AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0256770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256770 MtrunA17_Chr2g0318521 99.248 266 0 1 1 266 1 264 0.0 533
Msa0256770 MtrunA17_Chr5g0447531 69.288 267 69 6 10 266 2 265 6.36e-126 358
Msa0256770 MtrunA17_Chr4g0051941 69.434 265 76 4 1 265 6 265 6.54e-122 348
Msa0256770 MtrunA17_Chr6g0453181 78.440 218 45 2 48 265 49 264 5.43e-120 343
Msa0256770 MtrunA17_Chr6g0453151 77.523 218 47 2 48 265 116 331 1.65e-119 345
Msa0256770 MtrunA17_Chr6g0453141 77.523 218 47 2 48 265 49 264 7.58e-119 340
Msa0256770 MtrunA17_Chr6g0453161 78.899 218 44 2 48 265 316 531 1.09e-116 344
Msa0256770 MtrunA17_Chr6g0453161 77.523 218 47 2 48 265 51 266 3.21e-115 341
Msa0256770 MtrunA17_Chr6g0464511 63.596 228 47 2 38 265 20 211 2.00e-91 269
Msa0256770 MtrunA17_Chr6g0476641 48.361 244 110 6 16 254 42 274 1.89e-58 187
Msa0256770 MtrunA17_Chr1g0157481 40.230 261 141 4 9 254 62 322 8.28e-58 187
Msa0256770 MtrunA17_Chr6g0453171 72.727 99 26 1 168 266 1 98 3.03e-41 137
Msa0256770 MtrunA17_Chr5g0448421 41.014 217 95 8 61 254 63 269 6.42e-37 132
Msa0256770 MtrunA17_Chr5g0448411 41.014 217 95 9 61 254 61 267 4.50e-36 129
Msa0256770 MtrunA17_Chr8g0345631 34.274 248 124 10 19 250 32 256 3.87e-33 121
Msa0256770 MtrunA17_Chr3g0133901 37.624 202 94 5 65 250 68 253 4.91e-32 119
Msa0256770 MtrunA17_Chr6g0462031 37.557 221 109 9 37 254 39 233 1.04e-30 114
Msa0256770 MtrunA17_Chr2g0301081 35.909 220 97 7 51 250 60 255 1.57e-30 114
Msa0256770 MtrunA17_Chr4g0006181 35.622 233 92 7 62 251 119 336 7.75e-29 112
Msa0256770 MtrunA17_Chr3g0092091 37.255 204 92 7 64 253 62 243 1.66e-27 106
Msa0256770 MtrunA17_Chr3g0113311 41.611 149 72 5 92 240 137 270 4.53e-22 92.4
Msa0256770 MtrunA17_Chr2g0279001 34.615 208 86 7 65 243 73 259 4.76e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0256770 AT5G54270.1 87.925 265 30 2 4 266 1 265 2.00e-174 481
Msa0256770 AT2G05070.1 68.421 266 71 6 10 265 2 264 5.94e-124 353
Msa0256770 AT2G05100.1 68.914 267 70 6 10 266 2 265 8.33e-124 353
Msa0256770 AT3G27690.1 68.302 265 79 5 2 265 5 265 2.15e-122 350
Msa0256770 AT3G27690.2 68.302 265 79 5 2 265 37 297 2.57e-122 351
Msa0256770 AT1G29930.1 70.539 241 58 4 36 265 28 266 1.07e-117 338
Msa0256770 AT1G29920.1 70.539 241 58 4 36 265 28 266 1.24e-117 338
Msa0256770 AT1G29910.1 70.539 241 58 4 36 265 28 266 1.24e-117 338
Msa0256770 AT2G34420.1 66.543 269 73 6 8 265 2 264 1.35e-117 338
Msa0256770 AT2G34430.1 71.967 239 55 4 37 265 29 265 1.97e-117 337
Msa0256770 AT2G05100.2 62.030 266 84 7 10 261 2 264 4.37e-103 303
Msa0256770 AT1G76570.1 46.977 215 106 2 48 254 106 320 3.56e-59 191
Msa0256770 AT4G10340.1 49.524 210 97 4 48 254 62 265 4.38e-53 174
Msa0256770 AT1G61520.3 42.857 217 91 9 61 254 59 265 2.66e-39 138
Msa0256770 AT1G61520.1 42.857 217 91 9 61 254 59 265 2.66e-39 138
Msa0256770 AT1G61520.2 42.029 207 87 9 71 254 14 210 5.75e-35 125
Msa0256770 AT3G61470.1 38.140 215 99 10 51 250 50 245 4.29e-34 124
Msa0256770 AT1G45474.2 40.206 194 101 4 65 250 56 242 3.83e-33 121
Msa0256770 AT1G45474.1 40.206 194 101 4 65 250 56 242 3.83e-33 121
Msa0256770 AT3G08940.2 35.622 233 92 7 62 251 59 276 7.09e-31 116
Msa0256770 AT3G54890.1 40.206 194 96 8 65 254 55 232 1.60e-30 114
Msa0256770 AT1G19150.1 35.111 225 100 8 51 254 63 262 2.64e-28 109
Msa0256770 AT3G47470.1 37.255 204 92 6 64 253 63 244 2.04e-27 106
Msa0256770 AT5G01530.1 34.322 236 97 7 62 254 62 282 2.10e-27 107
Msa0256770 AT1G15820.1 35.096 208 85 7 65 243 70 256 3.66e-21 90.1
Msa0256770 AT2G40100.1 41.447 152 73 5 92 243 136 271 7.61e-21 89.7
Msa0256770 AT3G54890.4 37.975 158 79 7 65 219 55 196 1.57e-19 84.7
Msa0256770 AT5G28450.1 48.718 78 36 2 174 250 87 161 1.52e-14 70.1

Find 98 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGTGGTCTTGACTATTT+AGG 0.130970 2_2:-51819179 Msa0256770:CDS
ATTATGTTCTTAATGATTAT+TGG 0.166698 2_2:-51818732 Msa0256770:three_prime_UTR
CTGTTCTTGGCAAATGCTTC+TGG 0.168930 2_2:+51819509 None:intergenic
GGCATAAACCCAAGCATTAT+TGG 0.243210 2_2:+51818842 None:intergenic
AGGACCTTTGGAGAATCTTT+TGG 0.271440 2_2:-51818886 Msa0256770:CDS
