 None:intergenic 25.0%
!! TTTTCATCTGAAAATAGCAA+AGG - tig0026775:11827-11846 Msa1431000:intron 25.0%
! ACATTTATCAGAAAATGAAG+TGG + tig0026775:11861-11880 None:intergenic 25.0%
! TCTACAGTTAAATCGTATTT+CGG + tig0026775:11921-11940 None:intergenic 25.0%
!!! TGTAGAAACTGTCTTTTTTA+TGG - tig0026775:11935-11954 Msa1431000:intron 25.0%
!! GGATAGTTTTCAAATGATTT+TGG + tig0026775:12097-12116 None:intergenic 25.0%
! TAATAAAAAATTCCAAGCAC+AGG - tig0026775:12310-12329 Msa1431000:intron 25.0%
!! ATAAGCATGATATATTTTCC+TGG - tig0026775:12356-12375 Msa1431000:intron 25.0%
!! TAAGCATGATATATTTTCCT+GGG - tig0026775:12357-12376 Msa1431000:intron 25.0%
! TTCTATGTGTAGAAAGAAAT+AGG - tig0026775:12393-12412 Msa1431000:intron 25.0%
! TCTATGTGTAGAAAGAAATA+GGG - tig0026775:12394-12413 Msa1431000:intron 25.0%
! ATGCTATTATGTTTATTCCT+TGG - tig0026775:12420-12439 Msa1431000:intron 25.0%
! GATAAAAAGAGATAGAATCA+TGG - tig0026775:12508-12527 Msa1431000:intron 25.0%
!!! GTTTTTTGCAATTTAGAAAG+GGG + tig0026775:12823-12842 None:intergenic 25.0%
!!! GAGTTTTTTGCAATTTAGAA+AGG + tig0026775:12825-12844 None:intergenic 25.0%
! TCTAAATTGCAAAAAACTCT+TGG - tig0026775:12826-12845 Msa1431000:intron 25.0%
!!! TCTTACAAGACTTTGAAATA+TGG + tig0026775:13179-13198 None:intergenic 25.0%
! TGTTCCTTTCTTTAAACTTA+TGG - tig0026775:13289-13308 Msa1431000:CDS 25.0%
! AACACCATAAGTTTAAAGAA+AGG + tig0026775:13296-13315 None:intergenic 25.0%
!! AACCTTACTTTCTAGAAATA+AGG - tig0026775:13350-13369 Msa1431000:CDS 25.0%
!!! TTCCTTATTTCTAGAAAGTA+AGG + tig0026775:13355-13374 None:intergenic 25.0%
! AAGGATTTAGCTAAAATACA+GGG - tig0026775:13803-13822 Msa1431000:CDS 25.0%
! TTGGTAAAAATACTTGTGAA+AGG - tig0026775:14083-14102 Msa1431000:intron 25.0%
! TGGTAAAAATACTTGTGAAA+GGG - tig0026775:14084-14103 Msa1431000:intron 25.0%
! AATAATTATTATATGGCCCT+TGG + tig0026775:14192-14211 None:intergenic 25.0%
!! TTACTCTGCTGTAATAATTT+TGG - tig0026775:14577-14596 Msa1431000:CDS 25.0%
!!! AGTTTTTTGTTGTTGATTTC+AGG - tig0026775:14622-14641 Msa1431000:CDS 25.0%
!!! TTTTTTCATAGACAAATACC+AGG - tig0026775:14748-14767 Msa1431000:CDS 25.0%
! GCTACTAAATATTATTGGTA+AGG + tig0026775:14806-14825 None:intergenic 25.0%
!! TTTTTCCAAAGAGAATAATG+GGG + tig0026775:14892-14911 None:intergenic 25.0%
!! GTTTTTCCAAAGAGAATAAT+GGG + tig0026775:14893-14912 None:intergenic 25.0%
!! AGTTTTTCCAAAGAGAATAA+TGG + tig0026775:14894-14913 None:intergenic 25.0%
!!! ATTCATTTTGATAAAGACGA+CGG - tig0026775:14930-14949 Msa1431000:CDS 25.0%
! ACTGAGAAGATAAACAATAA+TGG - tig0026775:15009-15028 Msa1431000:CDS 25.0%
! CTGAGAAGATAAACAATAAT+GGG - tig0026775:15010-15029 Msa1431000:CDS 25.0%
! TTTCACATGTTACATTACTT+GGG + tig0026775:15142-15161 None:intergenic 25.0%
! ATTTCACATGTTACATTACT+TGG + tig0026775:15143-15162 None:intergenic 25.0%
! AAGTAATGTAACATGTGAAA+TGG - tig0026775:15142-15161 Msa1431000:five_prime_UTR 25.0%
!!! GCTTTTTTTTGGTTTGATGA+TGG + tig0026775:9681-9700 None:intergenic 30.0%
AAATCAAAAATGGTTGCAAG+AGG + tig0026775:9703-9722 None:intergenic 30.0%
!!! TGCAACCATTTTTGATTTCA+TGG - tig0026775:9705-9724 Msa1431000:three_prime_UTR 30.0%
CGAATTTGAAAATGTGGTTT+AGG + tig0026775:9786-9805 None:intergenic 30.0%
AAAGTGCGAATTTGAAAATG+TGG + tig0026775:9792-9811 None:intergenic 30.0%
ACTCAAAATTAAGAGGTTGT+GGG + tig0026775:10017-10036 None:intergenic 30.0%
AACTCAAAATTAAGAGGTTG+TGG + tig0026775:10018-10037 None:intergenic 30.0%
CTTGGAAACTCAAAATTAAG+AGG + tig0026775:10024-10043 None:intergenic 30.0%
!!! CTCTTAATTTTGAGTTTCCA+AGG - tig0026775:10022-10041 Msa1431000:three_prime_UTR 30.0%
! CAGATTCTGAATCATTTTGT+GGG + tig0026775:10089-10108 None:intergenic 30.0%
! TCAGATTCTGAATCATTTTG+TGG + tig0026775:10090-10109 None:intergenic 30.0%
AGACAAAGATAATGTGAAAC+GGG - tig0026775:10119-10138 Msa1431000:intron 30.0%
AAGGAGAAGTAATACTGAAT+TGG - tig0026775:10218-10237 Msa1431000:CDS 30.0%
TGGATGCTATTCATGAAAAA+TGG - tig0026775:10346-10365 Msa1431000:intron 30.0%
