AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644970 MtrunA17_Chr4g0032371 98.748 559 5 1 1 559 1 557 0.0 1077
Msa0644970 MtrunA17_Chr2g0279391 50.740 473 229 3 90 559 96 567 3.54e-157 461
Msa0644970 MtrunA17_Chr4g0042261 98.810 84 1 0 476 559 1 84 1.77e-49 165
Msa0644970 MtrunA17_Chr4g0042271 68.182 132 23 4 332 455 12 132 1.95e-44 154
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644970 AT5G12860.1 79.926 543 101 4 25 559 15 557 0.0 840
Msa0644970 AT5G12860.2 79.889 542 101 4 25 558 15 556 0.0 838
Msa0644970 AT5G64290.1 47.312 558 287 5 6 559 9 563 2.02e-160 469
Msa0644970 AT5G64280.1 46.717 533 278 5 31 559 19 549 6.25e-146 432

Find 252 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTGTACTGAAATCTTTA+TGG 0.136643 4_3:+49330059 None:intergenic
ATGGGAGGCCTTACTCATTA+TGG 0.207768 4_3:-49330506 Msa0644970:CDS
GTCATTCCTCTCCAACCTTA+TGG 0.214853 4_3:-49330525 Msa0644970:CDS
GCAACTATCTTTCGGTATTC+TGG 0.238296 4_3:-49330675 Msa0644970:CDS
CAGGTGGGACTTTGGGTGTT+TGG 0.241180 4_3:-49331587 Msa0644970:CDS
GCCGTAACTGCTGCCATTCT+TGG 0.244211 4_3:-49331545 Msa0644970:CDS
AGACGATTGGGTGGGTGGAC+TGG 0.247258 4_3:-49332594 Msa0644970:CDS
GGCTTGGACTCGGGTCTATT+TGG 0.247406 4_3:-49330385 Msa0644970:CDS
CTCGGCGCTGTGGCAATTCT+AGG 0.247811 4_3:-49333063 Msa0644970:CDS
TAGGGAAAAGTTGGAGAAAA+TGG 0.256426 4_3:-49332461 Msa0644970:CDS
GTAAACACATCTTGTTATTC+AGG 0.258824 4_3:-49330117 Msa0644970:three_prime_UTR
TGAAATGAGGGGTTTGAAAA+TGG 0.267033 4_3:+49333329 None:intergenic
CTTGCCAAATGGTGGGGTTA+TGG 0.288623 4_3:-49330440 Msa0644970:CDS
GCGTTGCGGGATACGCCTTC+AGG 0.306705 4_3:+49333147 None:intergenic
GGGTTTGGTTTCCTTGGTTT+TGG 0.309670 4_3:-49332551 Msa0644970:CDS
TGCAACAAAGGGTAGGGTTT+TGG 0.314228 4_3:+49333020 None:intergenic
TGATGCTATGAGTGGTTTAA+TGG 0.314722 4_3:+49333206 None:intergenic
TGGGAGGCCTTACTCATTAT+GGG 0.316934 4_3:-49330505 Msa0644970:CDS
GGCTGAGCTGGTGGCGGAGC+TGG 0.320018 4_3:+49333243 None:intergenic
TGTTGATGTTGGCGGAGGGG+TGG 0.321463 4_3:+49333414 None:intergenic
TTTGTCTGTTGCTACTGCTC+TGG 0.321769 4_3:-49330579 Msa0644970:CDS
AAACAAATCAACCATGGAAT+TGG 0.331446 4_3:+49332976 None:intergenic
GCATGCTCAGCCTTGCTACT+TGG 0.331793 4_3:+49329952 None:intergenic
TCATTCCTCTCCAACCTTAT+GGG 0.332451 4_3:-49330524 Msa0644970:CDS
GCGCCTTGCCATGGCTGAGC+TGG 0.336605 4_3:+49333231 None:intergenic
ACACAGTTTGTTGGTGGATT+GGG 0.337833 4_3:-49330707 Msa0644970:intron
AGCGGCTATTGTGCCGGGTT+TGG 0.350388 4_3:-49332566 Msa0644970:CDS
TGAGTGTGGATCGTTGGATT+TGG 0.352107 4_3:+49333591 None:intergenic
GGCCTTACTCATTATGGGAT+TGG 0.355340 4_3:-49330500 Msa0644970:CDS
TGGAATGGACGGTGGAGGTT+GGG 0.355641 4_3:+49333611 None:intergenic
TACACAGTTTGTTGGTGGAT+TGG 0.359432 4_3:-49330708 Msa0644970:intron
GCCAGTGGAGCTGCTCATAT+TGG 0.359630 4_3:-49330620 Msa0644970:CDS
GAAAGGGAGGTTTGTGGCGG+TGG 0.361862 4_3:+49333455 None:intergenic
GTTGATGTTGGCGGAGGGGT+GGG 0.364973 4_3:+49333415 None:intergenic
TTGATGTTGGCGGAGGGGTG+GGG 0.368317 4_3:+49333416 None:intergenic
AGGAACGGAGGCGGAGGAAA+GGG 0.375690 4_3:+49333439 None:intergenic
GGCTAAAGCGGCTATTGTGC+CGG 0.384756 4_3:-49332572 Msa0644970:CDS
GCCGGGTACTTGAACAAATA+TGG 0.386249 4_3:-49331419 Msa0644970:CDS
GCCTTACTCATTATGGGATT+GGG 0.387958 4_3:-49330499 Msa0644970:CDS
TGTTGGCAAAATTCTATATC+AGG 0.388082 4_3:+49330334 None:intergenic
TTAGCTGTACTCCTCATCTC+AGG 0.388506 4_3:-49331521 Msa0644970:CDS
GTGGGGAGGAACGGAGGCGG+AGG 0.388554 4_3:+49333433 None:intergenic
GACGATTGGGTGGGTGGACT+GGG 0.392006 4_3:-49332593 Msa0644970:CDS
CTCTCATGGCAACTATCTTT+CGG 0.393083 4_3:-49330683 Msa0644970:CDS
GGTAGTTCTTCGTTAGGGTT+AGG 0.393360 4_3:-49332877 Msa0644970:CDS
GCCGGCGATTCCATCGGTTT+CGG 0.394672 4_3:-49332821 Msa0644970:CDS
CTCATAAGTAATAATGTAAC+TGG 0.395437 4_3:+49330142 None:intergenic
GAAGCCATGGTGGTGGTGAT+TGG 0.397415 4_3:+49333498 None:intergenic
TGCCATGGCTGAGCTGGTGG+CGG 0.398398 4_3:+49333237 None:intergenic
CATGCTCAGCCTTGCTACTT+GGG 0.398565 4_3:+49329953 None:intergenic
GAGTAGTTGCCATGCGTTGC+GGG 0.399074 4_3:+49333134 None:intergenic
TCCAAGAATGGCAGCAGTTA+CGG 0.399210 4_3:+49331544 None:intergenic
GAGGGGTTTGAAAATGGAAA+TGG 0.402456 4_3:+49333335 None:intergenic
GGGAATGTTGATGTTGGCGG+AGG 0.409976 4_3:+49333409 None:intergenic
GAGGTTTGTGGCGGTGGTTG+TGG 0.410074 4_3:+49333461 None:intergenic
TTGGAATGGACGGTGGAGGT+TGG 0.410765 4_3:+49333610 None:intergenic
GTTAGGGTTAGGTTATAGTT+TGG 0.413689 4_3:-49332866 Msa0644970:CDS
CTAGCAAGCTTAGGCGCATC+AGG 0.415185 4_3:+49332481 None:intergenic
TGGACGGTGGAGGTTGGGAT+TGG 0.415547 4_3:+49333616 None:intergenic
TTTGTTTGTTGGTGAGGAAT+TGG 0.416087 4_3:+49333649 None:intergenic
TCTGTAACAGTTCCAGCTAC+AGG 0.420029 4_3:+49329980 None:intergenic
AAGCCATTGGCTTGTGGTAA+AGG 0.420303 4_3:-49330358 Msa0644970:exon
CTGGGAACTCCACCATTCTT+CGG 0.421438 4_3:-49330560 Msa0644970:CDS
CTGAGGAGAAGCTTGGATCT+TGG 0.422810 4_3:-49332723 Msa0644970:CDS
GTGGGACTTTGGGTGTTTGG+AGG 0.424596 4_3:-49331584 Msa0644970:CDS
GTTGGTGAGGAATTGGTGGC+TGG 0.424673 4_3:+49333656 None:intergenic
GCTTAGCTGAGGGTGTTGCC+TGG 0.426980 4_3:-49331478 Msa0644970:CDS
ATTCGATTGGTCAGACGATT+GGG 0.427726 4_3:-49332606 Msa0644970:CDS
TGTGCCGGGTTTGGTTTCCT+TGG 0.428794 4_3:-49332557 Msa0644970:CDS
GTTGAAAGTGGAGGTGGATT+GGG 0.429015 4_3:+49333389 None:intergenic
TGGGACTTTGGGTGTTTGGA+GGG 0.429501 4_3:-49331583 Msa0644970:CDS
GAATATGCGGCTTTGTTTGT+TGG 0.431679 4_3:+49333638 None:intergenic
CCGACGAAATACACGAAGTC+TGG 0.432472 4_3:+49332683 None:intergenic
GTATTGTTAACATTGTCATC+TGG 0.433054 4_3:-49330406 Msa0644970:CDS
GAGGAACGGAGGCGGAGGAA+AGG 0.433929 4_3:+49333438 None:intergenic
CCATCGGTTTCGGCGAGGGC+TGG 0.434919 4_3:-49332811 Msa0644970:CDS
GACTGCTACTCTGTTTCTTA+CGG 0.435138 4_3:-49332410 Msa0644970:intron
TTGTCTGTTGCTACTGCTCT+GGG 0.438404 4_3:-49330578 Msa0644970:CDS
TTGTCATCTGGCTTGGACTC+GGG 0.439851 4_3:-49330394 Msa0644970:CDS
AATTCGATTGGTCAGACGAT+TGG 0.441905 4_3:-49332607 Msa0644970:CDS
AGGGAAAAGTTGGAGAAAAT+GGG 0.442246 4_3:-49332460 Msa0644970:CDS
ACTGTTATTACACAGTTTGT+TGG 0.442820 4_3:-49330716 Msa0644970:intron
GTTAACATTGTCATCTGGCT+TGG 0.443988 4_3:-49330401 Msa0644970:CDS
TGGAATTGGATCACCAAAAC+CGG 0.446224 4_3:+49332990 None:intergenic
ATGTTGGCGGAGGGGTGGGG+AGG 0.446273 4_3:+49333419 None:intergenic
CGGGATACGCCTTCAGGGGT+TGG 0.447455 4_3:+49333153 None:intergenic
ACAAATATGGTCTCATCTCT+TGG 0.449006 4_3:-49331406 Msa0644970:CDS
GCGGAGGAAAGGGAGGTTTG+TGG 0.450939 4_3:+49333449 None:intergenic
GCTGCCCTCATTGCAATGGC+CGG 0.451401 4_3:-49331437 Msa0644970:CDS
ACCAATATGAGCAGCTCCAC+TGG 0.452807 4_3:+49330619 None:intergenic
AAGCCATGGTGGTGGTGATT+GGG 0.454677 4_3:+49333499 None:intergenic
ATTGTCATCTGGCTTGGACT+CGG 0.455077 4_3:-49330395 Msa0644970:CDS
GGAGGGGTGGGGAGGAACGG+AGG 0.457542 4_3:+49333427 None:intergenic
TTAATGGCGGCGCCTTGCCA+TGG 0.460022 4_3:+49333222 None:intergenic
GGCGGAGGGGTGGGGAGGAA+CGG 0.461032 4_3:+49333424 None:intergenic
CTCCACTGGCAAAGAAGTAA+TGG 0.462263 4_3:+49330633 None:intergenic
GGGGTGGGGAGGAACGGAGG+CGG 0.464064 4_3:+49333430 None:intergenic
GTTTGTGGCGGTGGTTGTGG+TGG 0.464201 4_3:+49333464 None:intergenic
GCTGTGGCAATTCTAGGTTT+AGG 0.465290 4_3:-49333057 Msa0644970:CDS
CTGATGCGCCTAAGCTTGCT+AGG 0.465728 4_3:-49332480 Msa0644970:CDS
GGAATGTTGATGTTGGCGGA+GGG 0.465921 4_3:+49333410 None:intergenic
GGAAGCTGATGAGGCTTTAA+CGG 0.466760 4_3:+49333290 None:intergenic
GATTCCATCGGTTTCGGCGA+GGG 0.467567 4_3:-49332815 Msa0644970:CDS
GCCACAGCGCCGAGTGGGAG+TGG 0.468446 4_3:+49333072 None:intergenic
TCGGTTTCGGCGAGGGCTGG+TGG 0.468917 4_3:-49332808 Msa0644970:CDS
AGTTGAAAGTGGAGGTGGAT+TGG 0.469611 4_3:+49333388 None:intergenic
TCCCATTACTTCTTTGCCAG+TGG 0.471089 4_3:-49330635 Msa0644970:CDS
AGATACTGCATCCCTGTAGC+TGG 0.471226 4_3:-49329992 Msa0644970:three_prime_UTR
ATTGGGAATGTTGATGTTGG+CGG 0.471769 4_3:+49333406 None:intergenic
CCACCAGCTCAGCCATGGCA+AGG 0.471989 4_3:-49333234 Msa0644970:CDS
ACCGGAAAATGCTGCAACAA+AGG 0.472343 4_3:+49333008 None:intergenic
CGTTGCGGGATACGCCTTCA+GGG 0.472773 4_3:+49333148 None:intergenic
CTGCCCTCATTGCAATGGCC+GGG 0.473064 4_3:-49331436 Msa0644970:CDS
GCTGGTGGCGGAGCTGGTGA+TGG 0.475242 4_3:+49333249 None:intergenic
AAAGCCATAACCCCACCATT+TGG 0.475376 4_3:+49330436 None:intergenic
CAAAGATCTAAAACGATCAA+TGG 0.479299 4_3:+49330171 None:intergenic
TCCACTGGCAAAGAAGTAAT+GGG 0.480397 4_3:+49330634 None:intergenic
ACTCTTACTTTGAATTCGAT+TGG 0.483168 4_3:-49332619 Msa0644970:CDS
TTTGAAGTTGAAAGTGGAGG+TGG 0.485935 4_3:+49333383 None:intergenic
ACCCAATCCCATAATGAGTA+AGG 0.489058 4_3:+49330498 None:intergenic
TCTATTTGGTGGAAAGCCAT+TGG 0.490613 4_3:-49330371 Msa0644970:CDS
GTTGCTTGTGGAAGTAATGT+TGG 0.490862 4_3:-49332754 Msa0644970:CDS
AGCCATTGGCTTGTGGTAAA+GGG 0.492080 4_3:-49330357 Msa0644970:exon
CAAACCATTAATACAAAAGT+TGG 0.492179 4_3:+49333760 None:intergenic
TTTGGCAAGTGGAACATAGT+TGG 0.494233 4_3:+49330454 None:intergenic
TCCTCACCGGATTAATACTC+TGG 0.494912 4_3:-49333182 Msa0644970:CDS
TGGATTGGGAATGTTGATGT+TGG 0.495199 4_3:+49333403 None:intergenic
CTTAGCTGAGGGTGTTGCCT+GGG 0.499437 4_3:-49331477 Msa0644970:CDS
TTATTAGAAGAAATTTAGAA+TGG 0.499768 4_3:+49333552 None:intergenic
AGGGGTTTGAAAATGGAAAT+GGG 0.501403 4_3:+49333336 None:intergenic
GTTATTACACAGTTTGTTGG+TGG 0.503396 4_3:-49330713 Msa0644970:intron
AATGAGTAAGGCCTCCCATA+AGG 0.503838 4_3:+49330510 None:intergenic
GTTTGTTGGTGAGGAATTGG+TGG 0.505126 4_3:+49333652 None:intergenic
TAAGCTTGCTAGGGAAAAGT+TGG 0.505518 4_3:-49332470 Msa0644970:CDS
TATTAGAAGAAATTTAGAAT+GGG 0.506372 4_3:+49333553 None:intergenic
AACACCATGGCTCCGAAGAA+TGG 0.506954 4_3:+49330548 None:intergenic
GAGGGGTTTGAAGTTGAAAG+TGG 0.511040 4_3:+49333377 None:intergenic
GAGGAAAGGGAGGTTTGTGG+CGG 0.511368 4_3:+49333452 None:intergenic
TGTAGATTTATACGGGAACC+TGG 0.511557 4_3:-49330197 Msa0644970:three_prime_UTR
TTGGTGGATTGGGTCTCTCA+TGG 0.513027 4_3:-49330697 Msa0644970:CDS
AAGTCTCTTTGTGTTGCTTG+TGG 0.513639 4_3:-49332766 Msa0644970:CDS
AGTAATGGGAGTAGAAGTAG+AGG 0.513935 4_3:+49330648 None:intergenic
TTGGACTCGGGTCTATTTGG+TGG 0.514343 4_3:-49330382 Msa0644970:CDS
TAAAACGATCAATGGTATCC+AGG 0.514415 4_3:+49330179 None:intergenic
GCTAAAGCGGCTATTGTGCC+GGG 0.517173 4_3:-49332571 Msa0644970:CDS
AAACCACGTGAGAGTATCCC+AGG 0.517350 4_3:+49331460 None:intergenic
CTCCGCCACCAGCTCAGCCA+TGG 0.520588 4_3:-49333239 Msa0644970:CDS
AGATGTGTGAATTGATTTGA+GGG 0.522064 4_3:+49333359 None:intergenic
TGGTTCGTTCCAACCCCTGA+AGG 0.522278 4_3:-49333162 Msa0644970:CDS
TCCACCATTCTTCGGAGCCA+TGG 0.524824 4_3:-49330552 Msa0644970:CDS
AAAACCAAGGAAACCAAACC+CGG 0.525935 4_3:+49332553 None:intergenic
GAATGTTGATGTTGGCGGAG+GGG 0.526533 4_3:+49333411 None:intergenic
GGATTTGGAATGGACGGTGG+AGG 0.527726 4_3:+49333606 None:intergenic
CCAGCCCTCGCCGAAACCGA+TGG 0.527916 4_3:+49332811 None:intergenic
GAGATGTGTGAATTGATTTG+AGG 0.528146 4_3:+49333358 None:intergenic
GGTTGTGGTGGTGAGAGGAA+TGG 0.529022 4_3:+49333476 None:intergenic
TAGCTGTACTCCTCATCTCA+GGG 0.532808 4_3:-49331520 Msa0644970:CDS
ATCGTTGGATTTGGAATGGA+CGG 0.533141 4_3:+49333600 None:intergenic
GCCGAAACCGATGGAATCGC+CGG 0.533403 4_3:+49332820 None:intergenic
CCGGAAAATGCTGCAACAAA+GGG 0.534036 4_3:+49333009 None:intergenic
TGCGGCTTTGTTTGTTGGTG+AGG 0.537796 4_3:+49333643 None:intergenic
TGTTCCACTTGCCAAATGGT+GGG 0.537877 4_3:-49330447 Msa0644970:CDS
ACTATGTTCCACTTGCCAAA+TGG 0.539221 4_3:-49330451 Msa0644970:CDS
CTAGATGTACTATTCGCAAA+GGG 0.541449 4_3:-49329908 None:intergenic
AACGAACCAGAGTATTAATC+CGG 0.544105 4_3:+49333176 None:intergenic
ACCATATTTGTTCAAGTACC+CGG 0.544916 4_3:+49331418 None:intergenic
CCAGACTTCGTGTATTTCGT+CGG 0.546760 4_3:-49332683 Msa0644970:CDS
GAGATTTGAGTGTGGATCGT+TGG 0.549213 4_3:+49333585 None:intergenic
CAACTACTCGCAATCTTCCT+CGG 0.550700 4_3:-49333120 Msa0644970:CDS
AGTAAGGCCTCCCATAAGGT+TGG 0.553168 4_3:+49330514 None:intergenic
TGGTCAGACGATTGGGTGGG+TGG 0.554578 4_3:-49332599 Msa0644970:CDS
GCGGTGGTTGTGGTGGTGAG+AGG 0.555216 4_3:+49333471 None:intergenic
GTACCCGGCCATTGCAATGA+GGG 0.555519 4_3:+49331433 None:intergenic
GTGGATCGTTGGATTTGGAA+TGG 0.556846 4_3:+49333596 None:intergenic
ACCATGGCTCCGAAGAATGG+TGG 0.558163 4_3:+49330551 None:intergenic
AAGGCGTATCCCGCAACGCA+TGG 0.558343 4_3:-49333143 Msa0644970:CDS
GTTAGCGCCGGCGATTCCAT+CGG 0.559030 4_3:-49332827 Msa0644970:CDS
CGAGTAGTTGCCATGCGTTG+CGG 0.559108 4_3:+49333133 None:intergenic
GAATTGCCACAGCGCCGAGT+GGG 0.559821 4_3:+49333067 None:intergenic
GTGCCGTGAGAGTGAAGTTG+AGG 0.559860 4_3:+49333527 None:intergenic
ATGTTCCACTTGCCAAATGG+TGG 0.562922 4_3:-49330448 Msa0644970:CDS
CCTTGCCATGGCTGAGCTGG+TGG 0.564849 4_3:+49333234 None:intergenic
GTTTGCTGCCCTCATTGCAA+TGG 0.568959 4_3:-49331441 Msa0644970:CDS
TCATCTCAGGGGTTGTAACA+TGG 0.568969 4_3:-49331508 Msa0644970:CDS
TGGTGTGATGGAAGCTGATG+AGG 0.569002 4_3:+49333281 None:intergenic
AAAGTAAGAGTGGCACATAA+CGG 0.570050 4_3:+49332631 None:intergenic
TGTGGAAGTAATGTTGGTGA+TGG 0.570062 4_3:-49332748 Msa0644970:CDS
TGATTATTTCTAGAAAGCAT+AGG 0.570983 4_3:+49330234 None:intergenic
GAGTACAGCTAATCCAAGAA+TGG 0.571107 4_3:+49331532 None:intergenic
CTGTAACAGTTCCAGCTACA+GGG 0.573569 4_3:+49329981 None:intergenic
AAAATGCTGCAACAAAGGGT+AGG 0.573942 4_3:+49333013 None:intergenic
GGCCCTTTACCACAAGCCAA+TGG 0.574870 4_3:+49330355 None:intergenic
GTTCCACTTGCCAAATGGTG+GGG 0.575270 4_3:-49330446 Msa0644970:CDS
GATGGGACTGAGGAGAAGCT+TGG 0.578401 4_3:-49332730 Msa0644970:CDS
GCTGGTGATGGAGACGAAGC+TGG 0.579058 4_3:+49333261 None:intergenic
TAGTGAAGCATTGTTAGCGC+CGG 0.581277 4_3:-49332839 Msa0644970:CDS
AAATGCTGCAACAAAGGGTA+GGG 0.581318 4_3:+49333014 None:intergenic
TAACCCCACCATTTGGCAAG+TGG 0.583744 4_3:+49330443 None:intergenic
TGGAGACGAAGCTGGTGTGA+TGG 0.584492 4_3:+49333269 None:intergenic
TTCTAGAAATAATCATTGAG+AGG 0.585785 4_3:-49330226 Msa0644970:three_prime_UTR
CGATTGGTCAGACGATTGGG+TGG 0.589544 4_3:-49332603 Msa0644970:CDS
GTTCAGTCAAACTGTAGTCA+AGG 0.591753 4_3:-49331384 Msa0644970:intron
GTGGGTGGACTGGGCTAAAG+CGG 0.593753 4_3:-49332584 Msa0644970:CDS
AACGGAGGCGGAGGAAAGGG+AGG 0.596414 4_3:+49333442 None:intergenic
CGATTCCATCGGTTTCGGCG+AGG 0.599655 4_3:-49332816 Msa0644970:CDS
TTCCTCTCCAACCTTATGGG+AGG 0.599715 4_3:-49330521 Msa0644970:CDS
CTCATAGCATCAATCCTCAC+CGG 0.602088 4_3:-49333195 Msa0644970:CDS
ATCACACAACCACTCCCACT+CGG 0.602206 4_3:-49333081 Msa0644970:CDS
GGCCTCCCATAAGGTTGGAG+AGG 0.603882 4_3:+49330519 None:intergenic
ATCTTCCTCGGAACTATCGT+CGG 0.607025 4_3:-49333108 Msa0644970:CDS
AAAGCTAAACAAATCAACCA+TGG 0.616605 4_3:+49332970 None:intergenic
GATTGGTCAGACGATTGGGT+GGG 0.616770 4_3:-49332602 Msa0644970:CDS
ACCACTCCCACTCGGCGCTG+TGG 0.617799 4_3:-49333073 Msa0644970:CDS
ACAGATAAACCCAAGTAGCA+AGG 0.617843 4_3:-49329962 Msa0644970:three_prime_UTR
AGGCTTTAACGGTGAGAGTG+TGG 0.620085 4_3:+49333301 None:intergenic
GTGGAAGTAATGTTGGTGAT+GGG 0.620357 4_3:-49332747 Msa0644970:CDS
ATGGAAAGAGTGCTTAGCTG+AGG 0.620669 4_3:-49331489 Msa0644970:CDS
ACTCCTCAACTTCACTCTCA+CGG 0.625452 4_3:-49333530 Msa0644970:five_prime_UTR
ACTAGATGTACTATTCGCAA+AGG 0.625825 4_3:-49329909 Msa0644970:three_prime_UTR
AATCGAATTCAAAGTAAGAG+TGG 0.626427 4_3:+49332621 None:intergenic
TAATGTTGGTGATGGGACTG+AGG 0.627098 4_3:-49332740 Msa0644970:CDS
AGTACCCGGCCATTGCAATG+AGG 0.629202 4_3:+49331432 None:intergenic
ATGTTACAACCCCTGAGATG+AGG 0.630520 4_3:+49331510 None:intergenic
GATGTGTGAATTGATTTGAG+GGG 0.631660 4_3:+49333360 None:intergenic
GGTGAGAGGAATGGAAGCCA+TGG 0.635429 4_3:+49333485 None:intergenic
TGATGCGCCTAAGCTTGCTA+GGG 0.635438 4_3:-49332479 Msa0644970:CDS
TGGAAAGAGTGCTTAGCTGA+GGG 0.636445 4_3:-49331488 Msa0644970:CDS
GGGTTTGAAGTTGAAAGTGG+AGG 0.640329 4_3:+49333380 None:intergenic
TAAATAATATACAAAATCAA+CGG 0.641413 4_3:+49332526 None:intergenic
GGTGGAAAGCCATTGGCTTG+TGG 0.643800 4_3:-49330364 Msa0644970:CDS
GAGAGGAATGGAAGCCATGG+TGG 0.647901 4_3:+49333488 None:intergenic
AGGAATGGAAGCCATGGTGG+TGG 0.648820 4_3:+49333491 None:intergenic
GTTGCGGGATACGCCTTCAG+GGG 0.648907 4_3:+49333149 None:intergenic
GTTGGATTTGGAATGGACGG+TGG 0.651084 4_3:+49333603 None:intergenic
TGCTATGAGTGGTTTAATGG+CGG 0.652212 4_3:+49333209 None:intergenic
GGGAAAAGTTGGAGAAAATG+GGG 0.653437 4_3:-49332459 Msa0644970:CDS
AGAATTGCCACAGCGCCGAG+TGG 0.654008 4_3:+49333066 None:intergenic
GGACTAGATTTCAACGTCGG+AGG 0.655352 4_3:+49332502 None:intergenic
ACACAAAGAGACTTAACCAA+AGG 0.656993 4_3:+49332775 None:intergenic
CAAGTTGTCAAAGTCGAGCG+AGG 0.658869 4_3:-49333704 Msa0644970:five_prime_UTR
AGCTGTACTCCTCATCTCAG+GGG 0.662859 4_3:-49331519 Msa0644970:CDS
GTGAGGATTGATGCTATGAG+TGG 0.673480 4_3:+49333198 None:intergenic
AATCCCAATCACCACCACCA+TGG 0.676558 4_3:-49333502 Msa0644970:exon
AATCAACGGTACCAAAACCA+AGG 0.678702 4_3:+49332540 None:intergenic
TCACAAATTGATACGCAACA+CGG 0.686307 4_3:+49332908 None:intergenic
GAGGTTGGGATTGGAATATG+CGG 0.697128 4_3:+49333625 None:intergenic
TGATTCCGACGATAGTTCCG+AGG 0.697476 4_3:+49333103 None:intergenic
TTGCCTGGGATACTCTCACG+TGG 0.701370 4_3:-49331463 Msa0644970:CDS
TCAGGACTAGATTTCAACGT+CGG 0.702776 4_3:+49332499 None:intergenic
ACCAGAGTATTAATCCGGTG+AGG 0.706096 4_3:+49333181 None:intergenic
GGAGAGGAATGACAACACCA+TGG 0.744875 4_3:+49330535 None:intergenic
ATGTGAGCGAGATTTGAGTG+TGG 0.769471 4_3:+49333577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAATATACAAAATCAA+CGG + chr4_3:49331143-49331162 None:intergenic 10.0%
!!! TTAAATTTGTTTTCTAAATT+AGG - chr4_3:49331742-49331761 Msa0644970:intron 10.0%
!!! TATTAGAAGAAATTTAGAAT+GGG + chr4_3:49330116-49330135 None:intergenic 15.0%
!! TTATTAGAAGAAATTTAGAA+TGG + chr4_3:49330117-49330136 None:intergenic 15.0%
!! TTAGAAAACAAATTTAAAGA+CGG + chr4_3:49331739-49331758 None:intergenic 15.0%
!! CAAAAAAAAACTAAATTCTA+AGG + chr4_3:49332028-49332047 None:intergenic 15.0%
!!! CTTAGAATTTAGTTTTTTTT+TGG - chr4_3:49332026-49332045 Msa0644970:intron 15.0%
!!! AATTGCTATTTTCATTTTAA+TGG - chr4_3:49333625-49333644 Msa0644970:five_prime_UTR 15.0%
!!! ATTGCTATTTTCATTTTAAT+GGG - chr4_3:49333626-49333645 Msa0644970:five_prime_UTR 15.0%
!!! TTTGTTTTGTAATTTAGTGA+CGG - chr4_3:49329925-49329944 Msa0644970:three_prime_UTR 20.0%
!! TAGAGTATAAACATGAAATT+GGG - chr4_3:49331325-49331344 Msa0644970:intron 20.0%
!! TTTCAAAAATCAAAACTAAC+CGG + chr4_3:49331415-49331434 None:intergenic 20.0%
!!! ATTGGCTTTTCTTAAAATTT+GGG + chr4_3:49331455-49331474 None:intergenic 20.0%
!!! AGTTAACATTTGATTTCAAA+AGG + chr4_3:49331547-49331566 None:intergenic 20.0%
!!! AATTTGTTTTCTAAATTAGG+CGG - chr4_3:49331745-49331764 Msa0644970:intron 20.0%
!! TTTAATAAATATTACACTCG+AGG + chr4_3:49332332-49332351 None:intergenic 20.0%
!!! TTAGCTTTTTTCTTTGCTAA+AGG - chr4_3:49330711-49330730 Msa0644970:intron 25.0%
!! TATCAATTTGTGAAGCTTTT+TGG - chr4_3:49330768-49330787 Msa0644970:intron 25.0%
! GTAGAGTATAAACATGAAAT+TGG - chr4_3:49331324-49331343 Msa0644970:intron 25.0%
!!! TGATTTTTGAAAGATTGAGT+TGG - chr4_3:49331423-49331442 Msa0644970:CDS 25.0%
!!! CTTTTCTTAAAATTTGGGTT+AGG + chr4_3:49331450-49331469 None:intergenic 25.0%
!!! GATTGGCTTTTCTTAAAATT+TGG + chr4_3:49331456-49331475 None:intergenic 25.0%
!! CATTTGATTTCAAAAGGTTA+TGG + chr4_3:49331541-49331560 None:intergenic 25.0%
! GTTAACTGTATATAGTAGAA+TGG - chr4_3:49331560-49331579 Msa0644970:CDS 25.0%
! GTCAAATAATCATAAAAAGC+TGG + chr4_3:49332539-49332558 None:intergenic 25.0%
! TCTAGTAAGTAATGATTGAT+CGG - chr4_3:49332568-49332587 Msa0644970:CDS 25.0%
! TATTTATATGTGGATATGCT+TGG - chr4_3:49332726-49332745 Msa0644970:CDS 25.0%
! TTCTTTCATTGACATAATCA+AGG + chr4_3:49332924-49332943 None:intergenic 25.0%
!!! TGATTATTTCTAGAAAGCAT+AGG + chr4_3:49333435-49333454 None:intergenic 25.0%
!! TTCTAGAAATAATCATTGAG+AGG - chr4_3:49333440-49333459 Msa0644970:CDS 25.0%
!!! GGTTTTGTTGTAGATTTATA+CGG - chr4_3:49333461-49333480 Msa0644970:CDS 25.0%
!!! GTTTTGTTGTAGATTTATAC+GGG - chr4_3:49333462-49333481 Msa0644970:CDS 25.0%
!!! ATTGATCGTTTTAGATCTTT+GGG - chr4_3:49333497-49333516 Msa0644970:exon 25.0%
! CTCATAAGTAATAATGTAAC+TGG + chr4_3:49333527-49333546 None:intergenic 25.0%
! CAATTGTACTGAAATCTTTA+TGG + chr4_3:49333610-49333629 None:intergenic 25.0%
!!! CTATTTTCATTTTAATGGGA+TGG - chr4_3:49333630-49333649 Msa0644970:five_prime_UTR 25.0%
!! AGATGTGTGAATTGATTTGA+GGG + chr4_3:49330310-49330329 None:intergenic 30.0%
AAACAAATCAACCATGGAAT+TGG + chr4_3:49330693-49330712 None:intergenic 30.0%
AAAGCTAAACAAATCAACCA+TGG + chr4_3:49330699-49330718 None:intergenic 30.0%
!! GCTAAAGGTTTTATCAAAAC+TGG - chr4_3:49330726-49330745 Msa0644970:intron 30.0%
!! GGTTTTATCAAAACTGGATT+AGG - chr4_3:49330732-49330751 Msa0644970:intron 30.0%
!! TTTTTGGTAGTTCTTCGTTA+GGG - chr4_3:49330784-49330803 Msa0644970:intron 30.0%
!!! TGGTGGAATTTTTTTACCTT+TGG - chr4_3:49330875-49330894 Msa0644970:intron 30.0%
AATCGAATTCAAAGTAAGAG+TGG + chr4_3:49331048-49331067 None:intergenic 30.0%
ACTCTTACTTTGAATTCGAT+TGG - chr4_3:49331047-49331066 Msa0644970:intron 30.0%
! ATTTTCTCATTAGTCGTCAT+AGG + chr4_3:49331233-49331252 None:intergenic 30.0%
!!! GGTAGATAACTTCACTTTTT+TGG - chr4_3:49331346-49331365 Msa0644970:intron 30.0%
TGAGTGAACTGTAAATCATT+AGG - chr4_3:49331691-49331710 Msa0644970:intron 30.0%
AACTGTAAATCATTAGGCAT+TGG - chr4_3:49331697-49331716 Msa0644970:intron 30.0%
!!! GATTAGTTTTGAAGACCAAT+AGG + chr4_3:49331779-49331798 None:intergenic 30.0%
TCCATATTTGCCAGAAATTT+CGG + chr4_3:49331847-49331866 None:intergenic 30.0%
TTTAAAAAAGATCCGCTACT+CGG + chr4_3:49331929-49331948 None:intergenic 30.0%
TATACCTTGTGTCTTGATTA+AGG - chr4_3:49331977-49331996 Msa0644970:intron 30.0%
ACATATAAATACCAGAGGAA+GGG + chr4_3:49332717-49332736 None:intergenic 30.0%
TATCCACATATAAATACCAG+AGG + chr4_3:49332722-49332741 None:intergenic 30.0%
!!! GTTTTAATTTTGTCCACTCA+AGG - chr4_3:49332748-49332767 Msa0644970:CDS 30.0%
AATAAATAGCATCTCTTCAG+TGG + chr4_3:49332812-49332831 None:intergenic 30.0%
ACTGTTATTACACAGTTTGT+TGG - chr4_3:49332950-49332969 Msa0644970:CDS 30.0%
GTATTGTTAACATTGTCATC+TGG - chr4_3:49333260-49333279 Msa0644970:CDS 30.0%
TGTTGGCAAAATTCTATATC+AGG + chr4_3:49333335-49333354 None:intergenic 30.0%
GCAAAAATCTTAAAGTGTGT+TGG + chr4_3:49333352-49333371 None:intergenic 30.0%
! CAAAGATCTAAAACGATCAA+TGG + chr4_3:49333498-49333517 None:intergenic 30.0%
!! CATTGATCGTTTTAGATCTT+TGG - chr4_3:49333496-49333515 Msa0644970:exon 30.0%
!! GTAAACACATCTTGTTATTC+AGG - chr4_3:49333549-49333568 Msa0644970:five_prime_UTR 30.0%
! TTTGTTTGTTGGTGAGGAAT+TGG + chr4_3:49330020-49330039 None:intergenic 35.0%
!! GATGTGTGAATTGATTTGAG+GGG + chr4_3:49330309-49330328 None:intergenic 35.0%
!! GAGATGTGTGAATTGATTTG+AGG + chr4_3:49330311-49330330 None:intergenic 35.0%
AGGGGTTTGAAAATGGAAAT+GGG + chr4_3:49330333-49330352 None:intergenic 35.0%
TGAAATGAGGGGTTTGAAAA+TGG + chr4_3:49330340-49330359 None:intergenic 35.0%
TGATGCTATGAGTGGTTTAA+TGG + chr4_3:49330463-49330482 None:intergenic 35.0%
! AACGAACCAGAGTATTAATC+CGG + chr4_3:49330493-49330512 None:intergenic 35.0%
TCACAAATTGATACGCAACA+CGG + chr4_3:49330761-49330780 None:intergenic 35.0%
!! CTTTTTGGTAGTTCTTCGTT+AGG - chr4_3:49330783-49330802 Msa0644970:intron 35.0%
GTTAGGGTTAGGTTATAGTT+TGG - chr4_3:49330800-49330819 Msa0644970:intron 35.0%
ACACAAAGAGACTTAACCAA+AGG + chr4_3:49330894-49330913 None:intergenic 35.0%
AAAGTAAGAGTGGCACATAA+CGG + chr4_3:49331038-49331057 None:intergenic 35.0%
TAGGGAAAAGTTGGAGAAAA+TGG - chr4_3:49331205-49331224 Msa0644970:intron 35.0%
AGGGAAAAGTTGGAGAAAAT+GGG - chr4_3:49331206-49331225 Msa0644970:intron 35.0%
AGCCAATCTATATGCAAAGT+CGG - chr4_3:49331468-49331487 Msa0644970:CDS 35.0%
TGGCATCATAAGTTTGTGTT+GGG + chr4_3:49331510-49331529 None:intergenic 35.0%
AAAAGGTTATGGCACAAAAG+TGG + chr4_3:49331530-49331549 None:intergenic 35.0%
! TTGTTTCTCAACTGTTCTGT+TGG - chr4_3:49331585-49331604 Msa0644970:CDS 35.0%
TGTTTCTCAACTGTTCTGTT+GGG - chr4_3:49331586-49331605 Msa0644970:CDS 35.0%
!!! TAGTTTTGAAGACCAATAGG+AGG + chr4_3:49331776-49331795 None:intergenic 35.0%
CAGAAATTTCGGCAATATCA+AGG + chr4_3:49331836-49331855 None:intergenic 35.0%
CTTGATATTGCCGAAATTTC+TGG - chr4_3:49331834-49331853 Msa0644970:intron 35.0%
TTCACCTTAATCAAGACACA+AGG + chr4_3:49331984-49332003 None:intergenic 35.0%
ACCATATTTGTTCAAGTACC+CGG + chr4_3:49332251-49332270 None:intergenic 35.0%
ACAAATATGGTCTCATCTCT+TGG - chr4_3:49332260-49332279 Msa0644970:intron 35.0%
TATTTCAAAACATGCTCCAG+TGG + chr4_3:49332493-49332512 None:intergenic 35.0%
CACATATAAATACCAGAGGA+AGG + chr4_3:49332718-49332737 None:intergenic 35.0%
CTTCCTCTGGTATTTATATG+TGG - chr4_3:49332716-49332735 Msa0644970:CDS 35.0%
TGGCAATTATTAGGACTCAT+AGG + chr4_3:49332792-49332811 None:intergenic 35.0%
TCTCTTCAGTGGCAATTATT+AGG + chr4_3:49332801-49332820 None:intergenic 35.0%
!! AGCACGTTGGTAATATTGTA+TGG + chr4_3:49332862-49332881 None:intergenic 35.0%
TACTCAAAAATGTAGCACGT+TGG + chr4_3:49332875-49332894 None:intergenic 35.0%
!! GTTATTACACAGTTTGTTGG+TGG - chr4_3:49332953-49332972 Msa0644970:CDS 35.0%
TAAAACGATCAATGGTATCC+AGG + chr4_3:49333490-49333509 None:intergenic 35.0%
!! GAATATGCGGCTTTGTTTGT+TGG + chr4_3:49330031-49330050 None:intergenic 40.0%
! ATCGTTGGATTTGGAATGGA+CGG + chr4_3:49330069-49330088 None:intergenic 40.0%
ATTGGGAATGTTGATGTTGG+CGG + chr4_3:49330263-49330282 None:intergenic 40.0%
! TGGATTGGGAATGTTGATGT+TGG + chr4_3:49330266-49330285 None:intergenic 40.0%
! TTTGAAGTTGAAAGTGGAGG+TGG + chr4_3:49330286-49330305 None:intergenic 40.0%
GAGGGGTTTGAAAATGGAAA+TGG + chr4_3:49330334-49330353 None:intergenic 40.0%
!!! AGTGTGGCGTTTTGAAATGA+GGG + chr4_3:49330352-49330371 None:intergenic 40.0%
TGCTATGAGTGGTTTAATGG+CGG + chr4_3:49330460-49330479 None:intergenic 40.0%
AAATGCTGCAACAAAGGGTA+GGG + chr4_3:49330655-49330674 None:intergenic 40.0%
AAAATGCTGCAACAAAGGGT+AGG + chr4_3:49330656-49330675 None:intergenic 40.0%
TGGAATTGGATCACCAAAAC+CGG + chr4_3:49330679-49330698 None:intergenic 40.0%
!! GTTTTGGTGATCCAATTCCA+TGG - chr4_3:49330679-49330698 Msa0644970:CDS 40.0%
!! AAGTCTCTTTGTGTTGCTTG+TGG - chr4_3:49330900-49330919 Msa0644970:intron 40.0%
GTTGCTTGTGGAAGTAATGT+TGG - chr4_3:49330912-49330931 Msa0644970:intron 40.0%
! TGTGGAAGTAATGTTGGTGA+TGG - chr4_3:49330918-49330937 Msa0644970:intron 40.0%
!! GTGGAAGTAATGTTGGTGAT+GGG - chr4_3:49330919-49330938 Msa0644970:intron 40.0%
! AATTCGATTGGTCAGACGAT+TGG - chr4_3:49331059-49331078 Msa0644970:intron 40.0%
! ATTCGATTGGTCAGACGATT+GGG - chr4_3:49331060-49331079 Msa0644970:intron 40.0%
AAAACCAAGGAAACCAAACC+CGG + chr4_3:49331116-49331135 None:intergenic 40.0%
AATCAACGGTACCAAAACCA+AGG + chr4_3:49331129-49331148 None:intergenic 40.0%
TCAGGACTAGATTTCAACGT+CGG + chr4_3:49331170-49331189 None:intergenic 40.0%
! AACTTTTCCCTAGCAAGCTT+AGG + chr4_3:49331197-49331216 None:intergenic 40.0%
!! TAAGCTTGCTAGGGAAAAGT+TGG - chr4_3:49331196-49331215 Msa0644970:intron 40.0%
GGGAAAAGTTGGAGAAAATG+GGG - chr4_3:49331207-49331226 Msa0644970:intron 40.0%
! GACTGCTACTCTGTTTCTTA+CGG - chr4_3:49331256-49331275 Msa0644970:intron 40.0%
! CTGTTTGCTAAGTTACATGC+CGG - chr4_3:49331393-49331412 Msa0644970:CDS 40.0%
! GACCGACTTTGCATATAGAT+TGG + chr4_3:49331473-49331492 None:intergenic 40.0%
GGCATCATAAGTTTGTGTTG+GGG + chr4_3:49331509-49331528 None:intergenic 40.0%
GTGGCATCATAAGTTTGTGT+TGG + chr4_3:49331511-49331530 None:intergenic 40.0%
AGCATCCAATTTGCATTGCT+GGG - chr4_3:49331630-49331649 Msa0644970:intron 40.0%
TGGTCATTAGACAGATGTTG+TGG - chr4_3:49331654-49331673 Msa0644970:intron 40.0%
!! GCCGAAATTTCTGGCAAATA+TGG - chr4_3:49331843-49331862 Msa0644970:intron 40.0%
AATGCAACTACTGCTAGACA+AGG + chr4_3:49331953-49331972 None:intergenic 40.0%
! TGGTAAAATTGAGTGACGGA+TGG + chr4_3:49332061-49332080 None:intergenic 40.0%
! ATCCGTCACTCAATTTTACC+AGG - chr4_3:49332060-49332079 Msa0644970:intron 40.0%
CACCTGGTAAAATTGAGTGA+CGG + chr4_3:49332065-49332084 None:intergenic 40.0%
! GTCACTCAATTTTACCAGGT+GGG - chr4_3:49332064-49332083 Msa0644970:intron 40.0%
! AATTTTACCAGGTGGGACTT+TGG - chr4_3:49332071-49332090 Msa0644970:intron 40.0%
! ATTTTACCAGGTGGGACTTT+GGG - chr4_3:49332072-49332091 Msa0644970:intron 40.0%
GAGTACAGCTAATCCAAGAA+TGG + chr4_3:49332137-49332156 None:intergenic 40.0%
GTTCAGTCAAACTGTAGTCA+AGG - chr4_3:49332282-49332301 Msa0644970:intron 40.0%
TTTGCCTTTCATCTGTTCTC+TGG - chr4_3:49332394-49332413 Msa0644970:intron 40.0%
TTGCCTTTCATCTGTTCTCT+GGG - chr4_3:49332395-49332414 Msa0644970:intron 40.0%
!! ATCTGTTCTCTGGGGTAAAA+TGG - chr4_3:49332404-49332423 Msa0644970:intron 40.0%
ATCAGGCATCTTGGTTCATT+TGG - chr4_3:49332622-49332641 Msa0644970:CDS 40.0%
TCAGGCATCTTGGTTCATTT+GGG - chr4_3:49332623-49332642 Msa0644970:CDS 40.0%
ATGCTGATCAACTCAGAAGT+AGG + chr4_3:49332658-49332677 None:intergenic 40.0%
GTTGATCAGCATCTGTTTCA+TGG - chr4_3:49332666-49332685 Msa0644970:CDS 40.0%
TATAAATACCAGAGGAAGGG+AGG + chr4_3:49332714-49332733 None:intergenic 40.0%
!! TACACAGTTTGTTGGTGGAT+TGG - chr4_3:49332958-49332977 Msa0644970:CDS 40.0%
!! ACACAGTTTGTTGGTGGATT+GGG - chr4_3:49332959-49332978 Msa0644970:CDS 40.0%
CTCTCATGGCAACTATCTTT+CGG - chr4_3:49332983-49333002 Msa0644970:CDS 40.0%
GCAACTATCTTTCGGTATTC+TGG - chr4_3:49332991-49333010 Msa0644970:CDS 40.0%
! AGTAATGGGAGTAGAAGTAG+AGG + chr4_3:49333021-49333040 None:intergenic 40.0%
TCCACTGGCAAAGAAGTAAT+GGG + chr4_3:49333035-49333054 None:intergenic 40.0%
TCATTCCTCTCCAACCTTAT+GGG - chr4_3:49333142-49333161 Msa0644970:CDS 40.0%
GCCTTACTCATTATGGGATT+GGG - chr4_3:49333167-49333186 Msa0644970:CDS 40.0%
ACCCAATCCCATAATGAGTA+AGG + chr4_3:49333171-49333190 None:intergenic 40.0%
! TAGTTGGCACCGAAAAATAC+TGG + chr4_3:49333199-49333218 None:intergenic 40.0%
TTTGGCAAGTGGAACATAGT+TGG + chr4_3:49333215-49333234 None:intergenic 40.0%
ACTATGTTCCACTTGCCAAA+TGG - chr4_3:49333215-49333234 Msa0644970:CDS 40.0%
GTTAACATTGTCATCTGGCT+TGG - chr4_3:49333265-49333284 Msa0644970:CDS 40.0%
! TCTATTTGGTGGAAAGCCAT+TGG - chr4_3:49333295-49333314 Msa0644970:CDS 40.0%
TGTAGATTTATACGGGAACC+TGG - chr4_3:49333469-49333488 Msa0644970:CDS 40.0%
ACAGATAAACCCAAGTAGCA+AGG - chr4_3:49333704-49333723 Msa0644970:five_prime_UTR 40.0%
! GTTTGTTGGTGAGGAATTGG+TGG + chr4_3:49330017-49330036 None:intergenic 45.0%
GAGGTTGGGATTGGAATATG+CGG + chr4_3:49330044-49330063 None:intergenic 45.0%
GTGGATCGTTGGATTTGGAA+TGG + chr4_3:49330073-49330092 None:intergenic 45.0%
TGAGTGTGGATCGTTGGATT+TGG + chr4_3:49330078-49330097 None:intergenic 45.0%
GAGATTTGAGTGTGGATCGT+TGG + chr4_3:49330084-49330103 None:intergenic 45.0%
ATGTGAGCGAGATTTGAGTG+TGG + chr4_3:49330092-49330111 None:intergenic 45.0%
ACTCCTCAACTTCACTCTCA+CGG - chr4_3:49330136-49330155 Msa0644970:three_prime_UTR 45.0%
! GTTGAAAGTGGAGGTGGATT+GGG + chr4_3:49330280-49330299 None:intergenic 45.0%
AGTTGAAAGTGGAGGTGGAT+TGG + chr4_3:49330281-49330300 None:intergenic 45.0%
! GGGTTTGAAGTTGAAAGTGG+AGG + chr4_3:49330289-49330308 None:intergenic 45.0%
! GAGGGGTTTGAAGTTGAAAG+TGG + chr4_3:49330292-49330311 None:intergenic 45.0%
!!! GTGTGGCGTTTTGAAATGAG+GGG + chr4_3:49330351-49330370 None:intergenic 45.0%
!!! GAGTGTGGCGTTTTGAAATG+AGG + chr4_3:49330353-49330372 None:intergenic 45.0%
! GGAAGCTGATGAGGCTTTAA+CGG + chr4_3:49330379-49330398 None:intergenic 45.0%
GTGAGGATTGATGCTATGAG+TGG + chr4_3:49330471-49330490 None:intergenic 45.0%
CTCATAGCATCAATCCTCAC+CGG - chr4_3:49330471-49330490 Msa0644970:CDS 45.0%
TCCTCACCGGATTAATACTC+TGG - chr4_3:49330484-49330503 Msa0644970:CDS 45.0%
! ACCAGAGTATTAATCCGGTG+AGG + chr4_3:49330488-49330507 None:intergenic 45.0%
CAACTACTCGCAATCTTCCT+CGG - chr4_3:49330546-49330565 Msa0644970:CDS 45.0%
ATCTTCCTCGGAACTATCGT+CGG - chr4_3:49330558-49330577 Msa0644970:CDS 45.0%
GCTGTGGCAATTCTAGGTTT+AGG - chr4_3:49330609-49330628 Msa0644970:CDS 45.0%
! TGCAACAAAGGGTAGGGTTT+TGG + chr4_3:49330649-49330668 None:intergenic 45.0%
CCGGAAAATGCTGCAACAAA+GGG + chr4_3:49330660-49330679 None:intergenic 45.0%
! CCCTTTGTTGCAGCATTTTC+CGG - chr4_3:49330657-49330676 Msa0644970:CDS 45.0%
ACCGGAAAATGCTGCAACAA+AGG + chr4_3:49330661-49330680 None:intergenic 45.0%
! GTTGCAGCATTTTCCGGTTT+TGG - chr4_3:49330663-49330682 Msa0644970:CDS 45.0%
GGTAGTTCTTCGTTAGGGTT+AGG - chr4_3:49330789-49330808 Msa0644970:intron 45.0%
!! TAGTGAAGCATTGTTAGCGC+CGG - chr4_3:49330827-49330846 Msa0644970:intron 45.0%
!! TAATGTTGGTGATGGGACTG+AGG - chr4_3:49330926-49330945 Msa0644970:intron 45.0%
CCAGACTTCGTGTATTTCGT+CGG - chr4_3:49330983-49331002 Msa0644970:intron 45.0%
AGCCATCGCAGTCAAAAACA+TGG + chr4_3:49331009-49331028 None:intergenic 45.0%
!! GGGTTTGGTTTCCTTGGTTT+TGG - chr4_3:49331115-49331134 Msa0644970:intron 45.0%
TAAGTTTGTGTTGGGGTGAG+TGG + chr4_3:49331502-49331521 None:intergenic 45.0%
GAGCATCCAATTTGCATTGC+TGG - chr4_3:49331629-49331648 Msa0644970:intron 45.0%
AACTTTGACGTTCCGAGTAG+CGG - chr4_3:49331914-49331933 Msa0644970:intron 45.0%
! CGTCACTCAATTTTACCAGG+TGG - chr4_3:49332063-49332082 Msa0644970:intron 45.0%
TCCAAGAATGGCAGCAGTTA+CGG + chr4_3:49332125-49332144 None:intergenic 45.0%
TTAGCTGTACTCCTCATCTC+AGG - chr4_3:49332145-49332164 Msa0644970:intron 45.0%
TAGCTGTACTCCTCATCTCA+GGG - chr4_3:49332146-49332165 Msa0644970:intron 45.0%
ATGTTACAACCCCTGAGATG+AGG + chr4_3:49332159-49332178 None:intergenic 45.0%
TCATCTCAGGGGTTGTAACA+TGG - chr4_3:49332158-49332177 Msa0644970:intron 45.0%
!! ATGGAAAGAGTGCTTAGCTG+AGG - chr4_3:49332177-49332196 Msa0644970:intron 45.0%
!! TGGAAAGAGTGCTTAGCTGA+GGG - chr4_3:49332178-49332197 Msa0644970:intron 45.0%
GCCGGGTACTTGAACAAATA+TGG - chr4_3:49332247-49332266 Msa0644970:intron 45.0%
TGCCTTTCATCTGTTCTCTG+GGG - chr4_3:49332396-49332415 Msa0644970:intron 45.0%
TACCCCAGAGAACAGATGAA+AGG + chr4_3:49332401-49332420 None:intergenic 45.0%
TGTTTGACCAAACCAACCAC+TGG - chr4_3:49332474-49332493 Msa0644970:CDS 45.0%
TCAAAACATGCTCCAGTGGT+TGG + chr4_3:49332489-49332508 None:intergenic 45.0%
GTGTTCTCTTGGAACACATC+AGG - chr4_3:49332605-49332624 Msa0644970:CDS 45.0%
TTGGAACACATCAGGCATCT+TGG - chr4_3:49332613-49332632 Msa0644970:CDS 45.0%
AAATCAAACCTCCCTTCCTC+TGG - chr4_3:49332703-49332722 Msa0644970:CDS 45.0%
GAACTCATGATGACCTTGAG+TGG + chr4_3:49332764-49332783 None:intergenic 45.0%
TCCCATTACTTCTTTGCCAG+TGG - chr4_3:49333031-49333050 Msa0644970:CDS 45.0%
CTCCACTGGCAAAGAAGTAA+TGG + chr4_3:49333036-49333055 None:intergenic 45.0%
TTTGTCTGTTGCTACTGCTC+TGG - chr4_3:49333087-49333106 Msa0644970:CDS 45.0%
TTGTCTGTTGCTACTGCTCT+GGG - chr4_3:49333088-49333107 Msa0644970:CDS 45.0%
GTCATTCCTCTCCAACCTTA+TGG - chr4_3:49333141-49333160 Msa0644970:CDS 45.0%
AATGAGTAAGGCCTCCCATA+AGG + chr4_3:49333159-49333178 None:intergenic 45.0%
ATGGGAGGCCTTACTCATTA+TGG - chr4_3:49333160-49333179 Msa0644970:CDS 45.0%
TGGGAGGCCTTACTCATTAT+GGG - chr4_3:49333161-49333180 Msa0644970:CDS 45.0%
GGCCTTACTCATTATGGGAT+TGG - chr4_3:49333166-49333185 Msa0644970:CDS 45.0%
! GGGTCAGCTCCAGTATTTTT+CGG - chr4_3:49333187-49333206 Msa0644970:CDS 45.0%
ATGTTCCACTTGCCAAATGG+TGG - chr4_3:49333218-49333237 Msa0644970:CDS 45.0%
TGTTCCACTTGCCAAATGGT+GGG - chr4_3:49333219-49333238 Msa0644970:CDS 45.0%
AAAGCCATAACCCCACCATT+TGG + chr4_3:49333233-49333252 None:intergenic 45.0%
!! ATTGTCATCTGGCTTGGACT+CGG - chr4_3:49333271-49333290 Msa0644970:CDS 45.0%
!! AAGCCATTGGCTTGTGGTAA+AGG - chr4_3:49333308-49333327 Msa0644970:CDS 45.0%
!! AGCCATTGGCTTGTGGTAAA+GGG - chr4_3:49333309-49333328 Msa0644970:CDS 45.0%
CTGTAACAGTTCCAGCTACA+GGG + chr4_3:49333688-49333707 None:intergenic 45.0%
TCTGTAACAGTTCCAGCTAC+AGG + chr4_3:49333689-49333708 None:intergenic 45.0%
!! ATTTATTTAATTGTAATAAT+AGG - chr4_3:49332825-49332844 Msa0644970:CDS 5.0%
CAAGTTGTCAAAGTCGAGCG+AGG - chr4_3:49329962-49329981 Msa0644970:three_prime_UTR 50.0%
!! TGCGGCTTTGTTTGTTGGTG+AGG + chr4_3:49330026-49330045 None:intergenic 50.0%
! GTTGGATTTGGAATGGACGG+TGG + chr4_3:49330066-49330085 None:intergenic 50.0%
AATCCCAATCACCACCACCA+TGG - chr4_3:49330164-49330183 Msa0644970:three_prime_UTR 50.0%
!! AAGCCATGGTGGTGGTGATT+GGG + chr4_3:49330170-49330189 None:intergenic 50.0%
GAATGTTGATGTTGGCGGAG+GGG + chr4_3:49330258-49330277 None:intergenic 50.0%
GGAATGTTGATGTTGGCGGA+GGG + chr4_3:49330259-49330278 None:intergenic 50.0%
! AGGCTTTAACGGTGAGAGTG+TGG + chr4_3:49330368-49330387 None:intergenic 50.0%
! TGGTGTGATGGAAGCTGATG+AGG + chr4_3:49330388-49330407 None:intergenic 50.0%
TGATTCCGACGATAGTTCCG+AGG + chr4_3:49330566-49330585 None:intergenic 50.0%
ATCACACAACCACTCCCACT+CGG - chr4_3:49330585-49330604 Msa0644970:CDS 50.0%
!! GGGTAGGGTTTTGGTGAGAA+CGG + chr4_3:49330640-49330659 None:intergenic 50.0%
CTGAGGAGAAGCTTGGATCT+TGG - chr4_3:49330943-49330962 Msa0644970:intron 50.0%
CCGACGAAATACACGAAGTC+TGG + chr4_3:49330986-49331005 None:intergenic 50.0%
!! GGCCATGTTTTTGACTGCGA+TGG - chr4_3:49331004-49331023 Msa0644970:intron 50.0%
! GATTGGTCAGACGATTGGGT+GGG - chr4_3:49331064-49331083 Msa0644970:intron 50.0%
GGACTAGATTTCAACGTCGG+AGG + chr4_3:49331167-49331186 None:intergenic 50.0%
!! TGATGCGCCTAAGCTTGCTA+GGG - chr4_3:49331187-49331206 Msa0644970:intron 50.0%
TCCAATTTGCATTGCTGGGC+TGG - chr4_3:49331634-49331653 Msa0644970:intron 50.0%
ACCAGCCCAGCAATGCAAAT+TGG + chr4_3:49331638-49331657 None:intergenic 50.0%
GGCAATATCAAGGATCGCGA+CGG + chr4_3:49331826-49331845 None:intergenic 50.0%
GCGGTCTCAATGCAGTCATA+GGG - chr4_3:49331883-49331902 Msa0644970:intron 50.0%
CGGTCTCAATGCAGTCATAG+GGG - chr4_3:49331884-49331903 Msa0644970:intron 50.0%
TGGGACTTTGGGTGTTTGGA+GGG - chr4_3:49332083-49332102 Msa0644970:intron 50.0%
AGCTGTACTCCTCATCTCAG+GGG - chr4_3:49332147-49332166 Msa0644970:intron 50.0%
!! AAACCACGTGAGAGTATCCC+AGG + chr4_3:49332209-49332228 None:intergenic 50.0%
! GTTTGCTGCCCTCATTGCAA+TGG - chr4_3:49332225-49332244 Msa0644970:intron 50.0%
! ACATGCTCCAGTGGTTGGTT+TGG + chr4_3:49332484-49332503 None:intergenic 50.0%
GCTTGTGCTGTGTGTTCTCT+TGG - chr4_3:49332594-49332613 Msa0644970:CDS 50.0%
!! TTGGTGGATTGGGTCTCTCA+TGG - chr4_3:49332969-49332988 Msa0644970:CDS 50.0%
ACCAATATGAGCAGCTCCAC+TGG + chr4_3:49333050-49333069 None:intergenic 50.0%
CTGGGAACTCCACCATTCTT+CGG - chr4_3:49333106-49333125 Msa0644970:CDS 50.0%
AACACCATGGCTCCGAAGAA+TGG + chr4_3:49333121-49333140 None:intergenic 50.0%
GGAGAGGAATGACAACACCA+TGG + chr4_3:49333134-49333153 None:intergenic 50.0%
TTCCTCTCCAACCTTATGGG+AGG - chr4_3:49333145-49333164 Msa0644970:CDS 50.0%
AGTAAGGCCTCCCATAAGGT+TGG + chr4_3:49333155-49333174 None:intergenic 50.0%
GTTCCACTTGCCAAATGGTG+GGG - chr4_3:49333220-49333239 Msa0644970:CDS 50.0%
TAACCCCACCATTTGGCAAG+TGG + chr4_3:49333226-49333245 None:intergenic 50.0%
! CTTGCCAAATGGTGGGGTTA+TGG - chr4_3:49333226-49333245 Msa0644970:CDS 50.0%
!! TTGTCATCTGGCTTGGACTC+GGG - chr4_3:49333272-49333291 Msa0644970:CDS 50.0%
TTGGACTCGGGTCTATTTGG+TGG - chr4_3:49333284-49333303 Msa0644970:CDS 50.0%
AGATACTGCATCCCTGTAGC+TGG - chr4_3:49333674-49333693 Msa0644970:five_prime_UTR 50.0%
! CATGCTCAGCCTTGCTACTT+GGG + chr4_3:49333716-49333735 None:intergenic 50.0%
! GTTGGTGAGGAATTGGTGGC+TGG + chr4_3:49330013-49330032 None:intergenic 55.0%
TGGAATGGACGGTGGAGGTT+GGG + chr4_3:49330058-49330077 None:intergenic 55.0%
TTGGAATGGACGGTGGAGGT+TGG + chr4_3:49330059-49330078 None:intergenic 55.0%
! GGATTTGGAATGGACGGTGG+AGG + chr4_3:49330063-49330082 None:intergenic 55.0%
GTGCCGTGAGAGTGAAGTTG+AGG + chr4_3:49330142-49330161 None:intergenic 55.0%
!! GAAGCCATGGTGGTGGTGAT+TGG + chr4_3:49330171-49330190 None:intergenic 55.0%
AGGAATGGAAGCCATGGTGG+TGG + chr4_3:49330178-49330197 None:intergenic 55.0%
GAGAGGAATGGAAGCCATGG+TGG + chr4_3:49330181-49330200 None:intergenic 55.0%
GGTGAGAGGAATGGAAGCCA+TGG + chr4_3:49330184-49330203 None:intergenic 55.0%
! GGTTGTGGTGGTGAGAGGAA+TGG + chr4_3:49330193-49330212 None:intergenic 55.0%
GAGGAAAGGGAGGTTTGTGG+CGG + chr4_3:49330217-49330236 None:intergenic 55.0%
GGGAATGTTGATGTTGGCGG+AGG + chr4_3:49330260-49330279 None:intergenic 55.0%
TGGAGACGAAGCTGGTGTGA+TGG + chr4_3:49330400-49330419 None:intergenic 55.0%
TGGTTCGTTCCAACCCCTGA+AGG - chr4_3:49330504-49330523 Msa0644970:CDS 55.0%
GAGTAGTTGCCATGCGTTGC+GGG + chr4_3:49330535-49330554 None:intergenic 55.0%
CGAGTAGTTGCCATGCGTTG+CGG + chr4_3:49330536-49330555 None:intergenic 55.0%
!! GATTCCATCGGTTTCGGCGA+GGG - chr4_3:49330851-49330870 Msa0644970:intron 55.0%
GATGGGACTGAGGAGAAGCT+TGG - chr4_3:49330936-49330955 Msa0644970:intron 55.0%
! CGATTGGTCAGACGATTGGG+TGG - chr4_3:49331063-49331082 Msa0644970:intron 55.0%
GGCTAAAGCGGCTATTGTGC+CGG - chr4_3:49331094-49331113 Msa0644970:intron 55.0%
GCTAAAGCGGCTATTGTGCC+GGG - chr4_3:49331095-49331114 Msa0644970:intron 55.0%
! TGTGCCGGGTTTGGTTTCCT+TGG - chr4_3:49331109-49331128 Msa0644970:intron 55.0%
CTAGCAAGCTTAGGCGCATC+AGG + chr4_3:49331188-49331207 None:intergenic 55.0%
! CTGATGCGCCTAAGCTTGCT+AGG - chr4_3:49331186-49331205 Msa0644970:intron 55.0%
TAGGCGGTGCATCCTCCTAT+TGG - chr4_3:49331761-49331780 Msa0644970:intron 55.0%
GGATGATGCGATCACGATCG+CGG - chr4_3:49331864-49331883 Msa0644970:intron 55.0%
CGCGGTCTCAATGCAGTCAT+AGG - chr4_3:49331882-49331901 Msa0644970:intron 55.0%
CAAACACCCAAAGTCCCACC+TGG + chr4_3:49332081-49332100 None:intergenic 55.0%
CAGGTGGGACTTTGGGTGTT+TGG - chr4_3:49332079-49332098 Msa0644970:intron 55.0%
GTGGGACTTTGGGTGTTTGG+AGG - chr4_3:49332082-49332101 Msa0644970:intron 55.0%
GCCGTAACTGCTGCCATTCT+TGG - chr4_3:49332121-49332140 Msa0644970:intron 55.0%
!! CTTAGCTGAGGGTGTTGCCT+GGG - chr4_3:49332189-49332208 Msa0644970:intron 55.0%
TTGCCTGGGATACTCTCACG+TGG - chr4_3:49332203-49332222 Msa0644970:intron 55.0%
GTACCCGGCCATTGCAATGA+GGG + chr4_3:49332236-49332255 None:intergenic 55.0%
AGTACCCGGCCATTGCAATG+AGG + chr4_3:49332237-49332256 None:intergenic 55.0%
GCCAGTGGAGCTGCTCATAT+TGG - chr4_3:49333046-49333065 Msa0644970:CDS 55.0%
TCCACCATTCTTCGGAGCCA+TGG - chr4_3:49333114-49333133 Msa0644970:CDS 55.0%
ACCATGGCTCCGAAGAATGG+TGG + chr4_3:49333118-49333137 None:intergenic 55.0%
GGCTTGGACTCGGGTCTATT+TGG - chr4_3:49333281-49333300 Msa0644970:CDS 55.0%
!! GGTGGAAAGCCATTGGCTTG+TGG - chr4_3:49333302-49333321 Msa0644970:CDS 55.0%
GGCCCTTTACCACAAGCCAA+TGG + chr4_3:49333314-49333333 None:intergenic 55.0%
GCATGCTCAGCCTTGCTACT+TGG + chr4_3:49333717-49333736 None:intergenic 55.0%
TGGACGGTGGAGGTTGGGAT+TGG + chr4_3:49330053-49330072 None:intergenic 60.0%
GTTTGTGGCGGTGGTTGTGG+TGG + chr4_3:49330205-49330224 None:intergenic 60.0%
GAGGTTTGTGGCGGTGGTTG+TGG + chr4_3:49330208-49330227 None:intergenic 60.0%
GAAAGGGAGGTTTGTGGCGG+TGG + chr4_3:49330214-49330233 None:intergenic 60.0%
GCGGAGGAAAGGGAGGTTTG+TGG + chr4_3:49330220-49330239 None:intergenic 60.0%
AGGAACGGAGGCGGAGGAAA+GGG + chr4_3:49330230-49330249 None:intergenic 60.0%
TTGATGTTGGCGGAGGGGTG+GGG + chr4_3:49330253-49330272 None:intergenic 60.0%
GTTGATGTTGGCGGAGGGGT+GGG + chr4_3:49330254-49330273 None:intergenic 60.0%
TGTTGATGTTGGCGGAGGGG+TGG + chr4_3:49330255-49330274 None:intergenic 60.0%
!! GCTGGTGATGGAGACGAAGC+TGG + chr4_3:49330408-49330427 None:intergenic 60.0%
TTAATGGCGGCGCCTTGCCA+TGG + chr4_3:49330447-49330466 None:intergenic 60.0%
GTTGCGGGATACGCCTTCAG+GGG + chr4_3:49330520-49330539 None:intergenic 60.0%
CGTTGCGGGATACGCCTTCA+GGG + chr4_3:49330521-49330540 None:intergenic 60.0%
AAGGCGTATCCCGCAACGCA+TGG - chr4_3:49330523-49330542 Msa0644970:CDS 60.0%
! GAATTGCCACAGCGCCGAGT+GGG + chr4_3:49330602-49330621 None:intergenic 60.0%
! AGAATTGCCACAGCGCCGAG+TGG + chr4_3:49330603-49330622 None:intergenic 60.0%
CTCGGCGCTGTGGCAATTCT+AGG - chr4_3:49330603-49330622 Msa0644970:CDS 60.0%
!! GTTAGCGCCGGCGATTCCAT+CGG - chr4_3:49330839-49330858 Msa0644970:intron 60.0%
!! GCCGGCGATTCCATCGGTTT+CGG - chr4_3:49330845-49330864 Msa0644970:intron 60.0%
GCCGAAACCGATGGAATCGC+CGG + chr4_3:49330849-49330868 None:intergenic 60.0%
!! CGATTCCATCGGTTTCGGCG+AGG - chr4_3:49330850-49330869 Msa0644970:intron 60.0%
TGGTCAGACGATTGGGTGGG+TGG - chr4_3:49331067-49331086 Msa0644970:intron 60.0%
AGACGATTGGGTGGGTGGAC+TGG - chr4_3:49331072-49331091 Msa0644970:intron 60.0%
! GACGATTGGGTGGGTGGACT+GGG - chr4_3:49331073-49331092 Msa0644970:intron 60.0%
!! GTGGGTGGACTGGGCTAAAG+CGG - chr4_3:49331082-49331101 Msa0644970:intron 60.0%
AGCGGCTATTGTGCCGGGTT+TGG - chr4_3:49331100-49331119 Msa0644970:intron 60.0%
!! GCTTAGCTGAGGGTGTTGCC+TGG - chr4_3:49332188-49332207 Msa0644970:intron 60.0%
GCTGCCCTCATTGCAATGGC+CGG - chr4_3:49332229-49332248 Msa0644970:intron 60.0%
CTGCCCTCATTGCAATGGCC+GGG - chr4_3:49332230-49332249 Msa0644970:intron 60.0%
GGCCTCCCATAAGGTTGGAG+AGG + chr4_3:49333150-49333169 None:intergenic 60.0%
! GCGGTGGTTGTGGTGGTGAG+AGG + chr4_3:49330198-49330217 None:intergenic 65.0%
AACGGAGGCGGAGGAAAGGG+AGG + chr4_3:49330227-49330246 None:intergenic 65.0%
GAGGAACGGAGGCGGAGGAA+AGG + chr4_3:49330231-49330250 None:intergenic 65.0%
TGCCATGGCTGAGCTGGTGG+CGG + chr4_3:49330432-49330451 None:intergenic 65.0%
CCTTGCCATGGCTGAGCTGG+TGG + chr4_3:49330435-49330454 None:intergenic 65.0%
CCACCAGCTCAGCCATGGCA+AGG - chr4_3:49330432-49330451 Msa0644970:CDS 65.0%
CGGGATACGCCTTCAGGGGT+TGG + chr4_3:49330516-49330535 None:intergenic 65.0%
GCGTTGCGGGATACGCCTTC+AGG + chr4_3:49330522-49330541 None:intergenic 65.0%
GTGTTGGGGTGAGTGGCACG+AGG + chr4_3:49331495-49331514 None:intergenic 65.0%
ATGTTGGCGGAGGGGTGGGG+AGG + chr4_3:49330250-49330269 None:intergenic 70.0%
!! GCTGGTGGCGGAGCTGGTGA+TGG + chr4_3:49330420-49330439 None:intergenic 70.0%
CTCCGCCACCAGCTCAGCCA+TGG - chr4_3:49330427-49330446 Msa0644970:CDS 70.0%
GCGCCTTGCCATGGCTGAGC+TGG + chr4_3:49330438-49330457 None:intergenic 70.0%
ACCACTCCCACTCGGCGCTG+TGG - chr4_3:49330593-49330612 Msa0644970:CDS 70.0%
CCAGCCCTCGCCGAAACCGA+TGG + chr4_3:49330858-49330877 None:intergenic 70.0%
!! CCATCGGTTTCGGCGAGGGC+TGG - chr4_3:49330855-49330874 Msa0644970:intron 70.0%
TCGGTTTCGGCGAGGGCTGG+TGG - chr4_3:49330858-49330877 Msa0644970:intron 70.0%
GTGGGGAGGAACGGAGGCGG+AGG + chr4_3:49330236-49330255 None:intergenic 75.0%
GGGGTGGGGAGGAACGGAGG+CGG + chr4_3:49330239-49330258 None:intergenic 75.0%
GGAGGGGTGGGGAGGAACGG+AGG + chr4_3:49330242-49330261 None:intergenic 75.0%
GGCGGAGGGGTGGGGAGGAA+CGG + chr4_3:49330245-49330264 None:intergenic 75.0%
!! GGCTGAGCTGGTGGCGGAGC+TGG + chr4_3:49330426-49330445 None:intergenic 75.0%
! GCCACAGCGCCGAGTGGGAG+TGG + chr4_3:49330597-49330616 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 49329909 49333779 49329909 ID=Msa0644970;Name=Msa0644970
chr4_3 mRNA 49329909 49333779 49329909 ID=Msa0644970-mRNA-1;Parent=Msa0644970;Name=Msa0644970-mRNA-1;_AED=0.01;_eAED=0.01;_QI=274|1|1|1|1|1|3|452|559
chr4_3 exon 49329909 49330723 49329909 ID=Msa0644970-mRNA-1:exon:11764;Parent=Msa0644970-mRNA-1
chr4_3 exon 49331385 49331606 49331385 ID=Msa0644970-mRNA-1:exon:11763;Parent=Msa0644970-mRNA-1
chr4_3 exon 49332411 49333779 49332411 ID=Msa0644970-mRNA-1:exon:11762;Parent=Msa0644970-mRNA-1
chr4_3 five_prime_UTR 49333506 49333779 49333506 ID=Msa0644970-mRNA-1:five_prime_utr;Parent=Msa0644970-mRNA-1
chr4_3 CDS 49332411 49333505 49332411 ID=Msa0644970-mRNA-1:cds;Parent=Msa0644970-mRNA-1
chr4_3 CDS 49331385 49331606 49331385 ID=Msa0644970-mRNA-1:cds;Parent=Msa0644970-mRNA-1
chr4_3 CDS 49330361 49330723 49330361 ID=Msa0644970-mRNA-1:cds;Parent=Msa0644970-mRNA-1
chr4_3 three_prime_UTR 49329909 49330360 49329909 ID=Msa0644970-mRNA-1:three_prime_utr;Parent=Msa0644970-mRNA-1
Gene Sequence

>Msa0644970

ATGGCTTCCATTCCTCTCACCACCACAACCACCGCCACAAACCTCCCTTTCCTCCGCCTCCGTTCCTCCCCACCCCTCCGCCAACATCAACATTCCCAATCCACCTCCACTTTCAACTTCAAACCCCTCAAATCAATTCACACATCTCCCATTTCCATTTTCAAACCCCTCATTTCAAAACGCCACACTCTCACCGTTAAAGCCTCATCAGCTTCCATCACACCAGCTTCGTCTCCATCACCAGCTCCGCCACCAGCTCAGCCATGGCAAGGCGCCGCCATTAAACCACTCATAGCATCAATCCTCACCGGATTAATACTCTGGTTCGTTCCAACCCCTGAAGGCGTATCCCGCAACGCATGGCAACTACTCGCAATCTTCCTCGGAACTATCGTCGGAATCATCACACAACCACTCCCACTCGGCGCTGTGGCAATTCTAGGTTTAGGAGTTTCCGTTCTCACCAAAACCCTACCCTTTGTTGCAGCATTTTCCGGTTTTGGTGATCCAATTCCATGGTTGATTTGTTTAGCTTTTTTCTTTGCTAAAGGTTTTATCAAAACTGGATTAGGTAACCGTGTTGCGTATCAATTTGTGAAGCTTTTTGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTTAGTGAAGCATTGTTAGCGCCGGCGATTCCATCGGTTTCGGCGAGGGCTGGTGGAATTTTTTTACCTTTGGTTAAGTCTCTTTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGGACTGAGGAGAAGCTTGGATCTTGGTTGATGCTTACTTGTTTCCAGACTTCGTGTATTTCGTCGGCCATGTTTTTGACTGCGATGGCTGCGAATCCGTTATGTGCCACTCTTACTTTGAATTCGATTGGTCAGACGATTGGGTGGGTGGACTGGGCTAAAGCGGCTATTGTGCCGGGTTTGGTTTCCTTGGTTTTGGTACCGTTGATTTTGTATATTATTTATCCTCCGACGTTGAAATCTAGTCCTGATGCGCCTAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGGCCTATGACGACTAATGAGAAAATTATGACTGCTACTCTGTTTCTTACGGTGGGACTTTGGGTGTTTGGAGGGCTTCTTAATATAGATGCCGTAACTGCTGCCATTCTTGGATTAGCTGTACTCCTCATCTCAGGGGTTGTAACATGGAAAGAGTGCTTAGCTGAGGGTGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCCGGGTACTTGAACAAATATGGTCTCATCTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTCGGTATTCTGGTTCTCCTCTACTTCTACTCCCATTACTTCTTTGCCAGTGGAGCTGCTCATATTGGTGCTATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGAACTCCACCATTCTTCGGAGCCATGGTGTTGTCATTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTATTTTTCGGTGCCAACTATGTTCCACTTGCCAAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTTAACATTGTCATCTGGCTTGGACTCGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA
Protein sequence

>Msa0644970

MASIPLTTTTTATNLPFLRLRSSPPLRQHQHSQSTSTFNFKPLKSIHTSPISIFKPLISKRHTLTVKASSASITPASSPSPAPPPAQPWQGAAIKPLIASILTGLILWFVPTPEGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEEKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSIGQTIGWVDWAKAAIVPGLVSLVLVPLILYIIYPPTLKSSPDAPKLAREKLEKMGPMTTNEKIMTATLFLTVGLWVFGGLLNIDAVTAAILGLAVLLISGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIVIWLGLGSIWWKAIGLW*