Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677650 | XP_013455592.1 | 87.582 | 306 | 0 | 1 | 1 | 268 | 1 | 306 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677650 | sp|Q8H5X5|SCAM1_ORYSJ | 63.072 | 306 | 70 | 4 | 3 | 268 | 4 | 306 | 6.28e-135 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677650 | A0A072UKK0 | 87.582 | 306 | 0 | 1 | 1 | 268 | 1 | 306 | 0.0 | 535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074320 | Msa0677650 | 0.832691 | 8.181641e-56 | -8.615850e-47 |
| Msa0608320 | Msa0677650 | 0.831116 | 2.003485e-55 | -8.615850e-47 |
| Msa0677650 | Msa0709780 | 0.814865 | 1.239300e-51 | -8.615850e-47 |
| Msa0677650 | Msa0738040 | 0.811373 | 7.233947e-51 | -8.615850e-47 |
| Msa0677650 | Msa0766740 | 0.813735 | 2.201798e-51 | -8.615850e-47 |
| Msa0677650 | Msa1037640 | 0.804272 | 2.339412e-49 | -8.615850e-47 |
| Msa0677650 | Msa1119070 | 0.806366 | 8.518564e-50 | -8.615850e-47 |
| Msa0677650 | Msa1124110 | 0.819488 | 1.131258e-52 | -8.615850e-47 |
| Msa0677650 | Msa1168950 | 0.809475 | 1.857579e-50 | -8.615850e-47 |
| Msa0677650 | Msa1169040 | 0.814719 | 1.335208e-51 | -8.615850e-47 |
| Msa0677650 | Msa1225700 | 0.804593 | 2.005483e-49 | -8.615850e-47 |
| Msa0677650 | Msa1292830 | 0.817787 | 2.751248e-52 | -8.615850e-47 |
| Msa0134180 | Msa0677650 | 0.811155 | 8.066129e-51 | -8.615850e-47 |
| Msa0187690 | Msa0677650 | 0.842495 | 2.498093e-58 | -8.615850e-47 |
| Msa0434920 | Msa0677650 | 0.834055 | 3.738601e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677650 | MtrunA17_Chr4g0022441 | 87.582 | 306 | 0 | 1 | 1 | 268 | 1 | 306 | 0.0 | 535 |
| Msa0677650 | MtrunA17_Chr4g0047981 | 62.258 | 310 | 71 | 4 | 3 | 268 | 4 | 311 | 3.97e-126 | 361 |
| Msa0677650 | MtrunA17_Chr2g0281411 | 56.376 | 298 | 65 | 5 | 3 | 258 | 4 | 278 | 3.87e-111 | 322 |
| Msa0677650 | MtrunA17_Chr5g0409961 | 48.611 | 288 | 85 | 7 | 1 | 248 | 1 | 265 | 1.12e-88 | 264 |
| Msa0677650 | MtrunA17_Chr2g0323931 | 74.490 | 98 | 22 | 2 | 1 | 97 | 3 | 98 | 6.35e-45 | 147 |
| Msa0677650 | MtrunA17_Chr2g0323921 | 51.111 | 135 | 29 | 1 | 171 | 268 | 66 | 200 | 3.43e-37 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677650 | AT2G20840.1 | 63.072 | 306 | 51 | 3 | 1 | 268 | 1 | 282 | 2.12e-122 | 350 |
| Msa0677650 | AT1G03550.1 | 57.655 | 307 | 67 | 4 | 1 | 268 | 1 | 283 | 6.90e-121 | 347 |
| Msa0677650 | AT1G61250.1 | 57.282 | 309 | 68 | 5 | 2 | 268 | 3 | 289 | 2.10e-120 | 346 |
| Msa0677650 | AT1G11180.1 | 55.949 | 311 | 69 | 6 | 3 | 268 | 4 | 291 | 1.88e-113 | 328 |
| Msa0677650 | AT1G11180.3 | 54.662 | 311 | 66 | 7 | 3 | 268 | 4 | 284 | 5.79e-107 | 311 |
| Msa0677650 | AT1G61250.2 | 56.140 | 285 | 61 | 5 | 2 | 244 | 3 | 265 | 5.21e-106 | 308 |
| Msa0677650 | AT2G20840.3 | 68.619 | 239 | 37 | 1 | 68 | 268 | 1 | 239 | 4.79e-105 | 305 |
| Msa0677650 | AT2G20840.2 | 68.619 | 239 | 37 | 1 | 68 | 268 | 1 | 239 | 4.79e-105 | 305 |
| Msa0677650 | AT1G03550.4 | 56.272 | 279 | 59 | 4 | 1 | 240 | 1 | 255 | 7.29e-105 | 305 |
| Msa0677650 | AT1G11180.2 | 52.469 | 324 | 66 | 7 | 3 | 268 | 4 | 297 | 1.93e-104 | 305 |
| Msa0677650 | AT1G03550.3 | 60.987 | 223 | 49 | 1 | 84 | 268 | 2 | 224 | 6.40e-95 | 279 |
| Msa0677650 | AT1G03550.5 | 66.502 | 203 | 43 | 3 | 1 | 202 | 1 | 179 | 8.90e-94 | 276 |
| Msa0677650 | AT1G03550.6 | 66.502 | 203 | 43 | 3 | 1 | 202 | 1 | 179 | 1.23e-93 | 275 |
| Msa0677650 | AT1G03550.7 | 66.502 | 203 | 43 | 3 | 1 | 202 | 1 | 179 | 3.37e-93 | 273 |
| Msa0677650 | AT1G32050.1 | 47.569 | 288 | 87 | 6 | 1 | 249 | 1 | 263 | 2.31e-87 | 261 |
| Msa0677650 | AT1G03550.2 | 60.476 | 210 | 45 | 1 | 97 | 268 | 15 | 224 | 5.94e-87 | 258 |
Find 96 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTGAACAGAGGTATTT+TGG | 0.188591 | 4_4:+32001688 | Msa0677650:intron |
| AACTGGAGAGATGAAAATTT+TGG | 0.196242 | 4_4:-32002171 | None:intergenic |
| AAGATATAAACAATATTCTA+TGG | 0.248482 | 4_4:-32002358 | None:intergenic |
| CTGCAGATATTCTACTTCAT+TGG | 0.278327 | 4_4:+32001881 | Msa0677650:intron |
| AAATGCACCTCCACCATAAC+TGG | 0.303917 | 4_4:-31996140 | None:intergenic |
| AAATGGTTCATTAATTCAAC+TGG | 0.304016 | 4_4:+32002388 | Msa0677650:three_prime_UTR |
| AGAATGCACACACTGGAAAA+AGG | 0.307804 | 4_4:-31994852 | None:intergenic |
| TCTTCTTCTTCGAAAGGGTT+TGG | 0.319797 | 4_4:-31994979 | None:intergenic |
| GCCGCAGAAGGAACACTTCC+AGG | 0.350666 | 4_4:-31997841 | None:intergenic |
| GCCTTGCAGGTCCAACCATC+TGG | 0.357373 | 4_4:+32000469 | Msa0677650:intron |
| TGCATCCTTTGAAGATGAAT+TGG | 0.361175 | 4_4:-31998692 | None:intergenic |
| CAGAGTGTAGTGTGCAGTTT+CGG | 0.368491 | 4_4:+31994771 | Msa0677650:five_prime_UTR |
| GTCAATCAAATGAAATGAAA+TGG | 0.370563 | 4_4:-31994749 | None:intergenic |
| TCGAGTCACTGATGAGCGTT+TGG | 0.372701 | 4_4:+32001921 | Msa0677650:CDS |
| AGGTGCAAGGAACTGGTAAC+TGG | 0.379867 | 4_4:-32002188 | None:intergenic |
| ATATTCTACTTCATTGGGTT+CGG | 0.385059 | 4_4:+32001887 | Msa0677650:CDS |
| TGCAGATATTCTACTTCATT+GGG | 0.398802 | 4_4:+32001882 | Msa0677650:intron |
| AAGCATATCTGTTGCTCTAA+AGG | 0.423006 | 4_4:-32002554 | None:intergenic |
| TGCAGCTGGCATAGTTATAG+AGG | 0.424119 | 4_4:+31998613 | Msa0677650:intron |
| GATGGAACAGCTAAAGGAAA+AGG | 0.427525 | 4_4:+31996106 | Msa0677650:CDS |
| TAGGCGGCAGTGCATTGGTT+GGG | 0.429522 | 4_4:+32001726 | Msa0677650:CDS |
| TCTTCAACCGATTGTTCAGC+TGG | 0.431366 | 4_4:+32002497 | Msa0677650:three_prime_UTR |
| CTGCAGCCTTGCCGCTTCCA+CGG | 0.443172 | 4_4:-32002065 | None:intergenic |
| CGAGTCACTGATGAGCGTTT+GGG | 0.444577 | 4_4:+32001922 | Msa0677650:CDS |
| CCCATCATTCATCATGACAT+TGG | 0.448111 | 4_4:+31998659 | Msa0677650:CDS |
| TTGGCTGCGATTGATGTGAT+AGG | 0.449005 | 4_4:+32001707 | Msa0677650:CDS |
| GGCTGCAGAGCTGAAGCGAG+AGG | 0.451567 | 4_4:+32002080 | Msa0677650:CDS |
| ATCTTTGAAGAAATCGAAAT+CGG | 0.453455 | 4_4:-31994923 | None:intergenic |
| GCGACAAAGGTGCAAGGAAC+TGG | 0.456135 | 4_4:-32002195 | None:intergenic |
| AGCTGCCATCATCGTTCCTC+TGG | 0.458339 | 4_4:-32002106 | None:intergenic |
| TATTAGGATGGAACAGCTAA+AGG | 0.470826 | 4_4:+31996100 | Msa0677650:intron |
| GTGTCTTCTGTGGAATATAG+TGG | 0.474611 | 4_4:+32000351 | Msa0677650:CDS |
| AGCCCTCCCAGCTGAACAAT+CGG | 0.484714 | 4_4:-32002504 | None:intergenic |
| GTTTGGTTCTGTGTCTTCTG+TGG | 0.487024 | 4_4:+32000341 | Msa0677650:CDS |
| AACCGATTGTTCAGCTGGGA+GGG | 0.490169 | 4_4:+32002502 | Msa0677650:three_prime_UTR |
| GGCAGCCAGAGGAACGATGA+TGG | 0.496139 | 4_4:+32002101 | Msa0677650:CDS |
| GTTACTACTGCTTGGATCAA+AGG | 0.497278 | 4_4:+32000376 | Msa0677650:CDS |
| ACAGTTGCATTACGATCATA+AGG | 0.502071 | 4_4:-31997892 | None:intergenic |
| TGAGTCTCTTCTTCTTCGAA+AGG | 0.503370 | 4_4:-31994985 | None:intergenic |
| AGGCGGCAGTGCATTGGTTG+GGG | 0.509637 | 4_4:+32001727 | Msa0677650:CDS |
| GAGTCTCTTCTTCTTCGAAA+GGG | 0.514541 | 4_4:-31994984 | None:intergenic |
| GATCATAAGGCTCATGAGGA+AGG | 0.517882 | 4_4:-31997879 | None:intergenic |
| ATGGAACAGCTAAAGGAAAA+GGG | 0.518660 | 4_4:+31996107 | Msa0677650:CDS |
| TCCAATGTCATGATGAATGA+TGG | 0.519135 | 4_4:-31998660 | None:intergenic |
| ATAGGCGGCAGTGCATTGGT+TGG | 0.521807 | 4_4:+32001725 | Msa0677650:CDS |
| GGGTCAGGACAATCCAGTTA+TGG | 0.523260 | 4_4:+31996127 | Msa0677650:CDS |
| AAACATCAAAGTATTAAGAA+AGG | 0.524260 | 4_4:-32002217 | None:intergenic |
| ATCATAAGGCTCATGAGGAA+GGG | 0.526859 | 4_4:-31997878 | None:intergenic |