GGAGAATTCCCTGGTGATTA+TGG 0.284769 2_2:-51819560 Msa0256770:CDS
ACCAGACAGAGTGAAATATT+TGG 0.297922 2_2:-51819618 Msa0256770:CDS
AGGTTTCCAAGTTGTTCTAA+TGG 0.320920 2_2:-51819114 Msa0256770:CDS
AACCTCAAGAGCCCTGTTCT+TGG 0.335763 2_2:+51819496 None:intergenic
TTTCGCATCAACGGTCTTCC+TGG 0.341593 2_2:-51819077 Msa0256770:CDS
AAGGTGGTCTTGACTATTTA+GGG 0.341687 2_2:-51819178 Msa0256770:CDS
TTAAGCTCAGCGAAAGTAAC+TGG 0.345168 2_2:+51818987 None:intergenic
CTTTGTGCATGAACAAGGTT+TGG 0.349100 2_2:+51819152 None:intergenic
GGTTTCCAAGTTGTTCTAAT+GGG 0.357946 2_2:-51819113 Msa0256770:CDS
ACCCAAGCATTATTGGCAAC+AGG 0.364495 2_2:+51818849 None:intergenic
CCCAAATATTTCACTCTGTC+TGG 0.371437 2_2:+51819617 None:intergenic
CAGAAGCATTTGCCAAGAAC+AGG 0.372548 2_2:-51819508 Msa0256770:CDS
CCCTGTTGCCAATAATGCTT+GGG 0.379245 2_2:-51818850 Msa0256770:CDS
TAACATTGATGTTTAAGAAC+CGG 0.384102 2_2:+51818806 None:intergenic
CAGACTCCTTCATACTTAAC+TGG 0.384985 2_2:-51819581 Msa0256770:CDS
TTGACTTCAAAGAACCAGTT+TGG 0.402631 2_2:-51819229 Msa0256770:CDS
GGCCAATACTTTGACCCTCT+TGG 0.405341 2_2:-51819023 Msa0256770:CDS
TGTCACAGGTAAAGGACCTT+TGG 0.407975 2_2:-51818898 Msa0256770:CDS
CAAAGCATCTTAGCAGTACT+AGG 0.430115 2_2:-51819134 Msa0256770:CDS
CCAGACAGAGTGAAATATTT+GGG 0.431224 2_2:-51819617 Msa0256770:CDS
CAAGCTATTGTCACAGGTAA+AGG 0.435174 2_2:-51818906 Msa0256770:CDS
GGAAATCAAGAATGGAAGAT+TGG 0.436306 2_2:-51818958 Msa0256770:CDS
GATCCTGCTTTGAACCAAAC+TGG 0.441392 2_2:+51819215 None:intergenic
GTTAAACAAACTCCTTTCCT+TGG 0.446741 2_2:-51820259 Msa0256770:CDS
TCAGTTATTTGAGTGAACTA+AGG 0.455227 2_2:-51820367 Msa0256770:five_prime_UTR
ACCCTGTTGCCAATAATGCT+TGG 0.459427 2_2:-51818851 Msa0256770:CDS
GAAGGAGTCTGAGCTGAAAA+TGG 0.471279 2_2:+51819593 None:intergenic
AAAAGAAGCAGTTGAAAACT+TGG 0.479704 2_2:-51820331 Msa0256770:five_prime_UTR
GTTCTAATGGGTCTTGTGGA+AGG 0.479796 2_2:-51819101 Msa0256770:CDS
TGAAGGTGATCCATGGAAGA+TGG 0.483930 2_2:-51819310 Msa0256770:intron
TTAAGAACCGGGCACAAACT+TGG 0.487396 2_2:+51818818 None:intergenic
GGGTCAAAGTATTGGCCACC+AGG 0.488607 2_2:+51819029 None:intergenic
GACCAAGAGGGTCAAAGTAT+TGG 0.490473 2_2:+51819021 None:intergenic
CAGCTCCCTTCCTTTGACCA+AGG 0.496545 2_2:+51820242 None:intergenic
TCCTTTCCTTGGTCAAAGGA+AGG 0.497166 2_2:-51820248 Msa0256770:CDS
TTTGTTCAAGCTATTGTCAC+AGG 0.499887 2_2:-51818912 Msa0256770:CDS
TTTGTGCATGAACAAGGTTT+GGG 0.509110 2_2:+51819153 None:intergenic
CAAGACCCATTAGAACAACT+TGG 0.511234 2_2:+51819108 None:intergenic
AAACTCCTTTCCTTGGTCAA+AGG 0.511273 2_2:-51820252 Msa0256770:CDS
TGCCAAGAACAGGGCTCTTG+AGG 0.515098 2_2:-51819498 Msa0256770:intron
TTTCGCTGAGCTTAAAGTGA+AGG 0.516818 2_2:-51818979 Msa0256770:CDS
CTAGCATAGCCCATCTTCCA+TGG 0.521302 2_2:+51819300 None:intergenic
AGTATTGGCCACCAGGGTAG+AGG 0.522346 2_2:+51819036 None:intergenic
TATCTATGATTGCCTTTGTG+TGG 0.526299 2_2:-51818785 Msa0256770:three_prime_UTR
AATTCCCTGGTGATTATGGA+TGG 0.526464 2_2:-51819556 Msa0256770:CDS
GAACCAGTTTGGTTCAAAGC+AGG 0.531298 2_2:-51819218 Msa0256770:CDS
CTTAGAGATGTTGTCGCCAT+GGG 0.532010 2_2:-51820211 Msa0256770:CDS
TACTTAACTGGAGAATTCCC+TGG 0.533200 2_2:-51819569 Msa0256770:CDS
TTGTTGCCCTCTCCGACACC+AGG 0.533846 2_2:+51819059 None:intergenic
TGGGCTATGCTAGGAGCACT+AGG 0.534359 2_2:-51819290 Msa0256770:CDS
ATGGCGACAACATCTCTAAG+AGG 0.535432 2_2:+51820214 None:intergenic
AGTTGTTCTAATGGGTCTTG+TGG 0.535822 2_2:-51819105 Msa0256770:CDS
TATGCCACCAAGTTTGTGCC+CGG 0.541283 2_2:-51818825 Msa0256770:CDS
GTGGAAGGCTTTCGCATCAA+CGG 0.541464 2_2:-51819086 Msa0256770:CDS
CCCAAGCATTATTGGCAACA+GGG 0.543641 2_2:+51818850 None:intergenic
AAAGTGAAGGAAATCAAGAA+TGG 0.545234 2_2:-51818966 Msa0256770:CDS
GGTCTTCCTGGTGTCGGAGA+GGG 0.548663 2_2:-51819065 Msa0256770:CDS
AGATGCTTTGTGCATGAACA+AGG 0.550454 2_2:+51819147 None:intergenic
AACATTGATGTTTAAGAACC+GGG 0.550538 2_2:+51818807 None:intergenic
TCTTAGAGATGTTGTCGCCA+TGG 0.551003 2_2:-51820212 Msa0256770:CDS
CATGGAAGATGGGCTATGCT+AGG 0.554415 2_2:-51819299 Msa0256770:CDS
GAAGGTGATCCATGGAAGAT+GGG 0.555306 2_2:-51819309 Msa0256770:intron
AATTCTCCAGTTAAGTATGA+AGG 0.558241 2_2:+51819575 None:intergenic
CCTTTCCTTGGTCAAAGGAA+GGG 0.559689 2_2:-51820247 Msa0256770:CDS
