AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1386820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386820 MtrunA17_Chr4g0060791 98.918 462 5 0 1 462 1 462 0.0 942
Msa1386820 MtrunA17_Chr5g0440511 62.700 437 154 4 27 460 18 448 0.0 561
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386820 AT1G74470.1 83.226 465 74 2 2 462 3 467 0.0 776

Find 193 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATATGCTATTGCATTTC+AGG 0.142330 tig0020872:-26337 Msa1386820:intron
GATTTCATGTGGATAGATTT+TGG 0.169020 tig0020872:+27160 None:intergenic
CGGCGGTGGGAGATGGGTTT+GGG 0.176192 tig0020872:+26927 None:intergenic
TAGGAGAATTGGGTGGTTTC+TGG 0.183189 tig0020872:+26954 None:intergenic
ACAGCAACATGGTCACATTT+TGG 0.197386 tig0020872:+25611 None:intergenic
AGGGGATTTGAGGAAATATT+TGG 0.198675 tig0020872:-25297 Msa1386820:CDS
TTGTGATTTGTGGGAGTTTA+TGG 0.214340 tig0020872:+27109 None:intergenic
GCGGCGGTGGGAGATGGGTT+TGG 0.244292 tig0020872:+26926 None:intergenic
CTCCAATCACCAGTCTATAT+TGG 0.255864 tig0020872:+24873 None:intergenic
CTTCCTCATCGAACGTAAAA+TGG 0.256761 tig0020872:-26775 Msa1386820:CDS
TTGGCCTACTTATAAGGTTT+TGG 0.265070 tig0020872:-25255 Msa1386820:CDS
GACATATTGGCCTACTTATA+AGG 0.266128 tig0020872:-25261 Msa1386820:CDS
TGAGGAAATATTTGGAGAAA+TGG 0.276745 tig0020872:-25289 Msa1386820:CDS
GAATTTGCGGCGGTGGGAGA+TGG 0.294183 tig0020872:+26920 None:intergenic
AGAGCCGAGGACAAGATCTT+AGG 0.294607 tig0020872:-25527 Msa1386820:CDS
TTGATGATTATCTTAGAAAT+AGG 0.295715 tig0020872:-26569 Msa1386820:CDS
TTGGAAGTTGATGCTGTTAT+TGG 0.299811 tig0020872:-26411 Msa1386820:CDS
GTTTGGGGCGGTAGGAGAAT+TGG 0.301030 tig0020872:+26943 None:intergenic
CTTCGTGGCCTTGGATGTTC+TGG 0.306980 tig0020872:+25470 None:intergenic
AGAAATAGGGCTAAGGAAAA+TGG 0.307503 tig0020872:-26555 Msa1386820:CDS
TCTGCTGCTGCACCACCTGC+TGG 0.311242 tig0020872:+26825 None:intergenic
CCTGACAATCTTCGTGGCCT+TGG 0.325683 tig0020872:+25461 None:intergenic
GACGTTTCTCCTGACTTCTA+TGG 0.335820 tig0020872:-25644 Msa1386820:CDS
ACACCATTGGGAGCTTGGTT+AGG 0.343371 tig0020872:-25076 Msa1386820:CDS
TCTTCTTATGATGGGAAAAC+TGG 0.344602 tig0020872:-26456 Msa1386820:CDS
CTTCATTATTCTTCTTATGA+TGG 0.346960 tig0020872:-26465 Msa1386820:CDS
GAATTTATGAGATTTGATTT+AGG 0.351328 tig0020872:-24767 Msa1386820:three_prime_UTR
TTTGGGGCGGTAGGAGAATT+GGG 0.355885 tig0020872:+26944 None:intergenic
GATTCCTTCTCCAGAACATT+TGG 0.359585 tig0020872:+25400 None:intergenic
TGCGCACATCCTCCCACTCT+TGG 0.361852 tig0020872:+25367 None:intergenic
GAGGAAATATTTGGAGAAAT+GGG 0.367293 tig0020872:-25288 Msa1386820:CDS
GGCCTTGGATGTTCTGGTAT+AGG 0.367492 tig0020872:+25476 None:intergenic
TTAAATATACCAATGATAAT+TGG 0.368524 tig0020872:-24694 Msa1386820:three_prime_UTR
TGATGATTATCTTAGAAATA+GGG 0.374290 tig0020872:-26568 Msa1386820:CDS
GCCTTGGATGTTCTGGTATA+GGG 0.379558 tig0020872:+25477 None:intergenic
GTCAGGGAGGGTCGCGCTTG+TGG 0.383632 tig0020872:-25444 Msa1386820:CDS
GCGCTTGTGGGTGATGCTGC+TGG 0.386839 tig0020872:-25431 Msa1386820:CDS
GATAATTGGTCTAGTTGATA+AGG 0.388986 tig0020872:-24680 Msa1386820:three_prime_UTR
TTCTCCTGACTTCTATGGTT+GGG 0.390021 tig0020872:-25639 Msa1386820:CDS
CTTAAGTCTCATGAGTATAT+TGG 0.401506 tig0020872:-26612 Msa1386820:CDS
TCCCTTGTGTGTCACAGTTC+CGG 0.402699 tig0020872:+25583 None:intergenic
TCCAATCACCAGTCTATATT+GGG 0.403384 tig0020872:+24874 None:intergenic
TGGATATGGTTTGTGATTTG+TGG 0.404759 tig0020872:+27099 None:intergenic
CGACGGTGAATTTGCGGCGG+TGG 0.405841 tig0020872:+26913 None:intergenic
GAGCCGAGGACAAGATCTTA+GGG 0.407230 tig0020872:-25526 Msa1386820:CDS
CCAAGGCCACGAAGATTGTC+AGG 0.407730 tig0020872:-25461 Msa1386820:CDS
CACCATTGGGAGCTTGGTTA+GGG 0.417891 tig0020872:-25075 Msa1386820:CDS
GGCTACGTGACCAAATGTTC+TGG 0.417975 tig0020872:-25410 Msa1386820:CDS
TGGTTAGGGCTAATGCTCTA+AGG 0.419103 tig0020872:-25061 Msa1386820:CDS
AGAGGCAATTGTGCAGGGTT+CGG 0.420268 tig0020872:-25345 Msa1386820:CDS
GGATATGGTTTGTGATTTGT+GGG 0.424823 tig0020872:+27100 None:intergenic
TATCAACACCATTGGGAGCT+TGG 0.425273 tig0020872:-25081 Msa1386820:CDS
AGTGAGGGAGTGAGGAATGA+GGG 0.428654 tig0020872:+27039 None:intergenic
TCAACTAGACCAATTATCAT+TGG 0.432252 tig0020872:+24685 None:intergenic
TGATAAATTAATATGTATAC+AGG 0.436388 tig0020872:+24980 None:intergenic
TCAACAAAAGCTTCCCTAGC+AGG 0.436433 tig0020872:+25200 None:intergenic
TTCATTATTCTTCTTATGAT+GGG 0.438606 tig0020872:-26464 Msa1386820:CDS
ACTGGTGATTGGAGCATAGC+AGG 0.439829 tig0020872:-24864 Msa1386820:three_prime_UTR