| AAATACCAATTCATCTTCAA+AGG | 0.528962 | 4_4:+31998687 | Msa0677650:CDS |
| ACAGCTAAAGGAAAAGGGTC+AGG | 0.531076 | 4_4:+31996112 | Msa0677650:CDS |
| GCCCTCTTTATCGCGCTATG+AGG | 0.533215 | 4_4:+32000550 | Msa0677650:CDS |
| AACTAAAATACCTCGTGCAA+TGG | 0.534765 | 4_4:-31998526 | None:intergenic |
| AGATATAAACAATATTCTAT+GGG | 0.541031 | 4_4:-32002357 | None:intergenic |
| TAGTGGCTGTTACTACTGCT+TGG | 0.541222 | 4_4:+32000368 | Msa0677650:CDS |
| TTGATGTACTTCCGTGGAAG+CGG | 0.546165 | 4_4:+32002054 | Msa0677650:CDS |
| TACCTCATAGCGCGATAAAG+AGG | 0.546976 | 4_4:-32000552 | None:intergenic |
| CAACCGATTGTTCAGCTGGG+AGG | 0.552814 | 4_4:+32002501 | Msa0677650:three_prime_UTR |
| TGTGATAGGCGGCAGTGCAT+TGG | 0.553996 | 4_4:+32001721 | Msa0677650:CDS |
| GGTTATAGGATTGGAATCTA+CGG | 0.557016 | 4_4:-31994829 | None:intergenic |
| TACCACATCACATAGGATGC+TGG | 0.559189 | 4_4:-32000525 | None:intergenic |
| ATAGCAAGAAACCAGATGGT+TGG | 0.566913 | 4_4:-32000480 | None:intergenic |
| CCAATGTCATGATGAATGAT+GGG | 0.567184 | 4_4:-31998659 | None:intergenic |
| TCAACCCTAGACCAGAAGCC+AGG | 0.569643 | 4_4:-32002243 | None:intergenic |
| GAGAGTCTTGAGGCCGCAGA+AGG | 0.571279 | 4_4:-31997853 | None:intergenic |
| TGTTTGAATTTGCAGAACCC+TGG | 0.575017 | 4_4:+31997823 | Msa0677650:intron |
| TGGGAAACGTTAAGTGTCAA+AGG | 0.575873 | 4_4:-32002338 | None:intergenic |
| AGTATTAAGAAAGGCGACAA+AGG | 0.583965 | 4_4:-32002208 | None:intergenic |
| TCATAAGGCTCATGAGGAAG+GGG | 0.584049 | 4_4:-31997877 | None:intergenic |
| TATAATAGCAAGAAACCAGA+TGG | 0.595629 | 4_4:-32000484 | None:intergenic |
| GGATGTCAAAGCAAAGGAGA+AGG | 0.595717 | 4_4:+31998037 | Msa0677650:intron |
| CATCCCTCTTGATAGCTCAA+AGG | 0.596061 | 4_4:+31997918 | Msa0677650:CDS |
| CCCTGGAAGTGTTCCTTCTG+CGG | 0.597687 | 4_4:+31997840 | Msa0677650:CDS |
| ATGATGGCAGCTCTATGACT+TGG | 0.599721 | 4_4:+32002117 | Msa0677650:exon |
| CTTCAACCGATTGTTCAGCT+GGG | 0.605129 | 4_4:+32002498 | Msa0677650:three_prime_UTR |
| GGACAATCCAGTTATGGTGG+AGG | 0.605506 | 4_4:+31996133 | Msa0677650:CDS |
| GTAGGAACTAAAACGAAGAG+AGG | 0.606178 | 4_4:+31998500 | Msa0677650:intron |
| CCGCAGAAGGAACACTTCCA+GGG | 0.608363 | 4_4:-31997840 | None:intergenic |
| TCAGGACAATCCAGTTATGG+TGG | 0.612415 | 4_4:+31996130 | Msa0677650:CDS |
| ACTGCTTGGATCAAAGGAGA+AGG | 0.615186 | 4_4:+32000382 | Msa0677650:CDS |
| TTCCAGCATCCTATGTGATG+TGG | 0.617133 | 4_4:+32000523 | Msa0677650:CDS |
| ACCTCATAGCGCGATAAAGA+GGG | 0.619016 | 4_4:-32000551 | None:intergenic |
| AATGGTTCATTAATTCAACT+GGG | 0.620131 | 4_4:+32002389 | Msa0677650:three_prime_UTR |
| CTGAAGCGAGAGGCAGCCAG+AGG | 0.623436 | 4_4:+32002090 | Msa0677650:CDS |
| GTACTTCCGTGGAAGCGGCA+AGG | 0.623953 | 4_4:+32002059 | Msa0677650:CDS |
| TTACGATCATAAGGCTCATG+AGG | 0.634112 | 4_4:-31997883 | None:intergenic |
| CAAGTATTGATGTACTTCCG+TGG | 0.636251 | 4_4:+32002048 | Msa0677650:CDS |
| TCTACCTTTGAGCTATCAAG+AGG | 0.643446 | 4_4:-31997922 | None:intergenic |
| AGAAAGGCGACAAAGGTGCA+AGG | 0.648219 | 4_4:-32002201 | None:intergenic |
| AGGAAGGGGTGAGAGTCTTG+AGG | 0.659297 | 4_4:-31997863 | None:intergenic |
| AGAGAGGATGCCATTGCACG+AGG | 0.664141 | 4_4:+31998516 | Msa0677650:CDS |
| AGGGCGATACCACATCACAT+AGG | 0.671025 | 4_4:-32000532 | None:intergenic |
| GCAGTGTAGAATGCACACAC+TGG | 0.675253 | 4_4:-31994859 | None:intergenic |
| CAATGTCATGATGAATGATG+GGG | 0.687547 | 4_4:-31998658 | None:intergenic |
| CTACCTTTGAGCTATCAAGA+GGG | 0.689287 | 4_4:-31997921 | None:intergenic |
| GCTGCGATTGATGTGATAGG+CGG | 0.692901 | 4_4:+32001710 | Msa0677650:CDS |
| ATTAAAGAAAGAACTCACAG+CGG | 0.779522 | 4_4:+32002279 | Msa0677650:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCCAAAATTTAAAATTATT+AGG | - | chr4_4:31995217-31995236 | None:intergenic | 10.0% |
| !!! | AAATCATTTTATTTTTATGA+TGG | + | chr4_4:31997507-31997526 | Msa0677650:intron | 10.0% |
| !! | AATTATTGTAAAAAATACAA+GGG | + | chr4_4:31997698-31997717 | Msa0677650:intron | 10.0% |
| !!! | TTAATTATGTTCTTAATTTT+AGG | + | chr4_4:31998016-31998035 | Msa0677650:intron | 10.0% |
| !! | TTAACAAAATGAAAATATAA+AGG | + | chr4_4:31998906-31998925 | Msa0677650:intron | 10.0% |
| !!! | TTTATATCTTTTATAACAAA+TGG | + | chr4_4:32002371-32002390 | Msa0677650:three_prime_UTR | 10.0% |
| !!! | GACCTAATAATTTTAAATTT+TGG | + | chr4_4:31995212-31995231 | Msa0677650:intron | 15.0% |
| !! | ATGAGTATTTCTTAAAATTT+CGG | - | chr4_4:31995753-31995772 | None:intergenic | 15.0% |
| !!! | CAATATCTATATATTGATTA+AGG | - | chr4_4:31995868-31995887 | None:intergenic | 15.0% |
| !!! | TTTTATGTAAACATATATCT+TGG | - | chr4_4:31996201-31996220 | None:intergenic | 15.0% |
| !!! | ATATTGATTTCATAATAAGT+AGG | + | chr4_4:31997377-31997396 | Msa0677650:intron | 15.0% |
| !!! | TATTGATTTCATAATAAGTA+GGG | + | chr4_4:31997378-31997397 | Msa0677650:intron | 15.0% |
| !! | CAATTATTGTAAAAAATACA+AGG | + | chr4_4:31997697-31997716 | Msa0677650:intron | 15.0% |
| !! | ATTATTGTAAAAAATACAAG+GGG | + | chr4_4:31997699-31997718 | Msa0677650:intron | 15.0% |
| !! | TAAGAACATAATTAAATCTT+GGG | - | chr4_4:31998011-31998030 | None:intergenic | 15.0% |
| !! | TTAAGAACATAATTAAATCT+TGG | - | chr4_4:31998012-31998031 | None:intergenic | 15.0% |
| !!! | TTTTACTACTGATTAATATT+AGG | + | chr4_4:31998217-31998236 | Msa0677650:intron | 15.0% |
| !!! | TTTACTACTGATTAATATTA+GGG | + | chr4_4:31998218-31998237 | Msa0677650:intron | 15.0% |
| !!! | AATATAGAAATTGTTTTTGT+TGG | - | chr4_4:31998570-31998589 | None:intergenic | 15.0% |
| !!! | CAAAAACAATTTCTATATTT+TGG | + | chr4_4:31998571-31998590 | Msa0677650:intron | 15.0% |
| !! | TAGTTGAATTATAATTCATA+TGG | + | chr4_4:31998868-31998887 | Msa0677650:intron | 15.0% |
| !!! | ATTTTTAAATACTAGAGTTT+GGG | - | chr4_4:31999088-31999107 | None:intergenic | 15.0% |
| !! | ACTCTAGTATTTAAAAATAA+TGG | + | chr4_4:31999310-31999329 | Msa0677650:intron | 15.0% |
| !! | CTCTAGTATTTAAAAATAAT+GGG | + | chr4_4:31999311-31999330 | Msa0677650:intron | 15.0% |
| !! | ACTATTAATGTCAATAATAT+AGG | - | chr4_4:32000179-32000198 | None:intergenic | 15.0% |
| !!! | TTTTAAAACTTAGATACTAT+TGG | - | chr4_4:32000303-32000322 | None:intergenic | 15.0% |
| !!! | GCTATTATATATTTTATTTC+TGG | + | chr4_4:32000498-32000517 | Msa0677650:CDS | 15.0% |
| !!! | CAATTTTTACATATACTTTA+AGG | - | chr4_4:32000658-32000677 | None:intergenic | 15.0% |
| !! | TAATTTATCTAAATCTTAAC+CGG | - | chr4_4:32000695-32000714 | None:intergenic | 15.0% |
| !! | GTTAAGATTTAGATAAATTA+TGG | + | chr4_4:32000695-32000714 | Msa0677650:intron | 15.0% |
| !! | AGATATAAACAATATTCTAT+GGG | - | chr4_4:32002360-32002379 | None:intergenic | 15.0% |
| !! | AAGATATAAACAATATTCTA+TGG | - | chr4_4:32002361-32002380 | None:intergenic | 15.0% |
| !! | ATTATTGAGAATGAATTATG+CGG | - | chr4_4:31995054-31995073 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTTTTAG+CGG | + | chr4_4:31995565-31995584 | Msa0677650:intron | 20.0% |
| !!! | GCATTTGATCTTTAAATTTT+TGG | + | chr4_4:31995915-31995934 | Msa0677650:intron | 20.0% |
| !!! | AACAAAAATGCTTAATGTTT+TGG | - | chr4_4:31996075-31996094 | None:intergenic | 20.0% |
| !!! | GCATTTTTGTTGATAATATT+AGG | + | chr4_4:31996084-31996103 | Msa0677650:intron | 20.0% |
| !!! | TTTTGTTGATAATATTAGGA+TGG | + | chr4_4:31996088-31996107 | Msa0677650:intron | 20.0% |
| !! | GAGATTTATATATACTTGAT+AGG | + | chr4_4:31996389-31996408 | Msa0677650:intron | 20.0% |
| !! | TTTATATATACTTGATAGGT+TGG | + | chr4_4:31996393-31996412 | Msa0677650:intron | 20.0% |
| !! | TTATATATACTTGATAGGTT+GGG | + | chr4_4:31996394-31996413 | Msa0677650:intron | 20.0% |
| !!! | ATTTTTCCCTTTTTAATCAA+CGG | + | chr4_4:31996421-31996440 | Msa0677650:intron | 20.0% |
| !!! | TAGTTTTTGTATTTACATGT+TGG | + | chr4_4:31996494-31996513 | Msa0677650:intron | 20.0% |
| !! | AATTGTAGTAGACTTATATA+TGG | + | chr4_4:31996670-31996689 | Msa0677650:intron | 20.0% |
| !!! | TGATGGTTTTTCTATTTTAT+TGG | + | chr4_4:31997524-31997543 | Msa0677650:intron | 20.0% |
| !! | TTATTGTAAAAAATACAAGG+GGG | + | chr4_4:31997700-31997719 | Msa0677650:intron | 20.0% |
| !! | AGTTATAAACTACAGTAATT+TGG | + | chr4_4:31997724-31997743 | Msa0677650:intron | 20.0% |
| !! | TTACATTTCATGTTTGAAAA+GGG | - | chr4_4:31997767-31997786 | None:intergenic | 20.0% |
| !! | TTTACATTTCATGTTTGAAA+AGG | - | chr4_4:31997768-31997787 | None:intergenic | 20.0% |
| !! | AAGAACATAATTAAATCTTG+GGG | - | chr4_4:31998010-31998029 | None:intergenic | 20.0% |
| !! | ATGCTAATTCATTAAAAAGA+AGG | - | chr4_4:31998299-31998318 | None:intergenic | 20.0% |
| !! | AATGAATTAGCATTAGTATA+TGG | + | chr4_4:31998306-31998325 | Msa0677650:intron | 20.0% |
| !! | TTGAATTATAATTCATATGG+AGG | + | chr4_4:31998871-31998890 | Msa0677650:intron | 20.0% |
| !!! | CATTTTTAAATACTAGAGTT+TGG | - | chr4_4:31999089-31999108 | None:intergenic | 20.0% |
| !! | ACTCTAGTATTTAAAAATGA+TGG | + | chr4_4:31999090-31999109 | Msa0677650:intron | 20.0% |
| !! | CTCTAGTATTTAAAAATGAT+GGG | + | chr4_4:31999091-31999110 | Msa0677650:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr4_4:31999868-31999887 | Msa0677650:intron | 20.0% |
| !!! | ATTCTTAATTTTAACAGTAG+TGG | + | chr4_4:31999991-32000010 | Msa0677650:intron | 20.0% |
| !! | ATTATTGACATTAATAGTGT+CGG | + | chr4_4:32000181-32000200 | Msa0677650:intron | 20.0% |
| !!! | AATTGATAATCTATATCTTC+CGG | + | chr4_4:32000673-32000692 | Msa0677650:intron | 20.0% |
| !!! | GGCTTTTAATGATTTTTTTT+TGG | + | chr4_4:32001038-32001057 | Msa0677650:intron | 20.0% |
| !! | ACATATAATGCAATATTAGA+AGG | - | chr4_4:32001322-32001341 | None:intergenic | 20.0% |
| !!! | AAACATCAAAGTATTAAGAA+AGG | - | chr4_4:32002220-32002239 | None:intergenic | 20.0% |
| !! | TTTTTCGCTTTCTGATTTTT+TGG | - | chr4_4:31994808-31994827 | None:intergenic | 25.0% |
| !! | ATCTTTGAAGAAATCGAAAT+CGG | - | chr4_4:31994926-31994945 | None:intergenic | 25.0% |
| ! | ATCAGCATTTCAAAATTGAA+TGG | - | chr4_4:31995102-31995121 | None:intergenic | 25.0% |
| !!! | GGATAAGTTCATAATTTGTT+CGG | + | chr4_4:31995154-31995173 | Msa0677650:intron | 25.0% |
| !!! | TCTGATTTTGTTTTCTATAG+AGG | + | chr4_4:31995314-31995333 | Msa0677650:intron | 25.0% |
| ! | AGGAAATGTATTGTTAACAT+TGG | + | chr4_4:31995334-31995353 | Msa0677650:intron | 25.0% |
| ! | GACTTACCATCTTAAAATTA+GGG | - | chr4_4:31995470-31995489 | None:intergenic | 25.0% |
| ! | AGACTTACCATCTTAAAATT+AGG | - | chr4_4:31995471-31995490 | None:intergenic | 25.0% |
| ! | TTCATAGATCCAAAATCTAT+TGG | + | chr4_4:31995617-31995636 | Msa0677650:intron | 25.0% |
| ! | TATAGATATTGAAATCTCAC+AGG | + | chr4_4:31995877-31995896 | Msa0677650:intron | 25.0% |
| ! | TTTACATAAAACACTTTGCA+TGG | + | chr4_4:31996210-31996229 | Msa0677650:intron | 25.0% |
| ! | CTTGCACAATAAAAATATAG+AGG | - | chr4_4:31996287-31996306 | None:intergenic | 25.0% |
| !! | TATTGAAGTTCAGATTTTGT+AGG | + | chr4_4:31996342-31996361 | Msa0677650:intron | 25.0% |
| !! | TTAATGTTTTCTGATCATAG+TGG | + | chr4_4:31996642-31996661 | Msa0677650:intron | 25.0% |
| !! | CTTTTGTCAGAAATTATGAT+AGG | + | chr4_4:31996719-31996738 | Msa0677650:intron | 25.0% |
| !!! | TTTACTTTTTGAATGACAGA+TGG | + | chr4_4:31997074-31997093 | Msa0677650:intron | 25.0% |
| ! | ATAAAATGATTTCCACAAAC+TGG | - | chr4_4:31997499-31997518 | None:intergenic | 25.0% |
| ! | TCATAGTAAGCTTATAAACA+AGG | - | chr4_4:31997800-31997819 | None:intergenic | 25.0% |
| ! | AGAGTCTGAATTGAAAAAAA+GGG | + | chr4_4:31998073-31998092 | Msa0677650:CDS | 25.0% |
| ! | AAGATATCACGTAATAAATC+AGG | - | chr4_4:31998113-31998132 | None:intergenic | 25.0% |
| !!! | CATGTTAATGTTTTGATACA+TGG | + | chr4_4:31998265-31998284 | Msa0677650:intron | 25.0% |
| ! | TAAATGACAGTATATCACAA+TGG | - | chr4_4:31998444-31998463 | None:intergenic | 25.0% |
| !! | TACTGTCATTTAAAGTAGTA+AGG | + | chr4_4:31998452-31998471 | Msa0677650:intron | 25.0% |
| !! | TGTATCTCATGATATTTTGT+AGG | + | chr4_4:31998482-31998501 | Msa0677650:intron | 25.0% |
| ! | TAGTTATAGAGGAAAAAAAC+TGG | + | chr4_4:31998624-31998643 | Msa0677650:CDS | 25.0% |
| ! | AAATACCAATTCATCTTCAA+AGG | + | chr4_4:31998687-31998706 | Msa0677650:CDS | 25.0% |
| !! | AGTATATTGCATTTTCAACA+TGG | + | chr4_4:31998714-31998733 | Msa0677650:CDS | 25.0% |
| ! | ACAAAGTACAGATAATAATG+AGG | - | chr4_4:31998849-31998868 | None:intergenic | 25.0% |
| ! | TTGTTGCTCATATATGAAAA+TGG | - | chr4_4:31998931-31998950 | None:intergenic | 25.0% |
| ! | TTCAAACTAGACTAATACAT+GGG | - | chr4_4:31999518-31999537 | None:intergenic | 25.0% |
| ! | ATTCAAACTAGACTAATACA+TGG | - | chr4_4:31999519-31999538 | None:intergenic | 25.0% |
| !! | TATTACTGAAGTTTTACTTC+TGG | - | chr4_4:31999580-31999599 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr4_4:31999843-31999862 | None:intergenic | 25.0% |
| !!! | TTTTAACAGTAGTGGATATA+TGG | + | chr4_4:31999999-32000018 | Msa0677650:intron | 25.0% |
| ! | TTAAACAAGAACATCACTTA+TGG | - | chr4_4:32000125-32000144 | None:intergenic | 25.0% |
| ! | TGCTTGTAGAAATAGTAAAA+AGG | - | chr4_4:32001223-32001242 | None:intergenic | 25.0% |
| !!! | GATTTTCCTTTGAAGATAAT+TGG | - | chr4_4:32001286-32001305 | None:intergenic | 25.0% |
| ! | CTTTAACTGAATTGATATAC+TGG | + | chr4_4:32001378-32001397 | Msa0677650:intron | 25.0% |
| ! | TCCATAAACTATTAACTGAA+AGG | + | chr4_4:32001466-32001485 | Msa0677650:intron | 25.0% |
| ! | CCATAAACTATTAACTGAAA+GGG | + | chr4_4:32001467-32001486 | Msa0677650:intron | 25.0% |
| ! | AAGTACACGAAAATTATACA+TGG | - | chr4_4:32001513-32001532 | None:intergenic | 25.0% |
| ! | ACAATAATTTGATGCTTATC+AGG | - | chr4_4:32001544-32001563 | None:intergenic | 25.0% |
| ! | TCAAATTATTGTGTTGTGTT+AGG | + | chr4_4:32001552-32001571 | Msa0677650:intron | 25.0% |
| ! | CAAGATGATAAATACACAAT+TGG | - | chr4_4:32001759-32001778 | None:intergenic | 25.0% |
| ! | CAATTGTGTATTTATCATCT+TGG | + | chr4_4:32001757-32001776 | Msa0677650:intron | 25.0% |
| ! | ATCTTGGATAATTCAATAGT+TGG | + | chr4_4:32001773-32001792 | Msa0677650:intron | 25.0% |
| !!! | AATACTTTGATGTTTTTTCC+TGG | + | chr4_4:32002225-32002244 | Msa0677650:three_prime_UTR | 25.0% |
| ! | AAATGGTTCATTAATTCAAC+TGG | + | chr4_4:32002388-32002407 | Msa0677650:three_prime_UTR | 25.0% |
| ! | AATGGTTCATTAATTCAACT+GGG | + | chr4_4:32002389-32002408 | Msa0677650:three_prime_UTR | 25.0% |
| !!! | TTGAAGTTTTTTTACGCTTT+CGG | + | chr4_4:32002448-32002467 | Msa0677650:three_prime_UTR | 25.0% |
| GATGAATAATTGCGAATGTT+TGG | + | chr4_4:31995133-31995152 | Msa0677650:intron | 30.0% | |
| !! | TTCATAATTTGTTCGGTTAC+TGG | + | chr4_4:31995161-31995180 | Msa0677650:intron | 30.0% |
| !! | TGCTATTGATTTGATGTCAA+TGG | + | chr4_4:31995290-31995309 | Msa0677650:intron | 30.0% |
| ! | TCACTTGTAAACACATTTTC+AGG | - | chr4_4:31995392-31995411 | None:intergenic | 30.0% |
| TTCAGTGTAATTATGTGTGT+CGG | - | chr4_4:31995540-31995559 | None:intergenic | 30.0% | |
| TATTGGACCACATGTTATTA+GGG | + | chr4_4:31995634-31995653 | Msa0677650:intron | 30.0% | |
| TCTTGGTCAGTTAAAGAAAA+GGG | - | chr4_4:31996184-31996203 | None:intergenic | 30.0% | |
| ATCTTGGTCAGTTAAAGAAA+AGG | - | chr4_4:31996185-31996204 | None:intergenic | 30.0% | |
| GCATGGTAATATTATGACAA+AGG | + | chr4_4:31996227-31996246 | Msa0677650:intron | 30.0% | |
| TTATCCCTTTGTAATCAATC+AGG | + | chr4_4:31996367-31996386 | Msa0677650:intron | 30.0% | |
| ATCTCCTGATTGATTACAAA+GGG | - | chr4_4:31996374-31996393 | None:intergenic | 30.0% | |
| AATCTCCTGATTGATTACAA+AGG | - | chr4_4:31996375-31996394 | None:intergenic | 30.0% | |
| ! | AATCCACCGTTGATTAAAAA+GGG | - | chr4_4:31996430-31996449 | None:intergenic | 30.0% |
| ! | AAATCCACCGTTGATTAAAA+AGG | - | chr4_4:31996431-31996450 | None:intergenic | 30.0% |
| GTAGTAGACTTATATATGGA+AGG | + | chr4_4:31996674-31996693 | Msa0677650:intron | 30.0% | |
| AGATAAACTTTCATGCTGAA+CGG | + | chr4_4:31996858-31996877 | Msa0677650:intron | 30.0% | |
| ! | AGTTATTTCCATGAAACTGA+TGG | + | chr4_4:31996895-31996914 | Msa0677650:intron | 30.0% |
| ! | ATGGTTTTCTTTTAGTACCA+TGG | + | chr4_4:31996942-31996961 | Msa0677650:intron | 30.0% |
| !! | ATATACTCTTTCGAGTTCAT+GGG | - | chr4_4:31997152-31997171 | None:intergenic | 30.0% |
| TTTAGCTACTCAAAACCTTT+AGG | - | chr4_4:31997420-31997439 | None:intergenic | 30.0% | |
| !!! | GGTTTTGAGTAGCTAAATTT+TGG | + | chr4_4:31997423-31997442 | Msa0677650:intron | 30.0% |
| !! | TGATTTGCTGACTATATCAA+TGG | + | chr4_4:31997672-31997691 | Msa0677650:intron | 30.0% |
| ATTTCATGTTTGAAAAGGGA+AGG | - | chr4_4:31997763-31997782 | None:intergenic | 30.0% | |
| !!! | ATTTTAGGATGTCAAAGCAA+AGG | + | chr4_4:31998031-31998050 | Msa0677650:intron | 30.0% |
| GAGAGTCTGAATTGAAAAAA+AGG | + | chr4_4:31998072-31998091 | Msa0677650:CDS | 30.0% | |
| TGAATTGAAAAAAAGGGAAC+AGG | + | chr4_4:31998079-31998098 | Msa0677650:CDS | 30.0% | |
| TATCACGTAATAAATCAGGA+TGG | - | chr4_4:31998109-31998128 | None:intergenic | 30.0% | |
| ATTAATATTAGGGACCTAAC+TGG | + | chr4_4:31998228-31998247 | Msa0677650:intron | 30.0% | |
| TCATTAAAAAGAAGGACAAG+TGG | - | chr4_4:31998291-31998310 | None:intergenic | 30.0% | |
| TGAACTAAATCCTCAATAGA+AGG | - | chr4_4:31998343-31998362 | None:intergenic | 30.0% | |
| CATTATAATCCTGAAATGGA+AGG | - | chr4_4:31998384-31998403 | None:intergenic | 30.0% | |
| GTAGCATTATAATCCTGAAA+TGG | - | chr4_4:31998388-31998407 | None:intergenic | 30.0% | |
| ! | TGCCTTGCTATAAATTTACT+TGG | + | chr4_4:31998418-31998437 | Msa0677650:intron | 30.0% |
| ! | ATTGCATTTTCAACATGGTT+AGG | + | chr4_4:31998719-31998738 | Msa0677650:CDS | 30.0% |
| ! | TGTATAGTCTAGGATGTTTA+AGG | + | chr4_4:31998760-31998779 | Msa0677650:intron | 30.0% |
| ATTTCCAGATTCATATGTCA+TGG | - | chr4_4:31999395-31999414 | None:intergenic | 30.0% | |
| CACAATTTGGCAATAAAAGA+GGG | - | chr4_4:31999468-31999487 | None:intergenic | 30.0% | |
| TCACAATTTGGCAATAAAAG+AGG | - | chr4_4:31999469-31999488 | None:intergenic | 30.0% | |
| AAAACTTTGTAATAATCCGC+AGG | + | chr4_4:32000319-32000338 | Msa0677650:intron | 30.0% | |
| TATAATAGCAAGAAACCAGA+TGG | - | chr4_4:32000487-32000506 | None:intergenic | 30.0% | |
| !! | TACTTTAAGGCTAAACAAGT+AGG | - | chr4_4:32000645-32000664 | None:intergenic | 30.0% |
| ! | TAAAAGTAGTTTGTACACCT+GGG | + | chr4_4:32000735-32000754 | Msa0677650:intron | 30.0% |
| GTAATATTTGAGAAGCTAGT+AGG | + | chr4_4:32000801-32000820 | Msa0677650:intron | 30.0% | |
| !! | TTTTTCACAAGTTGGAAGAA+TGG | - | chr4_4:32000943-32000962 | None:intergenic | 30.0% |
| ! | TGACACGTTATTGCATTTTT+AGG | + | chr4_4:32000966-32000985 | Msa0677650:intron | 30.0% |
| ! | TTTCCTTTGAAGATAATTGG+TGG | - | chr4_4:32001283-32001302 | None:intergenic | 30.0% |
| TAACTGAATTGATATACTGG+AGG | + | chr4_4:32001381-32001400 | Msa0677650:intron | 30.0% | |
| CCCTTTCAGTTAATAGTTTA+TGG | - | chr4_4:32001470-32001489 | None:intergenic | 30.0% | |
| TTAACTGAAAGGGAATAAGT+TGG | + | chr4_4:32001477-32001496 | Msa0677650:intron | 30.0% | |
| GACTTCAAAATATACCACTA+TGG | - | chr4_4:32001818-32001837 | None:intergenic | 30.0% | |
| TGCAGATATTCTACTTCATT+GGG | + | chr4_4:32001882-32001901 | Msa0677650:intron | 30.0% | |
| ATATTCTACTTCATTGGGTT+CGG | + | chr4_4:32001887-32001906 | Msa0677650:CDS | 30.0% | |
| ! | ACTGGAGAGATGAAAATTTT+GGG | - | chr4_4:32002173-32002192 | None:intergenic | 30.0% |
| ! | AACTGGAGAGATGAAAATTT+TGG | - | chr4_4:32002174-32002193 | None:intergenic | 30.0% |
| ATTAAAGAAAGAACTCACAG+CGG | + | chr4_4:32002279-32002298 | Msa0677650:three_prime_UTR | 30.0% | |
| ! | TTTTACGCTTTCGGATTAAA+AGG | + | chr4_4:32002457-32002476 | Msa0677650:three_prime_UTR | 30.0% |
| GGTTATAGGATTGGAATCTA+CGG | - | chr4_4:31994832-31994851 | None:intergenic | 35.0% | |
| AAAAAGGAAGTAACCGCAAA+AGG | - | chr4_4:31995018-31995037 | None:intergenic | 35.0% | |
| CGGAAAAGTGAAAGTGAAAA+AGG | - | chr4_4:31995034-31995053 | None:intergenic | 35.0% | |
| !! | CGCAAACCCTAATTTTAAGA+TGG | + | chr4_4:31995461-31995480 | Msa0677650:intron | 35.0% |
| ! | GATTTTGGATCTATGAAGCA+CGG | - | chr4_4:31995614-31995633 | None:intergenic | 35.0% |
| ! | ACATGTGGTCCAATAGATTT+TGG | - | chr4_4:31995629-31995648 | None:intergenic | 35.0% |
| CTATTGGACCACATGTTATT+AGG | + | chr4_4:31995633-31995652 | Msa0677650:intron | 35.0% | |
| CTGCAGTTTCAAATCAACAA+AGG | - | chr4_4:31995996-31996015 | None:intergenic | 35.0% | |
| TATTAGGATGGAACAGCTAA+AGG | + | chr4_4:31996100-31996119 | Msa0677650:intron | 35.0% | |
| ATGGAACAGCTAAAGGAAAA+GGG | + | chr4_4:31996107-31996126 | Msa0677650:CDS | 35.0% | |
| TTATGACAAAGGAGAGTCAA+TGG | + | chr4_4:31996238-31996257 | Msa0677650:intron | 35.0% | |
| AATTCTAGCAACACGCATTA+CGG | - | chr4_4:31996318-31996337 | None:intergenic | 35.0% | |
| ! | TATATACTTGATAGGTTGGG+AGG | + | chr4_4:31996397-31996416 | Msa0677650:intron | 35.0% |
| ! | ATATACTTGATAGGTTGGGA+GGG | + | chr4_4:31996398-31996417 | Msa0677650:intron | 35.0% |
| ! | TTTCCCTTTTTAATCAACGG+TGG | + | chr4_4:31996424-31996443 | Msa0677650:intron | 35.0% |
| ! | TGCACAAAATCTTTTCCTCA+GGG | - | chr4_4:31996456-31996475 | None:intergenic | 35.0% |
| ! | TTGCACAAAATCTTTTCCTC+AGG | - | chr4_4:31996457-31996476 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTAAGTGTCAAA+AGG | + | chr4_4:31996555-31996574 | Msa0677650:intron | 35.0% |
| TAAGTGTCAAAAGGTTAGAG+TGG | + | chr4_4:31996564-31996583 | Msa0677650:intron | 35.0% | |
| !!! | CTCTCTCTCTTTTTTACTTG+TGG | + | chr4_4:31996590-31996609 | Msa0677650:intron | 35.0% |
| !!! | TCTCTTTTTTACTTGTGGAG+TGG | + | chr4_4:31996595-31996614 | Msa0677650:intron | 35.0% |
| !!! | CTCTTTTTTACTTGTGGAGT+GGG | + | chr4_4:31996596-31996615 | Msa0677650:intron | 35.0% |
| GAGGCAGTTTGTAGAAATAA+TGG | + | chr4_4:31996923-31996942 | Msa0677650:intron | 35.0% | |
| !! | CATATACTCTTTCGAGTTCA+TGG | - | chr4_4:31997153-31997172 | None:intergenic | 35.0% |
| ! | CATGAACTCGAAAGAGTATA+TGG | + | chr4_4:31997151-31997170 | Msa0677650:intron | 35.0% |
| GAGTATATGGATGATGAGAA+CGG | + | chr4_4:31997164-31997183 | Msa0677650:intron | 35.0% | |
| CTCATTGCTAAGTTTGTACT+GGG | + | chr4_4:31997265-31997284 | Msa0677650:intron | 35.0% | |
| TCATTGCTAAGTTTGTACTG+GGG | + | chr4_4:31997266-31997285 | Msa0677650:intron | 35.0% | |
| GTTGCTGTAATTTCTTGCTT+AGG | + | chr4_4:31997345-31997364 | Msa0677650:intron | 35.0% | |
| GATTTCATAATAAGTAGGGC+AGG | + | chr4_4:31997382-31997401 | Msa0677650:intron | 35.0% | |
| AGGACAAGATTTCAACCTAA+AGG | + | chr4_4:31997402-31997421 | Msa0677650:intron | 35.0% | |
| ATCAACATCTGATAGAGGAA+AGG | - | chr4_4:31997566-31997585 | None:intergenic | 35.0% | |
| ! | TCCTCTATCAGATGTTGATT+TGG | + | chr4_4:31997567-31997586 | Msa0677650:intron | 35.0% |
| !! | CCTCTATCAGATGTTGATTT+GGG | + | chr4_4:31997568-31997587 | Msa0677650:intron | 35.0% |
| !! | CTCTATCAGATGTTGATTTG+GGG | + | chr4_4:31997569-31997588 | Msa0677650:intron | 35.0% |
| !! | TCTATCAGATGTTGATTTGG+GGG | + | chr4_4:31997570-31997589 | Msa0677650:intron | 35.0% |
| AAATAGCACCAATCTACATC+AGG | - | chr4_4:31997600-31997619 | None:intergenic | 35.0% | |
| ACAGTTGCATTACGATCATA+AGG | - | chr4_4:31997895-31997914 | None:intergenic | 35.0% | |
| ATCCTCAATAGAAGGTCTAT+CGG | - | chr4_4:31998335-31998354 | None:intergenic | 35.0% | |
| GGCCAAGTAAATTTATAGCA+AGG | - | chr4_4:31998423-31998442 | None:intergenic | 35.0% | |
| AACTAAAATACCTCGTGCAA+TGG | - | chr4_4:31998529-31998548 | None:intergenic | 35.0% | |
| !!! | CACACTTTTAATTTTGCAGC+TGG | + | chr4_4:31998599-31998618 | Msa0677650:intron | 35.0% |
| ! | TGATGAATGATGGGGAAAAA+AGG | - | chr4_4:31998653-31998672 | None:intergenic | 35.0% |
| CAATGTCATGATGAATGATG+GGG | - | chr4_4:31998661-31998680 | None:intergenic | 35.0% | |
| CCAATGTCATGATGAATGAT+GGG | - | chr4_4:31998662-31998681 | None:intergenic | 35.0% | |
| TCCAATGTCATGATGAATGA+TGG | - | chr4_4:31998663-31998682 | None:intergenic | 35.0% | |
| ! | TGCATCCTTTGAAGATGAAT+TGG | - | chr4_4:31998695-31998714 | None:intergenic | 35.0% |
| !! | ACTCTAGAACTGTATAGTCT+AGG | + | chr4_4:31998750-31998769 | Msa0677650:intron | 35.0% |
| CATATGGCAATGAAAACATG+TGG | - | chr4_4:31999049-31999068 | None:intergenic | 35.0% | |
| CAACACACTCTATAAGCATA+TGG | - | chr4_4:31999065-31999084 | None:intergenic | 35.0% | |
| CAACACACTCTATAAGCATA+TGG | - | chr4_4:31999065-31999084 | None:intergenic | 35.0% | |
| TGTCATGGCTATTCATTAGT+GGG | - | chr4_4:31999380-31999399 | None:intergenic | 35.0% | |
| ATGTCATGGCTATTCATTAG+TGG | - | chr4_4:31999381-31999400 | None:intergenic | 35.0% | |
| ATAGCCATGACATATGAATC+TGG | + | chr4_4:31999388-31999407 | Msa0677650:intron | 35.0% | |
| AATAAGAGAGGCAACTGTTA+AGG | - | chr4_4:31999442-31999461 | None:intergenic | 35.0% | |
| GCCAAATTGTGATGTTATCT+TGG | + | chr4_4:31999477-31999496 | Msa0677650:intron | 35.0% | |
| GCCAAGATAACATCACAATT+TGG | - | chr4_4:31999481-31999500 | None:intergenic | 35.0% | |
| TTACTTCTGGATCTTGTATC+AGG | - | chr4_4:31999567-31999586 | None:intergenic | 35.0% | |
| TGAAACAAAACCGAACCATT+TGG | + | chr4_4:31999629-31999648 | Msa0677650:intron | 35.0% | |
| TATGTAGCACAAACACTCAT+CGG | + | chr4_4:31999776-31999795 | Msa0677650:intron | 35.0% | |
| CGAGGAAGTTGTACAATTAA+AGG | + | chr4_4:31999957-31999976 | Msa0677650:intron | 35.0% | |
| !! | AGTAGTGGATATATGGATGA+AGG | + | chr4_4:32000006-32000025 | Msa0677650:intron | 35.0% |
| TATGGATGAAGGTAAAAGAC+TGG | + | chr4_4:32000017-32000036 | Msa0677650:intron | 35.0% | |
| TTTGTAATAATCCGCAGGTT+TGG | + | chr4_4:32000324-32000343 | Msa0677650:intron | 35.0% | |
| GAGAAGGTTTGTCTTACAAT+TGG | + | chr4_4:32000398-32000417 | Msa0677650:intron | 35.0% | |
| ! | GTAAAAGTAGTTTGTACACC+TGG | + | chr4_4:32000734-32000753 | Msa0677650:intron | 35.0% |
| ! | TACCTTCATCTGATCCTTTT+TGG | + | chr4_4:32000845-32000864 | Msa0677650:intron | 35.0% |
| ! | ACCTTCATCTGATCCTTTTT+GGG | + | chr4_4:32000846-32000865 | Msa0677650:intron | 35.0% |
| !!! | TGTCATGCTTTTTCACAAGT+TGG | - | chr4_4:32000951-32000970 | None:intergenic | 35.0% |
| AAAGAACCCAGATAATACAG+GGG | - | chr4_4:32001015-32001034 | None:intergenic | 35.0% | |
| CAAAGAACCCAGATAATACA+GGG | - | chr4_4:32001016-32001035 | None:intergenic | 35.0% | |
| TCAAAGAACCCAGATAATAC+AGG | - | chr4_4:32001017-32001036 | None:intergenic | 35.0% | |
| GTATTATCTGGGTTCTTTGA+TGG | + | chr4_4:32001017-32001036 | Msa0677650:intron | 35.0% | |
| TGTGTTCCATTTCTCTTTAC+AGG | + | chr4_4:32001088-32001107 | Msa0677650:intron | 35.0% | |
| TTCCATTTCTCTTTACAGGA+CGG | + | chr4_4:32001092-32001111 | Msa0677650:intron | 35.0% | |
| !!! | CTGGTTTTTTGTCTCTTACA+TGG | + | chr4_4:32001134-32001153 | Msa0677650:intron | 35.0% |
| ! | TGAGCTTATTGTTTTCTGAC+TGG | + | chr4_4:32001435-32001454 | Msa0677650:intron | 35.0% |
| ! | GAGCTTATTGTTTTCTGACT+GGG | + | chr4_4:32001436-32001455 | Msa0677650:intron | 35.0% |
| ! | AGCTTATTGTTTTCTGACTG+GGG | + | chr4_4:32001437-32001456 | Msa0677650:intron | 35.0% |
| TCCATTTCTGCTCAAACTAA+TGG | + | chr4_4:32001647-32001666 | Msa0677650:intron | 35.0% | |
| ! | ACCATTAGTTTGAGCAGAAA+TGG | - | chr4_4:32001651-32001670 | None:intergenic | 35.0% |
| TACTGTTACAATGTGAACAG+AGG | + | chr4_4:32001680-32001699 | Msa0677650:intron | 35.0% | |
| !!! | CAATGTGAACAGAGGTATTT+TGG | + | chr4_4:32001688-32001707 | Msa0677650:intron | 35.0% |
| CTGCAGATATTCTACTTCAT+TGG | + | chr4_4:32001881-32001900 | Msa0677650:intron | 35.0% | |
| !! | ATTCTATTGACTCTACCTTG+TGG | + | chr4_4:32001992-32002011 | Msa0677650:intron | 35.0% |
| AGTATTAAGAAAGGCGACAA+AGG | - | chr4_4:32002211-32002230 | None:intergenic | 35.0% | |
| GGAAAAAGGGGTTATAGGAT+TGG | - | chr4_4:31994841-31994860 | None:intergenic | 40.0% | |
| ACACTGGAAAAAGGGGTTAT+AGG | - | chr4_4:31994846-31994865 | None:intergenic | 40.0% | |
| AATGCACACACTGGAAAAAG+GGG | - | chr4_4:31994853-31994872 | None:intergenic | 40.0% | |
| GAATGCACACACTGGAAAAA+GGG | - | chr4_4:31994854-31994873 | None:intergenic | 40.0% | |
| AGAATGCACACACTGGAAAA+AGG | - | chr4_4:31994855-31994874 | None:intergenic | 40.0% | |
| TCGGAAGAAAAAGCTTAGTG+CGG | - | chr4_4:31994907-31994926 | None:intergenic | 40.0% | |
| TCTTCTTCTTCGAAAGGGTT+TGG | - | chr4_4:31994982-31995001 | None:intergenic | 40.0% | |
| GAGTCTCTTCTTCTTCGAAA+GGG | - | chr4_4:31994987-31995006 | None:intergenic | 40.0% | |
| TGAGTCTCTTCTTCTTCGAA+AGG | - | chr4_4:31994988-31995007 | None:intergenic | 40.0% | |
| ! | GACTCATGTCAATCCTTTTG+CGG | + | chr4_4:31995002-31995021 | Msa0677650:CDS | 40.0% |
| !! | CATTGGTGATAGTCTCGTTT+TGG | + | chr4_4:31995351-31995370 | Msa0677650:intron | 40.0% |
| CCTTACAAGCTAGTGTTGTA+GGG | + | chr4_4:31995428-31995447 | Msa0677650:intron | 40.0% | |
| ! | GTGTTCGTGCTTCATAGTTT+TGG | - | chr4_4:31995496-31995515 | None:intergenic | 40.0% |
| ! | GTAATTATGTGTGTCGGTGT+CGG | - | chr4_4:31995534-31995553 | None:intergenic | 40.0% |
| TTGAGTGCCCTAATAACATG+TGG | - | chr4_4:31995644-31995663 | None:intergenic | 40.0% | |
| CAAATCACACTTCAGATGTC+CGG | + | chr4_4:31995661-31995680 | Msa0677650:intron | 40.0% | |
| GATGGAACAGCTAAAGGAAA+AGG | + | chr4_4:31996106-31996125 | Msa0677650:CDS | 40.0% | |
| !! | TTTCTGACAAAAGTGTCCAC+AGG | - | chr4_4:31996712-31996731 | None:intergenic | 40.0% |
| TGATAGGAAGAGAGTTCCTA+TGG | + | chr4_4:31996735-31996754 | Msa0677650:intron | 40.0% | |
| ! | GTAGGAGTGTGAAACTTTAG+AGG | + | chr4_4:31996832-31996851 | Msa0677650:intron | 40.0% |
| TTCCATGAAACTGATGGTCA+TGG | + | chr4_4:31996901-31996920 | Msa0677650:intron | 40.0% | |
| TATCCTCCATAGAAACAGGA+TGG | - | chr4_4:31996977-31996996 | None:intergenic | 40.0% | |
| !! | ATCCTGTTTCTATGGAGGAT+AGG | + | chr4_4:31996976-31996995 | Msa0677650:intron | 40.0% |
| !! | TCCTGTTTCTATGGAGGATA+GGG | + | chr4_4:31996977-31996996 | Msa0677650:intron | 40.0% |
| GCTTTCGTAAGCAGTTAGTT+GGG | + | chr4_4:31996999-31997018 | Msa0677650:intron | 40.0% | |
| TTAGCAATGAGCTGCAGAAA+GGG | - | chr4_4:31997256-31997275 | None:intergenic | 40.0% | |
| GCTCATTGCTAAGTTTGTAC+TGG | + | chr4_4:31997264-31997283 | Msa0677650:intron | 40.0% | |
| CATTGCTAAGTTTGTACTGG+GGG | + | chr4_4:31997267-31997286 | Msa0677650:intron | 40.0% | |
| TTTCCATGGAGGGTTTCTTA+AGG | + | chr4_4:31997312-31997331 | Msa0677650:intron | 40.0% | |
| AAACGTTGAAAGCCAGTTTG+TGG | + | chr4_4:31997484-31997503 | Msa0677650:intron | 40.0% | |
| CCCAAATCAACATCTGATAG+AGG | - | chr4_4:31997571-31997590 | None:intergenic | 40.0% | |
| !! | CTATCAGATGTTGATTTGGG+GGG | + | chr4_4:31997571-31997590 | Msa0677650:intron | 40.0% |
| TGTCAGCTAGTGTAATTGCT+TGG | + | chr4_4:31997620-31997639 | Msa0677650:intron | 40.0% | |
| TGTTTGAATTTGCAGAACCC+TGG | + | chr4_4:31997823-31997842 | Msa0677650:intron | 40.0% | |
| ATCATAAGGCTCATGAGGAA+GGG | - | chr4_4:31997881-31997900 | None:intergenic | 40.0% | |
| TTACGATCATAAGGCTCATG+AGG | - | chr4_4:31997886-31997905 | None:intergenic | 40.0% | |
| CTACCTTTGAGCTATCAAGA+GGG | - | chr4_4:31997924-31997943 | None:intergenic | 40.0% | |
| TCTACCTTTGAGCTATCAAG+AGG | - | chr4_4:31997925-31997944 | None:intergenic | 40.0% | |
| TACCGATAGACCTTCTATTG+AGG | + | chr4_4:31998330-31998349 | Msa0677650:intron | 40.0% | |
| AATCCTGAAATGGAAGGTAG+AGG | - | chr4_4:31998378-31998397 | None:intergenic | 40.0% | |
| GTAGGAACTAAAACGAAGAG+AGG | + | chr4_4:31998500-31998519 | Msa0677650:intron | 40.0% | |
| ! | TGAATGATGGGGAAAAAAGG+TGG | - | chr4_4:31998650-31998669 | None:intergenic | 40.0% |
| CCCATCATTCATCATGACAT+TGG | + | chr4_4:31998659-31998678 | Msa0677650:CDS | 40.0% | |
| AAAAGAGGGCTCAATAAGAG+AGG | - | chr4_4:31999454-31999473 | None:intergenic | 40.0% | |
| TGATTTACCCAACAGCCAAA+TGG | - | chr4_4:31999647-31999666 | None:intergenic | 40.0% | |
| ACATAGGTATACAGCTTCCT+AGG | - | chr4_4:31999761-31999780 | None:intergenic | 40.0% | |
| GATGAGTGTTTGTGCTACAT+AGG | - | chr4_4:31999777-31999796 | None:intergenic | 40.0% | |
| GCTTCATAGCTGTATACTCT+AGG | + | chr4_4:31999918-31999937 | Msa0677650:intron | 40.0% | |
| GGAGTAATAACAATCAGTCG+AGG | + | chr4_4:31999939-31999958 | Msa0677650:intron | 40.0% | |
| GTGTCTTCTGTGGAATATAG+TGG | + | chr4_4:32000351-32000370 | Msa0677650:CDS | 40.0% | |
| GTTACTACTGCTTGGATCAA+AGG | + | chr4_4:32000376-32000395 | Msa0677650:CDS | 40.0% | |
| ATTGTCCCATCAATCTTGCT+AGG | + | chr4_4:32000423-32000442 | Msa0677650:intron | 40.0% | |
| CATAGCCTAGCAAGATTGAT+GGG | - | chr4_4:32000431-32000450 | None:intergenic | 40.0% | |
| ! | ATGTTCTTTTCTTGCCTTGC+AGG | + | chr4_4:32000456-32000475 | Msa0677650:intron | 40.0% |
| ATAGCAAGAAACCAGATGGT+TGG | - | chr4_4:32000483-32000502 | None:intergenic | 40.0% | |
| ACAATTACAGTTGCCTTCCA+AGG | - | chr4_4:32000783-32000802 | None:intergenic | 40.0% | |
| !! | TCAGATGAAGGTATTGCACA+AGG | - | chr4_4:32000838-32000857 | None:intergenic | 40.0% |
| TCCCAAAAAGGATCAGATGA+AGG | - | chr4_4:32000850-32000869 | None:intergenic | 40.0% | |
| !! | TTCATCTGATCCTTTTTGGG+AGG | + | chr4_4:32000849-32000868 | Msa0677650:intron | 40.0% |
| !! | TCATCTGATCCTTTTTGGGA+GGG | + | chr4_4:32000850-32000869 | Msa0677650:intron | 40.0% |
| ACAGAAACCCCTGTATTATC+TGG | + | chr4_4:32001005-32001024 | Msa0677650:intron | 40.0% | |
| CAGAAACCCCTGTATTATCT+GGG | + | chr4_4:32001006-32001025 | Msa0677650:intron | 40.0% | |
| GCTCCACCAATTATCTTCAA+AGG | + | chr4_4:32001277-32001296 | Msa0677650:intron | 40.0% | |
| GAATTGATATACTGGAGGCA+AGG | + | chr4_4:32001386-32001405 | Msa0677650:intron | 40.0% | |
| ATATACTGGAGGCAAGGAAA+AGG | + | chr4_4:32001392-32001411 | Msa0677650:intron | 40.0% | |
| GACGTAGCTCAGCAATATAA+CGG | + | chr4_4:32001601-32001620 | Msa0677650:intron | 40.0% | |
| ATCATCATCTTGTGCCATAG+TGG | + | chr4_4:32001801-32001820 | Msa0677650:intron | 40.0% | |
| GCACTGTAACAGTAGTAACT+TGG | + | chr4_4:32001968-32001987 | Msa0677650:intron | 40.0% | |
| CAGTCAAACAAGAAACCACA+AGG | - | chr4_4:32002010-32002029 | None:intergenic | 40.0% | |
| !! | CAAGTATTGATGTACTTCCG+TGG | + | chr4_4:32002048-32002067 | Msa0677650:CDS | 40.0% |
| !!! | TGATGTTTTTTCCTGGCTTC+TGG | + | chr4_4:32002232-32002251 | Msa0677650:three_prime_UTR | 40.0% |
| TGGGAAACGTTAAGTGTCAA+AGG | - | chr4_4:32002341-32002360 | None:intergenic | 40.0% | |
| CAGAGTGTAGTGTGCAGTTT+CGG | + | chr4_4:31994771-31994790 | Msa0677650:five_prime_UTR | 45.0% | |
| GCCTTACAAGCTAGTGTTGT+AGG | + | chr4_4:31995427-31995446 | Msa0677650:intron | 45.0% | |
| ! | CCCTACAACACTAGCTTGTA+AGG | - | chr4_4:31995431-31995450 | None:intergenic | 45.0% |
| GGATCTATGAAGCACGGATA+TGG | - | chr4_4:31995608-31995627 | None:intergenic | 45.0% | |
| ! | ACACTTCAGATGTCCGGTTT+TGG | + | chr4_4:31995667-31995686 | Msa0677650:intron | 45.0% |
| ! | CACTTCAGATGTCCGGTTTT+GGG | + | chr4_4:31995668-31995687 | Msa0677650:intron | 45.0% |
| ACAGCTAAAGGAAAAGGGTC+AGG | + | chr4_4:31996112-31996131 | Msa0677650:CDS | 45.0% | |
| TCAGGACAATCCAGTTATGG+TGG | + | chr4_4:31996130-31996149 | Msa0677650:CDS | 45.0% | |
| AAATGCACCTCCACCATAAC+TGG | - | chr4_4:31996143-31996162 | None:intergenic | 45.0% | |
| TTGTGCAAGTTGTCTGAGAG+AGG | + | chr4_4:31996469-31996488 | Msa0677650:intron | 45.0% | |
| !! | CAAAAGTGTCCACAGGAACA+CGG | - | chr4_4:31996705-31996724 | None:intergenic | 45.0% |
| AGAGTTCCTATGGAGAGGAA+GGG | + | chr4_4:31996745-31996764 | Msa0677650:intron | 45.0% | |
| ACCAGGTGAAACGGAAGAAA+CGG | - | chr4_4:31996778-31996797 | None:intergenic | 45.0% | |
| TGACAGCTAACCAGGTGAAA+CGG | - | chr4_4:31996787-31996806 | None:intergenic | 45.0% | |
| TACCAGCATCAAAACAGGAG+AGG | - | chr4_4:31996815-31996834 | None:intergenic | 45.0% | |
| !!! | TCTCCTGTTTTGATGCTGGT+AGG | + | chr4_4:31996814-31996833 | Msa0677650:intron | 45.0% |
| ACTCCTACCAGCATCAAAAC+AGG | - | chr4_4:31996820-31996839 | None:intergenic | 45.0% | |
| ACTTTCATGCTGAACGGTCA+AGG | + | chr4_4:31996864-31996883 | Msa0677650:intron | 45.0% | |
| CTCCATGACCATCAGTTTCA+TGG | - | chr4_4:31996906-31996925 | None:intergenic | 45.0% | |
| CATGAAACTGATGGTCATGG+AGG | + | chr4_4:31996904-31996923 | Msa0677650:intron | 45.0% | |
| !! | GACATGCCATCCTGTTTCTA+TGG | + | chr4_4:31996968-31996987 | Msa0677650:intron | 45.0% |
| !! | ATGCCATCCTGTTTCTATGG+AGG | + | chr4_4:31996971-31996990 | Msa0677650:intron | 45.0% |
| GGCTTTCGTAAGCAGTTAGT+TGG | + | chr4_4:31996998-31997017 | Msa0677650:intron | 45.0% | |
| CGACAATGATGTACCATGTG+AGG | + | chr4_4:31997045-31997064 | Msa0677650:intron | 45.0% | |
| ATGATGTACCATGTGAGGAC+AGG | + | chr4_4:31997050-31997069 | Msa0677650:intron | 45.0% | |
| TGATGTACCATGTGAGGACA+GGG | + | chr4_4:31997051-31997070 | Msa0677650:intron | 45.0% | |
| AAGTAAACCCTGTCCTCACA+TGG | - | chr4_4:31997061-31997080 | None:intergenic | 45.0% | |
| !! | GAGTTCATGGGCTTTGTTGA+AGG | - | chr4_4:31997140-31997159 | None:intergenic | 45.0% |
| AACGGCTGTGTCTGTTTGTT+GGG | + | chr4_4:31997182-31997201 | Msa0677650:intron | 45.0% | |
| ! | TCTGTTTGTTGGGTTCACCA+GGG | + | chr4_4:31997192-31997211 | Msa0677650:intron | 45.0% |
| CTTAGCAATGAGCTGCAGAA+AGG | - | chr4_4:31997257-31997276 | None:intergenic | 45.0% | |
| AGAAACCCTCCATGGAAACT+GGG | - | chr4_4:31997310-31997329 | None:intergenic | 45.0% | |
| AAGAAACCCTCCATGGAAAC+TGG | - | chr4_4:31997311-31997330 | None:intergenic | 45.0% | |
| TCATAAGGCTCATGAGGAAG+GGG | - | chr4_4:31997880-31997899 | None:intergenic | 45.0% | |
| GATCATAAGGCTCATGAGGA+AGG | - | chr4_4:31997882-31997901 | None:intergenic | 45.0% | |
| ! | CATCCCTCTTGATAGCTCAA+AGG | + | chr4_4:31997918-31997937 | Msa0677650:CDS | 45.0% |
| GGATGTCAAAGCAAAGGAGA+AGG | + | chr4_4:31998037-31998056 | Msa0677650:intron | 45.0% | |
| ! | AGTTGCACTTGCTACCAGTT+AGG | - | chr4_4:31998245-31998264 | None:intergenic | 45.0% |
| CTACCTCTACCTTCCATTTC+AGG | + | chr4_4:31998372-31998391 | Msa0677650:intron | 45.0% | |
| TGCAGCTGGCATAGTTATAG+AGG | + | chr4_4:31998613-31998632 | Msa0677650:intron | 45.0% | |
| !!! | TCAGTCTGCTTGTTTTGAGC+AGG | - | chr4_4:31999347-31999366 | None:intergenic | 45.0% |
| ATTGTCCACCGAGAATGATG+AGG | + | chr4_4:31999413-31999432 | Msa0677650:intron | 45.0% | |
| TAAGGCAGCCTCATCATTCT+CGG | - | chr4_4:31999424-31999443 | None:intergenic | 45.0% | |
| GACTAATACATGGGAGCTGA+TGG | - | chr4_4:31999509-31999528 | None:intergenic | 45.0% | |
| AAACCGAACCATTTGGCTGT+TGG | + | chr4_4:31999636-31999655 | Msa0677650:intron | 45.0% | |
| AACCGAACCATTTGGCTGTT+GGG | + | chr4_4:31999637-31999656 | Msa0677650:intron | 45.0% | |
| TACCCAACAGCCAAATGGTT+CGG | - | chr4_4:31999642-31999661 | None:intergenic | 45.0% | |
| TGGGTAAATCACACAGACCA+AGG | + | chr4_4:31999656-31999675 | Msa0677650:intron | 45.0% | |
| ACAGACCAAGGATCTCAGAT+AGG | + | chr4_4:31999668-31999687 | Msa0677650:intron | 45.0% | |
| ! | GTGTTCCTATCTGAGATCCT+TGG | - | chr4_4:31999676-31999695 | None:intergenic | 45.0% |
| GCACAAACACTCATCGGATT+AGG | + | chr4_4:31999782-31999801 | Msa0677650:intron | 45.0% | |
| AAGAAACAACGACTCCGACA+TGG | - | chr4_4:32000212-32000231 | None:intergenic | 45.0% | |
| !! | TGTCGGAGTCGTTGTTTCTT+AGG | + | chr4_4:32000212-32000231 | Msa0677650:intron | 45.0% |
| AAGACACAGAACCAAACCTG+CGG | - | chr4_4:32000338-32000357 | None:intergenic | 45.0% | |
| !! | GTTTGGTTCTGTGTCTTCTG+TGG | + | chr4_4:32000341-32000360 | Msa0677650:CDS | 45.0% |
| TAGTGGCTGTTACTACTGCT+TGG | + | chr4_4:32000368-32000387 | Msa0677650:CDS | 45.0% | |
| ACTGCTTGGATCAAAGGAGA+AGG | + | chr4_4:32000382-32000401 | Msa0677650:CDS | 45.0% | |
| GCATAGCCTAGCAAGATTGA+TGG | - | chr4_4:32000432-32000451 | None:intergenic | 45.0% | |
| TTCCAGCATCCTATGTGATG+TGG | + | chr4_4:32000523-32000542 | Msa0677650:CDS | 45.0% | |
| TACCACATCACATAGGATGC+TGG | - | chr4_4:32000528-32000547 | None:intergenic | 45.0% | |
| ACCTCATAGCGCGATAAAGA+GGG | - | chr4_4:32000554-32000573 | None:intergenic | 45.0% | |
| TACCTCATAGCGCGATAAAG+AGG | - | chr4_4:32000555-32000574 | None:intergenic | 45.0% | |
| ATTCTCCATGCATATCACCC+AGG | - | chr4_4:32000755-32000774 | None:intergenic | 45.0% | |
| !! | CATCTGATCCTTTTTGGGAG+GGG | + | chr4_4:32000851-32000870 | Msa0677650:intron | 45.0% |
| GTCCGTCCTGTAAAGAGAAA+TGG | - | chr4_4:32001097-32001116 | None:intergenic | 45.0% | |
| GCTGAGCTACGTCAAAATCA+TGG | - | chr4_4:32001594-32001613 | None:intergenic | 45.0% | |
| TTGGCTGCGATTGATGTGAT+AGG | + | chr4_4:32001707-32001726 | Msa0677650:CDS | 45.0% | |
| !! | GATGAGCGTTTGGGTTTTTC+AGG | + | chr4_4:32001931-32001950 | Msa0677650:CDS | 45.0% |
| TTGATGTACTTCCGTGGAAG+CGG | + | chr4_4:32002054-32002073 | Msa0677650:CDS | 45.0% | |
| ATGATGGCAGCTCTATGACT+TGG | + | chr4_4:32002117-32002136 | Msa0677650:exon | 45.0% | |
| ! | TTTTTCCTGGCTTCTGGTCT+AGG | + | chr4_4:32002238-32002257 | Msa0677650:three_prime_UTR | 45.0% |
| ! | TTTTCCTGGCTTCTGGTCTA+GGG | + | chr4_4:32002239-32002258 | Msa0677650:three_prime_UTR | 45.0% |
| TCTTCAACCGATTGTTCAGC+TGG | + | chr4_4:32002497-32002516 | Msa0677650:three_prime_UTR | 45.0% | |
| CTTCAACCGATTGTTCAGCT+GGG | + | chr4_4:32002498-32002517 | Msa0677650:three_prime_UTR | 45.0% | |
| !!! | TATTGATATTTTTTTTTTTT+TGG | + | chr4_4:31996017-31996036 | Msa0677650:intron | 5.0% |
| GCAGTGTAGAATGCACACAC+TGG | - | chr4_4:31994862-31994881 | None:intergenic | 50.0% | |
| !!! | ATGTCCGGTTTTGGGTGTGA+GGG | + | chr4_4:31995676-31995695 | Msa0677650:intron | 50.0% |
| GTGACTTGAGAGTCGCACAT+TGG | + | chr4_4:31995707-31995726 | Msa0677650:intron | 50.0% | |
| TGAGAGTCGCACATTGGATG+AGG | + | chr4_4:31995713-31995732 | Msa0677650:intron | 50.0% | |
| GGGTCAGGACAATCCAGTTA+TGG | + | chr4_4:31996127-31996146 | Msa0677650:CDS | 50.0% | |
| GGACAATCCAGTTATGGTGG+AGG | + | chr4_4:31996133-31996152 | Msa0677650:CDS | 50.0% | |
| !! | CAACGGTGGATTTTTCCCTG+AGG | + | chr4_4:31996438-31996457 | Msa0677650:intron | 50.0% |
| GGAAGAGAGTTCCTATGGAG+AGG | + | chr4_4:31996740-31996759 | Msa0677650:intron | 50.0% | |
| GAGAGTTCCTATGGAGAGGA+AGG | + | chr4_4:31996744-31996763 | Msa0677650:intron | 50.0% | |
| ATAGCACCCTTCCTCTCCAT+AGG | - | chr4_4:31996754-31996773 | None:intergenic | 50.0% | |
| TCCGTTTCTTCCGTTTCACC+TGG | + | chr4_4:31996774-31996793 | Msa0677650:intron | 50.0% | |
| AGGCATCTTGACAGCTAACC+AGG | - | chr4_4:31996795-31996814 | None:intergenic | 50.0% | |
| !!! | TGCCTCTCCTGTTTTGATGC+TGG | + | chr4_4:31996810-31996829 | Msa0677650:intron | 50.0% |
| CAGGATGGCATGTCTATCCA+TGG | - | chr4_4:31996962-31996981 | None:intergenic | 50.0% | |
| GCCCTATCCTCCATAGAAAC+AGG | - | chr4_4:31996981-31997000 | None:intergenic | 50.0% | |
| GAACGGCTGTGTCTGTTTGT+TGG | + | chr4_4:31997181-31997200 | Msa0677650:intron | 50.0% | |
| ! | GTCTGTTTGTTGGGTTCACC+AGG | + | chr4_4:31997191-31997210 | Msa0677650:intron | 50.0% |
| !! | GTGTATGGGTGGTGGGAAAT+TGG | + | chr4_4:31997216-31997235 | Msa0677650:intron | 50.0% |
| TTTGTACTGGGGGCTATGCA+GGG | + | chr4_4:31997277-31997296 | Msa0677650:intron | 50.0% | |
| ACGCCTTAAGAAACCCTCCA+TGG | - | chr4_4:31997318-31997337 | None:intergenic | 50.0% | |
| GGGGGTAACCTGATGTAGAT+TGG | + | chr4_4:31997589-31997608 | Msa0677650:intron | 50.0% | |
| AGGGCGATACCACATCACAT+AGG | - | chr4_4:32000535-32000554 | None:intergenic | 50.0% | |
| GTACACCTGGGTGATATGCA+TGG | + | chr4_4:32000747-32000766 | Msa0677650:intron | 50.0% | |
| TGCATGGAGAATGTGAGCCT+TGG | + | chr4_4:32000763-32000782 | Msa0677650:intron | 50.0% | |
| TGGAGAATGTGAGCCTTGGA+AGG | + | chr4_4:32000767-32000786 | Msa0677650:intron | 50.0% | |
| CTTGCAATCCCCTCTTCTTC+TGG | - | chr4_4:32000880-32000899 | None:intergenic | 50.0% | |
| GGGGATTGCAAGTAGAGCAT+CGG | + | chr4_4:32000888-32000907 | Msa0677650:intron | 50.0% | |
| !! | GATTGCAAGTAGAGCATCGG+AGG | + | chr4_4:32000891-32000910 | Msa0677650:intron | 50.0% |
| !! | AAGTAGAGCATCGGAGGAGT+GGG | + | chr4_4:32000897-32000916 | Msa0677650:intron | 50.0% |
| !! | ACGGACAGTGCTCTGAAGTT+TGG | + | chr4_4:32001111-32001130 | Msa0677650:intron | 50.0% |
| !! | ACAGTGCTCTGAAGTTTGGC+TGG | + | chr4_4:32001115-32001134 | Msa0677650:intron | 50.0% |
| GCTGCGATTGATGTGATAGG+CGG | + | chr4_4:32001710-32001729 | Msa0677650:CDS | 50.0% | |
| TCGAGTCACTGATGAGCGTT+TGG | + | chr4_4:32001921-32001940 | Msa0677650:CDS | 50.0% | |
| CGAGTCACTGATGAGCGTTT+GGG | + | chr4_4:32001922-32001941 | Msa0677650:CDS | 50.0% | |
| AGGTGCAAGGAACTGGTAAC+TGG | - | chr4_4:32002191-32002210 | None:intergenic | 50.0% | |
| ! | AGAAAGGCGACAAAGGTGCA+AGG | - | chr4_4:32002204-32002223 | None:intergenic | 50.0% |
| AACCGATTGTTCAGCTGGGA+GGG | + | chr4_4:32002502-32002521 | Msa0677650:three_prime_UTR | 50.0% | |
| !!! | GATGTCCGGTTTTGGGTGTG+AGG | + | chr4_4:31995675-31995694 | Msa0677650:intron | 55.0% |
| !!! | TGTCCGGTTTTGGGTGTGAG+GGG | + | chr4_4:31995677-31995696 | Msa0677650:intron | 55.0% |
| AAGGCAACACCGTGTTCCTG+TGG | + | chr4_4:31996693-31996712 | Msa0677650:intron | 55.0% | |
| ! | TGGGTTCACCAGGGAGTGTA+TGG | + | chr4_4:31997201-31997220 | Msa0677650:intron | 55.0% |
| ! | GGGTTCACCAGGGAGTGTAT+GGG | + | chr4_4:31997202-31997221 | Msa0677650:intron | 55.0% |
| ! | TTCACCAGGGAGTGTATGGG+TGG | + | chr4_4:31997205-31997224 | Msa0677650:intron | 55.0% |
| GTTTGTACTGGGGGCTATGC+AGG | + | chr4_4:31997276-31997295 | Msa0677650:intron | 55.0% | |
| ! | GGAAGTACGCCCAGTTTCCA+TGG | + | chr4_4:31997298-31997317 | Msa0677650:intron | 55.0% |
| AGTACGCCCAGTTTCCATGG+AGG | + | chr4_4:31997301-31997320 | Msa0677650:intron | 55.0% | |
| GTACGCCCAGTTTCCATGGA+GGG | + | chr4_4:31997302-31997321 | Msa0677650:intron | 55.0% | |
| CCGCAGAAGGAACACTTCCA+GGG | - | chr4_4:31997843-31997862 | None:intergenic | 55.0% | |
| !! | CCCTGGAAGTGTTCCTTCTG+CGG | + | chr4_4:31997840-31997859 | Msa0677650:CDS | 55.0% |
| AGGAAGGGGTGAGAGTCTTG+AGG | - | chr4_4:31997866-31997885 | None:intergenic | 55.0% | |
| AGAGAGGATGCCATTGCACG+AGG | + | chr4_4:31998516-31998535 | Msa0677650:CDS | 55.0% | |
| TACGACGCGTGTCAGACACT+GGG | - | chr4_4:31999813-31999832 | None:intergenic | 55.0% | |
| ATACGACGCGTGTCAGACAC+TGG | - | chr4_4:31999814-31999833 | None:intergenic | 55.0% | |
| !! | TAGTGTCGGCGTGTCCATGT+CGG | + | chr4_4:32000195-32000214 | Msa0677650:intron | 55.0% |
| ACCAGATGGTTGGACCTGCA+AGG | - | chr4_4:32000473-32000492 | None:intergenic | 55.0% | |
| GCCCTCTTTATCGCGCTATG+AGG | + | chr4_4:32000550-32000569 | Msa0677650:CDS | 55.0% | |
| ! | TCTGGAGTCCCCTCCCAAAA+AGG | - | chr4_4:32000862-32000881 | None:intergenic | 55.0% |
| GAGGGGACTCCAGAAGAAGA+GGG | + | chr4_4:32000868-32000887 | Msa0677650:intron | 55.0% | |
| AGGGGACTCCAGAAGAAGAG+GGG | + | chr4_4:32000869-32000888 | Msa0677650:intron | 55.0% | |
| !! | CAAGTAGAGCATCGGAGGAG+TGG | + | chr4_4:32000896-32000915 | Msa0677650:intron | 55.0% |
| TGTGATAGGCGGCAGTGCAT+TGG | + | chr4_4:32001721-32001740 | Msa0677650:CDS | 55.0% | |
| ! | ATAGGCGGCAGTGCATTGGT+TGG | + | chr4_4:32001725-32001744 | Msa0677650:CDS | 55.0% |
| !! | TAGGCGGCAGTGCATTGGTT+GGG | + | chr4_4:32001726-32001745 | Msa0677650:CDS | 55.0% |
| AGCTGCCATCATCGTTCCTC+TGG | - | chr4_4:32002109-32002128 | None:intergenic | 55.0% | |
| ! | GCGACAAAGGTGCAAGGAAC+TGG | - | chr4_4:32002198-32002217 | None:intergenic | 55.0% |
| TCAACCCTAGACCAGAAGCC+AGG | - | chr4_4:32002246-32002265 | None:intergenic | 55.0% | |
| CAACCGATTGTTCAGCTGGG+AGG | + | chr4_4:32002501-32002520 | Msa0677650:three_prime_UTR | 55.0% | |
| AGCCCTCCCAGCTGAACAAT+CGG | - | chr4_4:32002507-32002526 | None:intergenic | 55.0% | |
| !!! | GTCCGGTTTTGGGTGTGAGG+GGG | + | chr4_4:31995678-31995697 | Msa0677650:intron | 60.0% |
| CACCCCCTCACACCCAAAAC+CGG | - | chr4_4:31995683-31995702 | None:intergenic | 60.0% | |
| ! | ACCAGGGAGTGTATGGGTGG+TGG | + | chr4_4:31997208-31997227 | Msa0677650:intron | 60.0% |
| ! | CCAGGGAGTGTATGGGTGGT+GGG | + | chr4_4:31997209-31997228 | Msa0677650:intron | 60.0% |
| GAGCTGCAGAAAGGGACGAC+AGG | - | chr4_4:31997248-31997267 | None:intergenic | 60.0% | |
| GCCGCAGAAGGAACACTTCC+AGG | - | chr4_4:31997844-31997863 | None:intergenic | 60.0% | |
| GAGAGTCTTGAGGCCGCAGA+AGG | - | chr4_4:31997856-31997875 | None:intergenic | 60.0% | |
| GGCAGCCTCATCATTCTCGG+TGG | - | chr4_4:31999421-31999440 | None:intergenic | 60.0% | |
| GCCTTGCAGGTCCAACCATC+TGG | + | chr4_4:32000469-32000488 | Msa0677650:intron | 60.0% | |
| GGAGGGGACTCCAGAAGAAG+AGG | + | chr4_4:32000867-32000886 | Msa0677650:intron | 60.0% | |
| !! | TAGAGCATCGGAGGAGTGGG+TGG | + | chr4_4:32000900-32000919 | Msa0677650:intron | 60.0% |
| !! | AGGCGGCAGTGCATTGGTTG+GGG | + | chr4_4:32001727-32001746 | Msa0677650:CDS | 60.0% |
| GTACTTCCGTGGAAGCGGCA+AGG | + | chr4_4:32002059-32002078 | Msa0677650:CDS | 60.0% | |
| GGCAGCCAGAGGAACGATGA+TGG | + | chr4_4:32002101-32002120 | Msa0677650:CDS | 60.0% | |
| CCCACCACCCATACACTCCC+TGG | - | chr4_4:31997212-31997231 | None:intergenic | 65.0% | |
| ! | CTGCAGCCTTGCCGCTTCCA+CGG | - | chr4_4:32002068-32002087 | None:intergenic | 65.0% |
| GGCTGCAGAGCTGAAGCGAG+AGG | + | chr4_4:32002080-32002099 | Msa0677650:CDS | 65.0% | |
| CTGAAGCGAGAGGCAGCCAG+AGG | + | chr4_4:32002090-32002109 | Msa0677650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 31994751 | 32002567 | 31994751 | ID=Msa0677650;Name=Msa0677650 |
| chr4_4 | mRNA | 31994751 | 32002567 | 31994751 | ID=Msa0677650-mRNA-1;Parent=Msa0677650;Name=Msa0677650-mRNA-1;_AED=0.17;_eAED=0.17;_QI=213|0.9|1|1|0.8|1|11|433|268 |
| chr4_4 | exon | 31994751 | 31995023 | 31994751 | ID=Msa0677650-mRNA-1:exon:7886;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 31996106 | 31996171 | 31996106 | ID=Msa0677650-mRNA-1:exon:7887;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 31997838 | 31997939 | 31997838 | ID=Msa0677650-mRNA-1:exon:7888;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 31998038 | 31998100 | 31998038 | ID=Msa0677650-mRNA-1:exon:7889;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 31998504 | 31998537 | 31998504 | ID=Msa0677650-mRNA-1:exon:7890;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 31998618 | 31998740 | 31998618 | ID=Msa0677650-mRNA-1:exon:7891;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 32000341 | 32000403 | 32000341 | ID=Msa0677650-mRNA-1:exon:7892;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 32000478 | 32000571 | 32000478 | ID=Msa0677650-mRNA-1:exon:7893;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 32001700 | 32001748 | 32001700 | ID=Msa0677650-mRNA-1:exon:7894;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 32001887 | 32001952 | 32001887 | ID=Msa0677650-mRNA-1:exon:7895;Parent=Msa0677650-mRNA-1 |
| chr4_4 | exon | 32002048 | 32002567 | 32002048 | ID=Msa0677650-mRNA-1:exon:7896;Parent=Msa0677650-mRNA-1 |
| chr4_4 | five_prime_UTR | 31994751 | 31994963 | 31994751 | ID=Msa0677650-mRNA-1:five_prime_utr;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 31994964 | 31995023 | 31994964 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 31996106 | 31996171 | 31996106 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 31997838 | 31997939 | 31997838 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 31998038 | 31998100 | 31998038 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 31998504 | 31998537 | 31998504 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 31998618 | 31998740 | 31998618 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 32000341 | 32000403 | 32000341 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 32000478 | 32000571 | 32000478 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 32001700 | 32001748 | 32001700 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 32001887 | 32001952 | 32001887 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | CDS | 32002048 | 32002134 | 32002048 | ID=Msa0677650-mRNA-1:cds;Parent=Msa0677650-mRNA-1 |
| chr4_4 | three_prime_UTR | 32002135 | 32002567 | 32002135 | ID=Msa0677650-mRNA-1:three_prime_utr;Parent=Msa0677650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