GATTATGGATGGGATACTGC+TGG 0.560987 2_2:-51819545 Msa0256770:CDS
AAGGGAAATGAATTGTGGTA+TGG 0.568995 2_2:-51819641 Msa0256770:CDS
GACAACATCTCTAAGAGGGT+TGG 0.572370 2_2:+51820219 None:intergenic
CGGTCTTCCTGGTGTCGGAG+AGG 0.575168 2_2:-51819066 Msa0256770:CDS
CCCTTCCTTTGACCAAGGAA+AGG 0.576349 2_2:+51820247 None:intergenic
ATCAACGGTCTTCCTGGTGT+CGG 0.580505 2_2:-51819071 Msa0256770:CDS
GTATCCCATCCATAATCACC+AGG 0.582530 2_2:+51819551 None:intergenic
GGTGAATCTTGAGGTTCCCA+TGG 0.597497 2_2:+51820195 None:intergenic
AAATACCATGGTGAATCTTG+AGG 0.601532 2_2:+51820186 None:intergenic
TGTAGCAGCCATCAATGCCA+TGG 0.603074 2_2:+51820300 None:intergenic
ATTCCCTGGTGATTATGGAT+GGG 0.608330 2_2:-51819555 Msa0256770:CDS
TTGTAAAGGGAAATGAATTG+TGG 0.611139 2_2:-51819646 Msa0256770:intron
GGATCACAAATCTTCTCAGA+AGG 0.611974 2_2:-51819197 Msa0256770:CDS
AGAACCGGGCACAAACTTGG+TGG 0.615159 2_2:+51818821 None:intergenic
TCACAAATCTTCTCAGAAGG+TGG 0.617687 2_2:-51819194 Msa0256770:CDS
AGAAGCATTTGCCAAGAACA+GGG 0.625251 2_2:-51819507 Msa0256770:CDS
TGGCGACAACATCTCTAAGA+GGG 0.635101 2_2:+51820215 None:intergenic
TGACTACTGAAGGTGATCCA+TGG 0.645681 2_2:-51819317 Msa0256770:intron
GGTCAAAGTATTGGCCACCA+GGG 0.653321 2_2:+51819030 None:intergenic
TGATCCAAAAGATTCTCCAA+AGG 0.654984 2_2:+51818882 None:intergenic
GAGGGCAACAACCTCTACCC+TGG 0.655561 2_2:-51819047 Msa0256770:CDS
GGATCGTCAGCTAGACCAAG+AGG 0.670549 2_2:+51819008 None:intergenic
TCTAATCATCATCCACACAA+AGG 0.671776 2_2:+51818773 None:intergenic
GATCGTCAGCTAGACCAAGA+GGG 0.686043 2_2:+51819009 None:intergenic
GGCAACAACCTCTACCCTGG+TGG 0.691909 2_2:-51819044 Msa0256770:CDS
TAACTGATAGTAGAAATGTG+TGG 0.705297 2_2:+51820383 None:intergenic
GTGTGGATGATGATTAGACA+TGG 0.714627 2_2:-51818768 Msa0256770:three_prime_UTR
GGGAACCTCAAGATTCACCA+TGG 0.716738 2_2:-51820191 Msa0256770:intron
TATCCCATCCATAATCACCA+GGG 0.728458 2_2:+51819552 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTTTTTACTAAAAAAAT+AGG + chr2_2:51818893-51818912 None:intergenic 10.0%
!!! AAAAGTATGTTTTTTATTAT+TGG - chr2_2:51819025-51819044 Msa0256770:CDS 10.0%
!!! GAATTTTTTACTAAAAAAAT+AGG + chr2_2:51818893-51818912 None:intergenic 10.0%
!!! AAAAGTATGTTTTTTATTAT+TGG - chr2_2:51819025-51819044 Msa0256770:CDS 10.0%
!!! CTAACAAAATAAATGTTTTA+TGG + chr2_2:51819160-51819179 None:intergenic 15.0%
!!! ACAATTTCAAAAACAAATTT+TGG + chr2_2:51819680-51819699 None:intergenic 15.0%
!!! ATAATTTTGTATCATTATTG+AGG + chr2_2:51819705-51819724 None:intergenic 15.0%
!! ATTATGTTCTTAATGATTAT+TGG - chr2_2:51820312-51820331 Msa0256770:exon 15.0%
!!! CTAACAAAATAAATGTTTTA+TGG + chr2_2:51819160-51819179 None:intergenic 15.0%
!!! ACAATTTCAAAAACAAATTT+TGG + chr2_2:51819680-51819699 None:intergenic 15.0%
!!! ATAATTTTGTATCATTATTG+AGG + chr2_2:51819705-51819724 None:intergenic 15.0%
!! ATTATGTTCTTAATGATTAT+TGG - chr2_2:51820312-51820331 Msa0256770:exon 15.0%
!!! ATAAAAAACATACTTTTGCA+TGG + chr2_2:51819022-51819041 None:intergenic 20.0%
!!! TTTAATAGTCATTTTACTCA+CGG + chr2_2:51819253-51819272 None:intergenic 20.0%
!!! ACTAATGTTCATTTTAAAGA+TGG - chr2_2:51820364-51820383 Msa0256770:five_prime_UTR 20.0%
!!! ATAAAAAACATACTTTTGCA+TGG + chr2_2:51819022-51819041 None:intergenic 20.0%
!!! TTTAATAGTCATTTTACTCA+CGG + chr2_2:51819253-51819272 None:intergenic 20.0%
!!! ACTAATGTTCATTTTAAAGA+TGG - chr2_2:51820364-51820383 Msa0256770:five_prime_UTR 20.0%
! ACTAAAAAAATAGGGAAAAG+AGG + chr2_2:51818884-51818903 None:intergenic 25.0%
! CACTATGCTAACATATTTAT+AGG - chr2_2:51818912-51818931 Msa0256770:CDS 25.0%
! TACTCGTATTTATATAGTGT+TGG - chr2_2:51819343-51819362 Msa0256770:intron 25.0%
!!! TTTATATAGTGTTGGTTATG+TGG - chr2_2:51819351-51819370 Msa0256770:intron 25.0%
! ATTGTGTTTGTGATTGTAAA+GGG - chr2_2:51819385-51819404 Msa0256770:intron 25.0%
!! TTAACATGTTAACAAGCTTT+TGG + chr2_2:51819649-51819668 None:intergenic 25.0%
!!! AAGCTTGTTAACATGTTAAA+TGG - chr2_2:51819650-51819669 Msa0256770:intron 25.0%
!! AAAATTATGTTGACTACTGA+AGG - chr2_2:51819717-51819736 Msa0256770:intron 25.0%
! TAACATTGATGTTTAAGAAC+CGG + chr2_2:51820241-51820260 None:intergenic 25.0%