TGCTATTCATGAAAAATGGA+TGG - tig0026775:10350-10369 Msa1431000:intron 30.0%
! CTTTTCATATTAGCAGAAAG+AGG + tig0026775:10408-10427 None:intergenic 30.0%
AATATTCTCTGATAAAGGAC+AGG + tig0026775:10750-10769 None:intergenic 30.0%
TTGCTTAATCAGAGTAAAAC+TGG - tig0026775:10808-10827 Msa1431000:intron 30.0%
! CACGAAAGTATATAATGGTA+AGG - tig0026775:10912-10931 Msa1431000:CDS 30.0%
ATAAGTGTGAAAGAAATGGT+TGG - tig0026775:10985-11004 Msa1431000:intron 30.0%
ATTTCCTTGTTGGATAAACA+AGG + tig0026775:11231-11250 None:intergenic 30.0%
TTCCCTATACATCTAATGAT+AGG - tig0026775:11470-11489 Msa1431000:intron 30.0%
CATCCTATCATTAGATGTAT+AGG + tig0026775:11476-11495 None:intergenic 30.0%
CTATACATCTAATGATAGGA+TGG - tig0026775:11474-11493 Msa1431000:intron 30.0%
CAATTGAAACATGAGCATAT+AGG - tig0026775:11736-11755 Msa1431000:intron 30.0%
GTTTCTAACACAATGAGAAA+AGG + tig0026775:11893-11912 None:intergenic 30.0%
TTTCTCATTGTGTTAGAAAC+AGG - tig0026775:11893-11912 Msa1431000:intron 30.0%
!! GTTTTCAAATGATTTTGGGA+GGG + tig0026775:12092-12111 None:intergenic 30.0%
! AGTTTTCAAATGATTTTGGG+AGG + tig0026775:12093-12112 None:intergenic 30.0%
GGAATAAATAGAGCAATGAA+AGG + tig0026775:12134-12153 None:intergenic 30.0%
AGAATATCGTTTATTTACCC+AGG + tig0026775:12377-12396 None:intergenic 30.0%
GTAATTGTGATCCAAAACAA+AGG + tig0026775:12748-12767 None:intergenic 30.0%
! TAATGCGATTTTCTACATGT+GGG + tig0026775:12914-12933 None:intergenic 30.0%
! ATAATGCGATTTTCTACATG+TGG + tig0026775:12915-12934 None:intergenic 30.0%
CATGTAGAAAATCGCATTAT+AGG - tig0026775:12915-12934 Msa1431000:intron 30.0%
TTATAGGTGGTCAATATTCA+CGG - tig0026775:12931-12950 Msa1431000:intron 30.0%
! TCACGGTTTGATAATATTCA+TGG - tig0026775:12948-12967 Msa1431000:intron 30.0%
! CACGGTTTGATAATATTCAT+GGG - tig0026775:12949-12968 Msa1431000:intron 30.0%
! TTTGTAGTATTCGTGCATTT+TGG - tig0026775:13143-13162 Msa1431000:intron 30.0%
!! TACAAGACTTTGAAATATGG+TGG + tig0026775:13176-13195 None:intergenic 30.0%
CTTGTTCATAATTTATCCTG+TGG - tig0026775:13246-13265 Msa1431000:intron 30.0%
AACCAAGTAAACAAGAAGTT+GGG - tig0026775:13592-13611 Msa1431000:CDS 30.0%
AATGATGAGAGAATCTACTT+TGG - tig0026775:13617-13636 Msa1431000:CDS 30.0%
TATGGTTATAGGCAAAAACA+AGG - tig0026775:13765-13784 Msa1431000:CDS 30.0%
GAAGGATTTAGCTAAAATAC+AGG - tig0026775:13802-13821 Msa1431000:CDS 30.0%
! ATGAAGAGAGATCTTTGTTT+AGG - tig0026775:13873-13892 Msa1431000:CDS 30.0%
! AGATCTTTGTTTAGGAAGAT+GGG - tig0026775:13881-13900 Msa1431000:CDS 30.0%
TTCTTACCTAGAAGTAAGTA+TGG + tig0026775:13920-13939 None:intergenic 30.0%
! ATGTTAAGCATGAGATTTTC+AGG - tig0026775:13999-14018 Msa1431000:intron 30.0%
TATCGCAATATGCTTAACTT+GGG + tig0026775:14120-14139 None:intergenic 30.0%
ATATCGCAATATGCTTAACT+TGG + tig0026775:14121-14140 None:intergenic 30.0%
TAAGCATATTGCGATATCTT+TGG - tig0026775:14124-14143 Msa1431000:intron 30.0%
!!! ATTTCTTTTTTGGTAGTGGT+CGG - tig0026775:14328-14347 Msa1431000:CDS 30.0%
GACAATGCATAAAATATGCA+AGG + tig0026775:14369-14388 None:intergenic 30.0%
!!! CTGCTGTAATAATTTTGGTT+AGG - tig0026775:14582-14601 Msa1431000:CDS 30.0%
!!! TTTTTGTTGTTGATTTCAGG+AGG - tig0026775:14625-14644 Msa1431000:CDS 30.0%
AGGAGGATATGAAAAATCAA+AGG - tig0026775:14642-14661 Msa1431000:CDS 30.0%
GGAGGATATGAAAAATCAAA+GGG - tig0026775:14643-14662 Msa1431000:CDS 30.0%
AAAAATCAAAGGGTGATTGA+TGG - tig0026775:14653-14672 Msa1431000:CDS 30.0%
!! TCTATGAAAAAAGAGTATCG+AGG + tig0026775:14740-14759 None:intergenic 30.0%
! ATAATGGGGGAAAAAATAAG+AGG + tig0026775:14878-14897 None:intergenic 30.0%
! TTTTCCAAAGAGAATAATGG+GGG + tig0026775:14891-14910 None:intergenic 30.0%
! CTTTGGAAAAACTAGAATGA+AGG - tig0026775:14901-14920 Msa1431000:CDS 30.0%
TTCACATGTTACATTACTTG+GGG + tig0026775:15141-15160 None:intergenic 30.0%
TTTCGGTATAAGAATGATGA+AGG - tig0026775:15185-15204 Msa1431000:five_prime_UTR 30.0%
!!! AGTAGTGTTTTTTCAATGGG+AGG - tig0026775:9619-9638 Msa1431000:three_prime_UTR 35.0%
TAGCGCCATGAAATCAAAAA+TGG + tig0026775:9713-9732 None:intergenic 35.0%
!! GAAAATGTGGTTTAGGGTTT+TGG + tig0026775:9779-9798 None:intergenic 35.0%
TTCCAATTCCAACCACAAAA+CGG - tig0026775:9816-9835 Msa1431000:three_prime_UTR 35.0%
CTGACCAAATTCGACATAAA+TGG - tig0026775:9881-9900 Msa1431000:intron 35.0%
TGTTTGGGAAGCTAATTTGA+GGG + tig0026775:9908-9927 None:intergenic 35.0%
! CCATGGGAATTTTTGTGTTT+GGG + tig0026775:9923-9942 None:intergenic 35.0%
!!! CATTTTGTGGGTGTTGTTTA+GGG + tig0026775:10077-10096 None:intergenic 35.0%
!!! TCATTTTGTGGGTGTTGTTT+AGG + tig0026775:10078-10097 None:intergenic 35.0%
! AAATTCTGGTGGTTCTGTTA+TGG - tig0026775:10149-10168 Msa1431000:intron 35.0%
GAGAAGTAATACTGAATTGG+CGG - tig0026775:10221-10240 Msa1431000:CDS 35.0%
CTTAATCAGAGTAAAACTGG+AGG - tig0026775:10811-10830 Msa1431000:intron 35.0%
CATTCCTCGATATAACACTA+GGG + tig0026775:10863-10882 None:intergenic 35.0%
ACATTCCTCGATATAACACT+AGG + tig0026775:10864-10883 None:intergenic 35.0%
! GAAACCTTGTTTATCCAACA+AGG - tig0026775:11224-11243 Msa1431000:CDS 35.0%
TTACTATTCTTTACTGCTGC+AGG - tig0026775:11358-11377 Msa1431000:CDS 35.0%
TAGAGCTATAGTAAAGCTGT+GGG - tig0026775:11408-11427 Msa1431000:intron 35.0%
GAGAAATACCTTGAGTTCTT+CGG + tig0026775:11500-11519 None:intergenic 35.0%
TCTCATAAACCGCTAGAAAT+TGG - tig0026775:11516-11535 Msa1431000:intron 35.0%
TATAAAACAACCCATCTGCT+TGG - tig0026775:11593-11612 Msa1431000:intron 35.0%
AGAATATCAGGGATGAGATT+AGG - tig0026775:11680-11699 Msa1431000:intron 35.0%
AACATGAGCATATAGGTAGA+TGG - tig0026775:11743-11762 Msa1431000:intron 35.0%
GTAAAGTGTATCTGACTATC+TGG - tig0026775:11795-11814 Msa1431000:intron 35.0%
CAGAATTCACACACAAACTA+AGG - tig0026775:12004-12023 Msa1431000:intron 35.0%
TGAAAGGAGAAAGTGACTAT+AGG + tig0026775:12118-12137 None:intergenic 35.0%
! AAGCGAGTTTAAAGCTTTCA+GGG - tig0026775:12249-12268 Msa1431000:intron 35.0%
TTCAGGGAATTGCCATAATT+AGG - tig0026775:12265-12284 Msa1431000:intron 35.0%
AATCAGATGACCTAAGTCAA+TGG - tig0026775:12675-12694 Msa1431000:intron 35.0%
ATGACCTAAGTCAATGGAAT+AGG - tig0026775:12681-12700 Msa1431000:intron 35.0%
!! AGTACCTATTCCATTGACTT+AGG + tig0026775:12688-12707 None:intergenic 35.0%
TGATTTCACACCAATAAGCA+CGG + tig0026775:12890-12909 None:intergenic 35.0%
GTAGAAAATCGCATTATAGG+TGG - tig0026775:12918-12937 Msa1431000:intron 35.0%
!! AAGTGATTTGCTGCAATTGA+AGG - tig0026775:12997-13016 Msa1431000:intron 35.0%
! ATAGCTGCAGTCAATCTTTT+GGG + tig0026775:13120-13139 None:intergenic 35.0%
! TATAGCTGCAGTCAATCTTT+TGG + tig0026775:13121-13140 None:intergenic 35.0%
CACTTGACACTTAAATGCTT+TGG - tig0026775:13215-13234 Msa1431000:intron 35.0%
ATTCACTTCAATATTGCCAC+AGG + tig0026775:13265-13284 None:intergenic 35.0%
ATGCATTTGCAGAAATTGAC+TGG - tig0026775:13324-13343 Msa1431000:CDS 35.0%
TGCATTTGCAGAAATTGACT+GGG - tig0026775:13325-13344 Msa1431000:CDS 35.0%
! TAGTTTTTGTCTCTCAGTCA+GGG + tig0026775:13430-13449 None:intergenic 35.0%
!! TTAGTTTTTGTCTCTCAGTC+AGG + tig0026775:13431-13450 None:intergenic 35.0%
CAACCAAGTAAACAAGAAGT+TGG - tig0026775:13591-13610 Msa1431000:CDS 35.0%
! TTCCCAACTTCTTGTTTACT+TGG + tig0026775:13597-13616 None:intergenic 35.0%
! CTTTCGGAAGTTATTTCAGT+TGG + tig0026775:13705-13724 None:intergenic 35.0%
GGTAACAACAGATAGTCTTT+CGG + tig0026775:13721-13740 None:intergenic 35.0%
TATAGGCAAAAACAAGGTTC+AGG - tig0026775:13771-13790 Msa1431000:CDS 35.0%
GTTAATGTCTCCAAATCAGT+TGG + tig0026775:13851-13870 None:intergenic 35.0%
! GAGATCTTTGTTTAGGAAGA+TGG - tig0026775:13880-13899 Msa1431000:CDS 35.0%
ATGAAGCCATACTTACTTCT+AGG - tig0026775:13911-13930 Msa1431000:CDS 35.0%
!!! TAAGCATGAGATTTTCAGGT+AGG - tig0026775:14003-14022 Msa1431000:intron 35.0%
! GTGTAGATGCATGTTTTCTA+TGG + tig0026775:14048-14067 None:intergenic 35.0%
TAGAAAACATGCATCTACAC+TGG - tig0026775:14048-14067 Msa1431000:intron 35.0%
!!! TTTCTTTTTTGGTAGTGGTC+GGG - tig0026775:14329-14348 Msa1431000:CDS 35.0%
CATAAAATATGCAAGGTCCA+GGG + tig0026775:14362-14381 None:intergenic 35.0%
ATTCAGTGTAGAGTAGAGTT+TGG + tig0026775:14682-14701 None:intergenic 35.0%
TGTAATAAATTGCAAGCACC+TGG + tig0026775:14769-14788 None:intergenic 35.0%
GGGAAAAAATAAGAGGAACA+AGG + tig0026775:14871-14890 None:intergenic 35.0%
! TTTTCCCCCATTATTCTCTT+TGG - tig0026775:14884-14903 Msa1431000:CDS 35.0%
AGATTTCTATCCAATGTCGT+AGG - tig0026775:15111-15130 Msa1431000:five_prime_UTR 35.0%
!! GTTTCTGAAGCAGAGAAACA+CGG - tig0026775:9558-9577 Msa1431000:three_prime_UTR 40.0%
!!! GGTTGCAAGAGGCTTTTTTT+TGG + tig0026775:9692-9711 None:intergenic 40.0%
GGGAATAACTGAAAATGCAG+AGG + tig0026775:9748-9767 None:intergenic 40.0%
!!! TGGTTTAGGGTTTTGGTTTG+GGG + tig0026775:9772-9791 None:intergenic 40.0%
!!! GTGGTTTAGGGTTTTGGTTT+GGG + tig0026775:9773-9792 None:intergenic 40.0%
!!! TGTGGTTTAGGGTTTTGGTT+TGG + tig0026775:9774-9793 None:intergenic 40.0%
!! TTTCAACTTGAGCCGTTTTG+TGG + tig0026775:9831-9850 None:intergenic 40.0%
CGAATTTGGTCAGAGAAACT+TGG + tig0026775:9874-9893 None:intergenic 40.0%
GGGACCATTTATGTCGAATT+TGG + tig0026775:9888-9907 None:intergenic 40.0%
GTGTTTGGGAAGCTAATTTG+AGG + tig0026775:9909-9928 None:intergenic 40.0%
CCCAAACACAAAAATTCCCA+TGG - tig0026775:9920-9939 Msa1431000:intron 40.0%
! GCCATGGGAATTTTTGTGTT+TGG + tig0026775:9924-9943 None:intergenic 40.0%
AGAAGACAAACCAGAACTAG+TGG - tig0026775:9966-9985 Msa1431000:intron 40.0%
GTTGCAGAGACTGAGAAATA+TGG - tig0026775:10266-10285 Msa1431000:intron 40.0%
TGCTGGTATTACTCAGGAAT+TGG - tig0026775:10323-10342 Msa1431000:intron 40.0%
TGGTATTACTCAGGAATTGG+TGG - tig0026775:10326-10345 Msa1431000:intron 40.0%
AAGAGCTCATCAAATTCTCG+AGG - tig0026775:10425-10444 Msa1431000:intron 40.0%
! TTGTGAGGTATGACCCATTT+TGG + tig0026775:10700-10719 None:intergenic 40.0%
!! GAGTAAAACTGGAGGTATTG+TGG - tig0026775:10819-10838 Msa1431000:intron 40.0%
AGTTCCCTAGTGTTATATCG+AGG - tig0026775:10856-10875 Msa1431000:CDS 40.0%
TTCGTGTAAGATTCTACGCA+AGG + tig0026775:10898-10917 None:intergenic 40.0%
TAATGGTAAGGAGAATGCTG+TGG - tig0026775:10924-10943 Msa1431000:CDS 40.0%
TGGACAATTCAGTGGATGTT+GGG - tig0026775:10944-10963 Msa1431000:CDS 40.0%
! AGACTCTGCAGAGTATTTGA+AGG - tig0026775:11029-11048 Msa1431000:intron 40.0%
CATGAGTGAAGAAGAATCGA+TGG - tig0026775:11053-11072 Msa1431000:intron 40.0%
AACCTTCTGTTGGATGAGTT+GGG - tig0026775:11090-11109 Msa1431000:CDS 40.0%
TGATCAGCATCAACAGGTAA+GGG + tig0026775:11147-11166 None:intergenic 40.0%
TTGATCAGCATCAACAGGTA+AGG + tig0026775:11148-11167 None:intergenic 40.0%
GGTAATTGATCAGCATCAAC+AGG + tig0026775:11153-11172 None:intergenic 40.0%
! CTGAATGGTGTTTTATACCC+TGG + tig0026775:11186-11205 None:intergenic 40.0%
CATTCAGACTTCTTCCGTAT+GGG - tig0026775:11199-11218 Msa1431000:CDS 40.0%
ATTCAGACTTCTTCCGTATG+GGG - tig0026775:11200-11219 Msa1431000:CDS 40.0%
AAACAAGGTTTCACCCCATA+CGG + tig0026775:11216-11235 None:intergenic 40.0%
CATGTCAGTCATTTCCTTGT+TGG + tig0026775:11241-11260 None:intergenic 40.0%
GGAAGAAGTAGAGAACTTCA+AGG - tig0026775:11379-11398 Msa1431000:CDS 40.0%
CTAGAGCTATAGTAAAGCTG+TGG - tig0026775:11407-11426 Msa1431000:CDS 40.0%
GCAAAAATAGCCATCAAACG+TGG - tig0026775:11445-11464 Msa1431000:intron 40.0%
! ACTCTTTTAGTCAACAGCCA+AGG + tig0026775:11625-11644 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG - tig0026775:12061-12080 Msa1431000:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG + tig0026775:12065-12084 None:intergenic 40.0%
ACTTATGTTATGGCCGTTGT+GGG + tig0026775:12201-12220 None:intergenic 40.0%
TACTTATGTTATGGCCGTTG+TGG + tig0026775:12202-12221 None:intergenic 40.0%
! CAAGCGAGTTTAAAGCTTTC+AGG - tig0026775:12248-12267 Msa1431000:intron 40.0%
TCAGTGGCATAGCCTAATTA+TGG + tig0026775:12280-12299 None:intergenic 40.0%
! TATGTTTATTCCTTGGCTCG+AGG - tig0026775:12427-12446 Msa1431000:intron 40.0%
TAAAATTTCACCTCGAGCCA+AGG + tig0026775:12440-12459 None:intergenic 40.0%
!! TTGGCTCGAGGTGAAATTTT+AGG - tig0026775:12439-12458 Msa1431000:intron 40.0%
TTTGTTAACCTTCCCTCAAG+TGG - tig0026775:12568-12587 Msa1431000:intron 40.0%
TTGTTAACCTTCCCTCAAGT+GGG - tig0026775:12569-12588 Msa1431000:intron 40.0%
AACTGATAACACCCACTTGA+GGG + tig0026775:12583-12602 None:intergenic 40.0%
ACTTACCATACCGTGCTTAT+TGG - tig0026775:12877-12896 Msa1431000:intron 40.0%
CAATTGCAGCAAATCACTTG+TGG + tig0026775:12996-13015 None:intergenic 40.0%
TTGAAGGATAAGCCTGAATG+TGG - tig0026775:13013-13032 Msa1431000:intron 40.0%
GCATTTGCAGAAATTGACTG+GGG - tig0026775:13326-13345 Msa1431000:CDS 40.0%
CATTTGCAGAAATTGACTGG+GGG - tig0026775:13327-13346 Msa1431000:CDS 40.0%
ATGTCTCCAAATCAGTTGGA+AGG + tig0026775:13847-13866 None:intergenic 40.0%
! AGCTTTATGCTTAGCTGCTT+TGG - tig0026775:13955-13974 Msa1431000:intron 40.0%
! ATATCTTTGGAAGCTGAGAG+TGG - tig0026775:14137-14156 Msa1431000:intron 40.0%
ATCTGTAGACAAGGATACCA+AGG - tig0026775:14172-14191 Msa1431000:intron 40.0%
TCTGTAGACAAGGATACCAA+GGG - tig0026775:14173-14192 Msa1431000:intron 40.0%
! CTTCGTGACAACAAGCTTTT+GGG + tig0026775:14254-14273 None:intergenic 40.0%
! TCTTCGTGACAACAAGCTTT+TGG + tig0026775:14255-14274 None:intergenic 40.0%
TATTGAGCTTCAAAGACGAG+AGG - tig0026775:14292-14311 Msa1431000:intron 40.0%
!!! TTCTTTTTTGGTAGTGGTCG+GGG - tig0026775:14330-14349 Msa1431000:CDS 40.0%
GCATAAAATATGCAAGGTCC+AGG + tig0026775:14363-14382 None:intergenic 40.0%
TGTCATCATGGGAAGAAACA+TGG + tig0026775:14710-14729 None:intergenic 40.0%
GAGGTCTTTCATGTCATCAT+GGG + tig0026775:14721-14740 None:intergenic 40.0%
!! CATTTTGATAAAGACGACGG+TGG - tig0026775:14933-14952 Msa1431000:CDS 40.0%
!!! TTAGGGTTTTGGTTTGGGGT+GGG + tig0026775:9768-9787 None:intergenic 45.0%
!!! TTTAGGGTTTTGGTTTGGGG+TGG + tig0026775:9769-9788 None:intergenic 45.0%
!! AGCCGTTTTGTGGTTGGAAT+TGG + tig0026775:9821-9840 None:intergenic 45.0%
!! AACTTGAGCCGTTTTGTGGT+TGG + tig0026775:9827-9846 None:intergenic 45.0%
! GTTGCTGTTGTTCTTGCCAT+GGG + tig0026775:9939-9958 None:intergenic 45.0%
! TGTTGCTGTTGTTCTTGCCA+TGG + tig0026775:9940-9959 None:intergenic 45.0%
TGTGGTTGTTCCACTAGTTC+TGG + tig0026775:9979-9998 None:intergenic 45.0%
! TTCCAAGGCGTTTATCTCCT+TGG - tig0026775:10037-10056 Msa1431000:three_prime_UTR 45.0%
AAACGGGTACAGCGAAATTC+TGG - tig0026775:10135-10154 Msa1431000:intron 45.0%
! ATTGGCGGAGAAGTTGATTC+CGG - tig0026775:10236-10255 Msa1431000:CDS 45.0%
AGTCTCTGCAACTCATGTTC+CGG + tig0026775:10258-10277 None:intergenic 45.0%
GACTGAGAAATATGGCGTTG+AGG - tig0026775:10274-10293 Msa1431000:intron 45.0%
! GAGAAATATGGCGTTGAGGA+TGG - tig0026775:10278-10297 Msa1431000:intron 45.0%
! AAATATGGCGTTGAGGATGG+TGG - tig0026775:10281-10300 Msa1431000:intron 45.0%
TGGAGTTGCTGGTATTACTC+AGG - tig0026775:10317-10336 Msa1431000:intron 45.0%
TCATACCTCACAATGCAGTG+TGG - tig0026775:10707-10726 Msa1431000:CDS 45.0%
!! AAACTGGAGGTATTGTGGTG+TGG - tig0026775:10824-10843 Msa1431000:intron 45.0%
GAATGCTGTGGACAATTCAG+TGG - tig0026775:10936-10955 Msa1431000:CDS 45.0%
GTGGACAATTCAGTGGATGT+TGG - tig0026775:10943-10962 Msa1431000:CDS 45.0%
AATTCAGTGGATGTTGGGAG+TGG - tig0026775:10949-10968 Msa1431000:CDS 45.0%
ATTCAGTGGATGTTGGGAGT+GGG - tig0026775:10950-10969 Msa1431000:CDS 45.0%
GATCGAACTCAACCTTCTGT+TGG - tig0026775:11080-11099 Msa1431000:CDS 45.0%
CAACCTTCTGTTGGATGAGT+TGG - tig0026775:11089-11108 Msa1431000:CDS 45.0%
TGCTGATCAATTACCTGCTG+TGG - tig0026775:11158-11177 Msa1431000:CDS 45.0%
AATTACCTGCTGTGGTTCCA+GGG - tig0026775:11166-11185 Msa1431000:CDS 45.0%
CCATACGGAAGAAGTCTGAA+TGG + tig0026775:11201-11220 None:intergenic 45.0%
CCATTCAGACTTCTTCCGTA+TGG - tig0026775:11198-11217 Msa1431000:CDS 45.0%
AGGAAATGACTGACATGCGT+AGG - tig0026775:11244-11263 Msa1431000:CDS 45.0%
GCGTAGGATTGCTAGAAGAA+CGG - tig0026775:11260-11279 Msa1431000:CDS 45.0%
GAGAGCTTCTTGCATACCAA+GGG + tig0026775:11298-11317 None:intergenic 45.0%
AGAGAGCTTCTTGCATACCA+AGG + tig0026775:11299-11318 None:intergenic 45.0%
ATAGGGAACTCCACGTTTGA+TGG + tig0026775:11458-11477 None:intergenic 45.0%
! CTTTTAGTCAACAGCCAAGG+AGG + tig0026775:11622-11641 None:intergenic 45.0%
TACCTAAAACCTGCCCACAA+CGG - tig0026775:12185-12204 Msa1431000:intron 45.0%
CAACTGATAACACCCACTTG+AGG + tig0026775:12584-12603 None:intergenic 45.0%
CAGAATGTGTGTGACTTTCG+TGG - tig0026775:12716-12735 Msa1431000:intron 45.0%
AGCACGGTATGGTAAGTTCA+AGG + tig0026775:12874-12893 None:intergenic 45.0%
TCACACCAATAAGCACGGTA+TGG + tig0026775:12885-12904 None:intergenic 45.0%
TTCATGGGAGTGAGTTGCTA+TGG - tig0026775:12964-12983 Msa1431000:intron 45.0%
TGCATGCAAGAACCACATTC+AGG + tig0026775:13028-13047 None:intergenic 45.0%
! TTGTCTCTCAGTCAGGGTTT+TGG + tig0026775:13424-13443 None:intergenic 45.0%
AACTGTTCTCCAACAAGACG+AGG - tig0026775:13449-13468 Msa1431000:intron 45.0%
CTTTCTCTTCCTCGTCTTGT+TGG + tig0026775:13461-13480 None:intergenic 45.0%
TCTCAAATGCCGTTACTTGC+TGG - tig0026775:13525-13544 Msa1431000:CDS 45.0%
! ACTTGGTTGATGTCCCCAAT+TGG + tig0026775:13580-13599 None:intergenic 45.0%
AAGGTTCAGGAAGTCTGAGA+AGG - tig0026775:13784-13803 Msa1431000:CDS 45.0%
AATCAGTTGGAAGGTCTGCT+GGG + tig0026775:13838-13857 None:intergenic 45.0%
AAATCAGTTGGAAGGTCTGC+TGG + tig0026775:13839-13858 None:intergenic 45.0%
AGCAGACCTTCCAACTGATT+TGG - tig0026775:13838-13857 Msa1431000:CDS 45.0%
!!! GCATGAGATTTTCAGGTAGG+CGG - tig0026775:14006-14025 Msa1431000:intron 45.0%
!!! CATGAGATTTTCAGGTAGGC+GGG - tig0026775:14007-14026 Msa1431000:intron 45.0%
ACACTGGAAATATCGCGAGT+TGG - tig0026775:14064-14083 Msa1431000:intron 45.0%
GGTGCTAGTATCTGTAGACA+AGG - tig0026775:14163-14182 Msa1431000:intron 45.0%
!! CTTTTGGGTCTCATAACCTG+TGG + tig0026775:14239-14258 None:intergenic 45.0%
!! AAGCTTGTTGTCACGAAGAC+AGG - tig0026775:14256-14275 Msa1431000:intron 45.0%
TGAGCTTAGCTCAGTTGGTT+GGG + tig0026775:14391-14410 None:intergenic 45.0%
CGAGGTCTTTCATGTCATCA+TGG + tig0026775:14722-14741 None:intergenic 45.0%
ATGCGACACATCAAAAGGCA+TGG + tig0026775:15062-15081 None:intergenic 45.0%
! ATGCCTTTTGATGTGTCGCA+TGG - tig0026775:15061-15080 Msa1431000:five_prime_UTR 45.0%
GTTCCATGCGACACATCAAA+AGG + tig0026775:15067-15086 None:intergenic 45.0%
! TTGGGGTATTCCTACGACAT+TGG + tig0026775:15124-15143 None:intergenic 45.0%
!! ATTTATGTAAATATTTATTT+CGG - tig0026775:15168-15187 Msa1431000:five_prime_UTR 5.0%
CTGAAGCAGAGAAACACGGA+AGG - tig0026775:9562-9581 Msa1431000:three_prime_UTR 50.0%
GGAACAACCACAATCCCAAG+AGG - tig0026775:9987-10006 Msa1431000:intron 50.0%
AGGTTGTGGGTGTTCCTCTT+GGG + tig0026775:10004-10023 None:intergenic 50.0%
TGCCAAGGAGATAAACGCCT+TGG + tig0026775:10042-10061 None:intergenic 50.0%
! ATGGTGGAGAGGTTCAGTGT+TGG - tig0026775:10297-10316 Msa1431000:intron 50.0%
! AGGTTCAGTGTTGGAGTTGC+TGG - tig0026775:10306-10325 Msa1431000:intron 50.0%
AGCAACCACACTGCATTGTG+AGG + tig0026775:10715-10734 None:intergenic 50.0%
! AGGTATTGTGGTGTGGCGAT+CGG - tig0026775:10831-10850 Msa1431000:CDS 50.0%
TTCTACGCAAGGCAGCTTGT+AGG + tig0026775:10887-10906 None:intergenic 50.0%
GACCCAACTCATCCAACAGA+AGG + tig0026775:11095-11114 None:intergenic 50.0%
!! CCTGTCCAATCTTTGAAGCG+CGG + tig0026775:11117-11136 None:intergenic 50.0%
CAATTACCTGCTGTGGTTCC+AGG - tig0026775:11165-11184 Msa1431000:CDS 50.0%
TTATACCCTGGAACCACAGC+AGG + tig0026775:11174-11193 None:intergenic 50.0%
TGCATACCAAGGGCAAAGTG+TGG + tig0026775:11288-11307 None:intergenic 50.0%
TAGGATGGCCGAAGAACTCA+AGG - tig0026775:11489-11508 Msa1431000:intron 50.0%
GCAGTCAACTTACCTGTGCT+TGG + tig0026775:12325-12344 None:intergenic 50.0%
GATAACACCCACTTGAGGGA+AGG + tig0026775:12579-12598 None:intergenic 50.0%
GCAAGGGTTCCAGCAAGTAA+CGG + tig0026775:13537-13556 None:intergenic 50.0%
TGGAACCCTTGCTGAGACTA+GGG - tig0026775:13545-13564 Msa1431000:CDS 50.0%
! TGGTTGATGTCCCCAATTGG+CGG + tig0026775:13577-13596 None:intergenic 50.0%
! TCTTTGGAAGCTGAGAGTGG+TGG - tig0026775:14140-14159 Msa1431000:intron 50.0%
! CTTTGGAAGCTGAGAGTGGT+GGG - tig0026775:14141-14160 Msa1431000:intron 50.0%
TTTGGAAGCTGAGAGTGGTG+GGG - tig0026775:14142-14161 Msa1431000:intron 50.0%
GAAGAACTACTTCCGTCCAC+AGG - tig0026775:14220-14239 Msa1431000:intron 50.0%
TGGGTCTCATAACCTGTGGA+CGG + tig0026775:14235-14254 None:intergenic 50.0%
GTTGTCACGAAGACAGGCAT+TGG - tig0026775:14262-14281 Msa1431000:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG + tig0026775:14392-14411 None:intergenic 50.0%
GGGTGTTCCTCTTGGGATTG+TGG + tig0026775:9997-10016 None:intergenic 55.0%
GAGGTTGTGGGTGTTCCTCT+TGG + tig0026775:10005-10024 None:intergenic 55.0%
GCGTTTATCTCCTTGGCACG+TGG - tig0026775:10044-10063 Msa1431000:exon 55.0%
CGGGTACAGCGAAATTCTGG+TGG - tig0026775:10138-10157 Msa1431000:intron 55.0%
GGTATTGTGGTGTGGCGATC+GGG - tig0026775:10832-10851 Msa1431000:CDS 55.0%
TGGGTCCGCGCTTCAAAGAT+TGG - tig0026775:11109-11128 Msa1431000:CDS 55.0%
CCGCGCTTCAAAGATTGGAC+AGG - tig0026775:11114-11133 Msa1431000:CDS 55.0%
AAGGAGGTCGCCAAGCAGAT+GGG + tig0026775:11606-11625 None:intergenic 55.0%
ATGTTATGGCCGTTGTGGGC+AGG + tig0026775:12197-12216 None:intergenic 55.0%
!! CGTGGCGTCTGCCTTTGTTT+TGG - tig0026775:12734-12753 Msa1431000:intron 55.0%
!! AGGGTTTTGGTGACAGCAGG+AGG + tig0026775:13411-13430 None:intergenic 55.0%
!! GTCAGGGTTTTGGTGACAGC+AGG + tig0026775:13414-13433 None:intergenic 55.0%
CTGGAACCCTTGCTGAGACT+AGG - tig0026775:13544-13563 Msa1431000:CDS 55.0%
TGCTGCCCTAGTCTCAGCAA+GGG + tig0026775:13553-13572 None:intergenic 55.0%
TTGCTGCCCTAGTCTCAGCA+AGG + tig0026775:13554-13573 None:intergenic 55.0%
TAGGGCAGCAACCGCCAATT+GGG - tig0026775:13563-13582 Msa1431000:CDS 55.0%
GGTAGGCGGGATGTTTATGC+TGG - tig0026775:14020-14039 Msa1431000:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + tig0026775:14396-14415 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - tig0026775:14393-14412 Msa1431000:CDS 55.0%
! GGGTTTTCTGCCACGTGCCA+AGG + tig0026775:10057-10076 None:intergenic 60.0%
!! TGGCGTTGAGGATGGTGGAG+AGG - tig0026775:10286-10305 Msa1431000:intron 60.0%
CAAGGAGGTCGCCAAGCAGA+TGG + tig0026775:11607-11626 None:intergenic 60.0%
CATCTGCTTGGCGACCTCCT+TGG - tig0026775:11605-11624 Msa1431000:intron 60.0%
! GGCCGTTGTGGGCAGGTTTT+AGG + tig0026775:12190-12209 None:intergenic 60.0%
CTAGGGCAGCAACCGCCAAT+TGG - tig0026775:13562-13581 Msa1431000:CDS 60.0%
AGGGCAGCAACCGCCAATTG+GGG - tig0026775:13564-13583 Msa1431000:CDS 60.0%
AGTGGTCGGGGTTTGAACCC+TGG - tig0026775:14342-14361 Msa1431000:CDS 60.0%
ACGGCGCCACACTTTGCCCT+TGG - tig0026775:11279-11298 Msa1431000:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0026775 gene 9513 15249 9513 ID=Msa1431000;Name=Msa1431000
tig0026775 mRNA 9513 15249 9513 ID=Msa1431000-mRNA-1;Parent=Msa1431000;Name=Msa1431000-mRNA-1;_AED=0.09;_eAED=0.09;_QI=211|1|1|1|0.87|0.77|9|400|751
tig0026775 exon 9513 9846 9513 ID=Msa1431000-mRNA-1:exon:7348;Parent=Msa1431000-mRNA-1
tig0026775 exon 9993 10118 9993 ID=Msa1431000-mRNA-1:exon:7347;Parent=Msa1431000-mRNA-1
tig0026775 exon 10210 10269 10210 ID=Msa1431000-mRNA-1:exon:7346;Parent=Msa1431000-mRNA-1
tig0026775 exon 10449 10741 10449 ID=Msa1431000-mRNA-1:exon:7345;Parent=Msa1431000-mRNA-1
tig0026775 exon 10830 10986 10830 ID=Msa1431000-mRNA-1:exon:7344;Parent=Msa1431000-mRNA-1
tig0026775 exon 11076 11426 11076 ID=Msa1431000-mRNA-1:exon:7343;Parent=Msa1431000-mRNA-1
tig0026775 exon 13252 13382 13252 ID=Msa1431000-mRNA-1:exon:7342;Parent=Msa1431000-mRNA-1
tig0026775 exon 13462 13942 13462 ID=Msa1431000-mRNA-1:exon:7341;Parent=Msa1431000-mRNA-1
tig0026775 exon 14316 15249 14316 ID=Msa1431000-mRNA-1:exon:7340;Parent=Msa1431000-mRNA-1
tig0026775 five_prime_UTR 15039 15249 15039 ID=Msa1431000-mRNA-1:five_prime_utr;Parent=Msa1431000-mRNA-1
tig0026775 CDS 14316 15038 14316 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 13462 13942 13462 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 13252 13382 13252 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 11076 11426 11076 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 10830 10986 10830 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 10449 10741 10449 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 10210 10269 10210 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 CDS 10059 10118 10059 ID=Msa1431000-mRNA-1:cds;Parent=Msa1431000-mRNA-1
tig0026775 three_prime_UTR 9993 10058 9993 ID=Msa1431000-mRNA-1:three_prime_utr;Parent=Msa1431000-mRNA-1
tig0026775 three_prime_UTR 9513 9846 9513 ID=Msa1431000-mRNA-1:three_prime_utr;Parent=Msa1431000-mRNA-1
Gene Sequence

>Msa1431000

ATGGCGCTACAACAAATCTCTCCTCTGCATTTTCAGTTATTCCCACCCCAAACCAAAACCCTAAACCACATTTTCAAATTCGCACTTTCTTGTTCCAATTCCAACCACAAAACGGCTCAAGTTGAAATTAAGAAGAAAAAACACAGACCAAGTTTCTCTGACCAAATTCGACATAAATGGTCCCTCAAATTAGCTTCCCAAACACAAAAATTCCCATGGCAAGAACAACAGCAACAACAACAAGAAGACAAACCAGAACTAGTGGAACAACCACAATCCCAAGAGGAACACCCACAACCTCTTAATTTTGAGTTTCCAAGGCGTTTATCTCCTTGGCACGTGGCAGAAAACCCTAAACAACACCCACAAAATGATTCAGAATCTGATGCTTCTGAAGACAAAGATAATGTGAAACGGGTACAGCGAAATTCTGGTGGTTCTGTTATGGAAAGAGAGTTTGAAGAATCAGAAAGTAGTATTAGTAGTTTGAAGAAAAGGAGAAGTAATACTGAATTGGCGGAGAAGTTGATTCCGGAACATGAGTTGCAGAGACTGAGAAATATGGCGTTGAGGATGGTGGAGAGGTTCAGTGTTGGAGTTGCTGGTATTACTCAGGAATTGGTGGATGCTATTCATGAAAAATGGATGGTTGATGAAGTTGTTAAGTTTAAGTTTGATTCTCCTCTTTCTGCTAATATGAAAAGAGCTCATCAAATTCTCGAGAGTAAAACTGGAGGTATTGTGGTGTGGCGATCGGGAAGTTCCCTAGTGTTATATCGAGGAATGTCCTACAAGCTGCCTTGCGTAGAATCTTACACGAAAGTATATAATGGTAAGGAGAATGCTGTGGACAATTCAGTGGATGTTGGGAGTGGGAGAAGTGCTGAAATAAGTGTGAAAGAAATGGTTGGACCTATTGAATCTTTTAATCGAGACTCTGCAGAGTATTTGAAGGACATGAGTGAAGAAGAATCGATGGAATTGATCGAACTCAACCTTCTGTTGGATGAGTTGGGTCCGCGCTTCAAAGATTGGACAGGACGTGAGCCCTTACCTGTTGATGCTGATCAATTACCTGCTGTGGTTCCAGGGTATAAAACACCATTCAGACTTCTTCCGTATGGGGTGAAACCTTGTTTATCCAACAAGGAAATGACTGACATGCGTAGGATTGCTAGAAGAACGGCGCCACACTTTGCCCTTGGAAGAAGTAGAGAACTTCAAGGTCTAGCTAGAGCTATAGTAAAGCTGTGGGAAACAAGCGCTATTGCAAAAATAGCCATCAAACGTGGAGTTCCCTATACATCTAATGATAGGATGGCCGAAGAACTCAAGAAATTGACTGGGGGAACCTTACTTTCTAGAAATAAGGAATATATTGTAATTTACAGGGGAAATGACTTCTTGCCTCCTGCTGTCACCAAAACCCTGACTGAGAGACAAAAACTAACTGTTCTCCAACAAGACGAGGAAGAGAAAGCACGTCAAAATGCTTCATCGATTACTTTATCAAATAGCAAATCATCTCAAATGCCGTTACTTGCTGGAACCCTTGCTGAGACTAGGGCAGCAACCGCCAATTGGGGACATCAACCAAGTAAACAAGAAGTTGGGAAAATGATGAGAGAATCTACTTTGGATAGACTTTCTTCTTTAATCAGAAATCATGAGAGTAAACTAGCTCTAGCAAAAACAAGGTTCAGGAAGTCTGAGAAGGATTTAGCTAAAATACAGGGTGATTTTGACCCAGCAGACCTTCCAACTGATTTGGAGACATTAACTAATGAAGAGAGATCTTTGTTTAGGAAGATGGGTCTGAGTATGAAGCCATACTTACTTCTAGGTAGGCGGGATGTTTATGCTGGCACCATAGAAAACATGCATCTACACTGGAAATATCGCGAGTTGGTAAAAATACTTGTGAAAGGGAAAAATTTAGCCCAAGTTAAGCATATTGCGATATCTTTGGAAGCTGAGAGTGGTGGGGTGCTAGTATCTGTAGACAAGGATACCAAGGGCCATATAATAATTATTTATCGTGGGAAGAACTACTTCCGTCCACAGGTTATGAGACCCAAAAGCTTGTTGTCACGAAGACAGGCATTGGCTCGATCTATTGAGCTTCAAAGACGAGAGGCACTAAAACACCATATATCAGATTTACAGGAGATGATTGAGTTGCTCAAATCTGAGCTAGAGGATATGAAAAATCAAAGGGTGATTGATGGTGACCAAACTCTACTCTACACTGAATAA
Protein sequence

>Msa1431000

MALQQISPLHFQLFPPQTKTLNHIFKFALSCSNSNHKTAQVEIKKKKHRPSFSDQIRHKWSLKLASQTQKFPWQEQQQQQQEDKPELVEQPQSQEEHPQPLNFEFPRRLSPWHVAENPKQHPQNDSESDASEDKDNVKRVQRNSGGSVMEREFEESESSISSLKKRRSNTELAEKLIPEHELQRLRNMALRMVERFSVGVAGITQELVDAIHEKWMVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSLVLYRGMSYKLPCVESYTKVYNGKENAVDNSVDVGSGRSAEISVKEMVGPIESFNRDSAEYLKDMSEEESMELIELNLLLDELGPRFKDWTGREPLPVDADQLPAVVPGYKTPFRLLPYGVKPCLSNKEMTDMRRIARRTAPHFALGRSRELQGLARAIVKLWETSAIAKIAIKRGVPYTSNDRMAEELKKLTGGTLLSRNKEYIVIYRGNDFLPPAVTKTLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMPLLAGTLAETRAATANWGHQPSKQEVGKMMRESTLDRLSSLIRNHESKLALAKTRFRKSEKDLAKIQGDFDPADLPTDLETLTNEERSLFRKMGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKILVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGHIIIIYRGKNYFRPQVMRPKSLLSRRQALARSIELQRREALKHHISDLQEMIELLKSELEDMKNQRVIDGDQTLLYTE*