CTGTACAAGACTGTTGTGCC+TGG 0.441769 tig0020872:-25131 Msa1386820:CDS
GAAGAATAATGAAGAACATA+AGG 0.446087 tig0020872:+26474 None:intergenic
TGCATGTAGTATTTATCAGC+TGG 0.447435 tig0020872:-24789 Msa1386820:three_prime_UTR
AATTATCTGTATAAGCAAAC+GGG 0.451639 tig0020872:-24914 Msa1386820:three_prime_UTR
TAATTATCTGTATAAGCAAA+CGG 0.452033 tig0020872:-24915 Msa1386820:three_prime_UTR
GGCGGTGGGAGATGGGTTTG+GGG 0.452723 tig0020872:+26928 None:intergenic
AAAAGCTTCCCTAGCAGGAT+TGG 0.453043 tig0020872:+25205 None:intergenic
TGGTTGAAGAAGGGGATTTG+AGG 0.453345 tig0020872:-25307 Msa1386820:CDS
AGATATATATAACTAACATA+AGG 0.453444 tig0020872:+24735 None:intergenic
AAGTGAGGGAGTGAGGAATG+AGG 0.454571 tig0020872:+27038 None:intergenic
GGGAAGAGGATGGTTGAAGA+AGG 0.458022 tig0020872:-25317 Msa1386820:CDS
GTCATCGGCGGTGGTCCAGC+AGG 0.459749 tig0020872:-26840 Msa1386820:CDS
GATGGGAAAACTGGTGGGGT+TGG 0.460324 tig0020872:-26447 Msa1386820:CDS
GGAAGAGGATGGTTGAAGAA+GGG 0.461222 tig0020872:-25316 Msa1386820:CDS
AATTTGCGGCGGTGGGAGAT+GGG 0.462248 tig0020872:+26921 None:intergenic
AACCTCCGTGTCGCTGTCAT+CGG 0.466562 tig0020872:-26855 Msa1386820:CDS
AGAAATGGGACAAGACATAT+TGG 0.468367 tig0020872:-25274 Msa1386820:CDS
CGGAGAAATCATCTTCATCT+TGG 0.469756 tig0020872:+26665 None:intergenic
AATGGAGCGAATATTATCAA+TGG 0.469785 tig0020872:-26537 Msa1386820:CDS
GGAGATGGGTTTGGGGCGGT+AGG 0.470092 tig0020872:+26935 None:intergenic
TGAGGGAAAGTGAGGGAGTG+AGG 0.480797 tig0020872:+27031 None:intergenic
TTGTGCAGGGTTCGGCGAAT+GGG 0.480844 tig0020872:-25337 Msa1386820:CDS
GGAGGCCGAGGAAGGATTTG+AGG 0.485174 tig0020872:+26988 None:intergenic
AATGGAGCTCATGGTGATTG+AGG 0.485588 tig0020872:+27013 None:intergenic
GTGCGCAGAGGCAATTGTGC+AGG 0.486232 tig0020872:-25351 Msa1386820:CDS
TGACAGCGACACGGAGGTTA+CGG 0.488882 tig0020872:+26859 None:intergenic
ATTGTGCAGGGTTCGGCGAA+TGG 0.489244 tig0020872:-25338 Msa1386820:CDS
CAGCAACGACGGTGAATTTG+CGG 0.490011 tig0020872:+26907 None:intergenic
AATTAATATGTATACAGGTC+AGG 0.493949 tig0020872:+24985 None:intergenic
ACCCTCCCTGACAATCTTCG+TGG 0.495621 tig0020872:+25455 None:intergenic
TTTCTCCTGACTTCTATGGT+TGG 0.498525 tig0020872:-25640 Msa1386820:CDS
GTGAGGAAATGCGGAGGCCG+AGG 0.498992 tig0020872:+26976 None:intergenic
GAAGAGGATGGTTGAAGAAG+GGG 0.499187 tig0020872:-25315 Msa1386820:CDS
TCCCAATATAGACTGGTGAT+TGG 0.500678 tig0020872:-24875 Msa1386820:three_prime_UTR
GATATATATAACTAACATAA+GGG 0.500690 tig0020872:+24736 None:intergenic
TTGTGGGAGTTTATGGCCGT+TGG 0.501989 tig0020872:+27116 None:intergenic
GCCATTCCTCTCTGCATGGT+TGG 0.506344 tig0020872:-26729 Msa1386820:CDS
TCGAATGTCGCCGTCGACAT+TGG 0.508885 tig0020872:-26642 Msa1386820:CDS
ATGGAGCGAATATTATCAAT+GGG 0.512254 tig0020872:-26536 Msa1386820:CDS
CATGCAATCCCAATATAGAC+TGG 0.523727 tig0020872:-24882 Msa1386820:three_prime_UTR
CGTGTCGCTGTCATCGGCGG+TGG 0.524419 tig0020872:-26849 Msa1386820:CDS
GAGGCCGAGGAAGGATTTGA+GGG 0.525450 tig0020872:+26989 None:intergenic
ATCTATTTCGCAGCCAAGAG+TGG 0.527822 tig0020872:-25380 Msa1386820:CDS
ATGGAGCTCATGGTGATTGA+GGG 0.528894 tig0020872:+27014 None:intergenic
TGTTGTGCCTGGGAGTCCAT+TGG 0.531085 tig0020872:-25120 Msa1386820:CDS
GATGCTGTTATTGGTGCTGA+TGG 0.532399 tig0020872:-26402 Msa1386820:CDS
GACCATGTTGCTGTCGGCAC+CGG 0.535481 tig0020872:-25602 Msa1386820:CDS
AGTTGGCTATCAACACCATT+GGG 0.537596 tig0020872:-25088 Msa1386820:CDS
CTTATGATGGGAAAACTGGT+GGG 0.540873 tig0020872:-26452 Msa1386820:CDS
GCAGCAGAAACACTAGCAAA+AGG 0.541139 tig0020872:-26810 Msa1386820:CDS
TTTACAGGTCCAATCCTGCT+AGG 0.541349 tig0020872:-25214 Msa1386820:CDS
GACTTATTACGAGGATCTTG+CGG 0.541408 tig0020872:-25684 Msa1386820:CDS
AACACCCAACCATAGAAGTC+AGG 0.543879 tig0020872:+25635 None:intergenic
CTCCGTGTCGCTGTCATCGG+CGG 0.543928 tig0020872:-26852 Msa1386820:CDS
ATATCCTCCAATGGACTCCC+AGG 0.545006 tig0020872:+25113 None:intergenic
TCTTATGATGGGAAAACTGG+TGG 0.545852 tig0020872:-26453 Msa1386820:CDS
ATATCCAAAACCTTATAAGT+AGG 0.547753 tig0020872:+25251 None:intergenic
GTCTCATGAGTATATTGGTA+TGG 0.549402 tig0020872:-26607 Msa1386820:CDS
GGGAGTTTATGGCCGTTGGA+TGG 0.554741 tig0020872:+27120 None:intergenic
GAATTGGGTGGTTTCTGGTG+AGG 0.558563 tig0020872:+26959 None:intergenic
TTACAGGTCCAATCCTGCTA+GGG 0.562987 tig0020872:-25213 Msa1386820:CDS
AGGGTTCGGCGAATGGGAAG+AGG 0.563143 tig0020872:-25331 Msa1386820:CDS
AAGTTGGCTATCAACACCAT+TGG 0.564334 tig0020872:-25089 Msa1386820:CDS
CTGGTGATTGGAGCATAGCA+GGG 0.564836 tig0020872:-24863 Msa1386820:three_prime_UTR
TTTGAGGGCAATGGAGCTCA+TGG 0.565078 tig0020872:+27004 None:intergenic
GGATCTTGCGGAGATGTATG+TGG 0.566935 tig0020872:-25672 Msa1386820:CDS
AGGAGCCATTCCTCTCTGCA+TGG 0.568282 tig0020872:-26733 Msa1386820:CDS
GACGGTGAATTTGCGGCGGT+GGG 0.569026 tig0020872:+26914 None:intergenic
GAGGAAGGATTTGAGGGCAA+TGG 0.569467 tig0020872:+26995 None:intergenic
GTGAGGGAGTGAGGAATGAG+GGG 0.573874 tig0020872:+27040 None:intergenic
TCCATTGGAGGATATCAAGT+TGG 0.576911 tig0020872:-25105 Msa1386820:CDS
CACCGGAACTGTGACACACA+AGG 0.577442 tig0020872:-25585 Msa1386820:CDS
GTTGCTAAGTCTATTGATGC+TGG 0.578907 tig0020872:-26366 Msa1386820:CDS
ATGTCGCCGTCGACATTGGT+AGG 0.579219 tig0020872:-26638 Msa1386820:CDS
TGGTTTCTGGTGAGGAAATG+CGG 0.579219 tig0020872:+26967 None:intergenic
ATGTCGACGGCGACATTCGA+CGG 0.582173 tig0020872:+26645 None:intergenic
ATCGGCGGTGGTCCAGCAGG+TGG 0.582561 tig0020872:-26837 Msa1386820:CDS
ACCCTATACCAGAACATCCA+AGG 0.583597 tig0020872:-25478 Msa1386820:CDS
ATTGCCCTCAAATCCTTCCT+CGG 0.585608 tig0020872:-26993 Msa1386820:CDS
GCCACGAAGATTGTCAGGGA+GGG 0.591898 tig0020872:-25456 Msa1386820:CDS
TGGCCGTTGGATGGATGCGA+TGG 0.593987 tig0020872:+27129 None:intergenic
GGTGGGAGATGGGTTTGGGG+CGG 0.594547 tig0020872:+26931 None:intergenic
TTATCTTAGAAATAGGGCTA+AGG 0.596386 tig0020872:-26562 Msa1386820:CDS
TCTATTTCGCAGCCAAGAGT+GGG 0.596561 tig0020872:-25379 Msa1386820:CDS
GTGACCAAATGTTCTGGAGA+AGG 0.597062 tig0020872:-25404 Msa1386820:CDS
CGGCGGTCAATGATGTCTAG+TGG 0.598418 tig0020872:+26693 None:intergenic
GGAAATGCGGAGGCCGAGGA+AGG 0.607962 tig0020872:+26980 None:intergenic
TTATGATGGGAAAACTGGTG+GGG 0.607967 tig0020872:-26451 Msa1386820:CDS
TGGAGAGTTGAGATTTCATG+TGG 0.610255 tig0020872:+27149 None:intergenic
GATTCTTAATGATCTTACAA+AGG 0.611585 tig0020872:-24658 Msa1386820:three_prime_UTR
TGTACAAGACTGTTGTGCCT+GGG 0.612477 tig0020872:-25130 Msa1386820:CDS
TCTCCATCGCATCCATCCAA+CGG 0.613499 tig0020872:-27132 Msa1386820:five_prime_UTR
ATGGTGATTGAGGGAAAGTG+AGG 0.615134 tig0020872:+27023 None:intergenic
TTAGGGCTAATGCTCTAAGG+AGG 0.617977 tig0020872:-25058 Msa1386820:CDS
TGCGCAGAGGCAATTGTGCA+GGG 0.620081 tig0020872:-25350 Msa1386820:CDS
GGTCAATGATGTCTAGTGGA+AGG 0.620194 tig0020872:+26697 None:intergenic
GCCAACTTGATATCCTCCAA+TGG 0.620794 tig0020872:+25104 None:intergenic
CACCGCCGATGACAGCGACA+CGG 0.621764 tig0020872:+26850 None:intergenic
ACCAACCATGCAGAGAGGAA+TGG 0.622279 tig0020872:+26728 None:intergenic
AGAGGAATGGCTCCTCCACA+TGG 0.622376 tig0020872:+26741 None:intergenic
TTCGGCGAATGGGAAGAGGA+TGG 0.627116 tig0020872:-25327 Msa1386820:CDS
TTCCGGTGCCGACAGCAACA+TGG 0.628007 tig0020872:+25600 None:intergenic
TAATGCTCTAAGGAGGGAGA+TGG 0.631923 tig0020872:-25051 Msa1386820:CDS
AGCCCTAACCAAGCTCCCAA+TGG 0.636991 tig0020872:+25073 None:intergenic
GCAGAAACACTAGCAAAAGG+TGG 0.639267 tig0020872:-26807 Msa1386820:CDS
TAGGGCTAATGCTCTAAGGA+GGG 0.641569 tig0020872:-25057 Msa1386820:CDS
ATTTCGCAGCCAAGAGTGGG+AGG 0.644515 tig0020872:-25376 Msa1386820:CDS
TCATCTTCATCTTGGTAACA+CGG 0.646038 tig0020872:+26673 None:intergenic
GCTGGTTGCTGCAGCAACGA+CGG 0.647516 tig0020872:+26896 None:intergenic
TGGTGATTGAGGGAAAGTGA+GGG 0.648485 tig0020872:+27024 None:intergenic
AGAAATTCCAACTAGCAACA+AGG 0.653031 tig0020872:-25553 Msa1386820:CDS
GGGCAAGATTATCCGTGTGG+AGG 0.655629 tig0020872:-25504 Msa1386820:CDS
GCCGAGGACAAGATCTTAGG+GGG 0.656426 tig0020872:-25524 Msa1386820:CDS
ATGAGTATATTGGTATGGTG+AGG 0.657171 tig0020872:-26602 Msa1386820:CDS
ACCGGAACTGTGACACACAA+GGG 0.664074 tig0020872:-25584 Msa1386820:CDS
GACAACTGCAAACCATGTGG+AGG 0.664445 tig0020872:-26753 Msa1386820:CDS
GGCCACGAAGATTGTCAGGG+AGG 0.664448 tig0020872:-25457 Msa1386820:CDS
AGCAACAAGGAAAAGAGCCG+AGG 0.665901 tig0020872:-25540 Msa1386820:CDS
CAAGGCCACGAAGATTGTCA+GGG 0.673953 tig0020872:-25460 Msa1386820:CDS
AAGTGTCCTACCAATGTCGA+CGG 0.676648 tig0020872:+26632 None:intergenic
GATCTTGCGGAGATGTATGT+GGG 0.677527 tig0020872:-25671 Msa1386820:CDS
GTATAGGGTGAGCCTCCACA+CGG 0.681936 tig0020872:+25492 None:intergenic
GAGTGGGAGGATGTGCGCAG+AGG 0.683072 tig0020872:-25363 Msa1386820:CDS
CAACGACGGTGAATTTGCGG+CGG 0.685263 tig0020872:+26910 None:intergenic
AAATGTGACCATGTTGCTGT+CGG 0.686456 tig0020872:-25608 Msa1386820:CDS
ATGGACAACTGCAAACCATG+TGG 0.691065 tig0020872:-26756 Msa1386820:CDS
TATTGGTATGGTGAGGCGTG+AGG 0.696798 tig0020872:-26595 Msa1386820:CDS
AACTCACCAACCATGCAGAG+AGG 0.710486 tig0020872:+26723 None:intergenic
AGCCGAGGACAAGATCTTAG+GGG 0.711384 tig0020872:-25525 Msa1386820:CDS
GGGGCGGTAGGAGAATTGGG+TGG 0.719493 tig0020872:+26947 None:intergenic
CGCCGATGACAGCGACACGG+AGG 0.724003 tig0020872:+26853 None:intergenic
TGACAAAATGACTTATTACG+AGG 0.726774 tig0020872:-25693 Msa1386820:CDS
TTTCTGGTGAGGAAATGCGG+AGG 0.741612 tig0020872:+26970 None:intergenic
TCTTCATCTTGGTAACACGG+CGG 0.792919 tig0020872:+26676 None:intergenic
ACAGTGATGAATGACTATTG+TGG 0.842544 tig0020872:+25011 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATAAATTAATATGTATAC+AGG + tig0020872:26735-26754 None:intergenic 15.0%
!! GATATATATAACTAACATAA+GGG + tig0020872:26979-26998 None:intergenic 15.0%
!! AGATATATATAACTAACATA+AGG + tig0020872:26980-26999 None:intergenic 15.0%
!! TTAAATATACCAATGATAAT+TGG - tig0020872:27018-27037 Msa1386820:exon 15.0%
!!! TTGATGATTATCTTAGAAAT+AGG - tig0020872:25143-25162 Msa1386820:CDS 20.0%
!! TGATGATTATCTTAGAAATA+GGG - tig0020872:25144-25163 Msa1386820:CDS 20.0%
!! TTCATTATTCTTCTTATGAT+GGG - tig0020872:25248-25267 Msa1386820:CDS 20.0%
!! AATTGTAAGATGTAACAATT+TGG - tig0020872:25536-25555 Msa1386820:CDS 20.0%
!!! ACAATTTGGTCTTAAAATTA+AGG - tig0020872:25550-25569 Msa1386820:CDS 20.0%
!!! CAATTTGGTCTTAAAATTAA+GGG - tig0020872:25551-25570 Msa1386820:CDS 20.0%
!!! TCACATTAGTGTTATTATTT+TGG - tig0020872:25594-25613 Msa1386820:CDS 20.0%
!!! TCAAGTATTGTTCAATTTAA+GGG + tig0020872:25759-25778 None:intergenic 20.0%
!!! ATCAAGTATTGTTCAATTTA+AGG + tig0020872:25760-25779 None:intergenic 20.0%
!! TAATTATCTGTATAAGCAAA+CGG - tig0020872:26797-26816 Msa1386820:CDS 20.0%
!!! GAATTTATGAGATTTGATTT+AGG - tig0020872:26945-26964 Msa1386820:CDS 20.0%
!! ATTTCATGTGGATAGATTTT+GGG + tig0020872:24554-24573 None:intergenic 25.0%
! GAAGAATAATGAAGAACATA+AGG + tig0020872:25241-25260 None:intergenic 25.0%
! CTTCATTATTCTTCTTATGA+TGG - tig0020872:25247-25266 Msa1386820:CDS 25.0%
!! TTCTGTGAATTAGCAATTTT+TGG - tig0020872:25438-25457 Msa1386820:CDS 25.0%
! ATATGAAACCTTCCTAAATA+CGG + tig0020872:25657-25676 None:intergenic 25.0%
!!! CAAATTAGTCTTGAAATAGT+AGG + tig0020872:25854-25873 None:intergenic 25.0%
! CTACTATTTCAAGACTAATT+TGG - tig0020872:25852-25871 Msa1386820:intron 25.0%
!!! ATGTGGTTTCTATTTTTGAA+AGG - tig0020872:25924-25943 Msa1386820:intron 25.0%
!! ATTAGCATGTTTCATTTTGA+TGG - tig0020872:25958-25977 Msa1386820:intron 25.0%
!!! TAATAAGTCATTTTGTCATC+CGG + tig0020872:26017-26036 None:intergenic 25.0%
! ATATCCAAAACCTTATAAGT+AGG + tig0020872:26464-26483 None:intergenic 25.0%
! AATTAATATGTATACAGGTC+AGG + tig0020872:26730-26749 None:intergenic 25.0%
! AATTATCTGTATAAGCAAAC+GGG - tig0020872:26798-26817 Msa1386820:CDS 25.0%
! GATTCTTAATGATCTTACAA+AGG - tig0020872:27054-27073 Msa1386820:five_prime_UTR 25.0%
!! CAATGTAAGAATTTTATCAG+TGG - tig0020872:27098-27117 Msa1386820:five_prime_UTR 25.0%
! GATTTCATGTGGATAGATTT+TGG + tig0020872:24555-24574 None:intergenic 30.0%
!!! TTTTATTGGAATGGTGGATA+TGG + tig0020872:24630-24649 None:intergenic 30.0%
!! TTTGTGGTGATGTGTTTTAT+TGG + tig0020872:24644-24663 None:intergenic 30.0%
CTTAAGTCTCATGAGTATAT+TGG - tig0020872:25100-25119 Msa1386820:CDS 30.0%
TTATCTTAGAAATAGGGCTA+AGG - tig0020872:25150-25169 Msa1386820:CDS 30.0%
AATGGAGCGAATATTATCAA+TGG - tig0020872:25175-25194 Msa1386820:CDS 30.0%
ATGGAGCGAATATTATCAAT+GGG - tig0020872:25176-25195 Msa1386820:CDS 30.0%
!!! CAATGGGTTGTTTTTGAAAA+TGG - tig0020872:25192-25211 Msa1386820:CDS 30.0%
TGAATATGCTATTGCATTTC+AGG - tig0020872:25375-25394 Msa1386820:CDS 30.0%
AGGGTAAATACTCTATAACA+TGG - tig0020872:25570-25589 Msa1386820:CDS 30.0%
! TGAGTTTGAAATCCGTATTT+AGG - tig0020872:25642-25661 Msa1386820:CDS 30.0%
! TTTGAAATCCGTATTTAGGA+AGG - tig0020872:25646-25665 Msa1386820:CDS 30.0%
AATGAGACCAATGACAAAAT+TGG + tig0020872:25804-25823 None:intergenic 30.0%
TTGGTCTCATTTACTCATTT+AGG - tig0020872:25813-25832 Msa1386820:intron 30.0%
TGGTCTCATTTACTCATTTA+GGG - tig0020872:25814-25833 Msa1386820:intron 30.0%
AATAGTAGGATTAGACAACT+TGG + tig0020872:25840-25859 None:intergenic 30.0%
! TAGTTCATTGTGGTGTTTTA+TGG - tig0020872:25896-25915 Msa1386820:intron 30.0%
! GGTGTTTTATGGTTTATATG+TGG - tig0020872:25907-25926 Msa1386820:intron 30.0%
!! CATGTTTCATTTTGATGGTA+TGG - tig0020872:25963-25982 Msa1386820:intron 30.0%
ATGGTATGGTTAAATTTCTC+AGG - tig0020872:25977-25996 Msa1386820:intron 30.0%
!! AATAAGTCATTTTGTCATCC+GGG + tig0020872:26016-26035 None:intergenic 30.0%
TGACAAAATGACTTATTACG+AGG - tig0020872:26019-26038 Msa1386820:intron 30.0%
TGAGGAAATATTTGGAGAAA+TGG - tig0020872:26423-26442 Msa1386820:CDS 30.0%
GAGGAAATATTTGGAGAAAT+GGG - tig0020872:26424-26443 Msa1386820:CDS 30.0%
TCAACTAGACCAATTATCAT+TGG + tig0020872:27030-27049 None:intergenic 30.0%
! GATAATTGGTCTAGTTGATA+AGG - tig0020872:27032-27051 Msa1386820:five_prime_UTR 30.0%
! TTGTGATTTGTGGGAGTTTA+TGG + tig0020872:24606-24625 None:intergenic 35.0%
! GGATATGGTTTGTGATTTGT+GGG + tig0020872:24615-24634 None:intergenic 35.0%
! TGGATATGGTTTGTGATTTG+TGG + tig0020872:24616-24635 None:intergenic 35.0%
!! GATGTGTTTTATTGGAATGG+TGG + tig0020872:24636-24655 None:intergenic 35.0%
!! GGTGATGTGTTTTATTGGAA+TGG + tig0020872:24639-24658 None:intergenic 35.0%
!! ATGAGGGGTTTGAAATTTTG+TGG + tig0020872:24660-24679 None:intergenic 35.0%
! TCATCTTCATCTTGGTAACA+CGG + tig0020872:25042-25061 None:intergenic 35.0%
GTCTCATGAGTATATTGGTA+TGG - tig0020872:25105-25124 Msa1386820:CDS 35.0%
ATGAGTATATTGGTATGGTG+AGG - tig0020872:25110-25129 Msa1386820:CDS 35.0%
AGAAATAGGGCTAAGGAAAA+TGG - tig0020872:25157-25176 Msa1386820:CDS 35.0%
!! TAAGGCGCATTCTTTTGTTT+AGG + tig0020872:25223-25242 None:intergenic 35.0%
! TCTTCTTATGATGGGAAAAC+TGG - tig0020872:25256-25275 Msa1386820:CDS 35.0%
!! GGTTGGTGAAAAAACTACTT+TGG - tig0020872:25282-25301 Msa1386820:CDS 35.0%
!! TTGGAAGTTGATGCTGTTAT+TGG - tig0020872:25301-25320 Msa1386820:CDS 35.0%
ATGTCAACCGAGTCTTTAAT+CGG - tig0020872:25467-25486 Msa1386820:CDS 35.0%
!! TTTATAGTCTTGTCTTGTGC+AGG - tig0020872:25698-25717 Msa1386820:CDS 35.0%
!! TTATAGTCTTGTCTTGTGCA+GGG - tig0020872:25699-25718 Msa1386820:CDS 35.0%
ACAAAATTGGCATGCACAAA+AGG + tig0020872:25791-25810 None:intergenic 35.0%
GACTTAGATGTAGTTCATTG+TGG - tig0020872:25886-25905 Msa1386820:intron 35.0%
ATGGTTAAATTTCTCAGGAG+AGG - tig0020872:25982-26001 Msa1386820:intron 35.0%
AGAAATTCCAACTAGCAACA+AGG - tig0020872:26159-26178 Msa1386820:intron 35.0%
AGGGGATTTGAGGAAATATT+TGG - tig0020872:26415-26434 Msa1386820:CDS 35.0%
AGAAATGGGACAAGACATAT+TGG - tig0020872:26438-26457 Msa1386820:CDS 35.0%
! GACATATTGGCCTACTTATA+AGG - tig0020872:26451-26470 Msa1386820:CDS 35.0%
! TTGGCCTACTTATAAGGTTT+TGG - tig0020872:26457-26476 Msa1386820:CDS 35.0%
!!! GGTTTTGGATATTCTTCAGA+AGG - tig0020872:26472-26491 Msa1386820:CDS 35.0%
!!! TTCTTCAGAAGGTGTTTTAC+AGG - tig0020872:26483-26502 Msa1386820:CDS 35.0%
ACAGTGATGAATGACTATTG+TGG + tig0020872:26704-26723 None:intergenic 35.0%
TCCAATCACCAGTCTATATT+GGG + tig0020872:26841-26860 None:intergenic 35.0%
TGCATGTAGTATTTATCAGC+TGG - tig0020872:26923-26942 Msa1386820:CDS 35.0%
TGGAGAGTTGAGATTTCATG+TGG + tig0020872:24566-24585 None:intergenic 40.0%
! CATTTTACGTTCGATGAGGA+AGG + tig0020872:24939-24958 None:intergenic 40.0%
CTTCCTCATCGAACGTAAAA+TGG - tig0020872:24937-24956 Msa1386820:three_prime_UTR 40.0%
! TGTCCATTTTACGTTCGATG+AGG + tig0020872:24943-24962 None:intergenic 40.0%
CGGAGAAATCATCTTCATCT+TGG + tig0020872:25050-25069 None:intergenic 40.0%
! TCTTATGATGGGAAAACTGG+TGG - tig0020872:25259-25278 Msa1386820:CDS 40.0%
! CTTATGATGGGAAAACTGGT+GGG - tig0020872:25260-25279 Msa1386820:CDS 40.0%
! TTATGATGGGAAAACTGGTG+GGG - tig0020872:25261-25280 Msa1386820:CDS 40.0%
GTTGCTAAGTCTATTGATGC+TGG - tig0020872:25346-25365 Msa1386820:CDS 40.0%
TGTCAACCGAGTCTTTAATC+GGG - tig0020872:25468-25487 Msa1386820:CDS 40.0%
CTAGAACCCGATTAAAGACT+CGG + tig0020872:25477-25496 None:intergenic 40.0%
! GTGCATGCCAATTTTGTCAT+TGG - tig0020872:25794-25813 Msa1386820:intron 40.0%
TCAGGAGAGGATAAAAATCC+CGG - tig0020872:25995-26014 Msa1386820:intron 40.0%
GACTTATTACGAGGATCTTG+CGG - tig0020872:26028-26047 Msa1386820:intron 40.0%
TTTCTCCTGACTTCTATGGT+TGG - tig0020872:26072-26091 Msa1386820:intron 40.0%
TTCTCCTGACTTCTATGGTT+GGG - tig0020872:26073-26092 Msa1386820:intron 40.0%
! CAGCAACATGGTCACATTTT+GGG + tig0020872:26103-26122 None:intergenic 40.0%
! ACAGCAACATGGTCACATTT+TGG + tig0020872:26104-26123 None:intergenic 40.0%
AAATGTGACCATGTTGCTGT+CGG - tig0020872:26104-26123 Msa1386820:intron 40.0%
! CTCTTTTCCTTGTTGCTAGT+TGG + tig0020872:26169-26188 None:intergenic 40.0%
GATTCCTTCTCCAGAACATT+TGG + tig0020872:26315-26334 None:intergenic 40.0%
TCCATTGGAGGATATCAAGT+TGG - tig0020872:26607-26626 Msa1386820:CDS 40.0%
AAGTTGGCTATCAACACCAT+TGG - tig0020872:26623-26642 Msa1386820:CDS 40.0%
AGTTGGCTATCAACACCATT+GGG - tig0020872:26624-26643 Msa1386820:CDS 40.0%
CATGCAATCCCAATATAGAC+TGG - tig0020872:26830-26849 Msa1386820:CDS 40.0%
TCCCAATATAGACTGGTGAT+TGG - tig0020872:26837-26856 Msa1386820:CDS 40.0%
CTCCAATCACCAGTCTATAT+TGG + tig0020872:26842-26861 None:intergenic 40.0%
TGGTGATTGAGGGAAAGTGA+GGG + tig0020872:24691-24710 None:intergenic 45.0%
ATGGTGATTGAGGGAAAGTG+AGG + tig0020872:24692-24711 None:intergenic 45.0%
ATGGAGCTCATGGTGATTGA+GGG + tig0020872:24701-24720 None:intergenic 45.0%
AATGGAGCTCATGGTGATTG+AGG + tig0020872:24702-24721 None:intergenic 45.0%
ATTGCCCTCAAATCCTTCCT+CGG - tig0020872:24719-24738 Msa1386820:three_prime_UTR 45.0%
!! TGGTTTCTGGTGAGGAAATG+CGG + tig0020872:24748-24767 None:intergenic 45.0%
TAGGAGAATTGGGTGGTTTC+TGG + tig0020872:24761-24780 None:intergenic 45.0%
!!! GGTTACGGCCATCGATTTTT+GGG + tig0020872:24841-24860 None:intergenic 45.0%
!!! AGGTTACGGCCATCGATTTT+TGG + tig0020872:24842-24861 None:intergenic 45.0%
GCAGCAGAAACACTAGCAAA+AGG - tig0020872:24902-24921 Msa1386820:three_prime_UTR 45.0%
GCAGAAACACTAGCAAAAGG+TGG - tig0020872:24905-24924 Msa1386820:three_prime_UTR 45.0%
ATGGACAACTGCAAACCATG+TGG - tig0020872:24956-24975 Msa1386820:three_prime_UTR 45.0%
GGTCAATGATGTCTAGTGGA+AGG + tig0020872:25018-25037 None:intergenic 45.0%
! TCTTCATCTTGGTAACACGG+CGG + tig0020872:25039-25058 None:intergenic 45.0%
AAGTGTCCTACCAATGTCGA+CGG + tig0020872:25083-25102 None:intergenic 45.0%
!! GATGCTGTTATTGGTGCTGA+TGG - tig0020872:25310-25329 Msa1386820:CDS 45.0%
CGAGTCTTTAATCGGGTTCT+AGG - tig0020872:25475-25494 Msa1386820:CDS 45.0%
GATCTTGCGGAGATGTATGT+GGG - tig0020872:26041-26060 Msa1386820:intron 45.0%
GACGTTTCTCCTGACTTCTA+TGG - tig0020872:26068-26087 Msa1386820:intron 45.0%
AACACCCAACCATAGAAGTC+AGG + tig0020872:26080-26099 None:intergenic 45.0%
ACCCTATACCAGAACATCCA+AGG - tig0020872:26234-26253 Msa1386820:intron 45.0%
GCCTTGGATGTTCTGGTATA+GGG + tig0020872:26238-26257 None:intergenic 45.0%
!! GTGACCAAATGTTCTGGAGA+AGG - tig0020872:26308-26327 Msa1386820:intron 45.0%
ATCTATTTCGCAGCCAAGAG+TGG - tig0020872:26332-26351 Msa1386820:intron 45.0%
TCTATTTCGCAGCCAAGAGT+GGG - tig0020872:26333-26352 Msa1386820:intron 45.0%
GGAAGAGGATGGTTGAAGAA+GGG - tig0020872:26396-26415 Msa1386820:CDS 45.0%
GAAGAGGATGGTTGAAGAAG+GGG - tig0020872:26397-26416 Msa1386820:CDS 45.0%
TGGTTGAAGAAGGGGATTTG+AGG - tig0020872:26405-26424 Msa1386820:CDS 45.0%
TTTACAGGTCCAATCCTGCT+AGG - tig0020872:26498-26517 Msa1386820:CDS 45.0%
TTACAGGTCCAATCCTGCTA+GGG - tig0020872:26499-26518 Msa1386820:CDS 45.0%
AAAAGCTTCCCTAGCAGGAT+TGG + tig0020872:26510-26529 None:intergenic 45.0%
TCAACAAAAGCTTCCCTAGC+AGG + tig0020872:26515-26534 None:intergenic 45.0%
TGTACAAGACTGTTGTGCCT+GGG - tig0020872:26582-26601 Msa1386820:CDS 45.0%
GCCAACTTGATATCCTCCAA+TGG + tig0020872:26611-26630 None:intergenic 45.0%
TATCAACACCATTGGGAGCT+TGG - tig0020872:26631-26650 Msa1386820:CDS 45.0%
TGGTTAGGGCTAATGCTCTA+AGG - tig0020872:26651-26670 Msa1386820:CDS 45.0%
!! TTAGGGCTAATGCTCTAAGG+AGG - tig0020872:26654-26673 Msa1386820:CDS 45.0%
!! TAGGGCTAATGCTCTAAGGA+GGG - tig0020872:26655-26674 Msa1386820:CDS 45.0%
!! TAATGCTCTAAGGAGGGAGA+TGG - tig0020872:26661-26680 Msa1386820:CDS 45.0%
!!! TTACAATTTTAAAATTAAAT+TGG + tig0020872:25524-25543 None:intergenic 5.0%
TCTCCATCGCATCCATCCAA+CGG - tig0020872:24580-24599 Msa1386820:three_prime_UTR 50.0%
TTGTGGGAGTTTATGGCCGT+TGG + tig0020872:24599-24618 None:intergenic 50.0%
AGTGAGGGAGTGAGGAATGA+GGG + tig0020872:24676-24695 None:intergenic 50.0%
AAGTGAGGGAGTGAGGAATG+AGG + tig0020872:24677-24696 None:intergenic 50.0%
TTTGAGGGCAATGGAGCTCA+TGG + tig0020872:24711-24730 None:intergenic 50.0%
GAGGAAGGATTTGAGGGCAA+TGG + tig0020872:24720-24739 None:intergenic 50.0%
! TTTCTGGTGAGGAAATGCGG+AGG + tig0020872:24745-24764 None:intergenic 50.0%
!! GAATTGGGTGGTTTCTGGTG+AGG + tig0020872:24756-24775 None:intergenic 50.0%
! TTTGGGGCGGTAGGAGAATT+GGG + tig0020872:24771-24790 None:intergenic 50.0%
CAGCAACGACGGTGAATTTG+CGG + tig0020872:24808-24827 None:intergenic 50.0%
GCAACCAGCCCAAAAATCGA+TGG - tig0020872:24830-24849 Msa1386820:three_prime_UTR 50.0%
GACAACTGCAAACCATGTGG+AGG - tig0020872:24959-24978 Msa1386820:three_prime_UTR 50.0%
ACCAACCATGCAGAGAGGAA+TGG + tig0020872:24987-25006 None:intergenic 50.0%
AACTCACCAACCATGCAGAG+AGG + tig0020872:24992-25011 None:intergenic 50.0%
TATTGGTATGGTGAGGCGTG+AGG - tig0020872:25117-25136 Msa1386820:CDS 50.0%
GGATCTTGCGGAGATGTATG+TGG - tig0020872:26040-26059 Msa1386820:intron 50.0%
ACCGGAACTGTGACACACAA+GGG - tig0020872:26128-26147 Msa1386820:intron 50.0%
TCCCTTGTGTGTCACAGTTC+CGG + tig0020872:26132-26151 None:intergenic 50.0%
AGCAACAAGGAAAAGAGCCG+AGG - tig0020872:26172-26191 Msa1386820:intron 50.0%
AGAGCCGAGGACAAGATCTT+AGG - tig0020872:26185-26204 Msa1386820:intron 50.0%
GAGCCGAGGACAAGATCTTA+GGG - tig0020872:26186-26205 Msa1386820:intron 50.0%
AGCCGAGGACAAGATCTTAG+GGG - tig0020872:26187-26206 Msa1386820:intron 50.0%
GGCCTTGGATGTTCTGGTAT+AGG + tig0020872:26239-26258 None:intergenic 50.0%
CAAGGCCACGAAGATTGTCA+GGG - tig0020872:26252-26271 Msa1386820:intron 50.0%
GGCTACGTGACCAAATGTTC+TGG - tig0020872:26302-26321 Msa1386820:intron 50.0%
AGAGGCAATTGTGCAGGGTT+CGG - tig0020872:26367-26386 Msa1386820:CDS 50.0%
GGGAAGAGGATGGTTGAAGA+AGG - tig0020872:26395-26414 Msa1386820:CDS 50.0%
CTGTACAAGACTGTTGTGCC+TGG - tig0020872:26581-26600 Msa1386820:CDS 50.0%
! ATATCCTCCAATGGACTCCC+AGG + tig0020872:26602-26621 None:intergenic 50.0%
ACACCATTGGGAGCTTGGTT+AGG - tig0020872:26636-26655 Msa1386820:CDS 50.0%
CACCATTGGGAGCTTGGTTA+GGG - tig0020872:26637-26656 Msa1386820:CDS 50.0%
ACTGGTGATTGGAGCATAGC+AGG - tig0020872:26848-26867 Msa1386820:CDS 50.0%
CTGGTGATTGGAGCATAGCA+GGG - tig0020872:26849-26868 Msa1386820:CDS 50.0%
GGGAGTTTATGGCCGTTGGA+TGG + tig0020872:24595-24614 None:intergenic 55.0%
GTGAGGGAGTGAGGAATGAG+GGG + tig0020872:24675-24694 None:intergenic 55.0%
TGAGGGAAAGTGAGGGAGTG+AGG + tig0020872:24684-24703 None:intergenic 55.0%
GAGGCCGAGGAAGGATTTGA+GGG + tig0020872:24726-24745 None:intergenic 55.0%
! GTTTGGGGCGGTAGGAGAAT+TGG + tig0020872:24772-24791 None:intergenic 55.0%
AATTTGCGGCGGTGGGAGAT+GGG + tig0020872:24794-24813 None:intergenic 55.0%
CAACGACGGTGAATTTGCGG+CGG + tig0020872:24805-24824 None:intergenic 55.0%
!!! ACGGCCATCGATTTTTGGGC+TGG + tig0020872:24837-24856 None:intergenic 55.0%
TGACAGCGACACGGAGGTTA+CGG + tig0020872:24856-24875 None:intergenic 55.0%
! AACCTCCGTGTCGCTGTCAT+CGG - tig0020872:24857-24876 Msa1386820:three_prime_UTR 55.0%
AGAGGAATGGCTCCTCCACA+TGG + tig0020872:24974-24993 None:intergenic 55.0%
AGGAGCCATTCCTCTCTGCA+TGG - tig0020872:24979-24998 Msa1386820:three_prime_UTR 55.0%
GCCATTCCTCTCTGCATGGT+TGG - tig0020872:24983-25002 Msa1386820:three_prime_UTR 55.0%
CGGCGGTCAATGATGTCTAG+TGG + tig0020872:25022-25041 None:intergenic 55.0%
ATGTCGACGGCGACATTCGA+CGG + tig0020872:25070-25089 None:intergenic 55.0%
TCGAATGTCGCCGTCGACAT+TGG - tig0020872:25070-25089 Msa1386820:CDS 55.0%
ATGTCGCCGTCGACATTGGT+AGG - tig0020872:25074-25093 Msa1386820:CDS 55.0%
GATGGGAAAACTGGTGGGGT+TGG - tig0020872:25265-25284 Msa1386820:CDS 55.0%
CACCGGAACTGTGACACACA+AGG - tig0020872:26127-26146 Msa1386820:intron 55.0%
GCCGAGGACAAGATCTTAGG+GGG - tig0020872:26188-26207 Msa1386820:intron 55.0%
GCCCCCTAAGATCTTGTCCT+CGG + tig0020872:26192-26211 None:intergenic 55.0%
AGGGGGCAAGATTATCCGTG+TGG - tig0020872:26205-26224 Msa1386820:intron 55.0%
GGGCAAGATTATCCGTGTGG+AGG - tig0020872:26208-26227 Msa1386820:intron 55.0%
GTATAGGGTGAGCCTCCACA+CGG + tig0020872:26223-26242 None:intergenic 55.0%
! CTTCGTGGCCTTGGATGTTC+TGG + tig0020872:26245-26264 None:intergenic 55.0%
CCTGACAATCTTCGTGGCCT+TGG + tig0020872:26254-26273 None:intergenic 55.0%
CCAAGGCCACGAAGATTGTC+AGG - tig0020872:26251-26270 Msa1386820:intron 55.0%
GCCACGAAGATTGTCAGGGA+GGG - tig0020872:26256-26275 Msa1386820:intron 55.0%
ACCCTCCCTGACAATCTTCG+TGG + tig0020872:26260-26279 None:intergenic 55.0%
ATTTCGCAGCCAAGAGTGGG+AGG - tig0020872:26336-26355 Msa1386820:intron 55.0%
TGCGCAGAGGCAATTGTGCA+GGG - tig0020872:26362-26381 Msa1386820:CDS 55.0%
ATTGTGCAGGGTTCGGCGAA+TGG - tig0020872:26374-26393 Msa1386820:CDS 55.0%
TTGTGCAGGGTTCGGCGAAT+GGG - tig0020872:26375-26394 Msa1386820:CDS 55.0%
TTCGGCGAATGGGAAGAGGA+TGG - tig0020872:26385-26404 Msa1386820:CDS 55.0%
TGTTGTGCCTGGGAGTCCAT+TGG - tig0020872:26592-26611 Msa1386820:CDS 55.0%
AGCCCTAACCAAGCTCCCAA+TGG + tig0020872:26642-26661 None:intergenic 55.0%
TGGCCGTTGGATGGATGCGA+TGG + tig0020872:24586-24605 None:intergenic 60.0%
GGAGGCCGAGGAAGGATTTG+AGG + tig0020872:24727-24746 None:intergenic 60.0%
GAATTTGCGGCGGTGGGAGA+TGG + tig0020872:24795-24814 None:intergenic 60.0%
GACGGTGAATTTGCGGCGGT+GGG + tig0020872:24801-24820 None:intergenic 60.0%
GCTGGTTGCTGCAGCAACGA+CGG + tig0020872:24819-24838 None:intergenic 60.0%
GACCATGTTGCTGTCGGCAC+CGG - tig0020872:26110-26129 Msa1386820:intron 60.0%
!! TTCCGGTGCCGACAGCAACA+TGG + tig0020872:26115-26134 None:intergenic 60.0%
GGCCACGAAGATTGTCAGGG+AGG - tig0020872:26255-26274 Msa1386820:intron 60.0%
TGCGCACATCCTCCCACTCT+TGG + tig0020872:26348-26367 None:intergenic 60.0%
GTGCGCAGAGGCAATTGTGC+AGG - tig0020872:26361-26380 Msa1386820:CDS 60.0%
AGGGTTCGGCGAATGGGAAG+AGG - tig0020872:26381-26400 Msa1386820:CDS 60.0%
TGTGCCTGGGAGTCCATTGG+AGG - tig0020872:26595-26614 Msa1386820:CDS 60.0%
GGAAATGCGGAGGCCGAGGA+AGG + tig0020872:24735-24754 None:intergenic 65.0%
GTGAGGAAATGCGGAGGCCG+AGG + tig0020872:24739-24758 None:intergenic 65.0%
GGGGCGGTAGGAGAATTGGG+TGG + tig0020872:24768-24787 None:intergenic 65.0%
! GGAGATGGGTTTGGGGCGGT+AGG + tig0020872:24780-24799 None:intergenic 65.0%
! GGTGGGAGATGGGTTTGGGG+CGG + tig0020872:24784-24803 None:intergenic 65.0%
! GGCGGTGGGAGATGGGTTTG+GGG + tig0020872:24787-24806 None:intergenic 65.0%
! CGGCGGTGGGAGATGGGTTT+GGG + tig0020872:24788-24807 None:intergenic 65.0%
CGACGGTGAATTTGCGGCGG+TGG + tig0020872:24802-24821 None:intergenic 65.0%
! CTCCGTGTCGCTGTCATCGG+CGG - tig0020872:24860-24879 Msa1386820:three_prime_UTR 65.0%
CACCGCCGATGACAGCGACA+CGG + tig0020872:24865-24884 None:intergenic 65.0%
TCTGCTGCTGCACCACCTGC+TGG + tig0020872:24890-24909 None:intergenic 65.0%
TCAGGGAGGGTCGCGCTTGT+GGG - tig0020872:26269-26288 Msa1386820:intron 65.0%
GCGCTTGTGGGTGATGCTGC+TGG - tig0020872:26281-26300 Msa1386820:intron 65.0%
GAGTGGGAGGATGTGCGCAG+AGG - tig0020872:26349-26368 Msa1386820:CDS 65.0%
! GCGGCGGTGGGAGATGGGTT+TGG + tig0020872:24789-24808 None:intergenic 70.0%
CGCCGATGACAGCGACACGG+AGG + tig0020872:24862-24881 None:intergenic 70.0%
! CGTGTCGCTGTCATCGGCGG+TGG - tig0020872:24863-24882 Msa1386820:three_prime_UTR 70.0%
GTCATCGGCGGTGGTCCAGC+AGG - tig0020872:24872-24891 Msa1386820:three_prime_UTR 70.0%
ATCGGCGGTGGTCCAGCAGG+TGG - tig0020872:24875-24894 Msa1386820:three_prime_UTR 70.0%
GTCAGGGAGGGTCGCGCTTG+TGG - tig0020872:26268-26287 Msa1386820:intron 70.0%
Chromosome Type Strat End Strand Name
tig0020872 gene 24548 27186 24548 ID=Msa1386820;Name=Msa1386820
tig0020872 mRNA 24548 27186 24548 ID=Msa1386820-mRNA-1;Parent=Msa1386820;Name=Msa1386820-mRNA-1;_AED=0.00;_eAED=0.00;_QI=162|1|1|1|1|1|2|486|462
tig0020872 exon 24548 25735 24548 ID=Msa1386820-mRNA-1:exon:10386;Parent=Msa1386820-mRNA-1
tig0020872 exon 26338 27186 26338 ID=Msa1386820-mRNA-1:exon:10385;Parent=Msa1386820-mRNA-1
tig0020872 five_prime_UTR 27025 27186 27025 ID=Msa1386820-mRNA-1:five_prime_utr;Parent=Msa1386820-mRNA-1
tig0020872 CDS 26338 27024 26338 ID=Msa1386820-mRNA-1:cds;Parent=Msa1386820-mRNA-1
tig0020872 CDS 25034 25735 25034 ID=Msa1386820-mRNA-1:cds;Parent=Msa1386820-mRNA-1
tig0020872 three_prime_UTR 24548 25033 24548 ID=Msa1386820-mRNA-1:three_prime_utr;Parent=Msa1386820-mRNA-1
Gene Sequence

>Msa1386820

ATGAGCTCCATTGCCCTCAAATCCTTCCTCGGCCTCCGCATTTCCTCACCAGAAACCACCCAATTCTCCTACCGCCCCAAACCCATCTCCCACCGCCGCAAATTCACCGTCGTTGCTGCAGCAACCAGCCCAAAAATCGATGGCCGTAACCTCCGTGTCGCTGTCATCGGCGGTGGTCCAGCAGGTGGTGCAGCAGCAGAAACACTAGCAAAAGGTGGAATAGAAACCTTCCTCATCGAACGTAAAATGGACAACTGCAAACCATGTGGAGGAGCCATTCCTCTCTGCATGGTTGGTGAGTTCGACCTTCCACTAGACATCATTGACCGCCGTGTTACCAAGATGAAGATGATTTCTCCGTCGAATGTCGCCGTCGACATTGGTAGGACACTTAAGTCTCATGAGTATATTGGTATGGTGAGGCGTGAGGTGCTTGATGATTATCTTAGAAATAGGGCTAAGGAAAATGGAGCGAATATTATCAATGGGTTGTTTTTGAAAATGGATATTCCTAAACAAAAGAATGCGCCTTATGTTCTTCATTATTCTTCTTATGATGGGAAAACTGGTGGGGTTGGTGAAAAAACTACTTTGGAAGTTGATGCTGTTATTGGTGCTGATGGAGCTAATTCTAGAGTTGCTAAGTCTATTGATGCTGGTGATTATGAATATGCTATTGCATTTCAGGAGAGGATAAAAATCCCGGATGACAAAATGACTTATTACGAGGATCTTGCGGAGATGTATGTGGGTGACGACGTTTCTCCTGACTTCTATGGTTGGGTGTTCCCAAAATGTGACCATGTTGCTGTCGGCACCGGAACTGTGACACACAAGGGAGACATCAAGAAATTCCAACTAGCAACAAGGAAAAGAGCCGAGGACAAGATCTTAGGGGGCAAGATTATCCGTGTGGAGGCTCACCCTATACCAGAACATCCAAGGCCACGAAGATTGTCAGGGAGGGTCGCGCTTGTGGGTGATGCTGCTGGCTACGTGACCAAATGTTCTGGAGAAGGAATCTATTTCGCAGCCAAGAGTGGGAGGATGTGCGCAGAGGCAATTGTGCAGGGTTCGGCGAATGGGAAGAGGATGGTTGAAGAAGGGGATTTGAGGAAATATTTGGAGAAATGGGACAAGACATATTGGCCTACTTATAAGGTTTTGGATATTCTTCAGAAGGTGTTTTACAGGTCCAATCCTGCTAGGGAAGCTTTTGTTGAAATGTGTGCTGATGAATATGTGCAGAAGATGACATTTGATAGTTATCTGTACAAGACTGTTGTGCCTGGGAGTCCATTGGAGGATATCAAGTTGGCTATCAACACCATTGGGAGCTTGGTTAGGGCTAATGCTCTAAGGAGGGAGATGGACAAACTTAATGTATGA

Protein sequence

>Msa1386820

MSSIALKSFLGLRISSPETTQFSYRPKPISHRRKFTVVAAATSPKIDGRNLRVAVIGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKSHEYIGMVRREVLDDYLRNRAKENGANIINGLFLKMDIPKQKNAPYVLHYSSYDGKTGGVGEKTTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVQGSANGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGSPLEDIKLAINTIGSLVRANALRREMDKLNV*