!!! TGGATTAGTATATCTGTTTT+TGG - chr2_2:51820332-51820351 Msa0256770:five_prime_UTR 25.0%
!!! ATATCTGTTTTTGGTTCTTA+AGG - chr2_2:51820341-51820360 Msa0256770:five_prime_UTR 25.0%
! ACTAAAAAAATAGGGAAAAG+AGG + chr2_2:51818884-51818903 None:intergenic 25.0%
! CACTATGCTAACATATTTAT+AGG - chr2_2:51818912-51818931 Msa0256770:CDS 25.0%
! TACTCGTATTTATATAGTGT+TGG - chr2_2:51819343-51819362 Msa0256770:intron 25.0%
!!! TTTATATAGTGTTGGTTATG+TGG - chr2_2:51819351-51819370 Msa0256770:intron 25.0%
! ATTGTGTTTGTGATTGTAAA+GGG - chr2_2:51819385-51819404 Msa0256770:intron 25.0%
!! TTAACATGTTAACAAGCTTT+TGG + chr2_2:51819649-51819668 None:intergenic 25.0%
!!! AAGCTTGTTAACATGTTAAA+TGG - chr2_2:51819650-51819669 Msa0256770:intron 25.0%
!! AAAATTATGTTGACTACTGA+AGG - chr2_2:51819717-51819736 Msa0256770:intron 25.0%
! TAACATTGATGTTTAAGAAC+CGG + chr2_2:51820241-51820260 None:intergenic 25.0%
!!! TGGATTAGTATATCTGTTTT+TGG - chr2_2:51820332-51820351 Msa0256770:five_prime_UTR 25.0%
!!! ATATCTGTTTTTGGTTCTTA+AGG - chr2_2:51820341-51820360 Msa0256770:five_prime_UTR 25.0%
TCAGTTATTTGAGTGAACTA+AGG - chr2_2:51818677-51818696 Msa0256770:three_prime_UTR 30.0%
AAAAGAAGCAGTTGAAAACT+TGG - chr2_2:51818713-51818732 Msa0256770:three_prime_UTR 30.0%
AAAACTTGGAACAAAAACCA+TGG - chr2_2:51818727-51818746 Msa0256770:three_prime_UTR 30.0%
AGATACAATATTAGTCACAC+AGG + chr2_2:51818952-51818971 None:intergenic 30.0%
!!! CATAAGTTGGTTTTTACGAT+TGG + chr2_2:51819102-51819121 None:intergenic 30.0%
ATCTTACATCATGCATAAGT+TGG + chr2_2:51819115-51819134 None:intergenic 30.0%
CATTGTGTTTGTGATTGTAA+AGG - chr2_2:51819384-51819403 Msa0256770:intron 30.0%
TTGTAAAGGGAAATGAATTG+TGG - chr2_2:51819398-51819417 Msa0256770:intron 30.0%
AATTCTCCAGTTAAGTATGA+AGG + chr2_2:51819472-51819491 None:intergenic 30.0%
TTAAATAAGCCCCAATACAA+TGG - chr2_2:51819582-51819601 Msa0256770:CDS 30.0%
TGAGAAAGAACCATTGTATT+GGG + chr2_2:51819595-51819614 None:intergenic 30.0%
ATGAGAAAGAACCATTGTAT+TGG + chr2_2:51819596-51819615 None:intergenic 30.0%
!! ACCAGAAGTACTTGAAAAAT+GGG - chr2_2:51819786-51819805 Msa0256770:intron 30.0%
AAAGTGAAGGAAATCAAGAA+TGG - chr2_2:51820078-51820097 Msa0256770:intron 30.0%
AACATTGATGTTTAAGAACC+GGG + chr2_2:51820240-51820259 None:intergenic 30.0%
TCAGTTATTTGAGTGAACTA+AGG - chr2_2:51818677-51818696 Msa0256770:three_prime_UTR 30.0%
AAAAGAAGCAGTTGAAAACT+TGG - chr2_2:51818713-51818732 Msa0256770:three_prime_UTR 30.0%
AAAACTTGGAACAAAAACCA+TGG - chr2_2:51818727-51818746 Msa0256770:three_prime_UTR 30.0%
AGATACAATATTAGTCACAC+AGG + chr2_2:51818952-51818971 None:intergenic 30.0%
!!! CATAAGTTGGTTTTTACGAT+TGG + chr2_2:51819102-51819121 None:intergenic 30.0%
ATCTTACATCATGCATAAGT+TGG + chr2_2:51819115-51819134 None:intergenic 30.0%
CATTGTGTTTGTGATTGTAA+AGG - chr2_2:51819384-51819403 Msa0256770:intron 30.0%
TTGTAAAGGGAAATGAATTG+TGG - chr2_2:51819398-51819417 Msa0256770:intron 30.0%
AATTCTCCAGTTAAGTATGA+AGG + chr2_2:51819472-51819491 None:intergenic 30.0%
TTAAATAAGCCCCAATACAA+TGG - chr2_2:51819582-51819601 Msa0256770:CDS 30.0%
TGAGAAAGAACCATTGTATT+GGG + chr2_2:51819595-51819614 None:intergenic 30.0%
ATGAGAAAGAACCATTGTAT+TGG + chr2_2:51819596-51819615 None:intergenic 30.0%
!! ACCAGAAGTACTTGAAAAAT+GGG - chr2_2:51819786-51819805 Msa0256770:intron 30.0%
AAAGTGAAGGAAATCAAGAA+TGG - chr2_2:51820078-51820097 Msa0256770:intron 30.0%
AACATTGATGTTTAAGAACC+GGG + chr2_2:51820240-51820259 None:intergenic 30.0%
! AACAAAAACCATGGCATTGA+TGG - chr2_2:51818736-51818755 Msa0256770:three_prime_UTR 35.0%
GTTAAACAAACTCCTTTCCT+TGG - chr2_2:51818785-51818804 Msa0256770:three_prime_UTR 35.0%
AAATACCATGGTGAATCTTG+AGG + chr2_2:51818861-51818880 None:intergenic 35.0%
! ATGTTTTATGGCCAACTCTA+TGG + chr2_2:51819148-51819167 None:intergenic 35.0%
AAGGGAAATGAATTGTGGTA+TGG - chr2_2:51819403-51819422 Msa0256770:intron 35.0%
ACCAGACAGAGTGAAATATT+TGG - chr2_2:51819426-51819445 Msa0256770:intron 35.0%
CCAGACAGAGTGAAATATTT+GGG - chr2_2:51819427-51819446 Msa0256770:intron 35.0%
GAGAAAGAACCATTGTATTG+GGG + chr2_2:51819594-51819613 None:intergenic 35.0%
!! CACCAGAAGTACTTGAAAAA+TGG - chr2_2:51819785-51819804 Msa0256770:intron 35.0%
!!! ACCCATTTTTCAAGTACTTC+TGG + chr2_2:51819790-51819809 None:intergenic 35.0%
TTGACTTCAAAGAACCAGTT+TGG - chr2_2:51819815-51819834 Msa0256770:intron 35.0%
! AAGGTGGTCTTGACTATTTA+GGG - chr2_2:51819866-51819885 Msa0256770:intron 35.0%
TTTGTGCATGAACAAGGTTT+GGG + chr2_2:51819894-51819913 None:intergenic 35.0%
AGGTTTCCAAGTTGTTCTAA+TGG - chr2_2:51819930-51819949 Msa0256770:intron 35.0%
GGTTTCCAAGTTGTTCTAAT+GGG - chr2_2:51819931-51819950 Msa0256770:intron 35.0%
GGAAATCAAGAATGGAAGAT+TGG - chr2_2:51820086-51820105 Msa0256770:intron 35.0%
! TTGGCTATGTTTTCGATGTT+TGG - chr2_2:51820105-51820124 Msa0256770:intron 35.0%
TTTGTTCAAGCTATTGTCAC+AGG - chr2_2:51820132-51820151 Msa0256770:intron 35.0%
TGATCCAAAAGATTCTCCAA+AGG + chr2_2:51820165-51820184 None:intergenic 35.0%
TATCTATGATTGCCTTTGTG+TGG - chr2_2:51820259-51820278 Msa0256770:CDS 35.0%
TCTAATCATCATCCACACAA+AGG + chr2_2:51820274-51820293 None:intergenic 35.0%
! AACAAAAACCATGGCATTGA+TGG - chr2_2:51818736-51818755 Msa0256770:three_prime_UTR 35.0%
GTTAAACAAACTCCTTTCCT+TGG - chr2_2:51818785-51818804 Msa0256770:three_prime_UTR 35.0%
AAATACCATGGTGAATCTTG+AGG + chr2_2:51818861-51818880 None:intergenic 35.0%
! ATGTTTTATGGCCAACTCTA+TGG + chr2_2:51819148-51819167 None:intergenic 35.0%
AAGGGAAATGAATTGTGGTA+TGG - chr2_2:51819403-51819422 Msa0256770:intron 35.0%
ACCAGACAGAGTGAAATATT+TGG - chr2_2:51819426-51819445 Msa0256770:intron 35.0%
CCAGACAGAGTGAAATATTT+GGG - chr2_2:51819427-51819446 Msa0256770:intron 35.0%
GAGAAAGAACCATTGTATTG+GGG + chr2_2:51819594-51819613 None:intergenic 35.0%
!! CACCAGAAGTACTTGAAAAA+TGG - chr2_2:51819785-51819804 Msa0256770:intron 35.0%
!!! ACCCATTTTTCAAGTACTTC+TGG + chr2_2:51819790-51819809 None:intergenic 35.0%
TTGACTTCAAAGAACCAGTT+TGG - chr2_2:51819815-51819834 Msa0256770:intron 35.0%
! AAGGTGGTCTTGACTATTTA+GGG - chr2_2:51819866-51819885 Msa0256770:intron 35.0%
TTTGTGCATGAACAAGGTTT+GGG + chr2_2:51819894-51819913 None:intergenic 35.0%
AGGTTTCCAAGTTGTTCTAA+TGG - chr2_2:51819930-51819949 Msa0256770:intron 35.0%
GGTTTCCAAGTTGTTCTAAT+GGG - chr2_2:51819931-51819950 Msa0256770:intron 35.0%
GGAAATCAAGAATGGAAGAT+TGG - chr2_2:51820086-51820105 Msa0256770:intron 35.0%
! TTGGCTATGTTTTCGATGTT+TGG - chr2_2:51820105-51820124 Msa0256770:intron 35.0%
TTTGTTCAAGCTATTGTCAC+AGG - chr2_2:51820132-51820151 Msa0256770:intron 35.0%
TGATCCAAAAGATTCTCCAA+AGG + chr2_2:51820165-51820184 None:intergenic 35.0%
TATCTATGATTGCCTTTGTG+TGG - chr2_2:51820259-51820278 Msa0256770:CDS 35.0%
TCTAATCATCATCCACACAA+AGG + chr2_2:51820274-51820293 None:intergenic 35.0%
AAACTCCTTTCCTTGGTCAA+AGG - chr2_2:51818792-51818811 Msa0256770:three_prime_UTR 40.0%
AGGGAAAAGAGGAAATACCA+TGG + chr2_2:51818873-51818892 None:intergenic 40.0%
TTTGTCTCGTACCATAGAGT+TGG - chr2_2:51819134-51819153 Msa0256770:CDS 40.0%
CCCAAATATTTCACTCTGTC+TGG + chr2_2:51819430-51819449 None:intergenic 40.0%
CAGACTCCTTCATACTTAAC+TGG - chr2_2:51819463-51819482 Msa0256770:intron 40.0%
TACTTAACTGGAGAATTCCC+TGG - chr2_2:51819475-51819494 Msa0256770:intron 40.0%
AATTCCCTGGTGATTATGGA+TGG - chr2_2:51819488-51819507 Msa0256770:intron 40.0%
ATTCCCTGGTGATTATGGAT+GGG - chr2_2:51819489-51819508 Msa0256770:intron 40.0%
TATCCCATCCATAATCACCA+GGG + chr2_2:51819495-51819514 None:intergenic 40.0%
!! AGAAGCATTTGCCAAGAACA+GGG - chr2_2:51819537-51819556 Msa0256770:CDS 40.0%
GGATCACAAATCTTCTCAGA+AGG - chr2_2:51819847-51819866 Msa0256770:intron 40.0%
TCACAAATCTTCTCAGAAGG+TGG - chr2_2:51819850-51819869 Msa0256770:intron 40.0%
! GAAGGTGGTCTTGACTATTT+AGG - chr2_2:51819865-51819884 Msa0256770:intron 40.0%
CTTTGTGCATGAACAAGGTT+TGG + chr2_2:51819895-51819914 None:intergenic 40.0%
AGATGCTTTGTGCATGAACA+AGG + chr2_2:51819900-51819919 None:intergenic 40.0%
! CAAAGCATCTTAGCAGTACT+AGG - chr2_2:51819910-51819929 Msa0256770:intron 40.0%
CAAGACCCATTAGAACAACT+TGG + chr2_2:51819939-51819958 None:intergenic 40.0%
! AGTTGTTCTAATGGGTCTTG+TGG - chr2_2:51819939-51819958 Msa0256770:intron 40.0%
TTAAGCTCAGCGAAAGTAAC+TGG + chr2_2:51820060-51820079 None:intergenic 40.0%
TTTCGCTGAGCTTAAAGTGA+AGG - chr2_2:51820065-51820084 Msa0256770:intron 40.0%
CAAGCTATTGTCACAGGTAA+AGG - chr2_2:51820138-51820157 Msa0256770:intron 40.0%
