Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009070 | GAU49407.1 | 45.070 | 355 | 168 | 7 | 86 | 422 | 43 | 388 | 2.16e-82 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009070 | A0A2Z6PS77 | 45.070 | 355 | 168 | 7 | 86 | 422 | 43 | 388 | 1.03e-82 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037880 | Msa1009070 | 0.800078 | 1.706024e-48 | -8.615850e-47 |
| Msa0115270 | Msa1009070 | 0.812559 | 3.988765e-51 | -8.615850e-47 |
| Msa0632930 | Msa1009070 | 0.817926 | 2.559044e-52 | -8.615850e-47 |
| Msa0672690 | Msa1009070 | 0.805192 | 1.503325e-49 | -8.615850e-47 |
| Msa0701010 | Msa1009070 | 0.820375 | 7.090740e-53 | -8.615850e-47 |
| Msa0748970 | Msa1009070 | 0.815977 | 7.011688e-52 | -8.615850e-47 |
| Msa0768290 | Msa1009070 | 0.819025 | 1.442229e-52 | -8.615850e-47 |
| Msa0768370 | Msa1009070 | 0.807457 | 5.006891e-50 | -8.615850e-47 |
| Msa0150840 | Msa1009070 | 0.804893 | 1.736057e-49 | -8.615850e-47 |
| Msa0170220 | Msa1009070 | 0.803681 | 3.104126e-49 | -8.615850e-47 |
| Msa0180500 | Msa1009070 | 0.817700 | 2.878603e-52 | -8.615850e-47 |
| Msa0422100 | Msa1009070 | 0.802673 | 5.017082e-49 | -8.615850e-47 |
| Msa0424320 | Msa1009070 | 0.800405 | 1.463697e-48 | -8.615850e-47 |
| Msa0434000 | Msa1009070 | 0.806991 | 6.284959e-50 | -8.615850e-47 |
| Msa0461160 | Msa1009070 | 0.892582 | 1.389440e-74 | -8.615850e-47 |
| Msa0467640 | Msa1009070 | -0.806706 | 7.223122e-50 | -8.615850e-47 |
| Msa0998690 | Msa1009070 | 0.812117 | 4.981579e-51 | -8.615850e-47 |
| Msa1000890 | Msa1009070 | 0.806023 | 1.005952e-49 | -8.615850e-47 |
| Msa1000900 | Msa1009070 | 0.815010 | 1.150480e-51 | -8.615850e-47 |
| Msa1009070 | Msa1012830 | 0.807375 | 5.213089e-50 | -8.615850e-47 |
| Msa1009070 | Msa1118330 | 0.801513 | 8.690578e-49 | -8.615850e-47 |
| Msa1009070 | Msa1137570 | 0.804018 | 2.641768e-49 | -8.615850e-47 |
| Msa1009070 | Msa1276890 | 0.827593 | 1.435896e-54 | -8.615850e-47 |
| Msa1009070 | Msa1282580 | -0.804408 | 2.191365e-49 | -8.615850e-47 |
| Msa1009070 | Msa1296280 | 0.804428 | 2.170549e-49 | -8.615850e-47 |
| Msa1009070 | Msa1366970 | 0.814294 | 1.657629e-51 | -8.615850e-47 |
| Msa1009070 | Msa1395900 | 0.819906 | 9.078354e-53 | -8.615850e-47 |
| Msa1009070 | Msa1412530 | 0.814298 | 1.654752e-51 | -8.615850e-47 |
| Msa1009070 | Msa1458750 | 0.825984 | 3.478688e-54 | -8.615850e-47 |
| Msa0251640 | Msa1009070 | 0.809819 | 1.566853e-50 | -8.615850e-47 |
| Msa0317290 | Msa1009070 | 0.806022 | 1.006589e-49 | -8.615850e-47 |
| Msa0342750 | Msa1009070 | 0.810339 | 1.210569e-50 | -8.615850e-47 |
| Msa0490140 | Msa1009070 | 0.812051 | 5.149092e-51 | -8.615850e-47 |
| Msa0498650 | Msa1009070 | 0.804081 | 2.563043e-49 | -8.615850e-47 |
| Msa0510940 | Msa1009070 | 0.808231 | 3.428133e-50 | -8.615850e-47 |
| Msa0514070 | Msa1009070 | -0.804484 | 2.112860e-49 | -8.615850e-47 |
| Msa0523940 | Msa1009070 | 0.808421 | 3.123363e-50 | -8.615850e-47 |
| Msa0585230 | Msa1009070 | 0.819103 | 1.384706e-52 | -8.615850e-47 |
| Msa0849030 | Msa1009070 | 0.807997 | 3.845977e-50 | -8.615850e-47 |
| Msa0877250 | Msa1009070 | 0.822983 | 1.768554e-53 | -8.615850e-47 |
| Msa0907950 | Msa1009070 | 0.822852 | 1.897190e-53 | -8.615850e-47 |
| Msa0907960 | Msa1009070 | 0.802041 | 6.771259e-49 | -8.615850e-47 |
| Msa0927380 | Msa1009070 | 0.803260 | 3.794669e-49 | -8.615850e-47 |
| Msa0931520 | Msa1009070 | 0.811459 | 6.926814e-51 | -8.615850e-47 |
| Msa0936300 | Msa1009070 | 0.827580 | 1.446096e-54 | -8.615850e-47 |
| Msa0953120 | Msa1009070 | 0.804098 | 2.542912e-49 | -8.615850e-47 |
| Msa0961980 | Msa1009070 | 0.805337 | 1.401273e-49 | -8.615850e-47 |
| Msa0969810 | Msa1009070 | 0.805851 | 1.093348e-49 | -8.615850e-47 |
| Msa0973100 | Msa1009070 | 0.844198 | 8.772222e-59 | -8.615850e-47 |
| Msa0976670 | Msa1009070 | 0.807813 | 4.208846e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009070 | MtrunA17_Chr4g0039731 | 43.617 | 376 | 164 | 9 | 90 | 424 | 159 | 527 | 5.47e-74 | 246 |
| Msa1009070 | MtrunA17_Chr3g0086081 | 30.043 | 233 | 136 | 5 | 111 | 327 | 4 | 225 | 3.10e-24 | 102 |
| Msa1009070 | MtrunA17_Chr8g0345501 | 26.885 | 305 | 193 | 10 | 100 | 376 | 413 | 715 | 1.95e-22 | 100 |
| Msa1009070 | MtrunA17_Chr4g0010341 | 35.664 | 143 | 80 | 3 | 92 | 222 | 181 | 323 | 9.18e-21 | 94.4 |
| Msa1009070 | MtrunA17_Chr1g0176161 | 26.524 | 328 | 210 | 12 | 98 | 396 | 158 | 483 | 2.00e-18 | 87.4 |
| Msa1009070 | MtrunA17_Chr4g0025081 | 29.528 | 254 | 151 | 10 | 98 | 325 | 231 | 482 | 3.17e-18 | 86.7 |
| Msa1009070 | MtrunA17_Chr1g0168171 | 53.750 | 80 | 30 | 3 | 161 | 234 | 1 | 79 | 1.97e-17 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 122 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATAATAGCATCTTTATT+AGG | 0.143812 | 7_1:-9885516 | None:intergenic |
| GGCTATTAGGCATCAATTTC+GGG | 0.198522 | 7_1:+9885695 | Msa1009070:CDS |
| ACACAATTGTGAAGTTCTTA+TGG | 0.232303 | 7_1:+9887345 | Msa1009070:three_prime_UTR |
| GGACCACAGTTGATGTCTTT+TGG | 0.233233 | 7_1:-9885239 | None:intergenic |
| GAGAGAAACGACTTCAATTA+TGG | 0.254171 | 7_1:+9886908 | Msa1009070:CDS |
| TGGACGGCTGGTCGGGGAAG+TGG | 0.263587 | 7_1:-9885282 | None:intergenic |
| TTATAATAGCATCTTTATTA+GGG | 0.266058 | 7_1:-9885515 | None:intergenic |
| TGGCTATTAGGCATCAATTT+CGG | 0.272659 | 7_1:+9885694 | Msa1009070:CDS |
| ATGCTGGTCTTCTTGAATAT+TGG | 0.281800 | 7_1:+9886011 | Msa1009070:CDS |
| GGTAGGTTGGACGGCTGGTC+GGG | 0.294117 | 7_1:-9885289 | None:intergenic |
| ATAACCTGTGTCACTAGTTT+TGG | 0.298958 | 7_1:-9887487 | None:intergenic |
| GCGTACAAAAGTAAGAAATA+AGG | 0.303451 | 7_1:+9885955 | Msa1009070:CDS |
| CCATCCTGATGAACTCTTCT+TGG | 0.306942 | 7_1:+9886261 | Msa1009070:CDS |
| ATTGGTGACGTGTTATGTTT+TGG | 0.308723 | 7_1:+9887392 | Msa1009070:three_prime_UTR |
| GCATCCTCTCCCATCCATTT+AGG | 0.314255 | 7_1:-9885986 | None:intergenic |
| CTTCACAAAACAAGACTAAT+CGG | 0.320914 | 7_1:+9886059 | Msa1009070:CDS |
| CGAGGTAATTGTTATGGTAC+TGG | 0.324310 | 7_1:+9886955 | Msa1009070:CDS |
| GATCAGCTTCAGCAGCTCTT+TGG | 0.342233 | 7_1:-9887107 | None:intergenic |
| ATAAAATACCCTTGACCAAT+TGG | 0.342640 | 7_1:-9885552 | None:intergenic |
| TTTAATTTCTACTAATTGTA+TGG | 0.351738 | 7_1:+9887428 | Msa1009070:three_prime_UTR |
| ATGCAATGAGGATGGCTATT+AGG | 0.355754 | 7_1:+9885682 | Msa1009070:CDS |
| AAGATGTTCCTCAAGATCTA+TGG | 0.363798 | 7_1:+9885736 | Msa1009070:CDS |
| CTACTGCTATGGAAGAATTC+AGG | 0.367453 | 7_1:+9887160 | Msa1009070:CDS |
| GGGAAGTGGGACGGCTGGTC+GGG | 0.368062 | 7_1:-9885268 | None:intergenic |
| GTTGGTGAGGTGGGCTCAAC+TGG | 0.370950 | 7_1:-9885213 | None:intergenic |
| CTCAATATGATACGGAAATC+AGG | 0.372504 | 7_1:+9885906 | Msa1009070:CDS |
| TTGTCTCGAGGTAATTGTTA+TGG | 0.375766 | 7_1:+9886949 | Msa1009070:CDS |
| ATAAGGGTGAAAGACCTAAA+TGG | 0.377120 | 7_1:+9885972 | Msa1009070:CDS |
| CGATATCTTGCTAAAGCAAC+CGG | 0.377274 | 7_1:+9885138 | Msa1009070:CDS |
| CAATTATGGGTAGATGTTGC+TGG | 0.379900 | 7_1:+9886922 | Msa1009070:CDS |
| GTTGGCTACAACAAGTTTCC+CGG | 0.388452 | 7_1:-9885157 | None:intergenic |
| GGGGAAGTGGGACGGCTGGT+CGG | 0.399625 | 7_1:-9885269 | None:intergenic |
| TAGTGACACAGGTTATGTTT+TGG | 0.401948 | 7_1:+9887494 | Msa1009070:three_prime_UTR |
| AATTATGGGTAGATGTTGCT+GGG | 0.404667 | 7_1:+9886923 | Msa1009070:CDS |
| CAATCTTTGTTAGTTGAGTC+AGG | 0.404969 | 7_1:-9886849 | None:intergenic |
| TCACCATGTTCTCTTTCAAT+TGG | 0.408880 | 7_1:+9887374 | Msa1009070:three_prime_UTR |
| AACAAGACTAATCGGGGTTC+AGG | 0.414167 | 7_1:+9886067 | Msa1009070:CDS |
| GGTCGGGGAAGTGGGACGGC+TGG | 0.422751 | 7_1:-9885273 | None:intergenic |
| CTAAAACACCAACAAACATT+AGG | 0.423848 | 7_1:-9887304 | None:intergenic |
| GACTGACAGTGTAAAATACT+TGG | 0.426930 | 7_1:+9886229 | Msa1009070:intron |
| TTCACAAAACAAGACTAATC+GGG | 0.432488 | 7_1:+9886060 | Msa1009070:CDS |
| AAGATTGATGAGAATTCTAA+TGG | 0.441022 | 7_1:+9886865 | Msa1009070:CDS |
| CGTACAAAAGTAAGAAATAA+GGG | 0.453168 | 7_1:+9885956 | Msa1009070:CDS |
| TCTGGCAGGAATATGTTTCA+TGG | 0.456255 | 7_1:+9885879 | Msa1009070:intron |
| GGACGGCTGGTCGGGAAGGT+TGG | 0.457041 | 7_1:-9885260 | None:intergenic |
| CGGTAGGTTGGACGGCTGGT+CGG | 0.458580 | 7_1:-9885290 | None:intergenic |
| GGCTGCAGCAGCACGTGCTG+AGG | 0.459336 | 7_1:+9887071 | Msa1009070:CDS |
| GGACGGCTGGTCGGGGAAGT+GGG | 0.465209 | 7_1:-9885281 | None:intergenic |
| TAAGAGGAAGTCTGGCGATT+GGG | 0.469252 | 7_1:+9886291 | Msa1009070:CDS |
| AGAGAAACGACTTCAATTAT+GGG | 0.470876 | 7_1:+9886909 | Msa1009070:CDS |
| GTAGCCAAGAAGAGTTCATC+AGG | 0.473619 | 7_1:-9886265 | None:intergenic |
| GGTGATTGAAATGTTTCGTC+AGG | 0.476769 | 7_1:+9887047 | Msa1009070:CDS |
| TACCTTTGAACGAGCATTGG+TGG | 0.478671 | 7_1:-9885106 | None:intergenic |
| TAAAATACCCTTGACCAATT+GGG | 0.480390 | 7_1:-9885551 | None:intergenic |
| GAGGTAATTGTTATGGTACT+GGG | 0.483970 | 7_1:+9886956 | Msa1009070:CDS |
| GGCTGGTCGGGGAAGTGGGA+CGG | 0.491301 | 7_1:-9885277 | None:intergenic |
| TCTTCTTGGCTACTCGTAAG+AGG | 0.493331 | 7_1:+9886275 | Msa1009070:CDS |
| TAATACCTTTGAACGAGCAT+TGG | 0.494955 | 7_1:-9885109 | None:intergenic |
| GCTACTCGTAAGAGGAAGTC+TGG | 0.496029 | 7_1:+9886283 | Msa1009070:CDS |
| GTAGGTTGGACGGCTGGTCG+GGG | 0.497593 | 7_1:-9885288 | None:intergenic |
| AAGACCATCATACGCCCAAT+TGG | 0.499185 | 7_1:+9885537 | Msa1009070:CDS |
| AGTGGGACGGCTGGTCGGGA+AGG | 0.516163 | 7_1:-9885264 | None:intergenic |
| GCATTAGCACCATCTTTGCT+AGG | 0.519763 | 7_1:-9885663 | None:intergenic |
| GAATCAATTCTCTACTGCTA+TGG | 0.520159 | 7_1:+9887149 | Msa1009070:CDS |
| AGATTTACTCCTAGCAAAGA+TGG | 0.521609 | 7_1:+9885654 | Msa1009070:intron |
| TTTATTAGGGGACTCTTGCT+CGG | 0.522454 | 7_1:-9885502 | None:intergenic |
| GAAGCTTTAGAGAATCAATC+AGG | 0.522988 | 7_1:+9887192 | Msa1009070:CDS |
| TTGACCAATTGGGCGTATGA+TGG | 0.526388 | 7_1:-9885541 | None:intergenic |
| TGTCTATACCACAGGTCGTA+AGG | 0.535312 | 7_1:+9886102 | Msa1009070:CDS |
| ACTAATCGGGGTTCAGGCAA+AGG | 0.538722 | 7_1:+9886073 | Msa1009070:CDS |
| GAGGTGGGCTCAACTGGCCG+TGG | 0.541524 | 7_1:-9885207 | None:intergenic |
| CTGGCAGGAATATGTTTCAT+GGG | 0.543960 | 7_1:+9885880 | Msa1009070:intron |
| AAGAGTTCATCAGGATGGAT+AGG | 0.544009 | 7_1:-9886256 | None:intergenic |
| GTAAGAGGAAGTCTGGCGAT+TGG | 0.544893 | 7_1:+9886290 | Msa1009070:CDS |
| GGGTGAAAGACCTAAATGGA+TGG | 0.549625 | 7_1:+9885976 | Msa1009070:CDS |
| ATCATACGCCCAATTGGTCA+AGG | 0.549638 | 7_1:+9885543 | Msa1009070:CDS |
| TGACCTCACCTAATGTTTGT+TGG | 0.552315 | 7_1:+9887296 | Msa1009070:exon |
| ATTTCAAACCATAGATCTTG+AGG | 0.552511 | 7_1:-9885744 | None:intergenic |
| TCTGATTGATCATCAAGAGC+AGG | 0.560143 | 7_1:-9887270 | None:intergenic |
| TTCCACCAATGCTCGTTCAA+AGG | 0.564669 | 7_1:+9885104 | Msa1009070:CDS |
| ATGGGAGACTCAATATGATA+CGG | 0.573075 | 7_1:+9885898 | Msa1009070:CDS |
| CCATGATGTGGCACTAGACA+TGG | 0.574192 | 7_1:+9886129 | Msa1009070:CDS |
| CCATGTCTAGTGCCACATCA+TGG | 0.575525 | 7_1:-9886129 | None:intergenic |
| ATGCCGTCCTCCTGAAAATG+AGG | 0.579452 | 7_1:+9887026 | Msa1009070:CDS |
| CCAAGAAGAGTTCATCAGGA+TGG | 0.580522 | 7_1:-9886261 | None:intergenic |
| GGAAGAATTCAGGAAGCGCA+TGG | 0.584480 | 7_1:+9887170 | Msa1009070:CDS |
| GATTGAAATGTTTCGTCAGG+AGG | 0.588208 | 7_1:+9887050 | Msa1009070:CDS |
| TATAATAGCATCTTTATTAG+GGG | 0.588230 | 7_1:-9885514 | None:intergenic |
| TTAGAGAATCAATCAGGCGG+TGG | 0.588913 | 7_1:+9887198 | Msa1009070:CDS |
| TAATGGTGATATGCAAGAGG+TGG | 0.590246 | 7_1:+9886882 | Msa1009070:CDS |
| ATGGGAGAGGATGCATATGC+TGG | 0.593184 | 7_1:+9885995 | Msa1009070:CDS |
| GATTGGGTTGACAGTCGTGC+TGG | 0.597801 | 7_1:+9886307 | Msa1009070:CDS |
| TGCTCTTGATGATCAATCAG+AGG | 0.598343 | 7_1:+9887272 | Msa1009070:CDS |
| TGAGTTAGATGACTTACACC+TGG | 0.598917 | 7_1:-9887000 | None:intergenic |
| TTATCTTTCAACATTAGACC+AGG | 0.600042 | 7_1:+9886982 | Msa1009070:CDS |
| ATTATGGGTAGATGTTGCTG+GGG | 0.600229 | 7_1:+9886924 | Msa1009070:CDS |
| GGAGGAGCTGTCTATACCAC+AGG | 0.602141 | 7_1:+9886094 | Msa1009070:CDS |
| ACTGACAGTGTAAAATACTT+GGG | 0.608198 | 7_1:+9886230 | Msa1009070:intron |
| AAAATGACTAGACAATGTCA+TGG | 0.611773 | 7_1:+9885063 | Msa1009070:CDS |
| TTATGGGTAGATGTTGCTGG+GGG | 0.616713 | 7_1:+9886925 | Msa1009070:CDS |
| AAGACCTAAATGGATGGGAG+AGG | 0.617037 | 7_1:+9885982 | Msa1009070:CDS |
| GGTGAAAGACCTAAATGGAT+GGG | 0.618316 | 7_1:+9885977 | Msa1009070:CDS |
| AATGGTGATATGCAAGAGGT+GGG | 0.621480 | 7_1:+9886883 | Msa1009070:CDS |
| GATATCTTGCTAAAGCAACC+GGG | 0.623278 | 7_1:+9885139 | Msa1009070:CDS |
| TCACAAAACAAGACTAATCG+GGG | 0.623382 | 7_1:+9886061 | Msa1009070:CDS |
| ATGGTGAGCCTTACGACCTG+TGG | 0.628583 | 7_1:-9886110 | None:intergenic |
| AATCGGGGTTCAGGCAAAGG+AGG | 0.628880 | 7_1:+9886076 | Msa1009070:CDS |
| TTCTAATGGTGATATGCAAG+AGG | 0.631960 | 7_1:+9886879 | Msa1009070:CDS |
| TTAACCAAAACTAGTGACAC+AGG | 0.635406 | 7_1:+9887483 | Msa1009070:three_prime_UTR |
| GTTGCTTTAGCAAGATATCG+TGG | 0.642066 | 7_1:-9885135 | None:intergenic |
| TCAAGAGCAGGATCATAATG+TGG | 0.646262 | 7_1:-9887258 | None:intergenic |
| TCATACGCCCAATTGGTCAA+GGG | 0.653662 | 7_1:+9885544 | Msa1009070:CDS |
| TCGTAAGGCTCACCATGATG+TGG | 0.655268 | 7_1:+9886117 | Msa1009070:CDS |
| AGGTAATTGTTATGGTACTG+GGG | 0.660624 | 7_1:+9886957 | Msa1009070:CDS |
| TGGTGCTAATGCAATGAGGA+TGG | 0.662918 | 7_1:+9885674 | Msa1009070:CDS |
| ACACCAACAAACATTAGGTG+AGG | 0.663720 | 7_1:-9887299 | None:intergenic |
| TCACCAATTGAAAGAGAACA+TGG | 0.665912 | 7_1:-9887377 | None:intergenic |
| GGTGATATGCAAGAGGTGGG+CGG | 0.675105 | 7_1:+9886886 | Msa1009070:CDS |
| AATTGAAAGAGAACATGGTG+AGG | 0.697328 | 7_1:-9887372 | None:intergenic |
| GCTTTAGAGAATCAATCAGG+CGG | 0.724831 | 7_1:+9887195 | Msa1009070:CDS |
| AATCCAAAAGACATCAACTG+TGG | 0.734923 | 7_1:+9885236 | Msa1009070:CDS |
| AAGATGGTGCTAATGCAATG+AGG | 0.735156 | 7_1:+9885670 | Msa1009070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAATAGCATCTTTATTA+GGG | - | chr7_1:9885518-9885537 | None:intergenic | 15.0% |
| !! | TTTATAATAGCATCTTTATT+AGG | - | chr7_1:9885519-9885538 | None:intergenic | 15.0% |
| !! | TAATGATCAAAATACATATA+TGG | + | chr7_1:9886565-9886584 | Msa1009070:intron | 15.0% |
| !!! | TTTAATTTCTACTAATTGTA+TGG | + | chr7_1:9887428-9887447 | Msa1009070:three_prime_UTR | 15.0% |
| !! | TATAATAGCATCTTTATTAG+GGG | - | chr7_1:9885517-9885536 | None:intergenic | 20.0% |
| !!! | TCTATGGTTTGAAATATTTT+CGG | + | chr7_1:9885752-9885771 | Msa1009070:CDS | 20.0% |
| !!! | TTTGCTATTTTTATATTGTC+TGG | + | chr7_1:9885861-9885880 | Msa1009070:intron | 20.0% |
| !! | AGATATTAAAGAAATTGGAA+TGG | - | chr7_1:9886162-9886181 | None:intergenic | 20.0% |
| !! | GAACTAGATATTAAAGAAAT+TGG | - | chr7_1:9886167-9886186 | None:intergenic | 20.0% |
| !!! | AGACATTACTATTTGTTTTA+TGG | + | chr7_1:9886203-9886222 | Msa1009070:intron | 20.0% |
| !! | ATATGTGAACATATATAATC+TGG | + | chr7_1:9886451-9886470 | Msa1009070:intron | 20.0% |
| !! | ATATGTGAACACATATAATT+TGG | + | chr7_1:9886675-9886694 | Msa1009070:intron | 20.0% |
| !!! | AATAAGTTGTGTTTTTTTAC+AGG | + | chr7_1:9886810-9886829 | Msa1009070:intron | 20.0% |
| ! | CGTACAAAAGTAAGAAATAA+GGG | + | chr7_1:9885956-9885975 | Msa1009070:CDS | 25.0% |
| ! | CTCAATATTACAGACATATT+CGG | - | chr7_1:9886431-9886450 | None:intergenic | 25.0% |
| ! | AAGATTGATGAGAATTCTAA+TGG | + | chr7_1:9886865-9886884 | Msa1009070:CDS | 25.0% |
| !!! | GGTGTTTTAGTTTTTTTTCT+TGG | + | chr7_1:9887317-9887336 | Msa1009070:three_prime_UTR | 25.0% |
| ! | TTTGGTTAACCAAAAAAGTT+TGG | - | chr7_1:9887472-9887491 | None:intergenic | 25.0% |
| AAAATGACTAGACAATGTCA+TGG | + | chr7_1:9885063-9885082 | Msa1009070:CDS | 30.0% | |
| TAAAATACCCTTGACCAATT+GGG | - | chr7_1:9885554-9885573 | None:intergenic | 30.0% | |
| ATAAAATACCCTTGACCAAT+TGG | - | chr7_1:9885555-9885574 | None:intergenic | 30.0% | |
| ATTTCAAACCATAGATCTTG+AGG | - | chr7_1:9885747-9885766 | None:intergenic | 30.0% | |
| !! | GGTTTGAAATATTTTCGGTA+AGG | + | chr7_1:9885757-9885776 | Msa1009070:intron | 30.0% |
| AAAGAATAGTGTAGCTTCAT+TGG | + | chr7_1:9885785-9885804 | Msa1009070:intron | 30.0% | |
| !!! | CTATTTTTATATTGTCTGGC+AGG | + | chr7_1:9885865-9885884 | Msa1009070:intron | 30.0% |
| !! | TTCTTACTTTTGTACGCTTT+GGG | - | chr7_1:9885952-9885971 | None:intergenic | 30.0% |
| !! | TTTCTTACTTTTGTACGCTT+TGG | - | chr7_1:9885953-9885972 | None:intergenic | 30.0% |
| GCGTACAAAAGTAAGAAATA+AGG | + | chr7_1:9885955-9885974 | Msa1009070:CDS | 30.0% | |
| CTTCACAAAACAAGACTAAT+CGG | + | chr7_1:9886059-9886078 | Msa1009070:CDS | 30.0% | |
| TTCACAAAACAAGACTAATC+GGG | + | chr7_1:9886060-9886079 | Msa1009070:CDS | 30.0% | |
| ACTGACAGTGTAAAATACTT+GGG | + | chr7_1:9886230-9886249 | Msa1009070:intron | 30.0% | |
| ATGGATAAGTTATGTAAACC+TGG | + | chr7_1:9886584-9886603 | Msa1009070:intron | 30.0% | |
| TCTCAAATTGCAAATATTCC+AGG | - | chr7_1:9886605-9886624 | None:intergenic | 30.0% | |
| TAACACATATCTCAAGATTG+TGG | - | chr7_1:9886651-9886670 | None:intergenic | 30.0% | |
| ! | CAGAAGCACATAATGAATTA+TGG | - | chr7_1:9886718-9886737 | None:intergenic | 30.0% |
| AGAGAAACGACTTCAATTAT+GGG | + | chr7_1:9886909-9886928 | Msa1009070:CDS | 30.0% | |
| TTATCTTTCAACATTAGACC+AGG | + | chr7_1:9886982-9887001 | Msa1009070:CDS | 30.0% | |
| ! | ATTTCAATCACCTCATTTTC+AGG | - | chr7_1:9887039-9887058 | None:intergenic | 30.0% |
| CTAAAACACCAACAAACATT+AGG | - | chr7_1:9887307-9887326 | None:intergenic | 30.0% | |
| ACACAATTGTGAAGTTCTTA+TGG | + | chr7_1:9887345-9887364 | Msa1009070:three_prime_UTR | 30.0% | |
| TAATACCTTTGAACGAGCAT+TGG | - | chr7_1:9885112-9885131 | None:intergenic | 35.0% | |
| ! | GTTGATGTCTTTTGGATTGT+TGG | - | chr7_1:9885234-9885253 | None:intergenic | 35.0% |
| AATCCAAAAGACATCAACTG+TGG | + | chr7_1:9885236-9885255 | Msa1009070:CDS | 35.0% | |
| AGATTTACTCCTAGCAAAGA+TGG | + | chr7_1:9885654-9885673 | Msa1009070:intron | 35.0% | |
| TGGCTATTAGGCATCAATTT+CGG | + | chr7_1:9885694-9885713 | Msa1009070:CDS | 35.0% | |
| AAGATGTTCCTCAAGATCTA+TGG | + | chr7_1:9885736-9885755 | Msa1009070:CDS | 35.0% | |
| ATGGGAGACTCAATATGATA+CGG | + | chr7_1:9885898-9885917 | Msa1009070:CDS | 35.0% | |
| CTCAATATGATACGGAAATC+AGG | + | chr7_1:9885906-9885925 | Msa1009070:CDS | 35.0% | |
| ATAAGGGTGAAAGACCTAAA+TGG | + | chr7_1:9885972-9885991 | Msa1009070:CDS | 35.0% | |
| !! | ATGCTGGTCTTCTTGAATAT+TGG | + | chr7_1:9886011-9886030 | Msa1009070:CDS | 35.0% |
| TCACAAAACAAGACTAATCG+GGG | + | chr7_1:9886061-9886080 | Msa1009070:CDS | 35.0% | |
| GACTGACAGTGTAAAATACT+TGG | + | chr7_1:9886229-9886248 | Msa1009070:intron | 35.0% | |
| CACGAGCACATAATGAATTA+TGG | - | chr7_1:9886494-9886513 | None:intergenic | 35.0% | |
| CTCAAGATTGTGGACATATT+CGG | - | chr7_1:9886641-9886660 | None:intergenic | 35.0% | |
| CAATCTTTGTTAGTTGAGTC+AGG | - | chr7_1:9886852-9886871 | None:intergenic | 35.0% | |
| TTCTAATGGTGATATGCAAG+AGG | + | chr7_1:9886879-9886898 | Msa1009070:CDS | 35.0% | |
| GAGAGAAACGACTTCAATTA+TGG | + | chr7_1:9886908-9886927 | Msa1009070:CDS | 35.0% | |
| AATTATGGGTAGATGTTGCT+GGG | + | chr7_1:9886923-9886942 | Msa1009070:CDS | 35.0% | |
| TTGTCTCGAGGTAATTGTTA+TGG | + | chr7_1:9886949-9886968 | Msa1009070:CDS | 35.0% | |
| GAGGTAATTGTTATGGTACT+GGG | + | chr7_1:9886956-9886975 | Msa1009070:CDS | 35.0% | |
| AGGTAATTGTTATGGTACTG+GGG | + | chr7_1:9886957-9886976 | Msa1009070:CDS | 35.0% | |
| GAATCAATTCTCTACTGCTA+TGG | + | chr7_1:9887149-9887168 | Msa1009070:CDS | 35.0% | |
| !! | GAAGCTTTAGAGAATCAATC+AGG | + | chr7_1:9887192-9887211 | Msa1009070:CDS | 35.0% |
| AATTGAAAGAGAACATGGTG+AGG | - | chr7_1:9887375-9887394 | None:intergenic | 35.0% | |
| TCACCATGTTCTCTTTCAAT+TGG | + | chr7_1:9887374-9887393 | Msa1009070:three_prime_UTR | 35.0% | |
| TCACCAATTGAAAGAGAACA+TGG | - | chr7_1:9887380-9887399 | None:intergenic | 35.0% | |
| !!! | ATTGGTGACGTGTTATGTTT+TGG | + | chr7_1:9887392-9887411 | Msa1009070:three_prime_UTR | 35.0% |
| !!! | TTGGTGACGTGTTATGTTTT+GGG | + | chr7_1:9887393-9887412 | Msa1009070:three_prime_UTR | 35.0% |
| !!! | CAGCATATGCCAAACTTTTT+TGG | + | chr7_1:9887460-9887479 | Msa1009070:three_prime_UTR | 35.0% |
| TTAACCAAAACTAGTGACAC+AGG | + | chr7_1:9887483-9887502 | Msa1009070:three_prime_UTR | 35.0% | |
| !! | ATAACCTGTGTCACTAGTTT+TGG | - | chr7_1:9887490-9887509 | None:intergenic | 35.0% |
| ! | TAGTGACACAGGTTATGTTT+TGG | + | chr7_1:9887494-9887513 | Msa1009070:three_prime_UTR | 35.0% |
| !!! | AGGTTATGTTTTGGCACTTT+AGG | + | chr7_1:9887503-9887522 | Msa1009070:three_prime_UTR | 35.0% |
| ! | GTTGCTTTAGCAAGATATCG+TGG | - | chr7_1:9885138-9885157 | None:intergenic | 40.0% |
| CGATATCTTGCTAAAGCAAC+CGG | + | chr7_1:9885138-9885157 | Msa1009070:CDS | 40.0% | |
| GATATCTTGCTAAAGCAACC+GGG | + | chr7_1:9885139-9885158 | Msa1009070:CDS | 40.0% | |
| !!! | GTGGTAACCCCAGTTTTTTT+CGG | - | chr7_1:9885191-9885210 | None:intergenic | 40.0% |
| GAAAAAAACTGGGGTTACCA+CGG | + | chr7_1:9885190-9885209 | Msa1009070:CDS | 40.0% | |
| !! | TTTTGGATTGTTGGTGAGGT+GGG | - | chr7_1:9885225-9885244 | None:intergenic | 40.0% |
| ! | TGTCTTTTGGATTGTTGGTG+AGG | - | chr7_1:9885229-9885248 | None:intergenic | 40.0% |
| TTTATTAGGGGACTCTTGCT+CGG | - | chr7_1:9885505-9885524 | None:intergenic | 40.0% | |
| ! | AAGATGGTGCTAATGCAATG+AGG | + | chr7_1:9885670-9885689 | Msa1009070:CDS | 40.0% |
| ATGCAATGAGGATGGCTATT+AGG | + | chr7_1:9885682-9885701 | Msa1009070:CDS | 40.0% | |
| GGCTATTAGGCATCAATTTC+GGG | + | chr7_1:9885695-9885714 | Msa1009070:CDS | 40.0% | |
| ! | GCTTCATTGGTTGAAAACTG+TGG | + | chr7_1:9885798-9885817 | Msa1009070:intron | 40.0% |
| ! | CATATTTCTGCAGCAACCAA+AGG | - | chr7_1:9885833-9885852 | None:intergenic | 40.0% |
| TCTGGCAGGAATATGTTTCA+TGG | + | chr7_1:9885879-9885898 | Msa1009070:intron | 40.0% | |
| CTGGCAGGAATATGTTTCAT+GGG | + | chr7_1:9885880-9885899 | Msa1009070:intron | 40.0% | |
| GGTGAAAGACCTAAATGGAT+GGG | + | chr7_1:9885977-9885996 | Msa1009070:CDS | 40.0% | |
| AAGAGTTCATCAGGATGGAT+AGG | - | chr7_1:9886259-9886278 | None:intergenic | 40.0% | |
| TAATGGTGATATGCAAGAGG+TGG | + | chr7_1:9886882-9886901 | Msa1009070:CDS | 40.0% | |
| AATGGTGATATGCAAGAGGT+GGG | + | chr7_1:9886883-9886902 | Msa1009070:CDS | 40.0% | |
| CAATTATGGGTAGATGTTGC+TGG | + | chr7_1:9886922-9886941 | Msa1009070:CDS | 40.0% | |
| ATTATGGGTAGATGTTGCTG+GGG | + | chr7_1:9886924-9886943 | Msa1009070:CDS | 40.0% | |
| CGAGGTAATTGTTATGGTAC+TGG | + | chr7_1:9886955-9886974 | Msa1009070:CDS | 40.0% | |
| TGAGTTAGATGACTTACACC+TGG | - | chr7_1:9887003-9887022 | None:intergenic | 40.0% | |
| !! | TCAATCACCTCATTTTCAGG+AGG | - | chr7_1:9887036-9887055 | None:intergenic | 40.0% |
| GGTGATTGAAATGTTTCGTC+AGG | + | chr7_1:9887047-9887066 | Msa1009070:CDS | 40.0% | |
| GATTGAAATGTTTCGTCAGG+AGG | + | chr7_1:9887050-9887069 | Msa1009070:CDS | 40.0% | |
| CTACTGCTATGGAAGAATTC+AGG | + | chr7_1:9887160-9887179 | Msa1009070:CDS | 40.0% | |
| !! | GCTTTAGAGAATCAATCAGG+CGG | + | chr7_1:9887195-9887214 | Msa1009070:CDS | 40.0% |
| TCAAGAGCAGGATCATAATG+TGG | - | chr7_1:9887261-9887280 | None:intergenic | 40.0% | |
| TCTGATTGATCATCAAGAGC+AGG | - | chr7_1:9887273-9887292 | None:intergenic | 40.0% | |
| ! | TGCTCTTGATGATCAATCAG+AGG | + | chr7_1:9887272-9887291 | Msa1009070:CDS | 40.0% |
| TGACCTCACCTAATGTTTGT+TGG | + | chr7_1:9887296-9887315 | Msa1009070:exon | 40.0% | |
| ACACCAACAAACATTAGGTG+AGG | - | chr7_1:9887302-9887321 | None:intergenic | 40.0% | |
| TTCCACCAATGCTCGTTCAA+AGG | + | chr7_1:9885104-9885123 | Msa1009070:CDS | 45.0% | |
| !! | TACCTTTGAACGAGCATTGG+TGG | - | chr7_1:9885109-9885128 | None:intergenic | 45.0% |
| GTTGGCTACAACAAGTTTCC+CGG | - | chr7_1:9885160-9885179 | None:intergenic | 45.0% | |
| !! | CTTTTGGATTGTTGGTGAGG+TGG | - | chr7_1:9885226-9885245 | None:intergenic | 45.0% |
| !! | GGACCACAGTTGATGTCTTT+TGG | - | chr7_1:9885242-9885261 | None:intergenic | 45.0% |
| ! | ATCTAGTTCGGTAGGTTGGA+CGG | - | chr7_1:9885301-9885320 | None:intergenic | 45.0% |
| ! | AGCTAGATCAGTAGGTTGGA+CGG | - | chr7_1:9885364-9885383 | None:intergenic | 45.0% |
| CAGATGATCATCCTCCTCAA+GGG | - | chr7_1:9885454-9885473 | None:intergenic | 45.0% | |
| AAGACCATCATACGCCCAAT+TGG | + | chr7_1:9885537-9885556 | Msa1009070:CDS | 45.0% | |
| TTGACCAATTGGGCGTATGA+TGG | - | chr7_1:9885544-9885563 | None:intergenic | 45.0% | |
| ATCATACGCCCAATTGGTCA+AGG | + | chr7_1:9885543-9885562 | Msa1009070:CDS | 45.0% | |
| TCATACGCCCAATTGGTCAA+GGG | + | chr7_1:9885544-9885563 | Msa1009070:CDS | 45.0% | |
| GCATTAGCACCATCTTTGCT+AGG | - | chr7_1:9885666-9885685 | None:intergenic | 45.0% | |
| ! | TGGTGCTAATGCAATGAGGA+TGG | + | chr7_1:9885674-9885693 | Msa1009070:CDS | 45.0% |
| GGGTGAAAGACCTAAATGGA+TGG | + | chr7_1:9885976-9885995 | Msa1009070:CDS | 45.0% | |
| AAGACCTAAATGGATGGGAG+AGG | + | chr7_1:9885982-9886001 | Msa1009070:CDS | 45.0% | |
| AACAAGACTAATCGGGGTTC+AGG | + | chr7_1:9886067-9886086 | Msa1009070:CDS | 45.0% | |
| TGTCTATACCACAGGTCGTA+AGG | + | chr7_1:9886102-9886121 | Msa1009070:CDS | 45.0% | |
| CCAAGAAGAGTTCATCAGGA+TGG | - | chr7_1:9886264-9886283 | None:intergenic | 45.0% | |
| CCATCCTGATGAACTCTTCT+TGG | + | chr7_1:9886261-9886280 | Msa1009070:CDS | 45.0% | |
| GTAGCCAAGAAGAGTTCATC+AGG | - | chr7_1:9886268-9886287 | None:intergenic | 45.0% | |
| TCTTCTTGGCTACTCGTAAG+AGG | + | chr7_1:9886275-9886294 | Msa1009070:CDS | 45.0% | |
| TAAGAGGAAGTCTGGCGATT+GGG | + | chr7_1:9886291-9886310 | Msa1009070:CDS | 45.0% | |
| TTATGGGTAGATGTTGCTGG+GGG | + | chr7_1:9886925-9886944 | Msa1009070:CDS | 45.0% | |
| !! | TCACCTCATTTTCAGGAGGA+CGG | - | chr7_1:9887032-9887051 | None:intergenic | 45.0% |
| TTAGAGAATCAATCAGGCGG+TGG | + | chr7_1:9887198-9887217 | Msa1009070:CDS | 45.0% | |
| !! | CGTGTTATGTTTTGGGCTGT+AGG | + | chr7_1:9887400-9887419 | Msa1009070:three_prime_UTR | 45.0% |
| !!! | TTTTTTTCGGCGCGTCTCGT+TGG | - | chr7_1:9885178-9885197 | None:intergenic | 50.0% |
| GAGACGCGCCGAAAAAAACT+GGG | + | chr7_1:9885180-9885199 | Msa1009070:CDS | 50.0% | |
| AGACGCGCCGAAAAAAACTG+GGG | + | chr7_1:9885181-9885200 | Msa1009070:CDS | 50.0% | |
| ! | GGACATCTAGTTCGGTAGGT+TGG | - | chr7_1:9885305-9885324 | None:intergenic | 50.0% |
| ! | GGTTGGACATCTAGTTCGGT+AGG | - | chr7_1:9885309-9885328 | None:intergenic | 50.0% |
| ! | GGCAGGTTGGACATCTAGTT+CGG | - | chr7_1:9885313-9885332 | None:intergenic | 50.0% |
| GGACAGCTAGATCAGTAGGT+TGG | - | chr7_1:9885368-9885387 | None:intergenic | 50.0% | |
| GGTTGGACAGCTAGATCAGT+AGG | - | chr7_1:9885372-9885391 | None:intergenic | 50.0% | |
| ACTTGAGAAGGTAGGACCAC+CGG | - | chr7_1:9885408-9885427 | None:intergenic | 50.0% | |
| GTGCAGTCACTTGAGAAGGT+AGG | - | chr7_1:9885416-9885435 | None:intergenic | 50.0% | |
| ACCTTCTCAAGTGACTGCAC+CGG | + | chr7_1:9885416-9885435 | Msa1009070:intron | 50.0% | |
| TCAAGGGAAGGTAGTGATGC+CGG | - | chr7_1:9885438-9885457 | None:intergenic | 50.0% | |
| ATCACTACCTTCCCTTGAGG+AGG | + | chr7_1:9885440-9885459 | Msa1009070:intron | 50.0% | |
| TGATCATCCTCCTCAAGGGA+AGG | - | chr7_1:9885450-9885469 | None:intergenic | 50.0% | |
| GCAGATGATCATCCTCCTCA+AGG | - | chr7_1:9885455-9885474 | None:intergenic | 50.0% | |
| GAGGAGGATGATCATCTGCA+AGG | + | chr7_1:9885456-9885475 | Msa1009070:intron | 50.0% | |
| TGATCATCTGCAAGGTGTGC+AGG | + | chr7_1:9885464-9885483 | Msa1009070:intron | 50.0% | |
| GATCATCTGCAAGGTGTGCA+GGG | + | chr7_1:9885465-9885484 | Msa1009070:intron | 50.0% | |
| !! | TTCGGGATGTTTTTGCGTGC+TGG | + | chr7_1:9885712-9885731 | Msa1009070:CDS | 50.0% |
| !! | TCGGGATGTTTTTGCGTGCT+GGG | + | chr7_1:9885713-9885732 | Msa1009070:CDS | 50.0% |
| ! | ACTGTGGTGCCTTGTTCCTT+TGG | + | chr7_1:9885814-9885833 | Msa1009070:intron | 50.0% |
| CTGCAGCAACCAAAGGAACA+AGG | - | chr7_1:9885826-9885845 | None:intergenic | 50.0% | |
| GCATCCTCTCCCATCCATTT+AGG | - | chr7_1:9885989-9886008 | None:intergenic | 50.0% | |
| ATGGGAGAGGATGCATATGC+TGG | + | chr7_1:9885995-9886014 | Msa1009070:CDS | 50.0% | |
| ACTAATCGGGGTTCAGGCAA+AGG | + | chr7_1:9886073-9886092 | Msa1009070:CDS | 50.0% | |
| TCGTAAGGCTCACCATGATG+TGG | + | chr7_1:9886117-9886136 | Msa1009070:CDS | 50.0% | |
| CCATGTCTAGTGCCACATCA+TGG | - | chr7_1:9886132-9886151 | None:intergenic | 50.0% | |
| CCATGATGTGGCACTAGACA+TGG | + | chr7_1:9886129-9886148 | Msa1009070:CDS | 50.0% | |
| GCTACTCGTAAGAGGAAGTC+TGG | + | chr7_1:9886283-9886302 | Msa1009070:CDS | 50.0% | |
| GTAAGAGGAAGTCTGGCGAT+TGG | + | chr7_1:9886290-9886309 | Msa1009070:CDS | 50.0% | |
| ATGCCGTCCTCCTGAAAATG+AGG | + | chr7_1:9887026-9887045 | Msa1009070:CDS | 50.0% | |
| GATCAGCTTCAGCAGCTCTT+TGG | - | chr7_1:9887110-9887129 | None:intergenic | 50.0% | |
| ! | GGAAGAATTCAGGAAGCGCA+TGG | + | chr7_1:9887170-9887189 | Msa1009070:CDS | 50.0% |
| CGAGACGCGCCGAAAAAAAC+TGG | + | chr7_1:9885179-9885198 | Msa1009070:CDS | 55.0% | |
| AGGGAGGTTGGATGGTTGGT+CGG | - | chr7_1:9885335-9885354 | None:intergenic | 55.0% | |
| ! | AGATCAGTAGGTTGGACGGC+TGG | - | chr7_1:9885360-9885379 | None:intergenic | 55.0% |
| GGCATCACTACCTTCCCTTG+AGG | + | chr7_1:9885437-9885456 | Msa1009070:intron | 55.0% | |
| AATCGGGGTTCAGGCAAAGG+AGG | + | chr7_1:9886076-9886095 | Msa1009070:CDS | 55.0% | |
| GGAGGAGCTGTCTATACCAC+AGG | + | chr7_1:9886094-9886113 | Msa1009070:CDS | 55.0% | |
| ATGGTGAGCCTTACGACCTG+TGG | - | chr7_1:9886113-9886132 | None:intergenic | 55.0% | |
| !! | GATTGGGTTGACAGTCGTGC+TGG | + | chr7_1:9886307-9886326 | Msa1009070:CDS | 55.0% |
| GGTGATATGCAAGAGGTGGG+CGG | + | chr7_1:9886886-9886905 | Msa1009070:CDS | 55.0% | |
| ! | GTTGGTGAGGTGGGCTCAAC+TGG | - | chr7_1:9885216-9885235 | None:intergenic | 60.0% |
| ! | AGTTCGGTAGGTTGGACGGC+TGG | - | chr7_1:9885297-9885316 | None:intergenic | 60.0% |
| ! | GGGAGGTTGGATGGTTGGTC+GGG | - | chr7_1:9885334-9885353 | None:intergenic | 60.0% |
| GGTCAGGGAGGTTGGATGGT+TGG | - | chr7_1:9885339-9885358 | None:intergenic | 60.0% | |
| ! | GTAGGTTGGACGGCTGGTCA+GGG | - | chr7_1:9885354-9885373 | None:intergenic | 60.0% |
| ! | AGTAGGTTGGACGGCTGGTC+AGG | - | chr7_1:9885355-9885374 | None:intergenic | 60.0% |
| GCCGGTGCAGTCACTTGAGA+AGG | - | chr7_1:9885420-9885439 | None:intergenic | 60.0% | |
| GTTGCTGGGGGTTTGTCTCG+AGG | + | chr7_1:9886937-9886956 | Msa1009070:CDS | 60.0% | |
| ! | GTAGGTTGGACGGCTGGTCG+GGG | - | chr7_1:9885291-9885310 | None:intergenic | 65.0% |
| ! | GGTAGGTTGGACGGCTGGTC+GGG | - | chr7_1:9885292-9885311 | None:intergenic | 65.0% |
| ! | CGGTAGGTTGGACGGCTGGT+CGG | - | chr7_1:9885293-9885312 | None:intergenic | 65.0% |
| ! | GGATGGTTGGTCGGGCAGGT+TGG | - | chr7_1:9885326-9885345 | None:intergenic | 65.0% |
| ! | GGTTGGATGGTTGGTCGGGC+AGG | - | chr7_1:9885330-9885349 | None:intergenic | 65.0% |
| ! | GGCTGGTCAGGGAGGTTGGA+TGG | - | chr7_1:9885343-9885362 | None:intergenic | 65.0% |
| !! | TAGGACCACCGGTGCTGGTG+GGG | - | chr7_1:9885397-9885416 | None:intergenic | 65.0% |
| !! | GTAGGACCACCGGTGCTGGT+GGG | - | chr7_1:9885398-9885417 | None:intergenic | 65.0% |
| GAAGGTAGGACCACCGGTGC+TGG | - | chr7_1:9885402-9885421 | None:intergenic | 65.0% | |
| ! | GAGGTGGGCTCAACTGGCCG+TGG | - | chr7_1:9885210-9885229 | None:intergenic | 70.0% |
| ! | GGACGGCTGGTCGGGAAGGT+TGG | - | chr7_1:9885263-9885282 | None:intergenic | 70.0% |
| ! | AGTGGGACGGCTGGTCGGGA+AGG | - | chr7_1:9885267-9885286 | None:intergenic | 70.0% |
| ! | GGGAAGTGGGACGGCTGGTC+GGG | - | chr7_1:9885271-9885290 | None:intergenic | 70.0% |
| GGGGAAGTGGGACGGCTGGT+CGG | - | chr7_1:9885272-9885291 | None:intergenic | 70.0% | |
| ! | GGCTGGTCGGGGAAGTGGGA+CGG | - | chr7_1:9885280-9885299 | None:intergenic | 70.0% |
| ! | GGACGGCTGGTCGGGGAAGT+GGG | - | chr7_1:9885284-9885303 | None:intergenic | 70.0% |
| ! | TGGACGGCTGGTCGGGGAAG+TGG | - | chr7_1:9885285-9885304 | None:intergenic | 70.0% |
| ! | GGACGGCTGGTCAGGGAGGT+TGG | - | chr7_1:9885347-9885366 | None:intergenic | 70.0% |
| ! | GGTTGGACGGCTGGTCAGGG+AGG | - | chr7_1:9885351-9885370 | None:intergenic | 70.0% |
| CCAACCTGCCCCACCAGCAC+CGG | + | chr7_1:9885386-9885405 | Msa1009070:intron | 70.0% | |
| ! | GGTAGGACCACCGGTGCTGG+TGG | - | chr7_1:9885399-9885418 | None:intergenic | 70.0% |
| GGCTGCAGCAGCACGTGCTG+AGG | + | chr7_1:9887071-9887090 | Msa1009070:CDS | 70.0% | |
| GGTCGGGGAAGTGGGACGGC+TGG | - | chr7_1:9885276-9885295 | None:intergenic | 75.0% | |
| !! | CCGGTGCTGGTGGGGCAGGT+TGG | - | chr7_1:9885389-9885408 | None:intergenic | 75.0% |
| ! | ACCTGCCCCACCAGCACCGG+TGG | + | chr7_1:9885389-9885408 | Msa1009070:intron | 75.0% |
| !! | ACCACCGGTGCTGGTGGGGC+AGG | - | chr7_1:9885393-9885412 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 9885063 | 9887596 | 9885063 | ID=Msa1009070;Name=Msa1009070 |
| chr7_1 | mRNA | 9885063 | 9887596 | 9885063 | ID=Msa1009070-mRNA-1;Parent=Msa1009070;Name=Msa1009070-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.8|0.66|1|1|1|6|288|425 |
| chr7_1 | exon | 9885063 | 9885299 | 9885063 | ID=Msa1009070-mRNA-1:exon:2770;Parent=Msa1009070-mRNA-1 |
| chr7_1 | exon | 9885486 | 9885565 | 9885486 | ID=Msa1009070-mRNA-1:exon:2771;Parent=Msa1009070-mRNA-1 |
| chr7_1 | exon | 9885656 | 9885773 | 9885656 | ID=Msa1009070-mRNA-1:exon:2772;Parent=Msa1009070-mRNA-1 |
| chr7_1 | exon | 9885887 | 9886150 | 9885887 | ID=Msa1009070-mRNA-1:exon:2773;Parent=Msa1009070-mRNA-1 |
| chr7_1 | exon | 9886238 | 9886339 | 9886238 | ID=Msa1009070-mRNA-1:exon:2774;Parent=Msa1009070-mRNA-1 |
| chr7_1 | exon | 9886832 | 9887596 | 9886832 | ID=Msa1009070-mRNA-1:exon:2775;Parent=Msa1009070-mRNA-1 |
| chr7_1 | CDS | 9885063 | 9885299 | 9885063 | ID=Msa1009070-mRNA-1:cds;Parent=Msa1009070-mRNA-1 |
| chr7_1 | CDS | 9885486 | 9885565 | 9885486 | ID=Msa1009070-mRNA-1:cds;Parent=Msa1009070-mRNA-1 |
| chr7_1 | CDS | 9885656 | 9885773 | 9885656 | ID=Msa1009070-mRNA-1:cds;Parent=Msa1009070-mRNA-1 |
| chr7_1 | CDS | 9885887 | 9886150 | 9885887 | ID=Msa1009070-mRNA-1:cds;Parent=Msa1009070-mRNA-1 |
| chr7_1 | CDS | 9886238 | 9886339 | 9886238 | ID=Msa1009070-mRNA-1:cds;Parent=Msa1009070-mRNA-1 |
| chr7_1 | CDS | 9886832 | 9887308 | 9886832 | ID=Msa1009070-mRNA-1:cds;Parent=Msa1009070-mRNA-1 |
| chr7_1 | three_prime_UTR | 9887309 | 9887596 | 9887309 | ID=Msa1009070-mRNA-1:three_prime_utr;Parent=Msa1009070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
