AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0877250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0877250 MtrunA17_Chr3g0110041 89.130 46 5 0 24 69 259 304 3.86e-21 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 36 sgRNAs with CRISPR-Local

Find 826 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTGTTCTGTGCAATTTC+AGG 0.150585 6_1:+16421291 Msa0877250:CDS
TAACTGCCTGTCATGCTTTA+AGG 0.171946 6_1:+16423143 Msa0877250:three_prime_UTR
CAAAGTTGTTACCCTTAATT+TGG 0.237076 6_1:-16423687 None:intergenic
AGAAGTTAATGACCAAATTA+AGG 0.238374 6_1:+16423675 Msa0877250:three_prime_UTR
ATATGCACTGCTTGGATTAT+AGG 0.290352 6_1:+16423516 Msa0877250:three_prime_UTR
TGGTAGTGGGCATGCGTTAT+GGG 0.313102 6_1:+16423476 Msa0877250:three_prime_UTR
TATACCTTCAAGTTATTAGA+AGG 0.322343 6_1:+16424074 Msa0877250:three_prime_UTR
TTATTAGAAGGTTAACCTAT+TGG 0.344211 6_1:+16424086 Msa0877250:three_prime_UTR
TTGGTAGTGGGCATGCGTTA+TGG 0.344239 6_1:+16423475 Msa0877250:three_prime_UTR
AGATAGTTATATGTTTCTAA+TGG 0.350766 6_1:+16424137 Msa0877250:three_prime_UTR
GTGGGCATGCGTTATGGGGC+TGG 0.368171 6_1:+16423481 Msa0877250:three_prime_UTR
CAGTTACGACATATTTGTTA+TGG 0.370458 6_1:-16423126 None:intergenic
GACAGTTATGAAAATGTTGA+AGG 0.401363 6_1:+16422889 Msa0877250:CDS
GGCATGGAATTTATTGGTAG+TGG 0.417211 6_1:+16423462 Msa0877250:three_prime_UTR
AGTATTATCAATCATCCAAT+AGG 0.418768 6_1:-16424101 None:intergenic
TTAGACAAATCAACAATTGT+TGG 0.426097 6_1:+16423969 Msa0877250:three_prime_UTR
TAGCGAGCTTGTTTCTCTAC+TGG 0.440208 6_1:+16423426 Msa0877250:intron
TTAACCTTCTAATAACTTGA+AGG 0.442772 6_1:-16424078 None:intergenic
GAAGTTAATGACCAAATTAA+GGG 0.448734 6_1:+16423676 Msa0877250:three_prime_UTR
CTAATAACTTCCTCGAGTCT+TGG 0.470165 6_1:-16424020 None:intergenic
GAACTATCCTCATGCTCCGC+TGG 0.496783 6_1:+16423168 Msa0877250:three_prime_UTR
GTTCTTCCTTAAAGCATGAC+AGG 0.503212 6_1:-16423149 None:intergenic
GCATGGAATTTATTGGTAGT+GGG 0.522746 6_1:+16423463 Msa0877250:three_prime_UTR
TGCGTTATGGGGCTGGTGTG+AGG 0.523738 6_1:+16423488 Msa0877250:three_prime_UTR
TATGGGGCTGGTGTGAGGCA+TGG 0.529105 6_1:+16423493 Msa0877250:three_prime_UTR
ATAACTTCCTCGAGTCTTGG+CGG 0.530505 6_1:-16424017 None:intergenic
TTAGATCGATTGAACTGAGA+AGG 0.541420 6_1:-16421255 None:intergenic
TCAACAATTGTTGGTGTACG+TGG 0.543817 6_1:+16423978 Msa0877250:three_prime_UTR
AGGCATGGATATGCACTGCT+TGG 0.562799 6_1:+16423508 Msa0877250:three_prime_UTR
ACAGGAGCTGAAGTAGAGAA+AGG 0.563721 6_1:+16423627 Msa0877250:intron
TCTTCAAGACGGAGAAGACA+AGG 0.601180 6_1:+16422970 Msa0877250:CDS
TTCAGCACCGCCAAGACTCG+AGG 0.615879 6_1:+16424010 Msa0877250:three_prime_UTR
GGTAGTGGGCATGCGTTATG+GGG 0.619529 6_1:+16423477 Msa0877250:three_prime_UTR
GCAATTACCAGCGGAGCATG+AGG 0.621151 6_1:-16423175 None:intergenic
ATTTGTCTAAGAAATATCCA+AGG 0.624404 6_1:-16423956 None:intergenic
GAAATTGCACAGAACAGTGA+AGG 0.639054 6_1:-16421288 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTATATATAATTT+TGG + chr6_1:16419561-16419580 Msa0877250:intron 0.0%
!!! TTTAATTTATATATAATTTT+GGG + chr6_1:16419562-16419581 Msa0877250:intron 0.0%
!!! TTTTAATTTATATATAATTT+TGG + chr6_1:16419561-16419580 Msa0877250:intron 0.0%
!!! TTTAATTTATATATAATTTT+GGG + chr6_1:16419562-16419581 Msa0877250:intron 0.0%
!!! AAAGTATTTGATAATTTTTT+GGG - chr6_1:16417089-16417108 None:intergenic 10.0%
!!! AAAAGTATTTGATAATTTTT+TGG - chr6_1:16417090-16417109 None:intergenic 10.0%
!!! TTATACGATAATATTTTATA+TGG + chr6_1:16417831-16417850 Msa0877250:intron 10.0%
!!! AAATGACAATATTTTAAAAA+CGG - chr6_1:16418324-16418343 None:intergenic 10.0%
!! TATACAAAACAATAAAATAT+AGG - chr6_1:16418635-16418654 None:intergenic 10.0%
!!! TATGTTTTTTTTAATGAAAT+GGG + chr6_1:16421609-16421628 Msa0877250:intron 10.0%
!! TATAATTTATAACTAATACT+AGG + chr6_1:16422259-16422278 Msa0877250:intron 10.0%
!! TTGTTCAAAAAAAAAAATTA+AGG - chr6_1:16422329-16422348 None:intergenic 10.0%
!! AAGTTCATATAATTAAATTA+AGG - chr6_1:16422360-16422379 None:intergenic 10.0%
!!! TTTTGTTTAAAAAATACTAA+AGG - chr6_1:16422423-16422442 None:intergenic 10.0%
!!! AAAGTATTTGATAATTTTTT+GGG - chr6_1:16417089-16417108 None:intergenic 10.0%
!!! AAAAGTATTTGATAATTTTT+TGG - chr6_1:16417090-16417109 None:intergenic 10.0%
!!! TTATACGATAATATTTTATA+TGG + chr6_1:16417831-16417850 Msa0877250:intron 10.0%
!!! AAATGACAATATTTTAAAAA+CGG - chr6_1:16418324-16418343 None:intergenic 10.0%
!! TATACAAAACAATAAAATAT+AGG - chr6_1:16418635-16418654 None:intergenic 10.0%
!!! TATGTTTTTTTTAATGAAAT+GGG + chr6_1:16421609-16421628 Msa0877250:intron 10.0%
!! TATAATTTATAACTAATACT+AGG + chr6_1:16422259-16422278 Msa0877250:intron 10.0%
!! TTGTTCAAAAAAAAAAATTA+AGG - chr6_1:16422329-16422348 None:intergenic 10.0%
!! AAGTTCATATAATTAAATTA+AGG - chr6_1:16422360-16422379 None:intergenic 10.0%
!!! TTTTGTTTAAAAAATACTAA+AGG - chr6_1:16422423-16422442 None:intergenic 10.0%
!!! CTCTTTGAAAAATATAAATA+TGG - chr6_1:16416867-16416886 None:intergenic 15.0%
!! CAACAATATAATATGATTAT+AGG + chr6_1:16416938-16416957 Msa0877250:intron 15.0%
!! ATTATAGGAAAAATTGTTTA+AGG + chr6_1:16416953-16416972 Msa0877250:intron 15.0%
!! TTATAGGAAAAATTGTTTAA+GGG + chr6_1:16416954-16416973 Msa0877250:intron 15.0%
!! ATACTATATATAGAGATAAT+GGG - chr6_1:16417017-16417036 None:intergenic 15.0%
!! TATACTATATATAGAGATAA+TGG - chr6_1:16417018-16417037 None:intergenic 15.0%
!!! ATGATAAACTTTTTAATGAT+TGG + chr6_1:16417173-16417192 Msa0877250:intron 15.0%
!! AATGTTAATTGTCTTAATTA+AGG - chr6_1:16417544-16417563 None:intergenic 15.0%
!! ATTGAATAATAATTGTATGA+TGG - chr6_1:16417586-16417605 None:intergenic 15.0%
!! TTATATTGAAAATTGTATCA+AGG - chr6_1:16417643-16417662 None:intergenic 15.0%
!! ATATTATCGTATAATTTCTT+AGG - chr6_1:16417825-16417844 None:intergenic 15.0%
!! GAATATCAAGATAATAAATA+AGG - chr6_1:16418299-16418318 None:intergenic 15.0%
!!! TTGATTTCCATTTATATTTT+TGG + chr6_1:16418808-16418827 Msa0877250:intron 15.0%
!!! TTATTTGTTGTTGTAAATAA+TGG - chr6_1:16419189-16419208 None:intergenic 15.0%
!!! ATCGAATTAATAATTGTTTT+GGG + chr6_1:16419251-16419270 Msa0877250:intron 15.0%
!!! ATTTATATATAATTTTGGGA+CGG + chr6_1:16419566-16419585 Msa0877250:intron 15.0%
!! TACGCTAAAATATATTTATT+TGG - chr6_1:16420566-16420585 None:intergenic 15.0%
!!! AGTTCTATAATTGATTTTAT+TGG - chr6_1:16420822-16420841 None:intergenic 15.0%
!!! TGTAATTGTTTAATTTAAGT+GGG - chr6_1:16420956-16420975 None:intergenic 15.0%
!!! ATGTAATTGTTTAATTTAAG+TGG - chr6_1:16420957-16420976 None:intergenic 15.0%
!!! ATTTTTTGATTTTGATGAAA+TGG + chr6_1:16421400-16421419 Msa0877250:intron 15.0%
!!! TTTTTTGATTTTGATGAAAT+GGG + chr6_1:16421401-16421420 Msa0877250:intron 15.0%
!!! TTTGTTGAAATTTTGATATT+TGG + chr6_1:16421424-16421443 Msa0877250:intron 15.0%
!!! GTATGTTTTTTTTAATGAAA+TGG + chr6_1:16421608-16421627 Msa0877250:intron 15.0%
!! ATTATGTTATCATATCAATT+AGG + chr6_1:16422491-16422510 Msa0877250:intron 15.0%
!!! ATCAATTTTGTTTGAAATTA+TGG + chr6_1:16423047-16423066 Msa0877250:intron 15.0%
!! CATAAAAATTGTTTAGTTAA+TGG - chr6_1:16423735-16423754 None:intergenic 15.0%
!!! CTCTTTGAAAAATATAAATA+TGG - chr6_1:16416867-16416886 None:intergenic 15.0%
!! CAACAATATAATATGATTAT+AGG + chr6_1:16416938-16416957 Msa0877250:intron 15.0%
!! ATTATAGGAAAAATTGTTTA+AGG + chr6_1:16416953-16416972 Msa0877250:intron 15.0%
!! TTATAGGAAAAATTGTTTAA+GGG + chr6_1:16416954-16416973 Msa0877250:intron 15.0%
!! ATACTATATATAGAGATAAT+GGG - chr6_1:16417017-16417036 None:intergenic 15.0%
!! TATACTATATATAGAGATAA+TGG - chr6_1:16417018-16417037 None:intergenic 15.0%
!!! ATGATAAACTTTTTAATGAT+TGG + chr6_1:16417173-16417192 Msa0877250:intron 15.0%
!! AATGTTAATTGTCTTAATTA+AGG - chr6_1:16417544-16417563 None:intergenic 15.0%
!! ATTGAATAATAATTGTATGA+TGG - chr6_1:16417586-16417605 None:intergenic 15.0%
!! TTATATTGAAAATTGTATCA+AGG - chr6_1:16417643-16417662 None:intergenic 15.0%
!! ATATTATCGTATAATTTCTT+AGG - chr6_1:16417825-16417844 None:intergenic 15.0%
!! GAATATCAAGATAATAAATA+AGG - chr6_1:16418299-16418318 None:intergenic 15.0%
!!! TTGATTTCCATTTATATTTT+TGG + chr6_1:16418808-16418827 Msa0877250:intron 15.0%
!!! TTATTTGTTGTTGTAAATAA+TGG - chr6_1:16419189-16419208 None:intergenic 15.0%
!!! ATCGAATTAATAATTGTTTT+GGG + chr6_1:16419251-16419270 Msa0877250:intron 15.0%
!!! ATTTATATATAATTTTGGGA+CGG + chr6_1:16419566-16419585 Msa0877250:intron 15.0%
!! TACGCTAAAATATATTTATT+TGG - chr6_1:16420566-16420585 None:intergenic 15.0%
!!! AGTTCTATAATTGATTTTAT+TGG - chr6_1:16420822-16420841 None:intergenic 15.0%
!!! TGTAATTGTTTAATTTAAGT+GGG - chr6_1:16420956-16420975 None:intergenic 15.0%
!!! ATGTAATTGTTTAATTTAAG+TGG - chr6_1:16420957-16420976 None:intergenic 15.0%
!!! ATTTTTTGATTTTGATGAAA+TGG + chr6_1:16421400-16421419 Msa0877250:intron 15.0%
!!! TTTTTTGATTTTGATGAAAT+GGG + chr6_1:16421401-16421420 Msa0877250:intron 15.0%
!!! TTTGTTGAAATTTTGATATT+TGG + chr6_1:16421424-16421443 Msa0877250:intron 15.0%
!!! GTATGTTTTTTTTAATGAAA+TGG + chr6_1:16421608-16421627 Msa0877250:intron 15.0%
!! ATTATGTTATCATATCAATT+AGG + chr6_1:16422491-16422510 Msa0877250:intron 15.0%
!!! ATCAATTTTGTTTGAAATTA+TGG + chr6_1:16423047-16423066 Msa0877250:intron 15.0%
!! CATAAAAATTGTTTAGTTAA+TGG - chr6_1:16423735-16423754 None:intergenic 15.0%
!! TACTATATATAGAGATAATG+GGG - chr6_1:16417016-16417035 None:intergenic 20.0%
!! TCTCAACTAAACTTATATAT+TGG + chr6_1:16417060-16417079 Msa0877250:intron 20.0%
!! TGTATCTTGAAATTTAATGT+TGG - chr6_1:16417443-16417462 None:intergenic 20.0%
!!! ATTTTATTATTGAACTTGCA+TGG - chr6_1:16417613-16417632 None:intergenic 20.0%
!!! AATGACTGATTGATAAATTT+TGG + chr6_1:16417894-16417913 Msa0877250:intron 20.0%
!!! TTTATTTTATCCTATCCATT+TGG - chr6_1:16418183-16418202 None:intergenic 20.0%
!!! ATATAGGTTTTATGCTTAAA+AGG - chr6_1:16418619-16418638 None:intergenic 20.0%
!! TTTAGCAATATAAATTCGAT+CGG + chr6_1:16418736-16418755 Msa0877250:intron 20.0%
!!! GATCGAATTAATAATTGTTT+TGG + chr6_1:16419250-16419269 Msa0877250:intron 20.0%
!!! TCGAATTAATAATTGTTTTG+GGG + chr6_1:16419252-16419271 Msa0877250:intron 20.0%
!!! TAATTTTTATGTCGCAAATT+TGG + chr6_1:16419591-16419610 Msa0877250:intron 20.0%
!!! AATTTTTATGTCGCAAATTT+GGG + chr6_1:16419592-16419611 Msa0877250:intron 20.0%
!!! TAATATTTTTGTCGCAAATT+TGG + chr6_1:16419622-16419641 Msa0877250:intron 20.0%
!!! AATATTTTTGTCGCAAATTT+GGG + chr6_1:16419623-16419642 Msa0877250:intron 20.0%
!! ACTTTAATGCAAAAATTTAG+TGG + chr6_1:16419678-16419697 Msa0877250:intron 20.0%
!! AAAAATTTAGTGGAAATTGT+TGG + chr6_1:16419688-16419707 Msa0877250:intron 20.0%
!!! TATTTTTTTGGTGAATAATG+TGG + chr6_1:16419717-16419736 Msa0877250:intron 20.0%
!!! ATTTTTTTGGTGAATAATGT+GGG + chr6_1:16419718-16419737 Msa0877250:intron 20.0%
!!! CTTTATCTTGCTTTTTTTTA+GGG - chr6_1:16419798-16419817 None:intergenic 20.0%
!!! ACTTTATCTTGCTTTTTTTT+AGG - chr6_1:16419799-16419818 None:intergenic 20.0%
!!! TTTGTTTTTTTTGTTACAGA+TGG - chr6_1:16419878-16419897 None:intergenic 20.0%
!! TAGGATAAAATTAGATTAAG+TGG + chr6_1:16420311-16420330 Msa0877250:intron 20.0%
!!! TTGATTTTAGGAAAATTCTA+TGG - chr6_1:16420475-16420494 None:intergenic 20.0%
!!! TCATACAACCTTTATATTTT+TGG - chr6_1:16420796-16420815 None:intergenic 20.0%
!!! GGGTATTATAATTTTTTTTG+AGG - chr6_1:16420931-16420950 None:intergenic 20.0%
!!! GTAATTGTTTAATTTAAGTG+GGG - chr6_1:16420955-16420974 None:intergenic 20.0%
!! CTTTAATGAAAATTTGTGTA+TGG + chr6_1:16421509-16421528 Msa0877250:intron 20.0%
!!! GTTTGTTGAAATTATGAAAT+GGG + chr6_1:16421531-16421550 Msa0877250:intron 20.0%
!!! TTTTTGTTGAAATTATGTTC+AGG + chr6_1:16421671-16421690 Msa0877250:intron 20.0%
!! AAATTCAAACAAGTAAATCA+AGG - chr6_1:16422003-16422022 None:intergenic 20.0%
!!! GTTTTTAAATGACTAACTAT+TGG + chr6_1:16422102-16422121 Msa0877250:intron 20.0%
!! TTTATAACTAATACTAGGTT+TGG + chr6_1:16422264-16422283 Msa0877250:intron 20.0%
!!! TTTTTTTTTGAACAACTTAC+TGG + chr6_1:16422334-16422353 Msa0877250:intron 20.0%
!! AAAATAAACAATTCCCTTTA+AGG - chr6_1:16422395-16422414 None:intergenic 20.0%
!!! TTTTTGTTGAAATTATGTTC+AGG + chr6_1:16421671-16421690 Msa0877250:intron 20.0%
!! CAGAAGATATAATATTAACA+AGG - chr6_1:16423082-16423101 None:intergenic 20.0%
!!! TTGTAGACTTAATTGTTTTT+TGG + chr6_1:16423242-16423261 Msa0877250:intron 20.0%
!!! TGTAGACTTAATTGTTTTTT+GGG + chr6_1:16423243-16423262 Msa0877250:intron 20.0%
!!! AATTTTCTGATGTATAATGA+GGG + chr6_1:16423856-16423875 Msa0877250:intron 20.0%
!!! AGATAGTTATATGTTTCTAA+TGG + chr6_1:16424137-16424156 Msa0877250:three_prime_UTR 20.0%
!! TACTATATATAGAGATAATG+GGG - chr6_1:16417016-16417035 None:intergenic 20.0%
!! TCTCAACTAAACTTATATAT+TGG + chr6_1:16417060-16417079 Msa0877250:intron 20.0%
!! TGTATCTTGAAATTTAATGT+TGG - chr6_1:16417443-16417462 None:intergenic 20.0%
!!! ATTTTATTATTGAACTTGCA+TGG - chr6_1:16417613-16417632 None:intergenic 20.0%
!!! AATGACTGATTGATAAATTT+TGG + chr6_1:16417894-16417913 Msa0877250:intron 20.0%
!!! TTTATTTTATCCTATCCATT+TGG - chr6_1:16418183-16418202 None:intergenic 20.0%
!!! ATATAGGTTTTATGCTTAAA+AGG - chr6_1:16418619-16418638 None:intergenic 20.0%
!! TTTAGCAATATAAATTCGAT+CGG + chr6_1:16418736-16418755 Msa0877250:intron 20.0%
!!! GATCGAATTAATAATTGTTT+TGG + chr6_1:16419250-16419269 Msa0877250:intron 20.0%
!!! TCGAATTAATAATTGTTTTG+GGG + chr6_1:16419252-16419271 Msa0877250:intron 20.0%
!!! TAATTTTTATGTCGCAAATT+TGG + chr6_1:16419591-16419610 Msa0877250:intron 20.0%
!!! AATTTTTATGTCGCAAATTT+GGG + chr6_1:16419592-16419611 Msa0877250:intron 20.0%
!!! TAATATTTTTGTCGCAAATT+TGG + chr6_1:16419622-16419641 Msa0877250:intron 20.0%
!!! AATATTTTTGTCGCAAATTT+GGG + chr6_1:16419623-16419642 Msa0877250:intron 20.0%
!! ACTTTAATGCAAAAATTTAG+TGG + chr6_1:16419678-16419697 Msa0877250:intron 20.0%
!! AAAAATTTAGTGGAAATTGT+TGG + chr6_1:16419688-16419707 Msa0877250:intron 20.0%
!!! TATTTTTTTGGTGAATAATG+TGG + chr6_1:16419717-16419736 Msa0877250:intron 20.0%
!!! ATTTTTTTGGTGAATAATGT+GGG + chr6_1:16419718-16419737 Msa0877250:intron 20.0%
!!! CTTTATCTTGCTTTTTTTTA+GGG - chr6_1:16419798-16419817 None:intergenic 20.0%
!!! ACTTTATCTTGCTTTTTTTT+AGG - chr6_1:16419799-16419818 None:intergenic 20.0%
!!! TTTGTTTTTTTTGTTACAGA+TGG - chr6_1:16419878-16419897 None:intergenic 20.0%
!! TAGGATAAAATTAGATTAAG+TGG + chr6_1:16420311-16420330 Msa0877250:intron 20.0%
!!! TTGATTTTAGGAAAATTCTA+TGG - chr6_1:16420475-16420494 None:intergenic 20.0%
!!! TCATACAACCTTTATATTTT+TGG - chr6_1:16420796-16420815 None:intergenic 20.0%
!!! GGGTATTATAATTTTTTTTG+AGG - chr6_1:16420931-16420950 None:intergenic 20.0%
!!! GTAATTGTTTAATTTAAGTG+GGG - chr6_1:16420955-16420974 None:intergenic 20.0%
!! CTTTAATGAAAATTTGTGTA+TGG + chr6_1:16421509-16421528 Msa0877250:intron 20.0%
!!! GTTTGTTGAAATTATGAAAT+GGG + chr6_1:16421531-16421550 Msa0877250:intron 20.0%
!!! TTTTTGTTGAAATTATGTTC+AGG + chr6_1:16421671-16421690 Msa0877250:intron 20.0%
!! AAATTCAAACAAGTAAATCA+AGG - chr6_1:16422003-16422022 None:intergenic 20.0%
!!! GTTTTTAAATGACTAACTAT+TGG + chr6_1:16422102-16422121 Msa0877250:intron 20.0%
!! TTTATAACTAATACTAGGTT+TGG + chr6_1:16422264-16422283 Msa0877250:intron 20.0%
!!! TTTTTTTTTGAACAACTTAC+TGG + chr6_1:16422334-16422353 Msa0877250:intron 20.0%
!! AAAATAAACAATTCCCTTTA+AGG - chr6_1:16422395-16422414 None:intergenic 20.0%
!!! TTTTTGTTGAAATTATGTTC+AGG + chr6_1:16421671-16421690 Msa0877250:intron 20.0%
!! CAGAAGATATAATATTAACA+AGG - chr6_1:16423082-16423101 None:intergenic 20.0%
!!! TTGTAGACTTAATTGTTTTT+TGG + chr6_1:16423242-16423261 Msa0877250:intron 20.0%
!!! TGTAGACTTAATTGTTTTTT+GGG + chr6_1:16423243-16423262 Msa0877250:intron 20.0%
!!! AATTTTCTGATGTATAATGA+GGG + chr6_1:16423856-16423875 Msa0877250:intron 20.0%
!!! AGATAGTTATATGTTTCTAA+TGG + chr6_1:16424137-16424156 Msa0877250:three_prime_UTR 20.0%
!! ACTATATATAGAGATAATGG+GGG - chr6_1:16417015-16417034 None:intergenic 25.0%
!!! GTATTTGATAATTTTTTGGG+TGG - chr6_1:16417086-16417105 None:intergenic 25.0%
!!! ACTATTTGATAGTGTGAAAA+TGG + chr6_1:16417217-16417236 Msa0877250:intron 25.0%
!!! CTATTTGATAGTGTGAAAAT+GGG + chr6_1:16417218-16417237 Msa0877250:intron 25.0%
! ATGTTGGAGTAATCTTTAAA+AGG - chr6_1:16417427-16417446 None:intergenic 25.0%
! CATAAATTGTCTATGTTATG+TGG - chr6_1:16417467-16417486 None:intergenic 25.0%
! TTGAAAATTGTATCAAGGAA+TGG - chr6_1:16417638-16417657 None:intergenic 25.0%
! TAATGGGAAAGGAATAAATA+TGG + chr6_1:16417933-16417952 Msa0877250:intron 25.0%
!! AAATATGGAAGACAACATTT+TGG + chr6_1:16417948-16417967 Msa0877250:intron 25.0%
!! TTTGGATATGTAAAGAGTTT+TGG + chr6_1:16417966-16417985 Msa0877250:intron 25.0%
!! TAGTAATTAGTTTCTCTTAG+TGG + chr6_1:16418057-16418076 Msa0877250:intron 25.0%
! ATTCAGGATAGAAATTACAA+AGG - chr6_1:16418232-16418251 None:intergenic 25.0%
! TTTCTATCCTGAATATAAGA+TGG + chr6_1:16418238-16418257 Msa0877250:intron 25.0%
! TTCTATCCTGAATATAAGAT+GGG + chr6_1:16418239-16418258 Msa0877250:intron 25.0%
! GATAGAGATATGATATGATA+AGG - chr6_1:16418504-16418523 None:intergenic 25.0%
! AGACATGTAATTAAGAAATG+TGG + chr6_1:16418586-16418605 Msa0877250:intron 25.0%
! GACATGTAATTAAGAAATGT+GGG + chr6_1:16418587-16418606 Msa0877250:intron 25.0%
!!! GGATTCATTTTTCTATATCA+AGG + chr6_1:16418689-16418708 Msa0877250:intron 25.0%
! AGGATCACCAAAAATATAAA+TGG - chr6_1:16418818-16418837 None:intergenic 25.0%
!! TCATAATTTCTGGATTATGT+GGG + chr6_1:16418839-16418858 Msa0877250:intron 25.0%
! GACTATAAATAGCTTCATTA+TGG + chr6_1:16418882-16418901 Msa0877250:intron 25.0%
! TATAAATAGCTTCATTATGG+TGG + chr6_1:16418885-16418904 Msa0877250:intron 25.0%
! ATATTCATTGATGTCACAAT+GGG - chr6_1:16418979-16418998 None:intergenic 25.0%
! AATATGGTGCTTATAAAGAT+GGG + chr6_1:16418994-16419013 Msa0877250:intron 25.0%
! CTTGAATCAATTATGCATTT+AGG - chr6_1:16419060-16419079 None:intergenic 25.0%
!! TTTTTGTTGAAGATTCATGT+TGG - chr6_1:16419166-16419185 None:intergenic 25.0%
! AGAAAACAGTCAAATTAAGA+CGG + chr6_1:16419454-16419473 Msa0877250:intron 25.0%
!! TACAGATACTATTTTATCGT+TGG + chr6_1:16420203-16420222 Msa0877250:intron 25.0%
! TGTTACACTTAAAACAAAGT+AGG + chr6_1:16420292-16420311 Msa0877250:intron 25.0%
!! TGATGAATTGATGATACTAT+AGG + chr6_1:16420347-16420366 Msa0877250:intron 25.0%
!!! AAAACGTGCAAATTGATTTT+AGG - chr6_1:16420487-16420506 None:intergenic 25.0%
! ACTTAATCAGTCAATTTGAA+AGG + chr6_1:16421065-16421084 Msa0877250:intron 25.0%
! AAAGAATATCACCTATATTG+AGG - chr6_1:16421348-16421367 None:intergenic 25.0%
!!! GGTTTGTTGAAATTATGAAA+TGG + chr6_1:16421530-16421549 Msa0877250:intron 25.0%
!! CCATCATTTGAAATAAACAA+TGG - chr6_1:16421777-16421796 None:intergenic 25.0%
! CCATTGTTTATTTCAAATGA+TGG + chr6_1:16421774-16421793 Msa0877250:intron 25.0%
! AGGAAGCAATTATCTATAAT+TGG + chr6_1:16421829-16421848 Msa0877250:intron 25.0%
! AAGCAATTATCTATAATTGG+AGG + chr6_1:16421832-16421851 Msa0877250:intron 25.0%
! AGCAATTATCTATAATTGGA+GGG + chr6_1:16421833-16421852 Msa0877250:intron 25.0%
!!! CATAAAACTAGTATTGATGA+TGG + chr6_1:16421888-16421907 Msa0877250:intron 25.0%
! AGTAAGTAAATGCATTCAAA+AGG - chr6_1:16422828-16422847 None:intergenic 25.0%
!! TTCTTTGTTAACGATTTTGA+TGG + chr6_1:16422937-16422956 Msa0877250:CDS 25.0%
!!! TCTTTGTTAACGATTTTGAT+GGG + chr6_1:16422938-16422957 Msa0877250:CDS 25.0%
!! ATTGAAGATTGTTATTAGTG+TGG + chr6_1:16423269-16423288 Msa0877250:intron 25.0%
!! TTGAAGATTGTTATTAGTGT+GGG + chr6_1:16423270-16423289 Msa0877250:intron 25.0%
! TAGTTTAGATGAAAGTTTGA+TGG + chr6_1:16423315-16423334 Msa0877250:intron 25.0%
! AGTTTAGATGAAAGTTTGAT+GGG + chr6_1:16423316-16423335 Msa0877250:intron 25.0%
! TGATGCTAACATATACAAAA+AGG - chr6_1:16423586-16423605 None:intergenic 25.0%
! AGAAGTTAATGACCAAATTA+AGG + chr6_1:16423675-16423694 Msa0877250:three_prime_UTR 25.0%
! GAAGTTAATGACCAAATTAA+GGG + chr6_1:16423676-16423695 Msa0877250:three_prime_UTR 25.0%
! TGAATGATGGTTTAAAAGAA+TGG + chr6_1:16423780-16423799 Msa0877250:intron 25.0%
!! TTTCTAAAGAATGTAAAGGA+GGG - chr6_1:16423826-16423845 None:intergenic 25.0%
!! ATTTCTAAAGAATGTAAAGG+AGG - chr6_1:16423827-16423846 None:intergenic 25.0%
!! TGGATTTCTAAAGAATGTAA+AGG - chr6_1:16423830-16423849 None:intergenic 25.0%
! TACATCAGAAAATTCAATCA+TGG - chr6_1:16423850-16423869 None:intergenic 25.0%
!! GAATTTTCTGATGTATAATG+AGG + chr6_1:16423855-16423874 Msa0877250:intron 25.0%
! TGATTCTGTACAAAAATACA+AGG - chr6_1:16423934-16423953 None:intergenic 25.0%
! ATTTGTCTAAGAAATATCCA+AGG - chr6_1:16423959-16423978 None:intergenic 25.0%
! TTAGACAAATCAACAATTGT+TGG + chr6_1:16423969-16423988 Msa0877250:three_prime_UTR 25.0%
!! TATACCTTCAAGTTATTAGA+AGG + chr6_1:16424074-16424093 Msa0877250:three_prime_UTR 25.0%
! TTAACCTTCTAATAACTTGA+AGG - chr6_1:16424081-16424100 None:intergenic 25.0%
! TTATTAGAAGGTTAACCTAT+TGG + chr6_1:16424086-16424105 Msa0877250:three_prime_UTR 25.0%
! AGTATTATCAATCATCCAAT+AGG - chr6_1:16424104-16424123 None:intergenic 25.0%
!! ACTATATATAGAGATAATGG+GGG - chr6_1:16417015-16417034 None:intergenic 25.0%
!!! GTATTTGATAATTTTTTGGG+TGG - chr6_1:16417086-16417105 None:intergenic 25.0%
!!! ACTATTTGATAGTGTGAAAA+TGG + chr6_1:16417217-16417236 Msa0877250:intron 25.0%
!!! CTATTTGATAGTGTGAAAAT+GGG + chr6_1:16417218-16417237 Msa0877250:intron 25.0%
! ATGTTGGAGTAATCTTTAAA+AGG - chr6_1:16417427-16417446 None:intergenic 25.0%
! CATAAATTGTCTATGTTATG+TGG - chr6_1:16417467-16417486 None:intergenic 25.0%
! TTGAAAATTGTATCAAGGAA+TGG - chr6_1:16417638-16417657 None:intergenic 25.0%
! TAATGGGAAAGGAATAAATA+TGG + chr6_1:16417933-16417952 Msa0877250:intron 25.0%
!! AAATATGGAAGACAACATTT+TGG + chr6_1:16417948-16417967 Msa0877250:intron 25.0%
!! TTTGGATATGTAAAGAGTTT+TGG + chr6_1:16417966-16417985 Msa0877250:intron 25.0%
!! TAGTAATTAGTTTCTCTTAG+TGG + chr6_1:16418057-16418076 Msa0877250:intron 25.0%
! ATTCAGGATAGAAATTACAA+AGG - chr6_1:16418232-16418251 None:intergenic 25.0%
! TTTCTATCCTGAATATAAGA+TGG + chr6_1:16418238-16418257 Msa0877250:intron 25.0%
! TTCTATCCTGAATATAAGAT+GGG + chr6_1:16418239-16418258 Msa0877250:intron 25.0%
! GATAGAGATATGATATGATA+AGG - chr6_1:16418504-16418523 None:intergenic 25.0%
! AGACATGTAATTAAGAAATG+TGG + chr6_1:16418586-16418605 Msa0877250:intron 25.0%
! GACATGTAATTAAGAAATGT+GGG + chr6_1:16418587-16418606 Msa0877250:intron 25.0%
!!! GGATTCATTTTTCTATATCA+AGG + chr6_1:16418689-16418708 Msa0877250:intron 25.0%
! AGGATCACCAAAAATATAAA+TGG - chr6_1:16418818-16418837 None:intergenic 25.0%
!! TCATAATTTCTGGATTATGT+GGG + chr6_1:16418839-16418858 Msa0877250:intron 25.0%
! GACTATAAATAGCTTCATTA+TGG + chr6_1:16418882-16418901 Msa0877250:intron 25.0%
! TATAAATAGCTTCATTATGG+TGG + chr6_1:16418885-16418904 Msa0877250:intron 25.0%
! ATATTCATTGATGTCACAAT+GGG - chr6_1:16418979-16418998 None:intergenic 25.0%
! AATATGGTGCTTATAAAGAT+GGG + chr6_1:16418994-16419013 Msa0877250:intron 25.0%
! CTTGAATCAATTATGCATTT+AGG - chr6_1:16419060-16419079 None:intergenic 25.0%
!! TTTTTGTTGAAGATTCATGT+TGG - chr6_1:16419166-16419185 None:intergenic 25.0%
! AGAAAACAGTCAAATTAAGA+CGG + chr6_1:16419454-16419473 Msa0877250:intron 25.0%
!! TACAGATACTATTTTATCGT+TGG + chr6_1:16420203-16420222 Msa0877250:intron 25.0%
! TGTTACACTTAAAACAAAGT+AGG + chr6_1:16420292-16420311 Msa0877250:intron 25.0%
!! TGATGAATTGATGATACTAT+AGG + chr6_1:16420347-16420366 Msa0877250:intron 25.0%
!!! AAAACGTGCAAATTGATTTT+AGG - chr6_1:16420487-16420506 None:intergenic 25.0%
! ACTTAATCAGTCAATTTGAA+AGG + chr6_1:16421065-16421084 Msa0877250:intron 25.0%
! AAAGAATATCACCTATATTG+AGG - chr6_1:16421348-16421367 None:intergenic 25.0%
!!! GGTTTGTTGAAATTATGAAA+TGG + chr6_1:16421530-16421549 Msa0877250:intron 25.0%
!! CCATCATTTGAAATAAACAA+TGG - chr6_1:16421777-16421796 None:intergenic 25.0%
! CCATTGTTTATTTCAAATGA+TGG + chr6_1:16421774-16421793 Msa0877250:intron 25.0%
! AGGAAGCAATTATCTATAAT+TGG + chr6_1:16421829-16421848 Msa0877250:intron 25.0%
! AAGCAATTATCTATAATTGG+AGG + chr6_1:16421832-16421851 Msa0877250:intron 25.0%
! AGCAATTATCTATAATTGGA+GGG + chr6_1:16421833-16421852 Msa0877250:intron 25.0%
!!! CATAAAACTAGTATTGATGA+TGG + chr6_1:16421888-16421907 Msa0877250:intron 25.0%
! AGTAAGTAAATGCATTCAAA+AGG - chr6_1:16422828-16422847 None:intergenic 25.0%
!! TTCTTTGTTAACGATTTTGA+TGG + chr6_1:16422937-16422956 Msa0877250:CDS 25.0%
!!! TCTTTGTTAACGATTTTGAT+GGG + chr6_1:16422938-16422957 Msa0877250:CDS 25.0%
!! ATTGAAGATTGTTATTAGTG+TGG + chr6_1:16423269-16423288 Msa0877250:intron 25.0%
!! TTGAAGATTGTTATTAGTGT+GGG + chr6_1:16423270-16423289 Msa0877250:intron 25.0%
! TAGTTTAGATGAAAGTTTGA+TGG + chr6_1:16423315-16423334 Msa0877250:intron 25.0%
! AGTTTAGATGAAAGTTTGAT+GGG + chr6_1:16423316-16423335 Msa0877250:intron 25.0%
! TGATGCTAACATATACAAAA+AGG - chr6_1:16423586-16423605 None:intergenic 25.0%
! AGAAGTTAATGACCAAATTA+AGG + chr6_1:16423675-16423694 Msa0877250:three_prime_UTR 25.0%
! GAAGTTAATGACCAAATTAA+GGG + chr6_1:16423676-16423695 Msa0877250:three_prime_UTR 25.0%
! TGAATGATGGTTTAAAAGAA+TGG + chr6_1:16423780-16423799 Msa0877250:intron 25.0%
!! TTTCTAAAGAATGTAAAGGA+GGG - chr6_1:16423826-16423845 None:intergenic 25.0%
!! ATTTCTAAAGAATGTAAAGG+AGG - chr6_1:16423827-16423846 None:intergenic 25.0%
!! TGGATTTCTAAAGAATGTAA+AGG - chr6_1:16423830-16423849 None:intergenic 25.0%
! TACATCAGAAAATTCAATCA+TGG - chr6_1:16423850-16423869 None:intergenic 25.0%
!! GAATTTTCTGATGTATAATG+AGG + chr6_1:16423855-16423874 Msa0877250:intron 25.0%
! TGATTCTGTACAAAAATACA+AGG - chr6_1:16423934-16423953 None:intergenic 25.0%
! ATTTGTCTAAGAAATATCCA+AGG - chr6_1:16423959-16423978 None:intergenic 25.0%
! TTAGACAAATCAACAATTGT+TGG + chr6_1:16423969-16423988 Msa0877250:three_prime_UTR 25.0%
!! TATACCTTCAAGTTATTAGA+AGG + chr6_1:16424074-16424093 Msa0877250:three_prime_UTR 25.0%
! TTAACCTTCTAATAACTTGA+AGG - chr6_1:16424081-16424100 None:intergenic 25.0%
! TTATTAGAAGGTTAACCTAT+TGG + chr6_1:16424086-16424105 Msa0877250:three_prime_UTR 25.0%
! AGTATTATCAATCATCCAAT+AGG - chr6_1:16424104-16424123 None:intergenic 25.0%
TAATTCACCAAGTTAAGAGT+AGG - chr6_1:16417386-16417405 None:intergenic 30.0%
! GTGTTTTTCGTATGATTCAT+AGG - chr6_1:16417803-16417822 None:intergenic 30.0%
TATGGTGTGAGTTATCAATA+AGG + chr6_1:16417849-16417868 Msa0877250:intron 30.0%
AATTGAAAAAGACGCGTAAT+GGG + chr6_1:16417917-16417936 Msa0877250:intron 30.0%
! ACATTGAAGGTATACATATC+AGG + chr6_1:16418004-16418023 Msa0877250:intron 30.0%
TCAGTATTATTTCCAGACTT+AGG + chr6_1:16418080-16418099 Msa0877250:intron 30.0%
CAGTATTATTTCCAGACTTA+GGG + chr6_1:16418081-16418100 Msa0877250:intron 30.0%
ATCAAACATGAGATTTAAGC+AGG - chr6_1:16418157-16418176 None:intergenic 30.0%
TTACAAAGGAAAGTCATGAT+AGG - chr6_1:16418218-16418237 None:intergenic 30.0%
TTCTAACCCATCTTATATTC+AGG - chr6_1:16418248-16418267 None:intergenic 30.0%
ATACACACATGATAACAAAC+AGG - chr6_1:16418452-16418471 None:intergenic 30.0%
! GTATACATGCATCTTGTTAT+TGG + chr6_1:16418650-16418669 Msa0877250:intron 30.0%
AATCTATTGAGTGGAAGTTA+TGG + chr6_1:16418760-16418779 Msa0877250:intron 30.0%
CATAATCCAGAAATTATGAG+AGG - chr6_1:16418838-16418857 None:intergenic 30.0%
! CTCATAATTTCTGGATTATG+TGG + chr6_1:16418838-16418857 Msa0877250:intron 30.0%
!! CTTCATTATGGTGGATTATA+TGG + chr6_1:16418894-16418913 Msa0877250:intron 30.0%
TATTCATTGATGTCACAATG+GGG - chr6_1:16418978-16418997 None:intergenic 30.0%
CATATTCATTGATGTCACAA+TGG - chr6_1:16418980-16418999 None:intergenic 30.0%
CATTGTGACATCAATGAATA+TGG + chr6_1:16418978-16418997 Msa0877250:intron 30.0%
GAATATGGTGCTTATAAAGA+TGG + chr6_1:16418993-16419012 Msa0877250:intron 30.0%
CATGAATAATAGAAGAGAGA+GGG - chr6_1:16419034-16419053 None:intergenic 30.0%
CTCTCTCTTCTATTATTCAT+GGG + chr6_1:16419033-16419052 Msa0877250:intron 30.0%
AAACGAATGATGTATACAGT+CGG + chr6_1:16419318-16419337 Msa0877250:intron 30.0%
! TAAAGTAGATCAAGTTGTGA+CGG - chr6_1:16419664-16419683 None:intergenic 30.0%
AATTTAGTGGAAATTGTTGG+AGG + chr6_1:16419691-16419710 Msa0877250:intron 30.0%
ATTTAGTGGAAATTGTTGGA+GGG + chr6_1:16419692-16419711 Msa0877250:intron 30.0%
!!! TGTTGGAGGGAATATTTTTT+TGG + chr6_1:16419705-16419724 Msa0877250:intron 30.0%
!! ATTGTGTTTTTGTGCGTATA+TGG - chr6_1:16419855-16419874 None:intergenic 30.0%
TCTTAAGTGTTACACTTTGT+GGG + chr6_1:16420268-16420287 Msa0877250:intron 30.0%
! ACGTTTTCCTCTACATAAAA+TGG + chr6_1:16420500-16420519 Msa0877250:intron 30.0%
GTATATCTCGATACAAATGT+TGG - chr6_1:16420527-16420546 None:intergenic 30.0%
TGTATCGAGATATACTTGAT+TGG + chr6_1:16420532-16420551 Msa0877250:intron 30.0%
GTATCGAGATATACTTGATT+GGG + chr6_1:16420533-16420552 Msa0877250:intron 30.0%
TGTTCGAGAAAATCTTTCAT+GGG - chr6_1:16420714-16420733 None:intergenic 30.0%
ATGTTCGAGAAAATCTTTCA+TGG - chr6_1:16420715-16420734 None:intergenic 30.0%
TCATTCAAATGAAATTGCCA+CGG - chr6_1:16420747-16420766 None:intergenic 30.0%
AAGCAGAGCCAAAAATATAA+AGG + chr6_1:16420785-16420804 Msa0877250:intron 30.0%
TATAGAACTTGTCTACATCA+AGG + chr6_1:16420833-16420852 Msa0877250:intron 30.0%
! TTGTTTAATTTAAGTGGGGT+GGG - chr6_1:16420951-16420970 None:intergenic 30.0%
! ATTGTTTAATTTAAGTGGGG+TGG - chr6_1:16420952-16420971 None:intergenic 30.0%
! GTTTGTTGAAAATTTGAGTC+TGG + chr6_1:16421454-16421473 Msa0877250:intron 30.0%
!!! TTTTGACTTCTGCTGAAATT+AGG + chr6_1:16421481-16421500 Msa0877250:intron 30.0%
TGAAATGGGTATCTCTTTAA+TGG + chr6_1:16421645-16421664 Msa0877250:intron 30.0%
GAAATGCAGGTTATTTATGT+TGG + chr6_1:16421910-16421929 Msa0877250:intron 30.0%
!! TCGATTTGTTGAAACTTGAA+TGG + chr6_1:16421966-16421985 Msa0877250:intron 30.0%
TAATGATTCGACAATTCTCA+TGG + chr6_1:16422132-16422151 Msa0877250:intron 30.0%
TTGAACTTGATTCTCCTTAA+AGG + chr6_1:16422378-16422397 Msa0877250:intron 30.0%
TGAACTTGATTCTCCTTAAA+GGG + chr6_1:16422379-16422398 Msa0877250:intron 30.0%
TGTAAAACAGTCCTTGATTT+GGG + chr6_1:16422449-16422468 Msa0877250:intron 30.0%
!! GGAGAATATTTTTGTGTTTC+TGG + chr6_1:16422512-16422531 Msa0877250:intron 30.0%
!!! TATTTTTGTGTTTCTGGAAC+TGG + chr6_1:16422518-16422537 Msa0877250:intron 30.0%
GACAGTTATGAAAATGTTGA+AGG + chr6_1:16422889-16422908 Msa0877250:CDS 30.0%
!!! TTTTTAGGTTAGTTCCTATG+TGG - chr6_1:16423001-16423020 None:intergenic 30.0%
GGAACTAACCTAAAAAATTC+CGG + chr6_1:16423005-16423024 Msa0877250:exon 30.0%
GAACTAACCTAAAAAATTCC+GGG + chr6_1:16423006-16423025 Msa0877250:exon 30.0%
AACTAACCTAAAAAATTCCG+GGG + chr6_1:16423007-16423026 Msa0877250:exon 30.0%
TGTCTGTTCAATTAGCAAAT+GGG - chr6_1:16423106-16423125 None:intergenic 30.0%
! CAGTTACGACATATTTGTTA+TGG - chr6_1:16423129-16423148 None:intergenic 30.0%
TTCATCTAAACTATGAAGCA+GGG - chr6_1:16423308-16423327 None:intergenic 30.0%
TTTCATCTAAACTATGAAGC+AGG - chr6_1:16423309-16423328 None:intergenic 30.0%
! AGTTGGTTTCAATGTAACAA+AGG - chr6_1:16423364-16423383 None:intergenic 30.0%
TAGCAACCAAGAATAACAAT+AGG - chr6_1:16423399-16423418 None:intergenic 30.0%
!! TTTTTGGGCATGGAATTTAT+TGG + chr6_1:16423456-16423475 Msa0877250:three_prime_UTR 30.0%
! ATCATATCTAGTTGTCCTTT+TGG + chr6_1:16423602-16423621 Msa0877250:intron 30.0%
CAAAGTTGTTACCCTTAATT+TGG - chr6_1:16423690-16423709 None:intergenic 30.0%
CAAATTAAGGGTAACAACTT+TGG + chr6_1:16423688-16423707 Msa0877250:intron 30.0%
! AAGCTCTTTATCATCTCTTT+TGG + chr6_1:16423881-16423900 Msa0877250:intron 30.0%
! AGCTCTTTATCATCTCTTTT+GGG + chr6_1:16423882-16423901 Msa0877250:intron 30.0%
! TTTTGTACAGAATCAAACCT+TGG + chr6_1:16423939-16423958 Msa0877250:intron 30.0%
TAATTCACCAAGTTAAGAGT+AGG - chr6_1:16417386-16417405 None:intergenic 30.0%
! GTGTTTTTCGTATGATTCAT+AGG - chr6_1:16417803-16417822 None:intergenic 30.0%
TATGGTGTGAGTTATCAATA+AGG + chr6_1:16417849-16417868 Msa0877250:intron 30.0%
AATTGAAAAAGACGCGTAAT+GGG + chr6_1:16417917-16417936 Msa0877250:intron 30.0%
! ACATTGAAGGTATACATATC+AGG + chr6_1:16418004-16418023 Msa0877250:intron 30.0%
TCAGTATTATTTCCAGACTT+AGG + chr6_1:16418080-16418099 Msa0877250:intron 30.0%
CAGTATTATTTCCAGACTTA+GGG + chr6_1:16418081-16418100 Msa0877250:intron 30.0%
ATCAAACATGAGATTTAAGC+AGG - chr6_1:16418157-16418176 None:intergenic 30.0%
TTACAAAGGAAAGTCATGAT+AGG - chr6_1:16418218-16418237 None:intergenic 30.0%
TTCTAACCCATCTTATATTC+AGG - chr6_1:16418248-16418267 None:intergenic 30.0%
ATACACACATGATAACAAAC+AGG - chr6_1:16418452-16418471 None:intergenic 30.0%
! GTATACATGCATCTTGTTAT+TGG + chr6_1:16418650-16418669 Msa0877250:intron 30.0%
AATCTATTGAGTGGAAGTTA+TGG + chr6_1:16418760-16418779 Msa0877250:intron 30.0%
CATAATCCAGAAATTATGAG+AGG - chr6_1:16418838-16418857 None:intergenic 30.0%
! CTCATAATTTCTGGATTATG+TGG + chr6_1:16418838-16418857 Msa0877250:intron 30.0%
!! CTTCATTATGGTGGATTATA+TGG + chr6_1:16418894-16418913 Msa0877250:intron 30.0%
TATTCATTGATGTCACAATG+GGG - chr6_1:16418978-16418997 None:intergenic 30.0%
CATATTCATTGATGTCACAA+TGG - chr6_1:16418980-16418999 None:intergenic 30.0%
CATTGTGACATCAATGAATA+TGG + chr6_1:16418978-16418997 Msa0877250:intron 30.0%
GAATATGGTGCTTATAAAGA+TGG + chr6_1:16418993-16419012 Msa0877250:intron 30.0%
CATGAATAATAGAAGAGAGA+GGG - chr6_1:16419034-16419053 None:intergenic 30.0%
CTCTCTCTTCTATTATTCAT+GGG + chr6_1:16419033-16419052 Msa0877250:intron 30.0%
AAACGAATGATGTATACAGT+CGG + chr6_1:16419318-16419337 Msa0877250:intron 30.0%
! TAAAGTAGATCAAGTTGTGA+CGG - chr6_1:16419664-16419683 None:intergenic 30.0%
AATTTAGTGGAAATTGTTGG+AGG + chr6_1:16419691-16419710 Msa0877250:intron 30.0%
ATTTAGTGGAAATTGTTGGA+GGG + chr6_1:16419692-16419711 Msa0877250:intron 30.0%
!!! TGTTGGAGGGAATATTTTTT+TGG + chr6_1:16419705-16419724 Msa0877250:intron 30.0%
!! ATTGTGTTTTTGTGCGTATA+TGG - chr6_1:16419855-16419874 None:intergenic 30.0%
TCTTAAGTGTTACACTTTGT+GGG + chr6_1:16420268-16420287 Msa0877250:intron 30.0%
! ACGTTTTCCTCTACATAAAA+TGG + chr6_1:16420500-16420519 Msa0877250:intron 30.0%
GTATATCTCGATACAAATGT+TGG - chr6_1:16420527-16420546 None:intergenic 30.0%
TGTATCGAGATATACTTGAT+TGG + chr6_1:16420532-16420551 Msa0877250:intron 30.0%
GTATCGAGATATACTTGATT+GGG + chr6_1:16420533-16420552 Msa0877250:intron 30.0%
TGTTCGAGAAAATCTTTCAT+GGG - chr6_1:16420714-16420733 None:intergenic 30.0%
ATGTTCGAGAAAATCTTTCA+TGG - chr6_1:16420715-16420734 None:intergenic 30.0%
TCATTCAAATGAAATTGCCA+CGG - chr6_1:16420747-16420766 None:intergenic 30.0%
AAGCAGAGCCAAAAATATAA+AGG + chr6_1:16420785-16420804 Msa0877250:intron 30.0%
TATAGAACTTGTCTACATCA+AGG + chr6_1:16420833-16420852 Msa0877250:intron 30.0%
! TTGTTTAATTTAAGTGGGGT+GGG - chr6_1:16420951-16420970 None:intergenic 30.0%
! ATTGTTTAATTTAAGTGGGG+TGG - chr6_1:16420952-16420971 None:intergenic 30.0%
! GTTTGTTGAAAATTTGAGTC+TGG + chr6_1:16421454-16421473 Msa0877250:intron 30.0%
!!! TTTTGACTTCTGCTGAAATT+AGG + chr6_1:16421481-16421500 Msa0877250:intron 30.0%
TGAAATGGGTATCTCTTTAA+TGG + chr6_1:16421645-16421664 Msa0877250:intron 30.0%
GAAATGCAGGTTATTTATGT+TGG + chr6_1:16421910-16421929 Msa0877250:intron 30.0%
!! TCGATTTGTTGAAACTTGAA+TGG + chr6_1:16421966-16421985 Msa0877250:intron 30.0%
TAATGATTCGACAATTCTCA+TGG + chr6_1:16422132-16422151 Msa0877250:intron 30.0%
TTGAACTTGATTCTCCTTAA+AGG + chr6_1:16422378-16422397 Msa0877250:intron 30.0%
TGAACTTGATTCTCCTTAAA+GGG + chr6_1:16422379-16422398 Msa0877250:intron 30.0%
TGTAAAACAGTCCTTGATTT+GGG + chr6_1:16422449-16422468 Msa0877250:intron 30.0%
!! GGAGAATATTTTTGTGTTTC+TGG + chr6_1:16422512-16422531 Msa0877250:intron 30.0%
!!! TATTTTTGTGTTTCTGGAAC+TGG + chr6_1:16422518-16422537 Msa0877250:intron 30.0%
GACAGTTATGAAAATGTTGA+AGG + chr6_1:16422889-16422908 Msa0877250:CDS 30.0%
!!! TTTTTAGGTTAGTTCCTATG+TGG - chr6_1:16423001-16423020 None:intergenic 30.0%
GGAACTAACCTAAAAAATTC+CGG + chr6_1:16423005-16423024 Msa0877250:exon 30.0%
GAACTAACCTAAAAAATTCC+GGG + chr6_1:16423006-16423025 Msa0877250:exon 30.0%
AACTAACCTAAAAAATTCCG+GGG + chr6_1:16423007-16423026 Msa0877250:exon 30.0%
TGTCTGTTCAATTAGCAAAT+GGG - chr6_1:16423106-16423125 None:intergenic 30.0%
! CAGTTACGACATATTTGTTA+TGG - chr6_1:16423129-16423148 None:intergenic 30.0%
TTCATCTAAACTATGAAGCA+GGG - chr6_1:16423308-16423327 None:intergenic 30.0%
TTTCATCTAAACTATGAAGC+AGG - chr6_1:16423309-16423328 None:intergenic 30.0%
! AGTTGGTTTCAATGTAACAA+AGG - chr6_1:16423364-16423383 None:intergenic 30.0%
TAGCAACCAAGAATAACAAT+AGG - chr6_1:16423399-16423418 None:intergenic 30.0%
!! TTTTTGGGCATGGAATTTAT+TGG + chr6_1:16423456-16423475 Msa0877250:three_prime_UTR 30.0%
! ATCATATCTAGTTGTCCTTT+TGG + chr6_1:16423602-16423621 Msa0877250:intron 30.0%
CAAAGTTGTTACCCTTAATT+TGG - chr6_1:16423690-16423709 None:intergenic 30.0%
CAAATTAAGGGTAACAACTT+TGG + chr6_1:16423688-16423707 Msa0877250:intron 30.0%
! AAGCTCTTTATCATCTCTTT+TGG + chr6_1:16423881-16423900 Msa0877250:intron 30.0%
! AGCTCTTTATCATCTCTTTT+GGG + chr6_1:16423882-16423901 Msa0877250:intron 30.0%
! TTTTGTACAGAATCAAACCT+TGG + chr6_1:16423939-16423958 Msa0877250:intron 30.0%
TATTTCACTCGCGAAAAATC+AGG + chr6_1:16416746-16416765 Msa0877250:intron 35.0%
AATAAAAAGAGCGGAAAGAC+GGG - chr6_1:16416782-16416801 None:intergenic 35.0%
CAATAAAAAGAGCGGAAAGA+CGG - chr6_1:16416783-16416802 None:intergenic 35.0%
!!! TAGAGATAATGGGGGATTTT+GGG - chr6_1:16417007-16417026 None:intergenic 35.0%
!!! ATAGAGATAATGGGGGATTT+TGG - chr6_1:16417008-16417027 None:intergenic 35.0%
! CGTAGAATCGTAGATGTTTT+TGG + chr6_1:16417336-16417355 Msa0877250:intron 35.0%
CAATAAGGAACTATATCGCA+TGG + chr6_1:16417864-16417883 Msa0877250:intron 35.0%
GAATTGAAAAAGACGCGTAA+TGG + chr6_1:16417916-16417935 Msa0877250:intron 35.0%
!!! AAGAGTTTTGGATTGTGTCT+AGG + chr6_1:16417978-16417997 Msa0877250:intron 35.0%
TGTGTCTAGGTAAACATTGA+AGG + chr6_1:16417991-16418010 Msa0877250:intron 35.0%
! TGCATTTGATGATCAGGATA+GGG + chr6_1:16418104-16418123 Msa0877250:intron 35.0%
GTCATGATAGGATAGGAAAA+TGG - chr6_1:16418206-16418225 None:intergenic 35.0%
AAGGAAAGTCATGATAGGAT+AGG - chr6_1:16418213-16418232 None:intergenic 35.0%
! TGGGTTAGAAATTATCCTGA+TGG + chr6_1:16418258-16418277 Msa0877250:intron 35.0%
GGGTTAGAAATTATCCTGAT+GGG + chr6_1:16418259-16418278 Msa0877250:intron 35.0%
AATGATCTTCTAATCCCATC+AGG - chr6_1:16418276-16418295 None:intergenic 35.0%
GGCAGGATATGATATAAAGT+TGG - chr6_1:16418526-16418545 None:intergenic 35.0%
TGATGGTCAGGATATGTAAT+AGG - chr6_1:16418547-16418566 None:intergenic 35.0%
TACATATCCTGACCATCAAA+CGG + chr6_1:16418549-16418568 Msa0877250:intron 35.0%
GGAAGTTATGGAGCTAAATT+TGG + chr6_1:16418772-16418791 Msa0877250:intron 35.0%
ATTCATTGATGTCACAATGG+GGG - chr6_1:16418977-16418996 None:intergenic 35.0%
CCATGAATAATAGAAGAGAG+AGG - chr6_1:16419035-16419054 None:intergenic 35.0%
CCTCTCTCTTCTATTATTCA+TGG + chr6_1:16419032-16419051 Msa0877250:intron 35.0%
!!! TAATAATTGTTTTGGGGTGC+TGG + chr6_1:16419258-16419277 Msa0877250:intron 35.0%
!!! AATAATTGTTTTGGGGTGCT+GGG + chr6_1:16419259-16419278 Msa0877250:intron 35.0%
AACGAATGATGTATACAGTC+GGG + chr6_1:16419319-16419338 Msa0877250:intron 35.0%
! ATGGTCTTAGTACAAGAAGA+TGG + chr6_1:16419379-16419398 Msa0877250:intron 35.0%
!! AGTACAAGAAGATGGTTTTG+AGG + chr6_1:16419387-16419406 Msa0877250:intron 35.0%
! CCGGTTTAATTAATTTGGGA+CGG - chr6_1:16419503-16419522 None:intergenic 35.0%
CCGTCCCAAATTAATTAAAC+CGG + chr6_1:16419500-16419519 Msa0877250:intron 35.0%
CGTCCCAAATTAATTAAACC+GGG + chr6_1:16419501-16419520 Msa0877250:intron 35.0%
CGTCCCGGTTTAATTAATTT+GGG - chr6_1:16419507-16419526 None:intergenic 35.0%
CCAAATTAATTAAACCGGGA+CGG + chr6_1:16419505-16419524 Msa0877250:intron 35.0%
TTTATGTCGCAAATTTGGGA+CGG + chr6_1:16419596-16419615 Msa0877250:intron 35.0%
! TTTTTGTCGCAAATTTGGGA+CGG + chr6_1:16419627-16419646 Msa0877250:intron 35.0%
!! TTTTTGGTGAATAATGTGGG+CGG + chr6_1:16419721-16419740 Msa0877250:intron 35.0%
TAGTAATGCTTGCAACATCT+TGG + chr6_1:16420177-16420196 Msa0877250:intron 35.0%
GTCTTAAGTGTTACACTTTG+TGG + chr6_1:16420267-16420286 Msa0877250:intron 35.0%
CTTAAGTGTTACACTTTGTG+GGG + chr6_1:16420269-16420288 Msa0877250:intron 35.0%
! TGTTGGACCATTTTATGTAG+AGG - chr6_1:16420510-16420529 None:intergenic 35.0%
ATCAAGGTTGCATGTATACA+GGG + chr6_1:16420849-16420868 Msa0877250:intron 35.0%
!! TAGACTCTAGTTCTACTTTC+TGG + chr6_1:16421015-16421034 Msa0877250:intron 35.0%
TTAGATCGATTGAACTGAGA+AGG - chr6_1:16421258-16421277 None:intergenic 35.0%
TCAGTTTCGTTCCTCAATAT+AGG + chr6_1:16421334-16421353 Msa0877250:intron 35.0%
!! CAGGTTTGTTTTCTATGTTC+AGG + chr6_1:16421690-16421709 Msa0877250:intron 35.0%
GCGTATTATCACTAAAGTCA+CGG - chr6_1:16421731-16421750 None:intergenic 35.0%
ATTGGATTGTAGTCAAGAAG+AGG + chr6_1:16421809-16421828 Msa0877250:intron 35.0%
!! AGTATTGATGATGGAAATGC+AGG + chr6_1:16421897-16421916 Msa0877250:intron 35.0%
TAAGCTTTCAACAAAACCCT+TGG - chr6_1:16421943-16421962 None:intergenic 35.0%
TCAACCAAAAAAGCAGTCAT+AGG - chr6_1:16422078-16422097 None:intergenic 35.0%
AAAAAATTAAGGCCCGTAAG+AGG - chr6_1:16422318-16422337 None:intergenic 35.0%
GTGTAAAACAGTCCTTGATT+TGG + chr6_1:16422448-16422467 Msa0877250:intron 35.0%
! GTAAAACAGTCCTTGATTTG+GGG + chr6_1:16422450-16422469 Msa0877250:intron 35.0%
!! TAAAACAGTCCTTGATTTGG+GGG + chr6_1:16422451-16422470 Msa0877250:intron 35.0%
!! CAGGTTTGTTTTCTATGTTC+AGG + chr6_1:16421690-16421709 Msa0877250:intron 35.0%
TACTGAGTTTGTGAATTTGC+AGG + chr6_1:16422844-16422863 Msa0877250:intron 35.0%
! AAGACAAGGATTTTCCACAT+AGG + chr6_1:16422984-16423003 Msa0877250:CDS 35.0%
!!! GATTTACCCCGGAATTTTTT+AGG - chr6_1:16423016-16423035 None:intergenic 35.0%
AACAGAAACTAGATTTACCC+CGG - chr6_1:16423027-16423046 None:intergenic 35.0%
GTGTCTGTTCAATTAGCAAA+TGG - chr6_1:16423107-16423126 None:intergenic 35.0%
! TGAGTGCCTATTGTTATTCT+TGG + chr6_1:16423390-16423409 Msa0877250:intron 35.0%
!!! TCTACTGGTAGCTACTTTTT+GGG + chr6_1:16423441-16423460 Msa0877250:three_prime_UTR 35.0%
! GCATGGAATTTATTGGTAGT+GGG + chr6_1:16423463-16423482 Msa0877250:three_prime_UTR 35.0%
ATATGCACTGCTTGGATTAT+AGG + chr6_1:16423516-16423535 Msa0877250:three_prime_UTR 35.0%
TATAGGTCATCACAGTAACA+TGG + chr6_1:16423533-16423552 Msa0877250:intron 35.0%
! AAAGCATCTGCATTGAATGA+TGG + chr6_1:16423767-16423786 Msa0877250:intron 35.0%
! GCTCTTTATCATCTCTTTTG+GGG + chr6_1:16423883-16423902 Msa0877250:intron 35.0%
TATTTCACTCGCGAAAAATC+AGG + chr6_1:16416746-16416765 Msa0877250:intron 35.0%
AATAAAAAGAGCGGAAAGAC+GGG - chr6_1:16416782-16416801 None:intergenic 35.0%
CAATAAAAAGAGCGGAAAGA+CGG - chr6_1:16416783-16416802 None:intergenic 35.0%
!!! TAGAGATAATGGGGGATTTT+GGG - chr6_1:16417007-16417026 None:intergenic 35.0%
!!! ATAGAGATAATGGGGGATTT+TGG - chr6_1:16417008-16417027 None:intergenic 35.0%
! CGTAGAATCGTAGATGTTTT+TGG + chr6_1:16417336-16417355 Msa0877250:intron 35.0%
CAATAAGGAACTATATCGCA+TGG + chr6_1:16417864-16417883 Msa0877250:intron 35.0%
GAATTGAAAAAGACGCGTAA+TGG + chr6_1:16417916-16417935 Msa0877250:intron 35.0%
!!! AAGAGTTTTGGATTGTGTCT+AGG + chr6_1:16417978-16417997 Msa0877250:intron 35.0%
TGTGTCTAGGTAAACATTGA+AGG + chr6_1:16417991-16418010 Msa0877250:intron 35.0%
! TGCATTTGATGATCAGGATA+GGG + chr6_1:16418104-16418123 Msa0877250:intron 35.0%
GTCATGATAGGATAGGAAAA+TGG - chr6_1:16418206-16418225 None:intergenic 35.0%
AAGGAAAGTCATGATAGGAT+AGG - chr6_1:16418213-16418232 None:intergenic 35.0%
! TGGGTTAGAAATTATCCTGA+TGG + chr6_1:16418258-16418277 Msa0877250:intron 35.0%
GGGTTAGAAATTATCCTGAT+GGG + chr6_1:16418259-16418278 Msa0877250:intron 35.0%
AATGATCTTCTAATCCCATC+AGG - chr6_1:16418276-16418295 None:intergenic 35.0%
GGCAGGATATGATATAAAGT+TGG - chr6_1:16418526-16418545 None:intergenic 35.0%
TGATGGTCAGGATATGTAAT+AGG - chr6_1:16418547-16418566 None:intergenic 35.0%
TACATATCCTGACCATCAAA+CGG + chr6_1:16418549-16418568 Msa0877250:intron 35.0%
GGAAGTTATGGAGCTAAATT+TGG + chr6_1:16418772-16418791 Msa0877250:intron 35.0%
ATTCATTGATGTCACAATGG+GGG - chr6_1:16418977-16418996 None:intergenic 35.0%
CCATGAATAATAGAAGAGAG+AGG - chr6_1:16419035-16419054 None:intergenic 35.0%
CCTCTCTCTTCTATTATTCA+TGG + chr6_1:16419032-16419051 Msa0877250:intron 35.0%
!!! TAATAATTGTTTTGGGGTGC+TGG + chr6_1:16419258-16419277 Msa0877250:intron 35.0%
!!! AATAATTGTTTTGGGGTGCT+GGG + chr6_1:16419259-16419278 Msa0877250:intron 35.0%
AACGAATGATGTATACAGTC+GGG + chr6_1:16419319-16419338 Msa0877250:intron 35.0%
! ATGGTCTTAGTACAAGAAGA+TGG + chr6_1:16419379-16419398 Msa0877250:intron 35.0%
!! AGTACAAGAAGATGGTTTTG+AGG + chr6_1:16419387-16419406 Msa0877250:intron 35.0%
! CCGGTTTAATTAATTTGGGA+CGG - chr6_1:16419503-16419522 None:intergenic 35.0%
CCGTCCCAAATTAATTAAAC+CGG + chr6_1:16419500-16419519 Msa0877250:intron 35.0%
CGTCCCAAATTAATTAAACC+GGG + chr6_1:16419501-16419520 Msa0877250:intron 35.0%
CGTCCCGGTTTAATTAATTT+GGG - chr6_1:16419507-16419526 None:intergenic 35.0%
CCAAATTAATTAAACCGGGA+CGG + chr6_1:16419505-16419524 Msa0877250:intron 35.0%
TTTATGTCGCAAATTTGGGA+CGG + chr6_1:16419596-16419615 Msa0877250:intron 35.0%
! TTTTTGTCGCAAATTTGGGA+CGG + chr6_1:16419627-16419646 Msa0877250:intron 35.0%
!! TTTTTGGTGAATAATGTGGG+CGG + chr6_1:16419721-16419740 Msa0877250:intron 35.0%
TAGTAATGCTTGCAACATCT+TGG + chr6_1:16420177-16420196 Msa0877250:intron 35.0%
GTCTTAAGTGTTACACTTTG+TGG + chr6_1:16420267-16420286 Msa0877250:intron 35.0%
CTTAAGTGTTACACTTTGTG+GGG + chr6_1:16420269-16420288 Msa0877250:intron 35.0%
! TGTTGGACCATTTTATGTAG+AGG - chr6_1:16420510-16420529 None:intergenic 35.0%
ATCAAGGTTGCATGTATACA+GGG + chr6_1:16420849-16420868 Msa0877250:intron 35.0%
!! TAGACTCTAGTTCTACTTTC+TGG + chr6_1:16421015-16421034 Msa0877250:intron 35.0%
TTAGATCGATTGAACTGAGA+AGG - chr6_1:16421258-16421277 None:intergenic 35.0%
TCAGTTTCGTTCCTCAATAT+AGG + chr6_1:16421334-16421353 Msa0877250:intron 35.0%
!! CAGGTTTGTTTTCTATGTTC+AGG + chr6_1:16421690-16421709 Msa0877250:intron 35.0%
GCGTATTATCACTAAAGTCA+CGG - chr6_1:16421731-16421750 None:intergenic 35.0%
ATTGGATTGTAGTCAAGAAG+AGG + chr6_1:16421809-16421828 Msa0877250:intron 35.0%
!! AGTATTGATGATGGAAATGC+AGG + chr6_1:16421897-16421916 Msa0877250:intron 35.0%
TAAGCTTTCAACAAAACCCT+TGG - chr6_1:16421943-16421962 None:intergenic 35.0%
TCAACCAAAAAAGCAGTCAT+AGG - chr6_1:16422078-16422097 None:intergenic 35.0%
AAAAAATTAAGGCCCGTAAG+AGG - chr6_1:16422318-16422337 None:intergenic 35.0%
GTGTAAAACAGTCCTTGATT+TGG + chr6_1:16422448-16422467 Msa0877250:intron 35.0%
! GTAAAACAGTCCTTGATTTG+GGG + chr6_1:16422450-16422469 Msa0877250:intron 35.0%
!! TAAAACAGTCCTTGATTTGG+GGG + chr6_1:16422451-16422470 Msa0877250:intron 35.0%
!! CAGGTTTGTTTTCTATGTTC+AGG + chr6_1:16421690-16421709 Msa0877250:intron 35.0%
TACTGAGTTTGTGAATTTGC+AGG + chr6_1:16422844-16422863 Msa0877250:intron 35.0%
! AAGACAAGGATTTTCCACAT+AGG + chr6_1:16422984-16423003 Msa0877250:CDS 35.0%
!!! GATTTACCCCGGAATTTTTT+AGG - chr6_1:16423016-16423035 None:intergenic 35.0%
AACAGAAACTAGATTTACCC+CGG - chr6_1:16423027-16423046 None:intergenic 35.0%
GTGTCTGTTCAATTAGCAAA+TGG - chr6_1:16423107-16423126 None:intergenic 35.0%
! TGAGTGCCTATTGTTATTCT+TGG + chr6_1:16423390-16423409 Msa0877250:intron 35.0%
!!! TCTACTGGTAGCTACTTTTT+GGG + chr6_1:16423441-16423460 Msa0877250:three_prime_UTR 35.0%
! GCATGGAATTTATTGGTAGT+GGG + chr6_1:16423463-16423482 Msa0877250:three_prime_UTR 35.0%
ATATGCACTGCTTGGATTAT+AGG + chr6_1:16423516-16423535 Msa0877250:three_prime_UTR 35.0%
TATAGGTCATCACAGTAACA+TGG + chr6_1:16423533-16423552 Msa0877250:intron 35.0%
! AAAGCATCTGCATTGAATGA+TGG + chr6_1:16423767-16423786 Msa0877250:intron 35.0%
! GCTCTTTATCATCTCTTTTG+GGG + chr6_1:16423883-16423902 Msa0877250:intron 35.0%
CGATAGCGCAATAAAAAGAG+CGG - chr6_1:16416791-16416810 None:intergenic 40.0%
TTCTGCACCTACTCTTAACT+TGG + chr6_1:16417376-16417395 Msa0877250:intron 40.0%
! AAAAAGACGCGTAATGGGAA+AGG + chr6_1:16417922-16417941 Msa0877250:intron 40.0%
! TTAGGGTGCATTTGATGATC+AGG + chr6_1:16418098-16418117 Msa0877250:intron 40.0%
! GTGCATTTGATGATCAGGAT+AGG + chr6_1:16418103-16418122 Msa0877250:intron 40.0%
CTCATGTTTGATGCACCAAA+TGG + chr6_1:16418165-16418184 Msa0877250:intron 40.0%
GTTTGATGCACCAAATGGAT+AGG + chr6_1:16418170-16418189 Msa0877250:intron 40.0%
TACTTTAAGCGTCCGTTTGA+TGG - chr6_1:16418564-16418583 None:intergenic 40.0%
TATTGGCAAAAGTCACTGTG+AGG + chr6_1:16418667-16418686 Msa0877250:intron 40.0%
ATTGGCAAAAGTCACTGTGA+GGG + chr6_1:16418668-16418687 Msa0877250:intron 40.0%
TCGATCGGAAATCTATTGAG+TGG + chr6_1:16418751-16418770 Msa0877250:intron 40.0%
GGTGATCCTCTCATAATTTC+TGG + chr6_1:16418829-16418848 Msa0877250:intron 40.0%
! AATTTCTGGATTATGTGGGC+TGG + chr6_1:16418843-16418862 Msa0877250:intron 40.0%
AGTCGTAGACCATCTACAAT+GGG + chr6_1:16418925-16418944 Msa0877250:intron 40.0%
ACCAGTTTAAGCACCCAAAT+GGG + chr6_1:16419342-16419361 Msa0877250:intron 40.0%
CCGTCCCGGTTTAATTAATT+TGG - chr6_1:16419508-16419527 None:intergenic 40.0%
! TTTTGGTGAATAATGTGGGC+GGG + chr6_1:16419722-16419741 Msa0877250:intron 40.0%
AATAATGTGGGCGGGAAAAT+TGG + chr6_1:16419730-16419749 Msa0877250:intron 40.0%
TTGTGCGTATATGGAGGATT+GGG - chr6_1:16419846-16419865 None:intergenic 40.0%
TTTGTGCGTATATGGAGGAT+TGG - chr6_1:16419847-16419866 None:intergenic 40.0%
!! GTGTTTTTGTGCGTATATGG+AGG - chr6_1:16419852-16419871 None:intergenic 40.0%
TTGAGAGAGATCGCGATTTA+GGG - chr6_1:16419909-16419928 None:intergenic 40.0%
TTTGAGAGAGATCGCGATTT+AGG - chr6_1:16419910-16419929 None:intergenic 40.0%
TGATGTCACTGTACAAACAG+TGG + chr6_1:16420381-16420400 Msa0877250:intron 40.0%
GATGTCACTGTACAAACAGT+GGG + chr6_1:16420382-16420401 Msa0877250:intron 40.0%
ATGTCACTGTACAAACAGTG+GGG + chr6_1:16420383-16420402 Msa0877250:intron 40.0%
TCAAATGAAATTGCCACGGA+AGG - chr6_1:16420743-16420762 None:intergenic 40.0%
CATCAAGGTTGCATGTATAC+AGG + chr6_1:16420848-16420867 Msa0877250:intron 40.0%
GAAATTGCACAGAACAGTGA+AGG - chr6_1:16421291-16421310 None:intergenic 40.0%
TCACTGTTCTGTGCAATTTC+AGG + chr6_1:16421291-16421310 Msa0877250:CDS 40.0%
GGAACGAAACTGAGAAAGAA+AGG - chr6_1:16421327-16421346 None:intergenic 40.0%
! TGATGGTGATACACTGCTAT+TGG + chr6_1:16421791-16421810 Msa0877250:intron 40.0%
TTTATGTTGGAGCTTTGCCA+AGG + chr6_1:16421923-16421942 Msa0877250:intron 40.0%
TTATGTTGGAGCTTTGCCAA+GGG + chr6_1:16421924-16421943 Msa0877250:intron 40.0%
!!! CGTTCCTATGACTGCTTTTT+TGG + chr6_1:16422071-16422090 Msa0877250:intron 40.0%
!! AAAACAGTCCTTGATTTGGG+GGG + chr6_1:16422452-16422471 Msa0877250:intron 40.0%
GTGCAACACATTTCTTTGAC+GGG - chr6_1:16422574-16422593 None:intergenic 40.0%
GGTGCAACACATTTCTTTGA+CGG - chr6_1:16422575-16422594 None:intergenic 40.0%
AGAAATGTGTTGCACCACAT+TGG + chr6_1:16422579-16422598 Msa0877250:intron 40.0%
AACGAATTGCTGTAAACACC+CGG - chr6_1:16422618-16422637 None:intergenic 40.0%
TGAGTCTGCATTTAGTGTCT+TGG + chr6_1:16422762-16422781 Msa0877250:intron 40.0%
GAGTCTGCATTTAGTGTCTT+GGG + chr6_1:16422763-16422782 Msa0877250:intron 40.0%
!! GGTTTTATCGCTCTTCAAGA+CGG + chr6_1:16422959-16422978 Msa0877250:CDS 40.0%
TAACTGCCTGTCATGCTTTA+AGG + chr6_1:16423143-16423162 Msa0877250:three_prime_UTR 40.0%
GTTCTTCCTTAAAGCATGAC+AGG - chr6_1:16423152-16423171 None:intergenic 40.0%
AACACATGAGCAATTACCAG+CGG - chr6_1:16423187-16423206 None:intergenic 40.0%
! TAGATGAAAGTTTGATGGGC+TGG + chr6_1:16423320-16423339 Msa0877250:intron 40.0%
!!! CTCTACTGGTAGCTACTTTT+TGG + chr6_1:16423440-16423459 Msa0877250:three_prime_UTR 40.0%
GGCATGGAATTTATTGGTAG+TGG + chr6_1:16423462-16423481 Msa0877250:three_prime_UTR 40.0%
GCAGATGCTTTCACGATTAA+TGG - chr6_1:16423758-16423777 None:intergenic 40.0%
TCAACAATTGTTGGTGTACG+TGG + chr6_1:16423978-16423997 Msa0877250:three_prime_UTR 40.0%
CTAATAACTTCCTCGAGTCT+TGG - chr6_1:16424023-16424042 None:intergenic 40.0%
CGATAGCGCAATAAAAAGAG+CGG - chr6_1:16416791-16416810 None:intergenic 40.0%
TTCTGCACCTACTCTTAACT+TGG + chr6_1:16417376-16417395 Msa0877250:intron 40.0%
! AAAAAGACGCGTAATGGGAA+AGG + chr6_1:16417922-16417941 Msa0877250:intron 40.0%
! TTAGGGTGCATTTGATGATC+AGG + chr6_1:16418098-16418117 Msa0877250:intron 40.0%
! GTGCATTTGATGATCAGGAT+AGG + chr6_1:16418103-16418122 Msa0877250:intron 40.0%
CTCATGTTTGATGCACCAAA+TGG + chr6_1:16418165-16418184 Msa0877250:intron 40.0%
GTTTGATGCACCAAATGGAT+AGG + chr6_1:16418170-16418189 Msa0877250:intron 40.0%
TACTTTAAGCGTCCGTTTGA+TGG - chr6_1:16418564-16418583 None:intergenic 40.0%
TATTGGCAAAAGTCACTGTG+AGG + chr6_1:16418667-16418686 Msa0877250:intron 40.0%
ATTGGCAAAAGTCACTGTGA+GGG + chr6_1:16418668-16418687 Msa0877250:intron 40.0%
TCGATCGGAAATCTATTGAG+TGG + chr6_1:16418751-16418770 Msa0877250:intron 40.0%
GGTGATCCTCTCATAATTTC+TGG + chr6_1:16418829-16418848 Msa0877250:intron 40.0%
! AATTTCTGGATTATGTGGGC+TGG + chr6_1:16418843-16418862 Msa0877250:intron 40.0%
AGTCGTAGACCATCTACAAT+GGG + chr6_1:16418925-16418944 Msa0877250:intron 40.0%
ACCAGTTTAAGCACCCAAAT+GGG + chr6_1:16419342-16419361 Msa0877250:intron 40.0%
CCGTCCCGGTTTAATTAATT+TGG - chr6_1:16419508-16419527 None:intergenic 40.0%
! TTTTGGTGAATAATGTGGGC+GGG + chr6_1:16419722-16419741 Msa0877250:intron 40.0%
AATAATGTGGGCGGGAAAAT+TGG + chr6_1:16419730-16419749 Msa0877250:intron 40.0%
TTGTGCGTATATGGAGGATT+GGG - chr6_1:16419846-16419865 None:intergenic 40.0%
TTTGTGCGTATATGGAGGAT+TGG - chr6_1:16419847-16419866 None:intergenic 40.0%
!! GTGTTTTTGTGCGTATATGG+AGG - chr6_1:16419852-16419871 None:intergenic 40.0%
TTGAGAGAGATCGCGATTTA+GGG - chr6_1:16419909-16419928 None:intergenic 40.0%
TTTGAGAGAGATCGCGATTT+AGG - chr6_1:16419910-16419929 None:intergenic 40.0%
TGATGTCACTGTACAAACAG+TGG + chr6_1:16420381-16420400 Msa0877250:intron 40.0%
GATGTCACTGTACAAACAGT+GGG + chr6_1:16420382-16420401 Msa0877250:intron 40.0%
ATGTCACTGTACAAACAGTG+GGG + chr6_1:16420383-16420402 Msa0877250:intron 40.0%
TCAAATGAAATTGCCACGGA+AGG - chr6_1:16420743-16420762 None:intergenic 40.0%
CATCAAGGTTGCATGTATAC+AGG + chr6_1:16420848-16420867 Msa0877250:intron 40.0%
GAAATTGCACAGAACAGTGA+AGG - chr6_1:16421291-16421310 None:intergenic 40.0%
TCACTGTTCTGTGCAATTTC+AGG + chr6_1:16421291-16421310 Msa0877250:CDS 40.0%
GGAACGAAACTGAGAAAGAA+AGG - chr6_1:16421327-16421346 None:intergenic 40.0%
! TGATGGTGATACACTGCTAT+TGG + chr6_1:16421791-16421810 Msa0877250:intron 40.0%
TTTATGTTGGAGCTTTGCCA+AGG + chr6_1:16421923-16421942 Msa0877250:intron 40.0%
TTATGTTGGAGCTTTGCCAA+GGG + chr6_1:16421924-16421943 Msa0877250:intron 40.0%
!!! CGTTCCTATGACTGCTTTTT+TGG + chr6_1:16422071-16422090 Msa0877250:intron 40.0%
!! AAAACAGTCCTTGATTTGGG+GGG + chr6_1:16422452-16422471 Msa0877250:intron 40.0%
GTGCAACACATTTCTTTGAC+GGG - chr6_1:16422574-16422593 None:intergenic 40.0%
GGTGCAACACATTTCTTTGA+CGG - chr6_1:16422575-16422594 None:intergenic 40.0%
AGAAATGTGTTGCACCACAT+TGG + chr6_1:16422579-16422598 Msa0877250:intron 40.0%
AACGAATTGCTGTAAACACC+CGG - chr6_1:16422618-16422637 None:intergenic 40.0%
TGAGTCTGCATTTAGTGTCT+TGG + chr6_1:16422762-16422781 Msa0877250:intron 40.0%
GAGTCTGCATTTAGTGTCTT+GGG + chr6_1:16422763-16422782 Msa0877250:intron 40.0%
!! GGTTTTATCGCTCTTCAAGA+CGG + chr6_1:16422959-16422978 Msa0877250:CDS 40.0%
TAACTGCCTGTCATGCTTTA+AGG + chr6_1:16423143-16423162 Msa0877250:three_prime_UTR 40.0%
GTTCTTCCTTAAAGCATGAC+AGG - chr6_1:16423152-16423171 None:intergenic 40.0%
AACACATGAGCAATTACCAG+CGG - chr6_1:16423187-16423206 None:intergenic 40.0%
! TAGATGAAAGTTTGATGGGC+TGG + chr6_1:16423320-16423339 Msa0877250:intron 40.0%
!!! CTCTACTGGTAGCTACTTTT+TGG + chr6_1:16423440-16423459 Msa0877250:three_prime_UTR 40.0%
GGCATGGAATTTATTGGTAG+TGG + chr6_1:16423462-16423481 Msa0877250:three_prime_UTR 40.0%
GCAGATGCTTTCACGATTAA+TGG - chr6_1:16423758-16423777 None:intergenic 40.0%
TCAACAATTGTTGGTGTACG+TGG + chr6_1:16423978-16423997 Msa0877250:three_prime_UTR 40.0%
CTAATAACTTCCTCGAGTCT+TGG - chr6_1:16424023-16424042 None:intergenic 40.0%
CATCAAATGCACCCTAAGTC+TGG - chr6_1:16418095-16418114 None:intergenic 45.0%
GGTCAGGATATGTAATAGGC+AGG - chr6_1:16418543-16418562 None:intergenic 45.0%
GGCTGGTGTACTATGAATCA+TGG + chr6_1:16418860-16418879 Msa0877250:intron 45.0%
GAGTCGTAGACCATCTACAA+TGG + chr6_1:16418924-16418943 Msa0877250:intron 45.0%
GTCGTAGACCATCTACAATG+GGG + chr6_1:16418926-16418945 Msa0877250:intron 45.0%
GACCAGTTTAAGCACCCAAA+TGG + chr6_1:16419341-16419360 Msa0877250:intron 45.0%
CCAGTTTAAGCACCCAAATG+GGG + chr6_1:16419343-16419362 Msa0877250:intron 45.0%
ATTAAGACGGAACGTCGTGA+CGG + chr6_1:16419467-16419486 Msa0877250:intron 45.0%
AGAGTGAGGGATGGAGTTTA+GGG - chr6_1:16419985-16420004 None:intergenic 45.0%
!!! TTTTTGAGGCCCGTCGTTTT+GGG - chr6_1:16420917-16420936 None:intergenic 45.0%
!!! TTTTTTGAGGCCCGTCGTTT+TGG - chr6_1:16420918-16420937 None:intergenic 45.0%
AGAAAGCAACTGGACTGAGA+AGG - chr6_1:16421235-16421254 None:intergenic 45.0%
ACTGAGAAGGAGAAAGCAAC+TGG - chr6_1:16421245-16421264 None:intergenic 45.0%
GATCATAGAGTTGAGCGAAC+AGG + chr6_1:16421855-16421874 Msa0877250:intron 45.0%
TGTATTGTCCCCCCAAATCA+AGG - chr6_1:16422463-16422482 None:intergenic 45.0%
GCAGGATATCTCAACCAATG+TGG - chr6_1:16422596-16422615 None:intergenic 45.0%
! CATTGGTTGAGATATCCTGC+CGG + chr6_1:16422596-16422615 Msa0877250:intron 45.0%
ATTGGTTGAGATATCCTGCC+GGG + chr6_1:16422597-16422616 Msa0877250:intron 45.0%
TCTTCAAGACGGAGAAGACA+AGG + chr6_1:16422970-16422989 Msa0877250:CDS 45.0%
ATAGGCACTCACACACTAGT+TGG - chr6_1:16423381-16423400 None:intergenic 45.0%
! TAGCGAGCTTGTTTCTCTAC+TGG + chr6_1:16423426-16423445 Msa0877250:intron 45.0%
!!! TGGTAGCTACTTTTTGGGCA+TGG + chr6_1:16423446-16423465 Msa0877250:three_prime_UTR 45.0%
!! CTAGTTGTCCTTTTGGTGAC+AGG + chr6_1:16423609-16423628 Msa0877250:intron 45.0%
ACAGGAGCTGAAGTAGAGAA+AGG + chr6_1:16423627-16423646 Msa0877250:intron 45.0%
ATAACTTCCTCGAGTCTTGG+CGG - chr6_1:16424020-16424039 None:intergenic 45.0%
CATCAAATGCACCCTAAGTC+TGG - chr6_1:16418095-16418114 None:intergenic 45.0%
GGTCAGGATATGTAATAGGC+AGG - chr6_1:16418543-16418562 None:intergenic 45.0%
GGCTGGTGTACTATGAATCA+TGG + chr6_1:16418860-16418879 Msa0877250:intron 45.0%
GAGTCGTAGACCATCTACAA+TGG + chr6_1:16418924-16418943 Msa0877250:intron 45.0%
GTCGTAGACCATCTACAATG+GGG + chr6_1:16418926-16418945 Msa0877250:intron 45.0%
GACCAGTTTAAGCACCCAAA+TGG + chr6_1:16419341-16419360 Msa0877250:intron 45.0%
CCAGTTTAAGCACCCAAATG+GGG + chr6_1:16419343-16419362 Msa0877250:intron 45.0%
ATTAAGACGGAACGTCGTGA+CGG + chr6_1:16419467-16419486 Msa0877250:intron 45.0%
AGAGTGAGGGATGGAGTTTA+GGG - chr6_1:16419985-16420004 None:intergenic 45.0%
!!! TTTTTGAGGCCCGTCGTTTT+GGG - chr6_1:16420917-16420936 None:intergenic 45.0%
!!! TTTTTTGAGGCCCGTCGTTT+TGG - chr6_1:16420918-16420937 None:intergenic 45.0%
AGAAAGCAACTGGACTGAGA+AGG - chr6_1:16421235-16421254 None:intergenic 45.0%
ACTGAGAAGGAGAAAGCAAC+TGG - chr6_1:16421245-16421264 None:intergenic 45.0%
GATCATAGAGTTGAGCGAAC+AGG + chr6_1:16421855-16421874 Msa0877250:intron 45.0%
TGTATTGTCCCCCCAAATCA+AGG - chr6_1:16422463-16422482 None:intergenic 45.0%
GCAGGATATCTCAACCAATG+TGG - chr6_1:16422596-16422615 None:intergenic 45.0%
! CATTGGTTGAGATATCCTGC+CGG + chr6_1:16422596-16422615 Msa0877250:intron 45.0%
ATTGGTTGAGATATCCTGCC+GGG + chr6_1:16422597-16422616 Msa0877250:intron 45.0%
TCTTCAAGACGGAGAAGACA+AGG + chr6_1:16422970-16422989 Msa0877250:CDS 45.0%
ATAGGCACTCACACACTAGT+TGG - chr6_1:16423381-16423400 None:intergenic 45.0%
! TAGCGAGCTTGTTTCTCTAC+TGG + chr6_1:16423426-16423445 Msa0877250:intron 45.0%
!!! TGGTAGCTACTTTTTGGGCA+TGG + chr6_1:16423446-16423465 Msa0877250:three_prime_UTR 45.0%
!! CTAGTTGTCCTTTTGGTGAC+AGG + chr6_1:16423609-16423628 Msa0877250:intron 45.0%
ACAGGAGCTGAAGTAGAGAA+AGG + chr6_1:16423627-16423646 Msa0877250:intron 45.0%
ATAACTTCCTCGAGTCTTGG+CGG - chr6_1:16424020-16424039 None:intergenic 45.0%
!!! TTTATTTTTTGAAATAAAAT+GGG - chr6_1:16419216-16419235 None:intergenic 5.0%
!!! TTTTATTTTTTGAAATAAAA+TGG - chr6_1:16419217-16419236 None:intergenic 5.0%
!! AAAAATAAAATAATTATTGT+TGG + chr6_1:16419227-16419246 Msa0877250:intron 5.0%
!! AAAATAAAATAATTATTGTT+GGG + chr6_1:16419228-16419247 Msa0877250:intron 5.0%
!! ATAAAGTTAAATAAAAATAT+AGG + chr6_1:16419812-16419831 Msa0877250:intron 5.0%
!! TAAAGTTAAATAAAAATATA+GGG + chr6_1:16419813-16419832 Msa0877250:intron 5.0%
!!! TTTATTTTTTGAAATAAAAT+GGG - chr6_1:16419216-16419235 None:intergenic 5.0%
!!! TTTTATTTTTTGAAATAAAA+TGG - chr6_1:16419217-16419236 None:intergenic 5.0%
!! AAAAATAAAATAATTATTGT+TGG + chr6_1:16419227-16419246 Msa0877250:intron 5.0%
!! AAAATAAAATAATTATTGTT+GGG + chr6_1:16419228-16419247 Msa0877250:intron 5.0%
!! ATAAAGTTAAATAAAAATAT+AGG + chr6_1:16419812-16419831 Msa0877250:intron 5.0%
!! TAAAGTTAAATAAAAATATA+GGG + chr6_1:16419813-16419832 Msa0877250:intron 5.0%
! ACCGAGATCTGAGATGCACA+TGG + chr6_1:16416657-16416676 Msa0877250:intron 50.0%
CCCATGTGCATCTCAGATCT+CGG - chr6_1:16416661-16416680 None:intergenic 50.0%
! CCGAGATCTGAGATGCACAT+GGG + chr6_1:16416658-16416677 Msa0877250:intron 50.0%
GATGCACATGGGAATGCTAG+TGG + chr6_1:16416669-16416688 Msa0877250:intron 50.0%
GATGATCAGGATAGGGAGAC+AGG + chr6_1:16418111-16418130 Msa0877250:intron 50.0%
! TAAGCGTCCGTTTGATGGTC+AGG - chr6_1:16418559-16418578 None:intergenic 50.0%
TCCTTCCCCTATTTAGCACC+AGG + chr6_1:16418949-16418968 Msa0877250:intron 50.0%
!!! ATTGTTTTGGGGTGCTGGGT+TGG + chr6_1:16419263-16419282 Msa0877250:intron 50.0%
CCCCATTTGGGTGCTTAAAC+TGG - chr6_1:16419346-16419365 None:intergenic 50.0%
CACAATGCAGCACCCCATTT+GGG - chr6_1:16419358-16419377 None:intergenic 50.0%
GAGAGTGAGGGATGGAGTTT+AGG - chr6_1:16419986-16420005 None:intergenic 50.0%
TCGAACATCTCTTCCTTCCG+TGG + chr6_1:16420727-16420746 Msa0877250:intron 50.0%
AGGTTGCATGTATACAGGGC+CGG + chr6_1:16420853-16420872 Msa0877250:intron 50.0%
AGAACCTCTTGCACTCCCTA+GGG - chr6_1:16420880-16420899 None:intergenic 50.0%
TAGAACCTCTTGCACTCCCT+AGG - chr6_1:16420881-16420900 None:intergenic 50.0%
GACAAACAGCCTGCCTCTTA+CGG + chr6_1:16422302-16422321 Msa0877250:intron 50.0%
ACAAACAGCCTGCCTCTTAC+GGG + chr6_1:16422303-16422322 Msa0877250:intron 50.0%
AATTAAGGCCCGTAAGAGGC+AGG - chr6_1:16422314-16422333 None:intergenic 50.0%
!! GTGTTTCTGGAACTGGCATG+TGG + chr6_1:16422525-16422544 Msa0877250:intron 50.0%
AATTGCTGTAAACACCCGGC+AGG - chr6_1:16422614-16422633 None:intergenic 50.0%
!! TTGGTAGTGGGCATGCGTTA+TGG + chr6_1:16423475-16423494 Msa0877250:three_prime_UTR 50.0%
!! TGGTAGTGGGCATGCGTTAT+GGG + chr6_1:16423476-16423495 Msa0877250:three_prime_UTR 50.0%
AGGCATGGATATGCACTGCT+TGG + chr6_1:16423508-16423527 Msa0877250:three_prime_UTR 50.0%
CTTCAGCTCCTGTCACCAAA+AGG - chr6_1:16423620-16423639 None:intergenic 50.0%
! ACCGAGATCTGAGATGCACA+TGG + chr6_1:16416657-16416676 Msa0877250:intron 50.0%
CCCATGTGCATCTCAGATCT+CGG - chr6_1:16416661-16416680 None:intergenic 50.0%
! CCGAGATCTGAGATGCACAT+GGG + chr6_1:16416658-16416677 Msa0877250:intron 50.0%
GATGCACATGGGAATGCTAG+TGG + chr6_1:16416669-16416688 Msa0877250:intron 50.0%
GATGATCAGGATAGGGAGAC+AGG + chr6_1:16418111-16418130 Msa0877250:intron 50.0%
! TAAGCGTCCGTTTGATGGTC+AGG - chr6_1:16418559-16418578 None:intergenic 50.0%
TCCTTCCCCTATTTAGCACC+AGG + chr6_1:16418949-16418968 Msa0877250:intron 50.0%
!!! ATTGTTTTGGGGTGCTGGGT+TGG + chr6_1:16419263-16419282 Msa0877250:intron 50.0%
CCCCATTTGGGTGCTTAAAC+TGG - chr6_1:16419346-16419365 None:intergenic 50.0%
CACAATGCAGCACCCCATTT+GGG - chr6_1:16419358-16419377 None:intergenic 50.0%
GAGAGTGAGGGATGGAGTTT+AGG - chr6_1:16419986-16420005 None:intergenic 50.0%
TCGAACATCTCTTCCTTCCG+TGG + chr6_1:16420727-16420746 Msa0877250:intron 50.0%
AGGTTGCATGTATACAGGGC+CGG + chr6_1:16420853-16420872 Msa0877250:intron 50.0%
AGAACCTCTTGCACTCCCTA+GGG - chr6_1:16420880-16420899 None:intergenic 50.0%
TAGAACCTCTTGCACTCCCT+AGG - chr6_1:16420881-16420900 None:intergenic 50.0%
GACAAACAGCCTGCCTCTTA+CGG + chr6_1:16422302-16422321 Msa0877250:intron 50.0%
ACAAACAGCCTGCCTCTTAC+GGG + chr6_1:16422303-16422322 Msa0877250:intron 50.0%
AATTAAGGCCCGTAAGAGGC+AGG - chr6_1:16422314-16422333 None:intergenic 50.0%
!! GTGTTTCTGGAACTGGCATG+TGG + chr6_1:16422525-16422544 Msa0877250:intron 50.0%
AATTGCTGTAAACACCCGGC+AGG - chr6_1:16422614-16422633 None:intergenic 50.0%
!! TTGGTAGTGGGCATGCGTTA+TGG + chr6_1:16423475-16423494 Msa0877250:three_prime_UTR 50.0%
!! TGGTAGTGGGCATGCGTTAT+GGG + chr6_1:16423476-16423495 Msa0877250:three_prime_UTR 50.0%
AGGCATGGATATGCACTGCT+TGG + chr6_1:16423508-16423527 Msa0877250:three_prime_UTR 50.0%
CTTCAGCTCCTGTCACCAAA+AGG - chr6_1:16423620-16423639 None:intergenic 50.0%
GGGAAGGACCCCATTGTAGA+TGG - chr6_1:16418937-16418956 None:intergenic 55.0%
! GCCTGGTGCTAAATAGGGGA+AGG - chr6_1:16418953-16418972 None:intergenic 55.0%
! GGGTGCCTGGTGCTAAATAG+GGG - chr6_1:16418957-16418976 None:intergenic 55.0%
! GGGGTGCCTGGTGCTAAATA+GGG - chr6_1:16418958-16418977 None:intergenic 55.0%
CCACAATGCAGCACCCCATT+TGG - chr6_1:16419359-16419378 None:intergenic 55.0%
!! CCAAATGGGGTGCTGCATTG+TGG + chr6_1:16419356-16419375 Msa0877250:intron 55.0%
!! ATGGGGTGCTGCATTGTGGA+TGG + chr6_1:16419360-16419379 Msa0877250:intron 55.0%
! AAGCGTCGCAAATTCCGTCC+CGG - chr6_1:16419522-16419541 None:intergenic 55.0%
AACCGAGCCTCCCAAAACGA+CGG + chr6_1:16420904-16420923 Msa0877250:intron 55.0%
!! TTCTGGAACTGGCATGTGGC+AGG + chr6_1:16422529-16422548 Msa0877250:intron 55.0%
! TCTGGAACTGGCATGTGGCA+GGG + chr6_1:16422530-16422549 Msa0877250:intron 55.0%
GAACTATCCTCATGCTCCGC+TGG + chr6_1:16423168-16423187 Msa0877250:three_prime_UTR 55.0%
GCAATTACCAGCGGAGCATG+AGG - chr6_1:16423178-16423197 None:intergenic 55.0%
!! GGTAGTGGGCATGCGTTATG+GGG + chr6_1:16423477-16423496 Msa0877250:three_prime_UTR 55.0%
GGGAAGGACCCCATTGTAGA+TGG - chr6_1:16418937-16418956 None:intergenic 55.0%
! GCCTGGTGCTAAATAGGGGA+AGG - chr6_1:16418953-16418972 None:intergenic 55.0%
! GGGTGCCTGGTGCTAAATAG+GGG - chr6_1:16418957-16418976 None:intergenic 55.0%
! GGGGTGCCTGGTGCTAAATA+GGG - chr6_1:16418958-16418977 None:intergenic 55.0%
CCACAATGCAGCACCCCATT+TGG - chr6_1:16419359-16419378 None:intergenic 55.0%
!! CCAAATGGGGTGCTGCATTG+TGG + chr6_1:16419356-16419375 Msa0877250:intron 55.0%
!! ATGGGGTGCTGCATTGTGGA+TGG + chr6_1:16419360-16419379 Msa0877250:intron 55.0%
! AAGCGTCGCAAATTCCGTCC+CGG - chr6_1:16419522-16419541 None:intergenic 55.0%
AACCGAGCCTCCCAAAACGA+CGG + chr6_1:16420904-16420923 Msa0877250:intron 55.0%
!! TTCTGGAACTGGCATGTGGC+AGG + chr6_1:16422529-16422548 Msa0877250:intron 55.0%
! TCTGGAACTGGCATGTGGCA+GGG + chr6_1:16422530-16422549 Msa0877250:intron 55.0%
GAACTATCCTCATGCTCCGC+TGG + chr6_1:16423168-16423187 Msa0877250:three_prime_UTR 55.0%
GCAATTACCAGCGGAGCATG+AGG - chr6_1:16423178-16423197 None:intergenic 55.0%
!! GGTAGTGGGCATGCGTTATG+GGG + chr6_1:16423477-16423496 Msa0877250:three_prime_UTR 55.0%
!! GGGGGTGCCTGGTGCTAAAT+AGG - chr6_1:16418959-16418978 None:intergenic 60.0%
!! GATGTCACAATGGGGGTGCC+TGG - chr6_1:16418970-16418989 None:intergenic 60.0%
TGTATACAGGGCCGGACCCT+AGG + chr6_1:16420861-16420880 Msa0877250:intron 60.0%
GTATACAGGGCCGGACCCTA+GGG + chr6_1:16420862-16420881 Msa0877250:intron 60.0%
CTCTTGCACTCCCTAGGGTC+CGG - chr6_1:16420875-16420894 None:intergenic 60.0%
ACCGAGCCTCCCAAAACGAC+GGG + chr6_1:16420905-16420924 Msa0877250:intron 60.0%
!! TTGAGGCCCGTCGTTTTGGG+AGG - chr6_1:16420914-16420933 None:intergenic 60.0%
CTGGAACTGGCATGTGGCAG+GGG + chr6_1:16422531-16422550 Msa0877250:intron 60.0%
! TGCGTTATGGGGCTGGTGTG+AGG + chr6_1:16423488-16423507 Msa0877250:three_prime_UTR 60.0%
! TATGGGGCTGGTGTGAGGCA+TGG + chr6_1:16423493-16423512 Msa0877250:three_prime_UTR 60.0%
TTCAGCACCGCCAAGACTCG+AGG + chr6_1:16424010-16424029 Msa0877250:three_prime_UTR 60.0%
!! GGGGGTGCCTGGTGCTAAAT+AGG - chr6_1:16418959-16418978 None:intergenic 60.0%
!! GATGTCACAATGGGGGTGCC+TGG - chr6_1:16418970-16418989 None:intergenic 60.0%
TGTATACAGGGCCGGACCCT+AGG + chr6_1:16420861-16420880 Msa0877250:intron 60.0%
GTATACAGGGCCGGACCCTA+GGG + chr6_1:16420862-16420881 Msa0877250:intron 60.0%
CTCTTGCACTCCCTAGGGTC+CGG - chr6_1:16420875-16420894 None:intergenic 60.0%
ACCGAGCCTCCCAAAACGAC+GGG + chr6_1:16420905-16420924 Msa0877250:intron 60.0%
!! TTGAGGCCCGTCGTTTTGGG+AGG - chr6_1:16420914-16420933 None:intergenic 60.0%
CTGGAACTGGCATGTGGCAG+GGG + chr6_1:16422531-16422550 Msa0877250:intron 60.0%
! TGCGTTATGGGGCTGGTGTG+AGG + chr6_1:16423488-16423507 Msa0877250:three_prime_UTR 60.0%
! TATGGGGCTGGTGTGAGGCA+TGG + chr6_1:16423493-16423512 Msa0877250:three_prime_UTR 60.0%
TTCAGCACCGCCAAGACTCG+AGG + chr6_1:16424010-16424029 Msa0877250:three_prime_UTR 60.0%
! CGGACCCTAGGGAGTGCAAG+AGG + chr6_1:16420873-16420892 Msa0877250:intron 65.0%
!!! GCCCGTCGTTTTGGGAGGCT+CGG - chr6_1:16420909-16420928 None:intergenic 65.0%
GTGGGCATGCGTTATGGGGC+TGG + chr6_1:16423481-16423500 Msa0877250:three_prime_UTR 65.0%
! CGGACCCTAGGGAGTGCAAG+AGG + chr6_1:16420873-16420892 Msa0877250:intron 65.0%
!!! GCCCGTCGTTTTGGGAGGCT+CGG - chr6_1:16420909-16420928 None:intergenic 65.0%
GTGGGCATGCGTTATGGGGC+TGG + chr6_1:16423481-16423500 Msa0877250:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 16416596 16424276 16416596 ID=Msa0877250;Name=Msa0877250
chr6_1 mRNA 16416596 16424276 16416596 ID=Msa0877250-mRNA-1;Parent=Msa0877250;Name=Msa0877250-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.66|0.71|0.85|0|0.28|7|587|72
chr6_1 exon 16416596 16416600 16416596 ID=Msa0877250-mRNA-1:exon:4607;Parent=Msa0877250-mRNA-1
chr6_1 exon 16421246 16421312 16421246 ID=Msa0877250-mRNA-1:exon:4608;Parent=Msa0877250-mRNA-1
chr6_1 exon 16422866 16423028 16422866 ID=Msa0877250-mRNA-1:exon:4609;Parent=Msa0877250-mRNA-1
chr6_1 exon 16423123 16423189 16423123 ID=Msa0877250-mRNA-1:exon:4610;Parent=Msa0877250-mRNA-1
chr6_1 exon 16423429 16423537 16423429 ID=Msa0877250-mRNA-1:exon:4611;Parent=Msa0877250-mRNA-1
chr6_1 exon 16423631 16423697 16423631 ID=Msa0877250-mRNA-1:exon:4612;Parent=Msa0877250-mRNA-1
chr6_1 exon 16423949 16424276 16423949 ID=Msa0877250-mRNA-1:exon:4613;Parent=Msa0877250-mRNA-1
chr6_1 CDS 16416596 16416600 16416596 ID=Msa0877250-mRNA-1:cds;Parent=Msa0877250-mRNA-1
chr6_1 CDS 16421246 16421312 16421246 ID=Msa0877250-mRNA-1:cds;Parent=Msa0877250-mRNA-1
chr6_1 CDS 16422866 16423012 16422866 ID=Msa0877250-mRNA-1:cds;Parent=Msa0877250-mRNA-1
chr6_1 three_prime_UTR 16423013 16423028 16423013 ID=Msa0877250-mRNA-1:three_prime_utr;Parent=Msa0877250-mRNA-1
chr6_1 three_prime_UTR 16423123 16423189 16423123 ID=Msa0877250-mRNA-1:three_prime_utr;Parent=Msa0877250-mRNA-1
chr6_1 three_prime_UTR 16423429 16423537 16423429 ID=Msa0877250-mRNA-1:three_prime_utr;Parent=Msa0877250-mRNA-1
chr6_1 three_prime_UTR 16423631 16423697 16423631 ID=Msa0877250-mRNA-1:three_prime_utr;Parent=Msa0877250-mRNA-1
chr6_1 three_prime_UTR 16423949 16424276 16423949 ID=Msa0877250-mRNA-1:three_prime_utr;Parent=Msa0877250-mRNA-1
Gene Sequence

>Msa0877250

ATGAATTGCTTTCTCCTTCTCAGTTCAATCGATCTAAATCGCTCTCTCCTTCACTGTTCTGTGCAATTTCAGGAGTTAACGTTTAATGCGTCTTTGACAGTTATGAAAATGTTGAAGGATTTAGAGAGAACTGAAGTTTGTGATTCTTTGTTAACGATTTTGATGGGTTTTATCGCTCTTCAAGACGGAGAAGACAAGGATTTTCCACATAGGAACTAA

Protein sequence

>Msa0877250

MNCFLLLSSIDLNRSLLHCSVQFQELTFNASLTVMKMLKDLERTEVCDSLLTILMGFIALQDGEDKDFPHRN*