!! AGGACCTTTGGAGAATCTTT+TGG - chr2_2:51820158-51820177 Msa0256770:intron 40.0%
GGCATAAACCCAAGCATTAT+TGG + chr2_2:51820205-51820224 None:intergenic 40.0%
GTGTGGATGATGATTAGACA+TGG - chr2_2:51820276-51820295 Msa0256770:CDS 40.0%
AAACTCCTTTCCTTGGTCAA+AGG - chr2_2:51818792-51818811 Msa0256770:three_prime_UTR 40.0%
AGGGAAAAGAGGAAATACCA+TGG + chr2_2:51818873-51818892 None:intergenic 40.0%
TTTGTCTCGTACCATAGAGT+TGG - chr2_2:51819134-51819153 Msa0256770:CDS 40.0%
CCCAAATATTTCACTCTGTC+TGG + chr2_2:51819430-51819449 None:intergenic 40.0%
CAGACTCCTTCATACTTAAC+TGG - chr2_2:51819463-51819482 Msa0256770:intron 40.0%
TACTTAACTGGAGAATTCCC+TGG - chr2_2:51819475-51819494 Msa0256770:intron 40.0%
AATTCCCTGGTGATTATGGA+TGG - chr2_2:51819488-51819507 Msa0256770:intron 40.0%
ATTCCCTGGTGATTATGGAT+GGG - chr2_2:51819489-51819508 Msa0256770:intron 40.0%
TATCCCATCCATAATCACCA+GGG + chr2_2:51819495-51819514 None:intergenic 40.0%
!! AGAAGCATTTGCCAAGAACA+GGG - chr2_2:51819537-51819556 Msa0256770:CDS 40.0%
GGATCACAAATCTTCTCAGA+AGG - chr2_2:51819847-51819866 Msa0256770:intron 40.0%
TCACAAATCTTCTCAGAAGG+TGG - chr2_2:51819850-51819869 Msa0256770:intron 40.0%
! GAAGGTGGTCTTGACTATTT+AGG - chr2_2:51819865-51819884 Msa0256770:intron 40.0%
CTTTGTGCATGAACAAGGTT+TGG + chr2_2:51819895-51819914 None:intergenic 40.0%
AGATGCTTTGTGCATGAACA+AGG + chr2_2:51819900-51819919 None:intergenic 40.0%
! CAAAGCATCTTAGCAGTACT+AGG - chr2_2:51819910-51819929 Msa0256770:intron 40.0%
CAAGACCCATTAGAACAACT+TGG + chr2_2:51819939-51819958 None:intergenic 40.0%
! AGTTGTTCTAATGGGTCTTG+TGG - chr2_2:51819939-51819958 Msa0256770:intron 40.0%
TTAAGCTCAGCGAAAGTAAC+TGG + chr2_2:51820060-51820079 None:intergenic 40.0%
TTTCGCTGAGCTTAAAGTGA+AGG - chr2_2:51820065-51820084 Msa0256770:intron 40.0%
CAAGCTATTGTCACAGGTAA+AGG - chr2_2:51820138-51820157 Msa0256770:intron 40.0%
!! AGGACCTTTGGAGAATCTTT+TGG - chr2_2:51820158-51820177 Msa0256770:intron 40.0%
GGCATAAACCCAAGCATTAT+TGG + chr2_2:51820205-51820224 None:intergenic 40.0%
GTGTGGATGATGATTAGACA+TGG - chr2_2:51820276-51820295 Msa0256770:CDS 40.0%
TCCTTTCCTTGGTCAAAGGA+AGG - chr2_2:51818796-51818815 Msa0256770:three_prime_UTR 45.0%
CCTTTCCTTGGTCAAAGGAA+GGG - chr2_2:51818797-51818816 Msa0256770:three_prime_UTR 45.0%
! GACAACATCTCTAAGAGGGT+TGG + chr2_2:51818828-51818847 None:intergenic 45.0%
! TGGCGACAACATCTCTAAGA+GGG + chr2_2:51818832-51818851 None:intergenic 45.0%
ATGGCGACAACATCTCTAAG+AGG + chr2_2:51818833-51818852 None:intergenic 45.0%
TCTTAGAGATGTTGTCGCCA+TGG - chr2_2:51818832-51818851 Msa0256770:CDS 45.0%
CTTAGAGATGTTGTCGCCAT+GGG - chr2_2:51818833-51818852 Msa0256770:CDS 45.0%
GAAGGAGTCTGAGCTGAAAA+TGG + chr2_2:51819454-51819473 None:intergenic 45.0%
GGAGAATTCCCTGGTGATTA+TGG - chr2_2:51819484-51819503 Msa0256770:intron 45.0%
GTATCCCATCCATAATCACC+AGG + chr2_2:51819496-51819515 None:intergenic 45.0%
GATTATGGATGGGATACTGC+TGG - chr2_2:51819499-51819518 Msa0256770:CDS 45.0%
CTGTTCTTGGCAAATGCTTC+TGG + chr2_2:51819538-51819557 None:intergenic 45.0%
!! CAGAAGCATTTGCCAAGAAC+AGG - chr2_2:51819536-51819555 Msa0256770:CDS 45.0%
TGACTACTGAAGGTGATCCA+TGG - chr2_2:51819727-51819746 Msa0256770:intron 45.0%
TGAAGGTGATCCATGGAAGA+TGG - chr2_2:51819734-51819753 Msa0256770:intron 45.0%
GAAGGTGATCCATGGAAGAT+GGG - chr2_2:51819735-51819754 Msa0256770:intron 45.0%
! GAACCAGTTTGGTTCAAAGC+AGG - chr2_2:51819826-51819845 Msa0256770:intron 45.0%
! GATCCTGCTTTGAACCAAAC+TGG + chr2_2:51819832-51819851 None:intergenic 45.0%
! GTTCTAATGGGTCTTGTGGA+AGG - chr2_2:51819943-51819962 Msa0256770:intron 45.0%
GACCAAGAGGGTCAAAGTAT+TGG + chr2_2:51820026-51820045 None:intergenic 45.0%
TGTCACAGGTAAAGGACCTT+TGG - chr2_2:51820146-51820165 Msa0256770:intron 45.0%
ACCCTGTTGCCAATAATGCT+TGG - chr2_2:51820193-51820212 Msa0256770:CDS 45.0%
CCCAAGCATTATTGGCAACA+GGG + chr2_2:51820197-51820216 None:intergenic 45.0%
CCCTGTTGCCAATAATGCTT+GGG - chr2_2:51820194-51820213 Msa0256770:CDS 45.0%
ACCCAAGCATTATTGGCAAC+AGG + chr2_2:51820198-51820217 None:intergenic 45.0%
TTAAGAACCGGGCACAAACT+TGG + chr2_2:51820229-51820248 None:intergenic 45.0%
TCCTTTCCTTGGTCAAAGGA+AGG - chr2_2:51818796-51818815 Msa0256770:three_prime_UTR 45.0%
CCTTTCCTTGGTCAAAGGAA+GGG - chr2_2:51818797-51818816 Msa0256770:three_prime_UTR 45.0%
! GACAACATCTCTAAGAGGGT+TGG + chr2_2:51818828-51818847 None:intergenic 45.0%
! TGGCGACAACATCTCTAAGA+GGG + chr2_2:51818832-51818851 None:intergenic 45.0%
ATGGCGACAACATCTCTAAG+AGG + chr2_2:51818833-51818852 None:intergenic 45.0%
TCTTAGAGATGTTGTCGCCA+TGG - chr2_2:51818832-51818851 Msa0256770:CDS 45.0%
CTTAGAGATGTTGTCGCCAT+GGG - chr2_2:51818833-51818852 Msa0256770:CDS 45.0%
GAAGGAGTCTGAGCTGAAAA+TGG + chr2_2:51819454-51819473 None:intergenic 45.0%
GGAGAATTCCCTGGTGATTA+TGG - chr2_2:51819484-51819503 Msa0256770:intron 45.0%
GTATCCCATCCATAATCACC+AGG + chr2_2:51819496-51819515 None:intergenic 45.0%
GATTATGGATGGGATACTGC+TGG - chr2_2:51819499-51819518 Msa0256770:CDS 45.0%
CTGTTCTTGGCAAATGCTTC+TGG + chr2_2:51819538-51819557 None:intergenic 45.0%
!! CAGAAGCATTTGCCAAGAAC+AGG - chr2_2:51819536-51819555 Msa0256770:CDS 45.0%
TGACTACTGAAGGTGATCCA+TGG - chr2_2:51819727-51819746 Msa0256770:intron 45.0%
TGAAGGTGATCCATGGAAGA+TGG - chr2_2:51819734-51819753 Msa0256770:intron 45.0%
GAAGGTGATCCATGGAAGAT+GGG - chr2_2:51819735-51819754 Msa0256770:intron 45.0%
! GAACCAGTTTGGTTCAAAGC+AGG - chr2_2:51819826-51819845 Msa0256770:intron 45.0%
! GATCCTGCTTTGAACCAAAC+TGG + chr2_2:51819832-51819851 None:intergenic 45.0%
! GTTCTAATGGGTCTTGTGGA+AGG - chr2_2:51819943-51819962 Msa0256770:intron 45.0%
GACCAAGAGGGTCAAAGTAT+TGG + chr2_2:51820026-51820045 None:intergenic 45.0%
TGTCACAGGTAAAGGACCTT+TGG - chr2_2:51820146-51820165 Msa0256770:intron 45.0%
ACCCTGTTGCCAATAATGCT+TGG - chr2_2:51820193-51820212 Msa0256770:CDS 45.0%
CCCAAGCATTATTGGCAACA+GGG + chr2_2:51820197-51820216 None:intergenic 45.0%
CCCTGTTGCCAATAATGCTT+GGG - chr2_2:51820194-51820213 Msa0256770:CDS 45.0%
ACCCAAGCATTATTGGCAAC+AGG + chr2_2:51820198-51820217 None:intergenic 45.0%
TTAAGAACCGGGCACAAACT+TGG + chr2_2:51820229-51820248 None:intergenic 45.0%
!!! AATTTTTTACTAAAAAAATA+GGG + chr2_2:51818892-51818911 None:intergenic 5.0%
!! AAATATTAAAAACATAAAAA+TGG + chr2_2:51819620-51819639 None:intergenic 5.0%
!!! AATTTTTTACTAAAAAAATA+GGG + chr2_2:51818892-51818911 None:intergenic 5.0%
!! AAATATTAAAAACATAAAAA+TGG + chr2_2:51819620-51819639 None:intergenic 5.0%
TGTAGCAGCCATCAATGCCA+TGG + chr2_2:51818747-51818766 None:intergenic 50.0%
CCCTTCCTTTGACCAAGGAA+AGG + chr2_2:51818800-51818819 None:intergenic 50.0%
GGTGAATCTTGAGGTTCCCA+TGG + chr2_2:51818852-51818871 None:intergenic 50.0%
GGGAACCTCAAGATTCACCA+TGG - chr2_2:51818853-51818872 Msa0256770:CDS 50.0%
AACCTCAAGAGCCCTGTTCT+TGG + chr2_2:51819551-51819570 None:intergenic 50.0%
CTAGCATAGCCCATCTTCCA+TGG + chr2_2:51819747-51819766 None:intergenic 50.0%
!! CATGGAAGATGGGCTATGCT+AGG - chr2_2:51819745-51819764 Msa0256770:intron 50.0%
GTGGAAGGCTTTCGCATCAA+CGG - chr2_2:51819958-51819977 Msa0256770:intron 50.0%
TTTCGCATCAACGGTCTTCC+TGG - chr2_2:51819967-51819986 Msa0256770:intron 50.0%
ATCAACGGTCTTCCTGGTGT+CGG - chr2_2:51819973-51819992 Msa0256770:intron 50.0%
!! GGTCAAAGTATTGGCCACCA+GGG + chr2_2:51820017-51820036 None:intergenic 50.0%
GGCCAATACTTTGACCCTCT+TGG - chr2_2:51820021-51820040 Msa0256770:intron 50.0%
GATCGTCAGCTAGACCAAGA+GGG + chr2_2:51820038-51820057 None:intergenic 50.0%
TATGCCACCAAGTTTGTGCC+CGG - chr2_2:51820219-51820238 Msa0256770:CDS 50.0%
TGTAGCAGCCATCAATGCCA+TGG + chr2_2:51818747-51818766 None:intergenic 50.0%
CCCTTCCTTTGACCAAGGAA+AGG + chr2_2:51818800-51818819 None:intergenic 50.0%
GGTGAATCTTGAGGTTCCCA+TGG + chr2_2:51818852-51818871 None:intergenic 50.0%
GGGAACCTCAAGATTCACCA+TGG - chr2_2:51818853-51818872 Msa0256770:CDS 50.0%
AACCTCAAGAGCCCTGTTCT+TGG + chr2_2:51819551-51819570 None:intergenic 50.0%
CTAGCATAGCCCATCTTCCA+TGG + chr2_2:51819747-51819766 None:intergenic 50.0%
!! CATGGAAGATGGGCTATGCT+AGG - chr2_2:51819745-51819764 Msa0256770:intron 50.0%
GTGGAAGGCTTTCGCATCAA+CGG - chr2_2:51819958-51819977 Msa0256770:intron 50.0%
TTTCGCATCAACGGTCTTCC+TGG - chr2_2:51819967-51819986 Msa0256770:intron 50.0%
ATCAACGGTCTTCCTGGTGT+CGG - chr2_2:51819973-51819992 Msa0256770:intron 50.0%
!! GGTCAAAGTATTGGCCACCA+GGG + chr2_2:51820017-51820036 None:intergenic 50.0%
GGCCAATACTTTGACCCTCT+TGG - chr2_2:51820021-51820040 Msa0256770:intron 50.0%
GATCGTCAGCTAGACCAAGA+GGG + chr2_2:51820038-51820057 None:intergenic 50.0%
TATGCCACCAAGTTTGTGCC+CGG - chr2_2:51820219-51820238 Msa0256770:CDS 50.0%
CAGCTCCCTTCCTTTGACCA+AGG + chr2_2:51818805-51818824 None:intergenic 55.0%
TGCCAAGAACAGGGCTCTTG+AGG - chr2_2:51819546-51819565 Msa0256770:CDS 55.0%
!! TGGGCTATGCTAGGAGCACT+AGG - chr2_2:51819754-51819773 Msa0256770:intron 55.0%
!! AGTATTGGCCACCAGGGTAG+AGG + chr2_2:51820011-51820030 None:intergenic 55.0%
!! GGGTCAAAGTATTGGCCACC+AGG + chr2_2:51820018-51820037 None:intergenic 55.0%
GGATCGTCAGCTAGACCAAG+AGG + chr2_2:51820039-51820058 None:intergenic 55.0%
AGAACCGGGCACAAACTTGG+TGG + chr2_2:51820226-51820245 None:intergenic 55.0%
CAGCTCCCTTCCTTTGACCA+AGG + chr2_2:51818805-51818824 None:intergenic 55.0%
TGCCAAGAACAGGGCTCTTG+AGG - chr2_2:51819546-51819565 Msa0256770:CDS 55.0%
!! TGGGCTATGCTAGGAGCACT+AGG - chr2_2:51819754-51819773 Msa0256770:intron 55.0%
!! AGTATTGGCCACCAGGGTAG+AGG + chr2_2:51820011-51820030 None:intergenic 55.0%
!! GGGTCAAAGTATTGGCCACC+AGG + chr2_2:51820018-51820037 None:intergenic 55.0%
GGATCGTCAGCTAGACCAAG+AGG + chr2_2:51820039-51820058 None:intergenic 55.0%
AGAACCGGGCACAAACTTGG+TGG + chr2_2:51820226-51820245 None:intergenic 55.0%
! GGTCTTCCTGGTGTCGGAGA+GGG - chr2_2:51819979-51819998 Msa0256770:intron 60.0%
TTGTTGCCCTCTCCGACACC+AGG + chr2_2:51819988-51820007 None:intergenic 60.0%
GAGGGCAACAACCTCTACCC+TGG - chr2_2:51819997-51820016 Msa0256770:intron 60.0%
GGCAACAACCTCTACCCTGG+TGG - chr2_2:51820000-51820019 Msa0256770:intron 60.0%
! GGTCTTCCTGGTGTCGGAGA+GGG - chr2_2:51819979-51819998 Msa0256770:intron 60.0%
TTGTTGCCCTCTCCGACACC+AGG + chr2_2:51819988-51820007 None:intergenic 60.0%
GAGGGCAACAACCTCTACCC+TGG - chr2_2:51819997-51820016 Msa0256770:intron 60.0%
GGCAACAACCTCTACCCTGG+TGG - chr2_2:51820000-51820019 Msa0256770:intron 60.0%
! CGGTCTTCCTGGTGTCGGAG+AGG - chr2_2:51819978-51819997 Msa0256770:intron 65.0%
! CGGTCTTCCTGGTGTCGGAG+AGG - chr2_2:51819978-51819997 Msa0256770:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 51818663 51820403 51818663 ID=Msa0256770;Name=Msa0256770
chr2_2 mRNA 51818663 51820403 51818663 ID=Msa0256770-mRNA-1;Parent=Msa0256770;Name=Msa0256770-mRNA-1;_AED=0.08;_eAED=0.08;_QI=83|1|1|1|1|1|3|155|266
chr2_2 exon 51818663 51819327 51818663 ID=Msa0256770-mRNA-1:exon:15651;Parent=Msa0256770-mRNA-1
chr2_2 exon 51819499 51819660 51819499 ID=Msa0256770-mRNA-1:exon:15650;Parent=Msa0256770-mRNA-1
chr2_2 exon 51820192 51820403 51820192 ID=Msa0256770-mRNA-1:exon:15649;Parent=Msa0256770-mRNA-1
chr2_2 five_prime_UTR 51820321 51820403 51820321 ID=Msa0256770-mRNA-1:five_prime_utr;Parent=Msa0256770-mRNA-1
chr2_2 CDS 51820192 51820320 51820192 ID=Msa0256770-mRNA-1:cds;Parent=Msa0256770-mRNA-1
chr2_2 CDS 51819499 51819660 51819499 ID=Msa0256770-mRNA-1:cds;Parent=Msa0256770-mRNA-1
chr2_2 CDS 51818818 51819327 51818818 ID=Msa0256770-mRNA-1:cds;Parent=Msa0256770-mRNA-1
chr2_2 three_prime_UTR 51818663 51818817 51818663 ID=Msa0256770-mRNA-1:three_prime_utr;Parent=Msa0256770-mRNA-1
Gene Sequence

>Msa0256770

ATGGCATTGATGGCTGCTACAGCAAGTTCAGCAGCTGTTGTTAAACAAACTCCTTTCCTTGGTCAAAGGAAGGGAGCTGCCAACCCTCTTAGAGATGTTGTCGCCATGGGAACCTCAAGATTCACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATATTTGGGACCATTTTCAGCTCAGACTCCTTCATACTTAACTGGAGAATTCCCTGGTGATTATGGATGGGATACTGCTGGTTTATCTGCTGATCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGAAGATGGGCTATGCTAGGAGCACTAGGATGCATCACACCAGAAGTACTTGAAAAATGGGTAAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCACAAATCTTCTCAGAAGGTGGTCTTGACTATTTAGGGAACCCAAACCTTGTTCATGCACAAAGCATCTTAGCAGTACTAGGTTTCCAAGTTGTTCTAATGGGTCTTGTGGAAGGCTTTCGCATCAACGGTCTTCCTGGTGTCGGAGAGGGCAACAACCTCTACCCTGGTGGCCAATACTTTGACCCTCTTGGTCTAGCTGACGATCCAGTTACTTTCGCTGAGCTTAAAGTGAAGGAAATCAAGAATGGAAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTTCAAGCTATTGTCACAGGTAAAGGACCTTTGGAGAATCTTTTGGATCACATTGATAACCCTGTTGCCAATAATGCTTGGGTTTATGCCACCAAGTTTGTGCCCGGTTCTTAA

Protein sequence

>Msa0256770

MALMAATASSAAVVKQTPFLGQRKGAANPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS*