Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037640 | XP_003626548.1 | 95.781 | 474 | 0 | 2 | 1 | 454 | 1 | 474 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037640 | sp|P38557|TBG1_ARATH | 92.144 | 471 | 17 | 2 | 1 | 451 | 1 | 471 | 0.0 | 898 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037640 | G7L416 | 95.781 | 474 | 0 | 2 | 1 | 454 | 1 | 474 | 0.0 | 932 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa1037640 | 0.909690 | 4.307414e-82 | -8.615850e-47 |
| Msa0027230 | Msa1037640 | 0.800451 | 1.432264e-48 | -8.615850e-47 |
| Msa0028420 | Msa1037640 | 0.818069 | 2.376348e-52 | -8.615850e-47 |
| Msa0032920 | Msa1037640 | -0.811452 | 6.951204e-51 | -8.615850e-47 |
| Msa0039790 | Msa1037640 | 0.855035 | 8.261129e-62 | -8.615850e-47 |
| Msa0043670 | Msa1037640 | -0.812499 | 4.112181e-51 | -8.615850e-47 |
| Msa0075220 | Msa1037640 | 0.814312 | 1.642672e-51 | -8.615850e-47 |
| Msa0090400 | Msa1037640 | 0.814550 | 1.454997e-51 | -8.615850e-47 |
| Msa0095900 | Msa1037640 | 0.801016 | 1.098725e-48 | -8.615850e-47 |
| Msa0608320 | Msa1037640 | 0.817740 | 2.818467e-52 | -8.615850e-47 |
| Msa0618240 | Msa1037640 | 0.839112 | 1.925713e-57 | -8.615850e-47 |
| Msa0626450 | Msa1037640 | 0.819783 | 9.689639e-53 | -8.615850e-47 |
| Msa0626490 | Msa1037640 | 0.824130 | 9.533945e-54 | -8.615850e-47 |
| Msa0643300 | Msa1037640 | 0.803942 | 2.739559e-49 | -8.615850e-47 |
| Msa0661790 | Msa1037640 | 0.810729 | 9.974182e-51 | -8.615850e-47 |
| Msa0664600 | Msa1037640 | 0.817495 | 3.200692e-52 | -8.615850e-47 |
| Msa0677650 | Msa1037640 | 0.804272 | 2.339412e-49 | -8.615850e-47 |
| Msa0683570 | Msa1037640 | 0.835355 | 1.761289e-56 | -8.615850e-47 |
| Msa0694200 | Msa1037640 | 0.808087 | 3.678490e-50 | -8.615850e-47 |
| Msa0709780 | Msa1037640 | 0.806799 | 6.902216e-50 | -8.615850e-47 |
| Msa0724910 | Msa1037640 | 0.800796 | 1.218352e-48 | -8.615850e-47 |
| Msa0738040 | Msa1037640 | 0.814313 | 1.641541e-51 | -8.615850e-47 |
| Msa0749740 | Msa1037640 | 0.811238 | 7.737338e-51 | -8.615850e-47 |
| Msa0754520 | Msa1037640 | 0.808145 | 3.576273e-50 | -8.615850e-47 |
| Msa0765840 | Msa1037640 | 0.810856 | 9.362897e-51 | -8.615850e-47 |
| Msa0833220 | Msa1037640 | 0.800955 | 1.130628e-48 | -8.615850e-47 |
| Msa0120840 | Msa1037640 | 0.801165 | 1.024150e-48 | -8.615850e-47 |
| Msa0122970 | Msa1037640 | 0.816367 | 5.736664e-52 | -8.615850e-47 |
| Msa0134180 | Msa1037640 | 0.847741 | 9.544346e-60 | -8.615850e-47 |
| Msa0136650 | Msa1037640 | 0.831337 | 1.767627e-55 | -8.615850e-47 |
| Msa0137880 | Msa1037640 | 0.839090 | 1.950471e-57 | -8.615850e-47 |
| Msa0164610 | Msa1037640 | 0.842259 | 2.884362e-58 | -8.615850e-47 |
| Msa0167520 | Msa1037640 | 0.801712 | 7.911447e-49 | -8.615850e-47 |
| Msa0168500 | Msa1037640 | 0.812372 | 4.383380e-51 | -8.615850e-47 |
| Msa0180930 | Msa1037640 | 0.877826 | 4.602201e-69 | -8.615850e-47 |
| Msa0222560 | Msa1037640 | 0.830313 | 3.150775e-55 | -8.615850e-47 |
| Msa0225680 | Msa1037640 | 0.815264 | 1.010729e-51 | -8.615850e-47 |
| Msa0380620 | Msa1037640 | 0.815357 | 9.636414e-52 | -8.615850e-47 |
| Msa0386850 | Msa1037640 | 0.806737 | 7.112752e-50 | -8.615850e-47 |
| Msa0390970 | Msa1037640 | 0.818044 | 2.406923e-52 | -8.615850e-47 |
| Msa0428150 | Msa1037640 | 0.853579 | 2.176921e-61 | -8.615850e-47 |
| Msa0430260 | Msa1037640 | 0.832768 | 7.827696e-56 | -8.615850e-47 |
| Msa0434920 | Msa1037640 | 0.844479 | 7.371614e-59 | -8.615850e-47 |
| Msa0435420 | Msa1037640 | 0.827508 | 1.504958e-54 | -8.615850e-47 |
| Msa0435570 | Msa1037640 | 0.811746 | 6.000431e-51 | -8.615850e-47 |
| Msa0442830 | Msa1037640 | 0.826524 | 2.587821e-54 | -8.615850e-47 |
| Msa0444070 | Msa1037640 | 0.836616 | 8.430511e-57 | -8.615850e-47 |
| Msa0462500 | Msa1037640 | 0.847556 | 1.073043e-59 | -8.615850e-47 |
| Msa0478870 | Msa1037640 | 0.821733 | 3.451138e-53 | -8.615850e-47 |
| Msa0480220 | Msa1037640 | 0.803387 | 3.571745e-49 | -8.615850e-47 |
| Msa0981320 | Msa1037640 | 0.847862 | 8.841952e-60 | -8.615850e-47 |
| Msa1011460 | Msa1037640 | 0.801859 | 7.379839e-49 | -8.615850e-47 |
| Msa1018690 | Msa1037640 | 0.841378 | 4.928976e-58 | -8.615850e-47 |
| Msa1034780 | Msa1037640 | 0.805072 | 1.592870e-49 | -8.615850e-47 |
| Msa1037640 | Msa1045140 | 0.829441 | 5.139369e-55 | -8.615850e-47 |
| Msa1037640 | Msa1072960 | 0.824504 | 7.786387e-54 | -8.615850e-47 |
| Msa1037640 | Msa1074370 | 0.800341 | 1.508411e-48 | -8.615850e-47 |
| Msa1037640 | Msa1074810 | 0.826039 | 3.375683e-54 | -8.615850e-47 |
| Msa1037640 | Msa1091520 | 0.804282 | 2.327831e-49 | -8.615850e-47 |
| Msa1037640 | Msa1106700 | 0.809830 | 1.558724e-50 | -8.615850e-47 |
| Msa1037640 | Msa1113340 | 0.866714 | 2.330012e-65 | -8.615850e-47 |
| Msa1037640 | Msa1119070 | 0.802005 | 6.887021e-49 | -8.615850e-47 |
| Msa1037640 | Msa1119170 | 0.803778 | 2.964091e-49 | -8.615850e-47 |
| Msa1037640 | Msa1124110 | 0.811353 | 7.305883e-51 | -8.615850e-47 |
| Msa1037640 | Msa1130280 | 0.908355 | 1.872529e-81 | -8.615850e-47 |
| Msa1037640 | Msa1143650 | 0.828948 | 6.766538e-55 | -8.615850e-47 |
| Msa1037640 | Msa1157870 | 0.806184 | 9.306728e-50 | -8.615850e-47 |
| Msa1037640 | Msa1160910 | 0.858806 | 6.398293e-63 | -8.615850e-47 |
| Msa1037640 | Msa1172350 | 0.816702 | 4.826277e-52 | -8.615850e-47 |
| Msa1037640 | Msa1173330 | 0.831097 | 2.024706e-55 | -8.615850e-47 |
| Msa1037640 | Msa1196100 | 0.822113 | 2.818582e-53 | -8.615850e-47 |
| Msa1037640 | Msa1196450 | 0.804438 | 2.159763e-49 | -8.615850e-47 |
| Msa1037640 | Msa1200370 | 0.817764 | 2.784179e-52 | -8.615850e-47 |
| Msa1037640 | Msa1223470 | 0.805566 | 1.254913e-49 | -8.615850e-47 |
| Msa1037640 | Msa1225250 | 0.800458 | 1.427844e-48 | -8.615850e-47 |
| Msa1037640 | Msa1225700 | 0.835193 | 1.935214e-56 | -8.615850e-47 |
| Msa1037640 | Msa1232710 | 0.861304 | 1.127271e-63 | -8.615850e-47 |
| Msa1037640 | Msa1240770 | 0.803823 | 2.899702e-49 | -8.615850e-47 |
| Msa1037640 | Msa1252190 | 0.839219 | 1.805867e-57 | -8.615850e-47 |
| Msa1037640 | Msa1256340 | 0.819252 | 1.280738e-52 | -8.615850e-47 |
| Msa1037640 | Msa1258710 | 0.815267 | 1.009222e-51 | -8.615850e-47 |
| Msa1037640 | Msa1292830 | 0.832525 | 8.996010e-56 | -8.615850e-47 |
| Msa1037640 | Msa1307570 | 0.843493 | 1.354406e-58 | -8.615850e-47 |
| Msa1037640 | Msa1313300 | 0.857679 | 1.385134e-62 | -8.615850e-47 |
| Msa1037640 | Msa1321340 | 0.808440 | 3.094027e-50 | -8.615850e-47 |
| Msa1037640 | Msa1336120 | 0.807137 | 5.854056e-50 | -8.615850e-47 |
| Msa1037640 | Msa1363260 | 0.810291 | 1.240139e-50 | -8.615850e-47 |
| Msa1037640 | Msa1369150 | 0.826504 | 2.615701e-54 | -8.615850e-47 |
| Msa1037640 | Msa1369550 | 0.819439 | 1.160499e-52 | -8.615850e-47 |
| Msa1037640 | Msa1418090 | 0.832828 | 7.563899e-56 | -8.615850e-47 |
| Msa1037640 | Msa1422420 | 0.802915 | 4.472986e-49 | -8.615850e-47 |
| Msa1037640 | Msa1440260 | -0.811677 | 6.210332e-51 | -8.615850e-47 |
| Msa1037640 | Msa1440960 | 0.812442 | 4.231144e-51 | -8.615850e-47 |
| Msa1037640 | Msa1449930 | 0.816106 | 6.561797e-52 | -8.615850e-47 |
| Msa1037640 | Msa1452930 | 0.805467 | 1.316287e-49 | -8.615850e-47 |
| Msa1037640 | Msa1459380 | 0.822072 | 2.879679e-53 | -8.615850e-47 |
| Msa0239190 | Msa1037640 | 0.812827 | 3.485754e-51 | -8.615850e-47 |
| Msa0255090 | Msa1037640 | 0.853955 | 1.696774e-61 | -8.615850e-47 |
| Msa0259380 | Msa1037640 | 0.858603 | 7.355643e-63 | -8.615850e-47 |
| Msa0264870 | Msa1037640 | 0.808528 | 2.962930e-50 | -8.615850e-47 |
| Msa0267110 | Msa1037640 | 0.845713 | 3.420530e-59 | -8.615850e-47 |
| Msa0283800 | Msa1037640 | 0.816744 | 4.721848e-52 | -8.615850e-47 |
| Msa0292330 | Msa1037640 | 0.811639 | 6.330948e-51 | -8.615850e-47 |
| Msa0292400 | Msa1037640 | 0.854153 | 1.487675e-61 | -8.615850e-47 |
| Msa0294160 | Msa1037640 | 0.850851 | 1.299876e-60 | -8.615850e-47 |
| Msa0301820 | Msa1037640 | 0.818541 | 1.857078e-52 | -8.615850e-47 |
| Msa0303390 | Msa1037640 | 0.807052 | 6.100637e-50 | -8.615850e-47 |
| Msa0307280 | Msa1037640 | 0.821856 | 3.232583e-53 | -8.615850e-47 |
| Msa0318700 | Msa1037640 | 0.840887 | 6.630854e-58 | -8.615850e-47 |
| Msa0321920 | Msa1037640 | 0.829395 | 5.271458e-55 | -8.615850e-47 |
| Msa0341330 | Msa1037640 | 0.827207 | 1.776698e-54 | -8.615850e-47 |
| Msa0349710 | Msa1037640 | 0.855269 | 7.067900e-62 | -8.615850e-47 |
| Msa0358310 | Msa1037640 | 0.813624 | 2.329571e-51 | -8.615850e-47 |
| Msa0484150 | Msa1037640 | 0.821925 | 3.116031e-53 | -8.615850e-47 |
| Msa0500380 | Msa1037640 | 0.823074 | 1.684294e-53 | -8.615850e-47 |
| Msa0518690 | Msa1037640 | 0.802359 | 5.823114e-49 | -8.615850e-47 |
| Msa0532070 | Msa1037640 | 0.855888 | 4.661794e-62 | -8.615850e-47 |
| Msa0569200 | Msa1037640 | 0.803489 | 3.402016e-49 | -8.615850e-47 |
| Msa0575920 | Msa1037640 | 0.800629 | 1.317733e-48 | -8.615850e-47 |
| Msa0869780 | Msa1037640 | 0.835591 | 1.535245e-56 | -8.615850e-47 |
| Msa0919770 | Msa1037640 | 0.810678 | 1.022700e-50 | -8.615850e-47 |
| Msa0945110 | Msa1037640 | 0.852627 | 4.076484e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037640 | MtrunA17_Chr7g0275431 | 95.781 | 474 | 0 | 2 | 1 | 454 | 1 | 474 | 0.0 | 932 |
| Msa1037640 | MtrunA17_Chr4g0007371 | 34.247 | 438 | 253 | 9 | 3 | 419 | 2 | 425 | 2.30e-77 | 248 |
| Msa1037640 | MtrunA17_Chr8g0386781 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 2.42e-77 | 248 |
| Msa1037640 | MtrunA17_Chr4g0008401 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 3.45e-77 | 247 |
| Msa1037640 | MtrunA17_Chr1g0203181 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 4.64e-77 | 247 |
| Msa1037640 | MtrunA17_Chr4g0008361 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 5.75e-77 | 247 |
| Msa1037640 | MtrunA17_Chr2g0292921 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 9.09e-77 | 246 |
| Msa1037640 | MtrunA17_Chr3g0142731 | 34.014 | 441 | 250 | 10 | 3 | 419 | 2 | 425 | 1.87e-76 | 246 |
| Msa1037640 | MtrunA17_Chr4g0051631 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 2.54e-76 | 245 |
| Msa1037640 | MtrunA17_Chr8g0393021 | 33.410 | 437 | 257 | 9 | 3 | 419 | 2 | 424 | 9.15e-76 | 244 |
| Msa1037640 | MtrunA17_Chr7g0255791 | 33.257 | 436 | 258 | 8 | 3 | 419 | 2 | 423 | 5.75e-75 | 241 |
| Msa1037640 | MtrunA17_Chr7g0253411 | 30.700 | 443 | 270 | 8 | 3 | 419 | 2 | 433 | 8.43e-65 | 215 |
| Msa1037640 | MtrunA17_Chr4g0054511 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 1.04e-62 | 209 |
| Msa1037640 | MtrunA17_Chr8g0378821 | 29.571 | 443 | 275 | 8 | 3 | 419 | 2 | 433 | 2.07e-62 | 209 |
| Msa1037640 | MtrunA17_Chr6g0461281 | 30.700 | 443 | 269 | 8 | 3 | 418 | 2 | 433 | 2.19e-62 | 209 |
| Msa1037640 | MtrunA17_Chr3g0140821 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 3.10e-62 | 208 |
| Msa1037640 | MtrunA17_Chr1g0206881 | 30.631 | 444 | 269 | 9 | 3 | 419 | 2 | 433 | 9.15e-62 | 207 |
| Msa1037640 | MtrunA17_Chr2g0300671 | 29.638 | 442 | 271 | 10 | 3 | 419 | 2 | 428 | 1.11e-48 | 172 |
| Msa1037640 | MtrunA17_Chr2g0300491 | 28.733 | 442 | 275 | 10 | 3 | 419 | 2 | 428 | 1.80e-46 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037640 | AT3G61650.1 | 92.144 | 471 | 17 | 2 | 1 | 451 | 1 | 471 | 0.0 | 898 |
| Msa1037640 | AT5G05620.1 | 91.507 | 471 | 20 | 2 | 1 | 451 | 1 | 471 | 0.0 | 893 |
| Msa1037640 | AT5G44340.1 | 34.404 | 436 | 253 | 8 | 3 | 419 | 2 | 423 | 3.15e-79 | 253 |
| Msa1037640 | AT4G20890.1 | 33.945 | 436 | 255 | 8 | 3 | 419 | 2 | 423 | 1.86e-78 | 251 |
| Msa1037640 | AT5G23860.2 | 33.716 | 436 | 256 | 8 | 3 | 419 | 2 | 423 | 2.35e-77 | 248 |
| Msa1037640 | AT5G23860.1 | 33.716 | 436 | 256 | 8 | 3 | 419 | 2 | 423 | 2.35e-77 | 248 |
| Msa1037640 | AT2G29550.1 | 34.174 | 436 | 254 | 8 | 3 | 419 | 2 | 423 | 2.85e-77 | 248 |
| Msa1037640 | AT1G75780.1 | 34.325 | 437 | 253 | 9 | 3 | 419 | 2 | 424 | 1.22e-76 | 246 |
| Msa1037640 | AT5G62690.1 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 3.83e-76 | 245 |
| Msa1037640 | AT5G62700.1 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 3.83e-76 | 245 |
| Msa1037640 | AT1G20010.1 | 34.325 | 437 | 253 | 9 | 3 | 419 | 2 | 424 | 5.02e-76 | 245 |
| Msa1037640 | AT5G12250.1 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 2.26e-75 | 243 |
| Msa1037640 | AT1G64740.1 | 29.345 | 443 | 276 | 8 | 3 | 419 | 2 | 433 | 1.92e-62 | 209 |
| Msa1037640 | AT5G19780.1 | 29.797 | 443 | 274 | 8 | 3 | 419 | 2 | 433 | 2.42e-62 | 209 |
| Msa1037640 | AT5G19770.1 | 29.797 | 443 | 274 | 8 | 3 | 419 | 2 | 433 | 2.42e-62 | 209 |
| Msa1037640 | AT4G14960.2 | 30.631 | 444 | 269 | 9 | 3 | 419 | 2 | 433 | 6.11e-62 | 208 |
| Msa1037640 | AT1G50010.1 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 8.03e-62 | 207 |
| Msa1037640 | AT1G04820.1 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 8.03e-62 | 207 |
| Msa1037640 | AT4G14960.1 | 32.249 | 369 | 220 | 7 | 3 | 349 | 2 | 362 | 4.14e-55 | 189 |
Find 124 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTCATACTACTGATTT+TGG | 0.178192 | 7_1:-74352937 | None:intergenic |
| CTTTCTGTAGTTGTCTAAAA+AGG | 0.228088 | 7_1:-74352536 | None:intergenic |
| TTTAGCTTGGCTAGCATCTT+TGG | 0.260486 | 7_1:-74351474 | None:intergenic |
| TTGGAGCCAAGGGTTATTAA+TGG | 0.274004 | 7_1:+74349028 | Msa1037640:CDS |
| AAGAGACATTATTGAGAGTT+TGG | 0.287511 | 7_1:+74352733 | Msa1037640:CDS |
| ATTCCCCATTTGATATAATC+TGG | 0.291812 | 7_1:-74352782 | None:intergenic |
| GTTCTATGTCATTCAATTGC+TGG | 0.305453 | 7_1:+74350313 | Msa1037640:CDS |
| CCGTGCTTTATTGATTGATT+TGG | 0.313450 | 7_1:+74349009 | Msa1037640:CDS |
| GTATATGGTTGGTTTGTTAT+TGG | 0.315591 | 7_1:+74353395 | Msa1037640:three_prime_UTR |
| ACCAGATCGGTATGGAATTC+TGG | 0.320154 | 7_1:+74348775 | Msa1037640:CDS |
| TATATCCTGTCATTAGAAAA+TGG | 0.320239 | 7_1:-74351072 | None:intergenic |
| TGTATTGTTTGTTTATCATT+TGG | 0.325442 | 7_1:+74353323 | Msa1037640:three_prime_UTR |
| GAGTTTGGTTGACGAATATA+AGG | 0.328007 | 7_1:+74352748 | Msa1037640:CDS |
| TCACTTGTCTCCATTTGGTT+AGG | 0.344251 | 7_1:-74350791 | None:intergenic |
| CCACATCACTTGTCTCCATT+TGG | 0.361567 | 7_1:-74350796 | None:intergenic |
| GTGGGGTCCTGCTAGTATTC+AGG | 0.370913 | 7_1:+74352104 | Msa1037640:CDS |
| TCTCATGATTGTAAAGATTA+CGG | 0.376121 | 7_1:-74349069 | None:intergenic |
| GGTCATTCAGAGTCTCTAAA+AGG | 0.387096 | 7_1:-74350730 | None:intergenic |
| AATATTGTCATTACCTGAGT+TGG | 0.398405 | 7_1:-74351536 | None:intergenic |
| AATCCCCAGATTATATCAAA+TGG | 0.399374 | 7_1:+74352777 | Msa1037640:CDS |
| CTGTGTGCAGTTTGAACATA+TGG | 0.400407 | 7_1:-74352248 | None:intergenic |
| AAGAAAAGCAGAGTGCAATT+TGG | 0.403095 | 7_1:+74348528 | Msa1037640:five_prime_UTR |
| CACTAACAATAGAATAGAAA+TGG | 0.404089 | 7_1:-74348667 | None:intergenic |
| GAATGTTGAAGAAGACATAA+TGG | 0.419103 | 7_1:+74350243 | Msa1037640:CDS |
| TCTCCTGTCATCATATTATT+CGG | 0.421502 | 7_1:-74352889 | None:intergenic |
| CTGGCAGGTGACGAGCAATA+AGG | 0.421976 | 7_1:+74353222 | Msa1037640:intron |
| ACAGGAGAGGGCAGTGCTGC+AGG | 0.426001 | 7_1:+74352904 | Msa1037640:CDS |
| TCCTTCTCAACTTATCGTAC+TGG | 0.427815 | 7_1:-74352507 | None:intergenic |
| CTGGCAGGCAAAGAATATTA+TGG | 0.438413 | 7_1:+74351433 | Msa1037640:intron |
| CACTTGTCTCCATTTGGTTA+GGG | 0.438949 | 7_1:-74350790 | None:intergenic |
| CATTCAATTGCTGGAGGGAC+AGG | 0.443706 | 7_1:+74350322 | Msa1037640:CDS |
| ATTGCTGGAGGGACAGGCTC+AGG | 0.449849 | 7_1:+74350328 | Msa1037640:CDS |
| GCCTCTGACAGTGGAACGTC+AGG | 0.450901 | 7_1:+74351096 | Msa1037640:CDS |
| GAATTTGTTTGAGCAAATGT+TGG | 0.452915 | 7_1:-74350941 | None:intergenic |
| TCCAGAATTCCATACCGATC+TGG | 0.455345 | 7_1:-74348776 | None:intergenic |
| ATCCCCAGATTATATCAAAT+GGG | 0.456784 | 7_1:+74352778 | Msa1037640:CDS |
| TGAATTCCATTAATAACCCT+TGG | 0.457529 | 7_1:-74349034 | None:intergenic |
| GGGCAGTGCTGCAGGATCAC+TGG | 0.459086 | 7_1:+74352912 | Msa1037640:CDS |
| GGCTCAGACATTTACTGAAA+AGG | 0.462594 | 7_1:-74352486 | None:intergenic |
| GATATAATCTGGGGATTCAC+AGG | 0.462754 | 7_1:-74352771 | None:intergenic |
| CAGACATCACAGTAGAAACT+AGG | 0.469353 | 7_1:-74350964 | None:intergenic |
| GTCATTAGAAAATGGCATCT+TGG | 0.471437 | 7_1:-74351064 | None:intergenic |
| CAGTGTGTTCCCTAACCAAA+TGG | 0.473529 | 7_1:+74350781 | Msa1037640:CDS |
| TTCCCCATTTGATATAATCT+GGG | 0.474962 | 7_1:-74352781 | None:intergenic |
| AAGTCATTATTCATGTATCC+TGG | 0.481660 | 7_1:-74351010 | None:intergenic |
| GCTAGTTAACTTTATTGAGT+GGG | 0.483561 | 7_1:+74352086 | Msa1037640:CDS |
| ATATTGTCATTACCTGAGTT+GGG | 0.490303 | 7_1:-74351535 | None:intergenic |
| AGAAAATGGCATCTTGGTGT+TGG | 0.491952 | 7_1:-74351058 | None:intergenic |
| CCTGAGTAGCGAAATCTTCG+AGG | 0.493935 | 7_1:-74348839 | None:intergenic |
| AGAATTTCTTTGTTTAGTAG+TGG | 0.496021 | 7_1:-74348632 | None:intergenic |
| AGTGTCAAAAGTGAGTTATA+TGG | 0.497975 | 7_1:-74350827 | None:intergenic |
| GAACACTTACAGCAAACATT+GGG | 0.502913 | 7_1:-74352561 | None:intergenic |
| CCTCGAAGATTTCGCTACTC+AGG | 0.506650 | 7_1:+74348839 | Msa1037640:CDS |
| GAGTTGGGTCAACCTCTCCT+TGG | 0.508239 | 7_1:-74351520 | None:intergenic |
| TTAGGTCAGCGGCCTTATGT+TGG | 0.508961 | 7_1:+74352441 | Msa1037640:intron |
| GATGGCAGTGACAGTCTTGA+GGG | 0.509882 | 7_1:+74350286 | Msa1037640:CDS |
| GGAACACTTACAGCAAACAT+TGG | 0.511079 | 7_1:-74352562 | None:intergenic |
| CAAATCAATCAATAAAGCAC+GGG | 0.513424 | 7_1:-74349008 | None:intergenic |
| GAATTGATATATATTTAGCT+TGG | 0.513871 | 7_1:-74351487 | None:intergenic |
| TCTTAATGCTGATTGTGTTG+TGG | 0.515975 | 7_1:+74350862 | Msa1037640:CDS |
| TAGTATGACTAGCCAACATA+AGG | 0.524461 | 7_1:-74352453 | None:intergenic |
| ACAACCACTCTTCGTTATCC+AGG | 0.524939 | 7_1:+74350992 | Msa1037640:CDS |
| GATCCGAATAATATGATGAC+AGG | 0.524991 | 7_1:+74352886 | Msa1037640:CDS |
| AGGATATACGCCTCTGACAG+TGG | 0.526564 | 7_1:+74351087 | Msa1037640:CDS |
| ACTATTGACACGAAGAATGC+TGG | 0.527775 | 7_1:+74353480 | Msa1037640:three_prime_UTR |
| ATTGATTGATTTGGAGCCAA+GGG | 0.534214 | 7_1:+74349018 | Msa1037640:CDS |
| AAAAGCAGAGTGCAATTTGG+CGG | 0.543842 | 7_1:+74348531 | Msa1037640:five_prime_UTR |
| TACAGTGGTATTCTGTACTA+CGG | 0.545684 | 7_1:-74353353 | None:intergenic |
| AGATTATATCAAATGGGGAA+TGG | 0.549783 | 7_1:+74352784 | Msa1037640:CDS |
| AGCTAGTTAACTTTATTGAG+TGG | 0.551550 | 7_1:+74352085 | Msa1037640:CDS |
| GGCGGTTGAAAAGTAGAGAG+TGG | 0.555759 | 7_1:+74348549 | Msa1037640:five_prime_UTR |
| GAGATAATCACACTTCAAGT+AGG | 0.563529 | 7_1:+74348741 | Msa1037640:CDS |
| AATAATATGATGACAGGAGA+GGG | 0.566951 | 7_1:+74352892 | Msa1037640:CDS |
| AGATGGCAGTGACAGTCTTG+AGG | 0.567168 | 7_1:+74350285 | Msa1037640:CDS |
| TATTGATTGATTTGGAGCCA+AGG | 0.567440 | 7_1:+74349017 | Msa1037640:CDS |
| CTAGTTAACTTTATTGAGTG+GGG | 0.569176 | 7_1:+74352087 | Msa1037640:CDS |
| TGTCATGAGGAGACTTCTGC+AGG | 0.571604 | 7_1:+74351344 | Msa1037640:CDS |
| ACCTGACGTTCCACTGTCAG+AGG | 0.573775 | 7_1:-74351097 | None:intergenic |
| ATGTGGAAACCAGATCGGTA+TGG | 0.576564 | 7_1:+74348767 | Msa1037640:CDS |
| CCAAATCAATCAATAAAGCA+CGG | 0.577216 | 7_1:-74349009 | None:intergenic |
| TTATGGTCTCTTCTTATGCA+CGG | 0.578464 | 7_1:+74351450 | Msa1037640:CDS |
| CTATGTCATTCAATTGCTGG+AGG | 0.585953 | 7_1:+74350316 | Msa1037640:CDS |
| TCCCCATTTGATATAATCTG+GGG | 0.589500 | 7_1:-74352780 | None:intergenic |
| TCGCATACCTGAATACTAGC+AGG | 0.597022 | 7_1:-74352111 | None:intergenic |
| GGTGACGAGCAATAAGGAAG+TGG | 0.600143 | 7_1:+74353228 | Msa1037640:intron |
| TTTGCTGTTTATTAGGTCAG+CGG | 0.602175 | 7_1:+74352430 | Msa1037640:intron |
| ATAACGAAGAGTGGTTGTGC+TGG | 0.603190 | 7_1:-74350987 | None:intergenic |
| AGGAGAGGTTGACCCAACTC+AGG | 0.603351 | 7_1:+74351523 | Msa1037640:CDS |
| ATATGTTCAAACTGCACACA+GGG | 0.604079 | 7_1:+74352250 | Msa1037640:CDS |
| TCAATTCTGAATATCATCCA+AGG | 0.606426 | 7_1:+74351503 | Msa1037640:CDS |
| AGACATCACAGTAGAAACTA+GGG | 0.607333 | 7_1:-74350963 | None:intergenic |
| GCCAGTACGATAAGTTGAGA+AGG | 0.608803 | 7_1:+74352506 | Msa1037640:CDS |
| GACATTTACTGAAAAGGTGA+CGG | 0.609104 | 7_1:-74352480 | None:intergenic |
| TCAAAAGTGAGTTATATGGT+TGG | 0.610753 | 7_1:-74350823 | None:intergenic |
| GAACATGGTATCAGCAAAGA+CGG | 0.611540 | 7_1:+74348813 | Msa1037640:CDS |
| AAGCAACTTTGTCTCGAACA+TGG | 0.614017 | 7_1:+74348798 | Msa1037640:CDS |
| AGGATACATGAATAATGACT+TGG | 0.619688 | 7_1:+74351012 | Msa1037640:CDS |
| ATGATTGACAGAGAAGCAGA+TGG | 0.626844 | 7_1:+74350268 | Msa1037640:CDS |
| TACATGAATAATGACTTGGT+TGG | 0.628614 | 7_1:+74351016 | Msa1037640:CDS |
| CATATGTTCAAACTGCACAC+AGG | 0.630458 | 7_1:+74352249 | Msa1037640:CDS |
| GTGTTGGAATCAAAGAGGCA+AGG | 0.634632 | 7_1:-74351042 | None:intergenic |
| TCCCCAGATTATATCAAATG+GGG | 0.635043 | 7_1:+74352779 | Msa1037640:CDS |
| GGACAATGTGGAAACCAGAT+CGG | 0.636980 | 7_1:+74348762 | Msa1037640:CDS |
| TTATATCAAATGGGGAATGG+AGG | 0.637675 | 7_1:+74352787 | Msa1037640:CDS |
| TGTGTGCAGTTTGAACATAT+GGG | 0.640655 | 7_1:-74352247 | None:intergenic |
| GTGTGCAGTTTGAACATATG+GGG | 0.646116 | 7_1:-74352246 | None:intergenic |
| TATGTCATTCAATTGCTGGA+GGG | 0.647449 | 7_1:+74350317 | Msa1037640:CDS |
| TGAAGTGTGATTATCTCTCG+AGG | 0.648860 | 7_1:-74348735 | None:intergenic |
| TCTGAATATCATCCAAGGAG+AGG | 0.649229 | 7_1:+74351508 | Msa1037640:CDS |
| TTGATTCATCAAACTCTGAG+AGG | 0.650287 | 7_1:-74352712 | None:intergenic |
| ACACTTCAAGTAGGACAATG+TGG | 0.658903 | 7_1:+74348750 | Msa1037640:CDS |
| GAATAATATGATGACAGGAG+AGG | 0.675044 | 7_1:+74352891 | Msa1037640:CDS |
| TCTTGGTGTTGGAATCAAAG+AGG | 0.676873 | 7_1:-74351047 | None:intergenic |
| ACACGAAGAATGCTGGCAAG+TGG | 0.679689 | 7_1:+74353487 | Msa1037640:three_prime_UTR |
| AGGTTCATGAGAGTTTGCAG+AGG | 0.683623 | 7_1:+74352049 | Msa1037640:intron |
| GGTTGAAAAGTAGAGAGTGG+TGG | 0.684934 | 7_1:+74348552 | Msa1037640:five_prime_UTR |
| CTGAAAACGAATAACTACAG+TGG | 0.686210 | 7_1:-74353368 | None:intergenic |
| GTATCCTGGATAACGAAGAG+TGG | 0.693788 | 7_1:-74350996 | None:intergenic |
| CCACTGTGCTTGATGTCATG+AGG | 0.693936 | 7_1:+74351331 | Msa1037640:CDS |
| AAATCAATCAATAAAGCACG+GGG | 0.701160 | 7_1:-74349007 | None:intergenic |
| AATGGAGACAAGTGATGTGG+TGG | 0.707586 | 7_1:+74350799 | Msa1037640:CDS |
| CCAAATGGAGACAAGTGATG+TGG | 0.730166 | 7_1:+74350796 | Msa1037640:CDS |
| CCTCATGACATCAAGCACAG+TGG | 0.730325 | 7_1:-74351331 | None:intergenic |
| AGTGGTATTCTGTACTACGG+CGG | 0.750261 | 7_1:-74353350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAAATAAAATTGCAA+GGG | - | chr7_1:74349960-74349979 | None:intergenic | 10.0% |
| !! | ATATAATAAATAAAATTGCA+AGG | - | chr7_1:74349961-74349980 | None:intergenic | 10.0% |
| !! | TATTTATTATATAACTAGAA+AGG | + | chr7_1:74349969-74349988 | Msa1037640:intron | 10.0% |
| !!! | AAATAATTTTAAAAAAACAC+AGG | - | chr7_1:74350649-74350668 | None:intergenic | 10.0% |
| !!! | ATAGTTTAACATATATTTTT+AGG | + | chr7_1:74352354-74352373 | Msa1037640:intron | 10.0% |
| !!! | TTTATATTTTTTCTTTGTAT+AGG | + | chr7_1:74352864-74352883 | Msa1037640:intron | 10.0% |
| !!! | TAGTGTTATTTTTTTCAAAA+AGG | + | chr7_1:74348685-74348704 | Msa1037640:five_prime_UTR | 15.0% |
| !! | TTGTAGAATATTTAATAACT+TGG | - | chr7_1:74349439-74349458 | None:intergenic | 15.0% |
| !!! | TCAACTATTTTAAAATGTAA+GGG | + | chr7_1:74350122-74350141 | Msa1037640:intron | 15.0% |
| !! | AAATTCTCAATAAAGTTAAA+GGG | - | chr7_1:74350417-74350436 | None:intergenic | 15.0% |
| !!! | AGATTAATTTCAATTTTTCA+AGG | - | chr7_1:74351860-74351879 | None:intergenic | 15.0% |
| !!! | TTAACATATATTTTTAGGAA+TGG | + | chr7_1:74352359-74352378 | Msa1037640:intron | 15.0% |
| !! | TGAAAATATTGATATGAAAT+TGG | - | chr7_1:74352586-74352605 | None:intergenic | 15.0% |
| !! | TCTAATAATAATATCTTACT+TGG | - | chr7_1:74352963-74352982 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTTATCTTGCTA+GGG | - | chr7_1:74353033-74353052 | None:intergenic | 15.0% |
| !!! | ATTATGAAAACTTTCTTTTT+TGG | + | chr7_1:74353267-74353286 | Msa1037640:three_prime_UTR | 15.0% |
| !!! | TTTTTTAGATACTATTTGTT+GGG | - | chr7_1:74353439-74353458 | None:intergenic | 15.0% |
| !!! | TTTTTTTAGATACTATTTGT+TGG | - | chr7_1:74353440-74353459 | None:intergenic | 15.0% |
| !! | AACTACAAATAACAAACAAA+TGG | - | chr7_1:74349255-74349274 | None:intergenic | 20.0% |
| !!! | GTCAACTATTTTAAAATGTA+AGG | + | chr7_1:74350121-74350140 | Msa1037640:intron | 20.0% |
| !! | AATTCTCAATAAAGTTAAAG+GGG | - | chr7_1:74350416-74350435 | None:intergenic | 20.0% |
| !! | CAAATTCTCAATAAAGTTAA+AGG | - | chr7_1:74350418-74350437 | None:intergenic | 20.0% |
| !! | GAATTGATATATATTTAGCT+TGG | - | chr7_1:74351490-74351509 | None:intergenic | 20.0% |
| !! | TCTTCTATTAAAAAATACCA+CGG | - | chr7_1:74351659-74351678 | None:intergenic | 20.0% |
| !!! | TGGTATTTTTTAATAGAAGA+TGG | + | chr7_1:74351659-74351678 | Msa1037640:intron | 20.0% |
| !! | ATCATAATACAGTTTAGAAA+GGG | - | chr7_1:74352008-74352027 | None:intergenic | 20.0% |
| !! | AATCATAATACAGTTTAGAA+AGG | - | chr7_1:74352009-74352028 | None:intergenic | 20.0% |
| !!! | TATGATTTTAATGTTCTCTA+TGG | + | chr7_1:74352022-74352041 | Msa1037640:intron | 20.0% |
| !! | GATAAGCATAAAAATTAAGA+CGG | - | chr7_1:74352300-74352319 | None:intergenic | 20.0% |
| !!! | TTTTTTATTTATCTTGCTAG+GGG | - | chr7_1:74353032-74353051 | None:intergenic | 20.0% |
| !!! | CATTTTTTATTTATCTTGCT+AGG | - | chr7_1:74353034-74353053 | None:intergenic | 20.0% |
| !! | TGAAATATGAATGTTAAATG+TGG | + | chr7_1:74353052-74353071 | Msa1037640:intron | 20.0% |
| !! | TGTATTGTTTGTTTATCATT+TGG | + | chr7_1:74353323-74353342 | Msa1037640:three_prime_UTR | 20.0% |
| !! | AGAATTTCTTTGTTTAGTAG+TGG | - | chr7_1:74348635-74348654 | None:intergenic | 25.0% |
| ! | CACTAACAATAGAATAGAAA+TGG | - | chr7_1:74348670-74348689 | None:intergenic | 25.0% |
| ! | TCTCATGATTGTAAAGATTA+CGG | - | chr7_1:74349072-74349091 | None:intergenic | 25.0% |
| !!! | AATATTTTTGTTGCTGATCA+TGG | + | chr7_1:74349091-74349110 | Msa1037640:intron | 25.0% |
| ! | CTTCACATGAAAAAACATAA+AGG | + | chr7_1:74349916-74349935 | Msa1037640:intron | 25.0% |
| ! | TGAAAAAACATAAAGGTTGA+AGG | + | chr7_1:74349923-74349942 | Msa1037640:intron | 25.0% |
| ! | GAAAAAACATAAAGGTTGAA+GGG | + | chr7_1:74349924-74349943 | Msa1037640:intron | 25.0% |
| ! | CATTTAAAAAACACAAAACC+AGG | - | chr7_1:74350056-74350075 | None:intergenic | 25.0% |
| ! | ATTCTCAATAAAGTTAAAGG+GGG | - | chr7_1:74350415-74350434 | None:intergenic | 25.0% |
| ! | ATTAATTTCCAGCAAATTGT+CGG | - | chr7_1:74350463-74350482 | None:intergenic | 25.0% |
| !!! | AAATTGCTTTTAACGCATAA+TGG | + | chr7_1:74350544-74350563 | Msa1037640:intron | 25.0% |
| ! | TCTTAAATATAGGAAGTCAA+AGG | - | chr7_1:74350594-74350613 | None:intergenic | 25.0% |
| ! | TTGACTTCCTATATTTAAGA+TGG | + | chr7_1:74350594-74350613 | Msa1037640:intron | 25.0% |
| ! | AGGTTATCCATCTTAAATAT+AGG | - | chr7_1:74350604-74350623 | None:intergenic | 25.0% |
| ! | GTGAGAAATATTTAAGCAAT+CGG | - | chr7_1:74350627-74350646 | None:intergenic | 25.0% |
| ! | TATATCCTGTCATTAGAAAA+TGG | - | chr7_1:74351075-74351094 | None:intergenic | 25.0% |
| !!! | TGCTCGAAATATCATTTTTA+TGG | - | chr7_1:74351144-74351163 | None:intergenic | 25.0% |
| ! | TCTTTACAGGACAAAAATTT+AGG | - | chr7_1:74351178-74351197 | None:intergenic | 25.0% |
| ! | TACGGAGGAAATATAAAATA+GGG | - | chr7_1:74351265-74351284 | None:intergenic | 25.0% |
| ! | TTACGGAGGAAATATAAAAT+AGG | - | chr7_1:74351266-74351285 | None:intergenic | 25.0% |
| ! | TGAAATTAATCTTCAACTGA+TGG | + | chr7_1:74351868-74351887 | Msa1037640:intron | 25.0% |
| ! | TTAATGTTCTCTATGGATTT+AGG | + | chr7_1:74352029-74352048 | Msa1037640:intron | 25.0% |
| ! | CATCAAACTAAATATGAAAG+AGG | - | chr7_1:74352181-74352200 | None:intergenic | 25.0% |
| ! | AAACAAAAAAATGAAAAGCG+AGG | - | chr7_1:74352827-74352846 | None:intergenic | 25.0% |
| !!! | TTTCTTCATACTACTGATTT+TGG | - | chr7_1:74352940-74352959 | None:intergenic | 25.0% |
| ! | ATTATTATTAGACCATAAGC+AGG | + | chr7_1:74352971-74352990 | Msa1037640:intron | 25.0% |
| !! | ATTAGTTTACTTTCCTTCTA+GGG | + | chr7_1:74353105-74353124 | Msa1037640:intron | 25.0% |
| ! | ACAAGAATCTTAGACATTTA+TGG | - | chr7_1:74353194-74353213 | None:intergenic | 25.0% |
| !!! | TGAAAACTTTCTTTTTTGGA+TGG | + | chr7_1:74353271-74353290 | Msa1037640:three_prime_UTR | 25.0% |
| !! | TTCGTTTTCAGTAATGTATA+TGG | + | chr7_1:74353380-74353399 | Msa1037640:three_prime_UTR | 25.0% |
| !! | TTTTCAGTAATGTATATGGT+TGG | + | chr7_1:74353384-74353403 | Msa1037640:three_prime_UTR | 25.0% |
| AAATCAATCAATAAAGCACG+GGG | - | chr7_1:74349010-74349029 | None:intergenic | 30.0% | |
| CAAATCAATCAATAAAGCAC+GGG | - | chr7_1:74349011-74349030 | None:intergenic | 30.0% | |
| CCAAATCAATCAATAAAGCA+CGG | - | chr7_1:74349012-74349031 | None:intergenic | 30.0% | |
| TGAATTCCATTAATAACCCT+TGG | - | chr7_1:74349037-74349056 | None:intergenic | 30.0% | |
| ATTAAAGTAAGCATACCTGA+TGG | - | chr7_1:74349150-74349169 | None:intergenic | 30.0% | |
| AGTTCTCAATAACATAAGTC+TGG | + | chr7_1:74349361-74349380 | Msa1037640:intron | 30.0% | |
| ! | GATTTTCTTTAGCATGCTAA+TGG | + | chr7_1:74349390-74349409 | Msa1037640:intron | 30.0% |
| TCAGCAAAATTAGTAGTGAA+TGG | + | chr7_1:74349469-74349488 | Msa1037640:intron | 30.0% | |
| AGAAGGAATAGAAATTAGAG+AGG | + | chr7_1:74349565-74349584 | Msa1037640:intron | 30.0% | |
| GAAGGAATAGAAATTAGAGA+GGG | + | chr7_1:74349566-74349585 | Msa1037640:intron | 30.0% | |
| AAATAAAGAAGGAAACCAAG+AGG | - | chr7_1:74349641-74349660 | None:intergenic | 30.0% | |
| GAGAACTGGAAAAATAAAGA+AGG | - | chr7_1:74349652-74349671 | None:intergenic | 30.0% | |
| ACTAGAGACTGAATACATAA+AGG | - | chr7_1:74349674-74349693 | None:intergenic | 30.0% | |
| ! | AGTGTCTTTTGCTTCTAAAT+TGG | + | chr7_1:74349691-74349710 | Msa1037640:intron | 30.0% |
| TCAAATTCAATCAATGACTC+TGG | + | chr7_1:74349840-74349859 | Msa1037640:intron | 30.0% | |
| AAAAACTACCGTATTATGGA+AGG | - | chr7_1:74350025-74350044 | None:intergenic | 30.0% | |
| GTACAAAAACTACCGTATTA+TGG | - | chr7_1:74350029-74350048 | None:intergenic | 30.0% | |
| ! | TGAGTGATGAGTTACATTTT+TGG | + | chr7_1:74350169-74350188 | Msa1037640:intron | 30.0% |
| TGGTTGTTAATATCTGATCA+GGG | + | chr7_1:74350217-74350236 | Msa1037640:intron | 30.0% | |
| GAATGTTGAAGAAGACATAA+TGG | + | chr7_1:74350243-74350262 | Msa1037640:CDS | 30.0% | |
| ! | TTTTTCCTAGTATTTGCCTT+AGG | + | chr7_1:74350365-74350384 | Msa1037640:intron | 30.0% |
| GAAACTTATATGATGTCCTA+AGG | - | chr7_1:74350384-74350403 | None:intergenic | 30.0% | |
| ATTAATCTTACACTCAAGAG+CGG | + | chr7_1:74350477-74350496 | Msa1037640:intron | 30.0% | |
| AGAAATATTTAAGCAATCGG+AGG | - | chr7_1:74350624-74350643 | None:intergenic | 30.0% | |
| GTTATTCCATTCATTTATGC+AGG | + | chr7_1:74350695-74350714 | Msa1037640:intron | 30.0% | |
| TCAAAAGTGAGTTATATGGT+TGG | - | chr7_1:74350826-74350845 | None:intergenic | 30.0% | |
| AGTGTCAAAAGTGAGTTATA+TGG | - | chr7_1:74350830-74350849 | None:intergenic | 30.0% | |
| ! | GAATTTGTTTGAGCAAATGT+TGG | - | chr7_1:74350944-74350963 | None:intergenic | 30.0% |
| AAGTCATTATTCATGTATCC+TGG | - | chr7_1:74351013-74351032 | None:intergenic | 30.0% | |
| AGGATACATGAATAATGACT+TGG | + | chr7_1:74351012-74351031 | Msa1037640:CDS | 30.0% | |
| !! | TACATGAATAATGACTTGGT+TGG | + | chr7_1:74351016-74351035 | Msa1037640:CDS | 30.0% |
| TTATGGAGAAAATGACACAA+AGG | - | chr7_1:74351127-74351146 | None:intergenic | 30.0% | |
| CAAAACAACAGAATCTTTAC+AGG | - | chr7_1:74351191-74351210 | None:intergenic | 30.0% | |
| !!! | ATTCTGTTGTTTTGTTGAAC+TGG | + | chr7_1:74351197-74351216 | Msa1037640:intron | 30.0% |
| ACGGAGGAAATATAAAATAG+GGG | - | chr7_1:74351264-74351283 | None:intergenic | 30.0% | |
| AATATCATCCGATCAGATTA+CGG | - | chr7_1:74351283-74351302 | None:intergenic | 30.0% | |
| TCAATTCTGAATATCATCCA+AGG | + | chr7_1:74351503-74351522 | Msa1037640:CDS | 30.0% | |
| ATATTGTCATTACCTGAGTT+GGG | - | chr7_1:74351538-74351557 | None:intergenic | 30.0% | |
| AATATTGTCATTACCTGAGT+TGG | - | chr7_1:74351539-74351558 | None:intergenic | 30.0% | |
| ACTCAGTTTCAGTTAACAAA+TGG | - | chr7_1:74351593-74351612 | None:intergenic | 30.0% | |
| AACTGAAACTGAGTTACAAA+AGG | + | chr7_1:74351599-74351618 | Msa1037640:intron | 30.0% | |
| AAATGAGCTCAACAAATGAA+TGG | - | chr7_1:74351632-74351651 | None:intergenic | 30.0% | |
| ! | ATTCATTTGTTGAGCTCATT+TGG | + | chr7_1:74351631-74351650 | Msa1037640:intron | 30.0% |
| !!! | ATTTCTTTTTCAGCTTCTAC+TGG | + | chr7_1:74351740-74351759 | Msa1037640:intron | 30.0% |
| ATGTGACGTTAATTAGAAGA+AGG | - | chr7_1:74351789-74351808 | None:intergenic | 30.0% | |
| AGCTAGTTAACTTTATTGAG+TGG | + | chr7_1:74352085-74352104 | Msa1037640:CDS | 30.0% | |
| GCTAGTTAACTTTATTGAGT+GGG | + | chr7_1:74352086-74352105 | Msa1037640:CDS | 30.0% | |
| CTAGTTAACTTTATTGAGTG+GGG | + | chr7_1:74352087-74352106 | Msa1037640:CDS | 30.0% | |
| !! | ACAATCTTATCTTGCTTTTC+TGG | + | chr7_1:74352201-74352220 | Msa1037640:intron | 30.0% |
| TAGGAATGGTTATTATTCTG+AGG | + | chr7_1:74352373-74352392 | Msa1037640:intron | 30.0% | |
| !! | AATGGTTATTATTCTGAGGT+TGG | + | chr7_1:74352377-74352396 | Msa1037640:intron | 30.0% |
| CTTTCTGTAGTTGTCTAAAA+AGG | - | chr7_1:74352539-74352558 | None:intergenic | 30.0% | |
| AAGAGACATTATTGAGAGTT+TGG | + | chr7_1:74352733-74352752 | Msa1037640:CDS | 30.0% | |
| AATCCCCAGATTATATCAAA+TGG | + | chr7_1:74352777-74352796 | Msa1037640:CDS | 30.0% | |
| ATCCCCAGATTATATCAAAT+GGG | + | chr7_1:74352778-74352797 | Msa1037640:CDS | 30.0% | |
| TTCCCCATTTGATATAATCT+GGG | - | chr7_1:74352784-74352803 | None:intergenic | 30.0% | |
| ATTCCCCATTTGATATAATC+TGG | - | chr7_1:74352785-74352804 | None:intergenic | 30.0% | |
| AGATTATATCAAATGGGGAA+TGG | + | chr7_1:74352784-74352803 | Msa1037640:CDS | 30.0% | |
| TCTCCTGTCATCATATTATT+CGG | - | chr7_1:74352892-74352911 | None:intergenic | 30.0% | |
| AATAATATGATGACAGGAGA+GGG | + | chr7_1:74352892-74352911 | Msa1037640:CDS | 30.0% | |
| ! | CATTAGTTTACTTTCCTTCT+AGG | + | chr7_1:74353104-74353123 | Msa1037640:intron | 30.0% |
| TCGTCAACATTACATTCAAA+CGG | - | chr7_1:74353142-74353161 | None:intergenic | 30.0% | |
| !!! | TTTCTTTTTTGGATGGTTTG+CGG | + | chr7_1:74353278-74353297 | Msa1037640:three_prime_UTR | 30.0% |
| !! | GTATATGGTTGGTTTGTTAT+TGG | + | chr7_1:74353395-74353414 | Msa1037640:three_prime_UTR | 30.0% |
| AAGAAAAGCAGAGTGCAATT+TGG | + | chr7_1:74348528-74348547 | Msa1037640:five_prime_UTR | 35.0% | |
| !!! | ATCTCTCGAGGCATTTTTTA+GGG | - | chr7_1:74348726-74348745 | None:intergenic | 35.0% |
| !!! | TATCTCTCGAGGCATTTTTT+AGG | - | chr7_1:74348727-74348746 | None:intergenic | 35.0% |
| GAGATAATCACACTTCAAGT+AGG | + | chr7_1:74348741-74348760 | Msa1037640:CDS | 35.0% | |
| ! | CCGTGCTTTATTGATTGATT+TGG | + | chr7_1:74349009-74349028 | Msa1037640:CDS | 35.0% |
| !! | TATTGATTGATTTGGAGCCA+AGG | + | chr7_1:74349017-74349036 | Msa1037640:CDS | 35.0% |
| !! | ATTGATTGATTTGGAGCCAA+GGG | + | chr7_1:74349018-74349037 | Msa1037640:CDS | 35.0% |
| ! | ATTTTTGTTGCTGATCATGG+TGG | + | chr7_1:74349094-74349113 | Msa1037640:intron | 35.0% |
| TTAGTAGTGAATGGACAGAT+AGG | + | chr7_1:74349478-74349497 | Msa1037640:intron | 35.0% | |
| AGTCACAATTCCTGTAATCA+AGG | + | chr7_1:74349510-74349529 | Msa1037640:intron | 35.0% | |
| GTCACAATTCCTGTAATCAA+GGG | + | chr7_1:74349511-74349530 | Msa1037640:intron | 35.0% | |
| ATATTCCTTCCCTTGATTAC+AGG | - | chr7_1:74349523-74349542 | None:intergenic | 35.0% | |
| AAGGGAAGGAATATGTGTAA+GGG | + | chr7_1:74349529-74349548 | Msa1037640:intron | 35.0% | |
| CTGAATACATAAAGGAGAAC+TGG | - | chr7_1:74349666-74349685 | None:intergenic | 35.0% | |
| AGTCAGTGTATAAACTAAGG+AGG | - | chr7_1:74349725-74349744 | None:intergenic | 35.0% | |
| TCCTTAGTTTATACACTGAC+TGG | + | chr7_1:74349724-74349743 | Msa1037640:intron | 35.0% | |
| ! | CCTTAGTTTATACACTGACT+GGG | + | chr7_1:74349725-74349744 | Msa1037640:intron | 35.0% |
| !! | ACAAGTGAAGCATTGTGTAA+TGG | - | chr7_1:74349812-74349831 | None:intergenic | 35.0% |
| ATCGTCAACCTTCCATAATA+CGG | + | chr7_1:74350014-74350033 | Msa1037640:intron | 35.0% | |
| ATAGTTGACTAAGACTCCTA+TGG | - | chr7_1:74350110-74350129 | None:intergenic | 35.0% | |
| TCAGATATTAACAACCACAC+AGG | - | chr7_1:74350214-74350233 | None:intergenic | 35.0% | |
| GTGGTTGTTAATATCTGATC+AGG | + | chr7_1:74350216-74350235 | Msa1037640:intron | 35.0% | |
| GTTCTATGTCATTCAATTGC+TGG | + | chr7_1:74350313-74350332 | Msa1037640:CDS | 35.0% | |
| TATGTCATTCAATTGCTGGA+GGG | + | chr7_1:74350317-74350336 | Msa1037640:CDS | 35.0% | |
| AACGCATAATGGCTAAGAAT+TGG | + | chr7_1:74350555-74350574 | Msa1037640:intron | 35.0% | |
| ACGCATAATGGCTAAGAATT+GGG | + | chr7_1:74350556-74350575 | Msa1037640:intron | 35.0% | |
| TCCATTCATTTATGCAGGTA+TGG | + | chr7_1:74350700-74350719 | Msa1037640:intron | 35.0% | |
| CCATTCATTTATGCAGGTAT+GGG | + | chr7_1:74350701-74350720 | Msa1037640:intron | 35.0% | |
| !!! | GAACCAGTTTTTTGCTGTAT+CGG | - | chr7_1:74350754-74350773 | None:intergenic | 35.0% |
| ! | TCTTAATGCTGATTGTGTTG+TGG | + | chr7_1:74350862-74350881 | Msa1037640:CDS | 35.0% |
| TGCACTTAATAGAATTGCTG+TGG | + | chr7_1:74350898-74350917 | Msa1037640:intron | 35.0% | |
| AGACATCACAGTAGAAACTA+GGG | - | chr7_1:74350966-74350985 | None:intergenic | 35.0% | |
| GTCATTAGAAAATGGCATCT+TGG | - | chr7_1:74351067-74351086 | None:intergenic | 35.0% | |
| !!! | AGATGCCATTTTCTAATGAC+AGG | + | chr7_1:74351067-74351086 | Msa1037640:CDS | 35.0% |
| GGAGGAAATATAAAATAGGG+GGG | - | chr7_1:74351262-74351281 | None:intergenic | 35.0% | |
| CGGAGGAAATATAAAATAGG+GGG | - | chr7_1:74351263-74351282 | None:intergenic | 35.0% | |
| TATTTCCTCCGTAATCTGAT+CGG | + | chr7_1:74351272-74351291 | Msa1037640:intron | 35.0% | |
| CTCTATTGACATTAAGTTCC+TGG | + | chr7_1:74351414-74351433 | Msa1037640:intron | 35.0% | |
| TTATGGTCTCTTCTTATGCA+CGG | + | chr7_1:74351450-74351469 | Msa1037640:CDS | 35.0% | |
| GACTTGAGTATAAGATTGCT+TGG | - | chr7_1:74351833-74351852 | None:intergenic | 35.0% | |
| TAATCTTCAACTGATGGTTG+TGG | + | chr7_1:74351874-74351893 | Msa1037640:intron | 35.0% | |
| !! | TCTTATCTTGCTTTTCTGGT+AGG | + | chr7_1:74352205-74352224 | Msa1037640:intron | 35.0% |
| ! | TTGAACATATGGGGATTTTC+TGG | - | chr7_1:74352240-74352259 | None:intergenic | 35.0% |
| TGTGTGCAGTTTGAACATAT+GGG | - | chr7_1:74352250-74352269 | None:intergenic | 35.0% | |
| ATATGTTCAAACTGCACACA+GGG | + | chr7_1:74352250-74352269 | Msa1037640:CDS | 35.0% | |
| CAATCAGATGTAATGCAGAA+AGG | - | chr7_1:74352326-74352345 | None:intergenic | 35.0% | |
| TGCATTACATCTGATTGCAT+TGG | + | chr7_1:74352329-74352348 | Msa1037640:intron | 35.0% | |
| TAATAAACAGCAAAGCACAC+AGG | - | chr7_1:74352424-74352443 | None:intergenic | 35.0% | |
| !! | TGTGTGCTTTGCTGTTTATT+AGG | + | chr7_1:74352423-74352442 | Msa1037640:intron | 35.0% |
| !! | TTTGCTGTTTATTAGGTCAG+CGG | + | chr7_1:74352430-74352449 | Msa1037640:intron | 35.0% |
| ! | TAGTATGACTAGCCAACATA+AGG | - | chr7_1:74352456-74352475 | None:intergenic | 35.0% |
| GACATTTACTGAAAAGGTGA+CGG | - | chr7_1:74352483-74352502 | None:intergenic | 35.0% | |
| GAACACTTACAGCAAACATT+GGG | - | chr7_1:74352564-74352583 | None:intergenic | 35.0% | |
| TTATCCTGTCCAATTGTCAT+TGG | - | chr7_1:74352689-74352708 | None:intergenic | 35.0% | |
| TTGATTCATCAAACTCTGAG+AGG | - | chr7_1:74352715-74352734 | None:intergenic | 35.0% | |
| GAGTTTGGTTGACGAATATA+AGG | + | chr7_1:74352748-74352767 | Msa1037640:CDS | 35.0% | |
| TCCCCAGATTATATCAAATG+GGG | + | chr7_1:74352779-74352798 | Msa1037640:CDS | 35.0% | |
| TCCCCATTTGATATAATCTG+GGG | - | chr7_1:74352783-74352802 | None:intergenic | 35.0% | |
| TTATATCAAATGGGGAATGG+AGG | + | chr7_1:74352787-74352806 | Msa1037640:CDS | 35.0% | |
| AAATGAAAAGCGAGGTTGAA+AGG | - | chr7_1:74352819-74352838 | None:intergenic | 35.0% | |
| GATCCGAATAATATGATGAC+AGG | + | chr7_1:74352886-74352905 | Msa1037640:CDS | 35.0% | |
| GAATAATATGATGACAGGAG+AGG | + | chr7_1:74352891-74352910 | Msa1037640:CDS | 35.0% | |
| !!! | TGGCTCATTTTGAGTTAGAA+AGG | - | chr7_1:74353174-74353193 | None:intergenic | 35.0% |
| AAGATTCTTGTGTACTTGAC+TGG | + | chr7_1:74353203-74353222 | Msa1037640:intron | 35.0% | |
| TACAGTGGTATTCTGTACTA+CGG | - | chr7_1:74353356-74353375 | None:intergenic | 35.0% | |
| CTGAAAACGAATAACTACAG+TGG | - | chr7_1:74353371-74353390 | None:intergenic | 35.0% | |
| AAAAGCAGAGTGCAATTTGG+CGG | + | chr7_1:74348531-74348550 | Msa1037640:five_prime_UTR | 40.0% | |
| !!! | GCATTTTTTAGGGTTTCGGA+GGG | - | chr7_1:74348716-74348735 | None:intergenic | 40.0% |
| !!! | CGAGGCATTTTTTAGGGTTT+CGG | - | chr7_1:74348720-74348739 | None:intergenic | 40.0% |
| TGAAGTGTGATTATCTCTCG+AGG | - | chr7_1:74348738-74348757 | None:intergenic | 40.0% | |
| ACACTTCAAGTAGGACAATG+TGG | + | chr7_1:74348750-74348769 | Msa1037640:CDS | 40.0% | |
| AAGCAACTTTGTCTCGAACA+TGG | + | chr7_1:74348798-74348817 | Msa1037640:CDS | 40.0% | |
| GAACATGGTATCAGCAAAGA+CGG | + | chr7_1:74348813-74348832 | Msa1037640:CDS | 40.0% | |
| TTGGAGCCAAGGGTTATTAA+TGG | + | chr7_1:74349028-74349047 | Msa1037640:CDS | 40.0% | |
| ! | AAGTCTTATCCGACTAAGTG+AGG | - | chr7_1:74349189-74349208 | None:intergenic | 40.0% |
| CAATTCCTGTAATCAAGGGA+AGG | + | chr7_1:74349515-74349534 | Msa1037640:intron | 40.0% | |
| CAAGGGAAGGAATATGTGTA+AGG | + | chr7_1:74349528-74349547 | Msa1037640:intron | 40.0% | |
| AAGGAATATGTGTAAGGGCA+AGG | + | chr7_1:74349534-74349553 | Msa1037640:intron | 40.0% | |
| GAAACCAAGAGGAGAAAGAT+CGG | - | chr7_1:74349630-74349649 | None:intergenic | 40.0% | |
| CCCAGTCAGTGTATAAACTA+AGG | - | chr7_1:74349728-74349747 | None:intergenic | 40.0% | |
| ! | TTTATACACTGACTGGGAGT+TGG | + | chr7_1:74349731-74349750 | Msa1037640:intron | 40.0% |
| ATAACTAGAAAGGCCTCAGA+TGG | + | chr7_1:74349979-74349998 | Msa1037640:intron | 40.0% | |
| AAGGTTGACGATATTCCTGT+CGG | - | chr7_1:74350006-74350025 | None:intergenic | 40.0% | |
| ! | GGTAGTTTTTGTACAGTACC+TGG | + | chr7_1:74350035-74350054 | Msa1037640:intron | 40.0% |
| ATCCTGATAGATCACTCCAT+AGG | + | chr7_1:74350091-74350110 | Msa1037640:intron | 40.0% | |
| GAATCAATTGTGAACCTGTG+TGG | + | chr7_1:74350197-74350216 | Msa1037640:intron | 40.0% | |
| ATGATTGACAGAGAAGCAGA+TGG | + | chr7_1:74350268-74350287 | Msa1037640:CDS | 40.0% | |
| CTATGTCATTCAATTGCTGG+AGG | + | chr7_1:74350316-74350335 | Msa1037640:CDS | 40.0% | |
| GATGTCCTAAGGCAAATACT+AGG | - | chr7_1:74350373-74350392 | None:intergenic | 40.0% | |
| CTTAAGAACCGACAATTTGC+TGG | + | chr7_1:74350452-74350471 | Msa1037640:intron | 40.0% | |
| TCAAGAGCGGAAATTGAACT+GGG | + | chr7_1:74350490-74350509 | Msa1037640:intron | 40.0% | |
| CCCATACCTGCATAAATGAA+TGG | - | chr7_1:74350704-74350723 | None:intergenic | 40.0% | |
| GGTCATTCAGAGTCTCTAAA+AGG | - | chr7_1:74350733-74350752 | None:intergenic | 40.0% | |
| TGACCGATACAGCAAAAAAC+TGG | + | chr7_1:74350748-74350767 | Msa1037640:CDS | 40.0% | |
| CACTTGTCTCCATTTGGTTA+GGG | - | chr7_1:74350793-74350812 | None:intergenic | 40.0% | |
| TCACTTGTCTCCATTTGGTT+AGG | - | chr7_1:74350794-74350813 | None:intergenic | 40.0% | |
| CAGACATCACAGTAGAAACT+AGG | - | chr7_1:74350967-74350986 | None:intergenic | 40.0% | |
| !! | TCTTGGTGTTGGAATCAAAG+AGG | - | chr7_1:74351050-74351069 | None:intergenic | 40.0% |
| ! | AGAAAATGGCATCTTGGTGT+TGG | - | chr7_1:74351061-74351080 | None:intergenic | 40.0% |
| ATCGGATGATATTTCCTTGC+AGG | + | chr7_1:74351290-74351309 | Msa1037640:intron | 40.0% | |
| ! | ACGAATTACATTAGCCTGCA+AGG | - | chr7_1:74351307-74351326 | None:intergenic | 40.0% |
| ATTGACATTAAGTTCCTGGC+AGG | + | chr7_1:74351418-74351437 | Msa1037640:intron | 40.0% | |
| CATAATATTCTTTGCCTGCC+AGG | - | chr7_1:74351435-74351454 | None:intergenic | 40.0% | |
| CTGGCAGGCAAAGAATATTA+TGG | + | chr7_1:74351433-74351452 | Msa1037640:intron | 40.0% | |
| !! | TTTAGCTTGGCTAGCATCTT+TGG | - | chr7_1:74351477-74351496 | None:intergenic | 40.0% |
| TCTGAATATCATCCAAGGAG+AGG | + | chr7_1:74351508-74351527 | Msa1037640:CDS | 40.0% | |
| GTGTGCAGTTTGAACATATG+GGG | - | chr7_1:74352249-74352268 | None:intergenic | 40.0% | |
| CTGTGTGCAGTTTGAACATA+TGG | - | chr7_1:74352251-74352270 | None:intergenic | 40.0% | |
| CATATGTTCAAACTGCACAC+AGG | + | chr7_1:74352249-74352268 | Msa1037640:CDS | 40.0% | |
| GGCTCAGACATTTACTGAAA+AGG | - | chr7_1:74352489-74352508 | None:intergenic | 40.0% | |
| TCCTTCTCAACTTATCGTAC+TGG | - | chr7_1:74352510-74352529 | None:intergenic | 40.0% | |
| GGAACACTTACAGCAAACAT+TGG | - | chr7_1:74352565-74352584 | None:intergenic | 40.0% | |
| CTGATGCTACCAATGACAAT+TGG | + | chr7_1:74352677-74352696 | Msa1037640:intron | 40.0% | |
| GATATAATCTGGGGATTCAC+AGG | - | chr7_1:74352774-74352793 | None:intergenic | 40.0% | |
| ACTCGAAGAAAACCTGCTTA+TGG | - | chr7_1:74352986-74353005 | None:intergenic | 40.0% | |
| !! | GCAATAAGGAAGTGGTTTTG+TGG | + | chr7_1:74353236-74353255 | Msa1037640:three_prime_UTR | 40.0% |
| !!! | ATAAGGAAGTGGTTTTGTGG+CGG | + | chr7_1:74353239-74353258 | Msa1037640:three_prime_UTR | 40.0% |
| ACTATTGACACGAAGAATGC+TGG | + | chr7_1:74353480-74353499 | Msa1037640:three_prime_UTR | 40.0% | |
| GGTTGAAAAGTAGAGAGTGG+TGG | + | chr7_1:74348552-74348571 | Msa1037640:five_prime_UTR | 45.0% | |
| !!! | GGCATTTTTTAGGGTTTCGG+AGG | - | chr7_1:74348717-74348736 | None:intergenic | 45.0% |
| GGACAATGTGGAAACCAGAT+CGG | + | chr7_1:74348762-74348781 | Msa1037640:CDS | 45.0% | |
| ATGTGGAAACCAGATCGGTA+TGG | + | chr7_1:74348767-74348786 | Msa1037640:CDS | 45.0% | |
| ACCAGATCGGTATGGAATTC+TGG | + | chr7_1:74348775-74348794 | Msa1037640:CDS | 45.0% | |
| TCCAGAATTCCATACCGATC+TGG | - | chr7_1:74348779-74348798 | None:intergenic | 45.0% | |
| ! | ACTATTTTACCCATGCTCGC+TGG | + | chr7_1:74348924-74348943 | Msa1037640:intron | 45.0% |
| TTTGTTGCTGATCATGGTGG+TGG | + | chr7_1:74349097-74349116 | Msa1037640:intron | 45.0% | |
| !! | TGGTGGTGCTGGTAACAATT+GGG | + | chr7_1:74349114-74349133 | Msa1037640:intron | 45.0% |
| TTATCCGACTAAGTGAGGTC+GGG | - | chr7_1:74349184-74349203 | None:intergenic | 45.0% | |
| CTTATCCGACTAAGTGAGGT+CGG | - | chr7_1:74349185-74349204 | None:intergenic | 45.0% | |
| AGGGCAAGGTGTATAAGAGA+AGG | + | chr7_1:74349548-74349567 | Msa1037640:intron | 45.0% | |
| ! | GAGAGGGTGTGAATTATGTG+AGG | + | chr7_1:74349582-74349601 | Msa1037640:intron | 45.0% |
| GGGTGTGAATTATGTGAGGA+TGG | + | chr7_1:74349586-74349605 | Msa1037640:intron | 45.0% | |
| CAATCAATGACTCTGGTGTC+TGG | + | chr7_1:74349847-74349866 | Msa1037640:intron | 45.0% | |
| CTCCTATGGAGTGATCTATC+AGG | - | chr7_1:74350096-74350115 | None:intergenic | 45.0% | |
| CTCAAGAGCGGAAATTGAAC+TGG | + | chr7_1:74350489-74350508 | Msa1037640:intron | 45.0% | |
| CAAGAGCGGAAATTGAACTG+GGG | + | chr7_1:74350491-74350510 | Msa1037640:intron | 45.0% | |
| AAGAGCGGAAATTGAACTGG+GGG | + | chr7_1:74350492-74350511 | Msa1037640:intron | 45.0% | |
| CAGTGTGTTCCCTAACCAAA+TGG | + | chr7_1:74350781-74350800 | Msa1037640:CDS | 45.0% | |
| CCACATCACTTGTCTCCATT+TGG | - | chr7_1:74350799-74350818 | None:intergenic | 45.0% | |
| CCAAATGGAGACAAGTGATG+TGG | + | chr7_1:74350796-74350815 | Msa1037640:CDS | 45.0% | |
| AATGGAGACAAGTGATGTGG+TGG | + | chr7_1:74350799-74350818 | Msa1037640:CDS | 45.0% | |
| ATAACGAAGAGTGGTTGTGC+TGG | - | chr7_1:74350990-74351009 | None:intergenic | 45.0% | |
| ACAACCACTCTTCGTTATCC+AGG | + | chr7_1:74350992-74351011 | Msa1037640:CDS | 45.0% | |
| GTATCCTGGATAACGAAGAG+TGG | - | chr7_1:74350999-74351018 | None:intergenic | 45.0% | |
| GTGTTGGAATCAAAGAGGCA+AGG | - | chr7_1:74351045-74351064 | None:intergenic | 45.0% | |
| ATCATCCGATCAGATTACGG+AGG | - | chr7_1:74351280-74351299 | None:intergenic | 45.0% | |
| AGGTTCATGAGAGTTTGCAG+AGG | + | chr7_1:74352049-74352068 | Msa1037640:intron | 45.0% | |
| TCGCATACCTGAATACTAGC+AGG | - | chr7_1:74352114-74352133 | None:intergenic | 45.0% | |
| GTATTCAGGTATGCGATCTG+TGG | + | chr7_1:74352118-74352137 | Msa1037640:intron | 45.0% | |
| ! | GCCAGTACGATAAGTTGAGA+AGG | + | chr7_1:74352506-74352525 | Msa1037640:CDS | 45.0% |
| TGCTGCATCTGTTCTGTACT+TGG | + | chr7_1:74352619-74352638 | Msa1037640:intron | 45.0% | |
| GCATCTGTTCTGTACTTGGA+TGG | + | chr7_1:74352623-74352642 | Msa1037640:intron | 45.0% | |
| GCTACCAATGACAATTGGAC+AGG | + | chr7_1:74352682-74352701 | Msa1037640:intron | 45.0% | |
| ATCAAATGGGGAATGGAGGT+AGG | + | chr7_1:74352791-74352810 | Msa1037640:intron | 45.0% | |
| TTCTTGTGTACTTGACTGGC+AGG | + | chr7_1:74353207-74353226 | Msa1037640:intron | 45.0% | |
| AGTGGTATTCTGTACTACGG+CGG | - | chr7_1:74353353-74353372 | None:intergenic | 45.0% | |
| GGCGGTTGAAAAGTAGAGAG+TGG | + | chr7_1:74348549-74348568 | Msa1037640:five_prime_UTR | 50.0% | |
| CCTGAGTAGCGAAATCTTCG+AGG | - | chr7_1:74348842-74348861 | None:intergenic | 50.0% | |
| CCTCGAAGATTTCGCTACTC+AGG | + | chr7_1:74348839-74348858 | Msa1037640:CDS | 50.0% | |
| !! | GTGGTGGTGCTGGTAACAAT+TGG | + | chr7_1:74349113-74349132 | Msa1037640:intron | 50.0% |
| ! | GCTGGTAACAATTGGGCTAG+TGG | + | chr7_1:74349121-74349140 | Msa1037640:intron | 50.0% |
| ACTAAGTGAGGTCGGGTACA+TGG | - | chr7_1:74349177-74349196 | None:intergenic | 50.0% | |
| TGTACCCGACCTCACTTAGT+CGG | + | chr7_1:74349177-74349196 | Msa1037640:intron | 50.0% | |
| CAAGAGGAGAAAGATCGGAG+AGG | - | chr7_1:74349625-74349644 | None:intergenic | 50.0% | |
| CTCTCCGATCTTTCTCCTCT+TGG | + | chr7_1:74349623-74349642 | Msa1037640:intron | 50.0% | |
| GACTCTGGTGTCTGGTCTAT+TGG | + | chr7_1:74349855-74349874 | Msa1037640:intron | 50.0% | |
| TATTCCTGTCGGACCATCTG+AGG | - | chr7_1:74349995-74350014 | None:intergenic | 50.0% | |
| AGATGGCAGTGACAGTCTTG+AGG | + | chr7_1:74350285-74350304 | Msa1037640:CDS | 50.0% | |
| GATGGCAGTGACAGTCTTGA+GGG | + | chr7_1:74350286-74350305 | Msa1037640:CDS | 50.0% | |
| CATTCAATTGCTGGAGGGAC+AGG | + | chr7_1:74350322-74350341 | Msa1037640:CDS | 50.0% | |
| AGAGCGGAAATTGAACTGGG+GGG | + | chr7_1:74350493-74350512 | Msa1037640:intron | 50.0% | |
| AGGATATACGCCTCTGACAG+TGG | + | chr7_1:74351087-74351106 | Msa1037640:CDS | 50.0% | |
| CCTCATGACATCAAGCACAG+TGG | - | chr7_1:74351334-74351353 | None:intergenic | 50.0% | |
| CCACTGTGCTTGATGTCATG+AGG | + | chr7_1:74351331-74351350 | Msa1037640:CDS | 50.0% | |
| TGTCATGAGGAGACTTCTGC+AGG | + | chr7_1:74351344-74351363 | Msa1037640:CDS | 50.0% | |
| GTTGAGCTCATTTGGTACCG+TGG | + | chr7_1:74351639-74351658 | Msa1037640:intron | 50.0% | |
| ! | GAGGCAAAAGTATGCAGCTG+TGG | - | chr7_1:74352162-74352181 | None:intergenic | 50.0% |
| GTTCAAACTGCACACAGGGT+AGG | + | chr7_1:74352254-74352273 | Msa1037640:intron | 50.0% | |
| ! | TTAGGTCAGCGGCCTTATGT+TGG | + | chr7_1:74352441-74352460 | Msa1037640:intron | 50.0% |
| GGTGACGAGCAATAAGGAAG+TGG | + | chr7_1:74353228-74353247 | Msa1037640:intron | 50.0% | |
| ACACGAAGAATGCTGGCAAG+TGG | + | chr7_1:74353487-74353506 | Msa1037640:three_prime_UTR | 50.0% | |
| !! | TTGGGCTAGTGGCTACCATC+AGG | + | chr7_1:74349132-74349151 | Msa1037640:intron | 55.0% |
| AGTGAGGTCGGGTACATGGA+TGG | - | chr7_1:74349173-74349192 | None:intergenic | 55.0% | |
| GAGCGGAAATTGAACTGGGG+GGG | + | chr7_1:74350494-74350513 | Msa1037640:intron | 55.0% | |
| ACCTGACGTTCCACTGTCAG+AGG | - | chr7_1:74351100-74351119 | None:intergenic | 55.0% | |
| GAGTTGGGTCAACCTCTCCT+TGG | - | chr7_1:74351523-74351542 | None:intergenic | 55.0% | |
| AGGAGAGGTTGACCCAACTC+AGG | + | chr7_1:74351523-74351542 | Msa1037640:CDS | 55.0% | |
| GTGGGGTCCTGCTAGTATTC+AGG | + | chr7_1:74352104-74352123 | Msa1037640:CDS | 55.0% | |
| GGCACAAGCACAACCCTAGA+AGG | - | chr7_1:74353121-74353140 | None:intergenic | 55.0% | |
| CTGGCAGGTGACGAGCAATA+AGG | + | chr7_1:74353222-74353241 | Msa1037640:intron | 55.0% | |
| !! | GCTGATCATGGTGGTGGTGC+TGG | + | chr7_1:74349103-74349122 | Msa1037640:intron | 60.0% |
| AAGGCCTCAGATGGTCCGAC+AGG | + | chr7_1:74349988-74350007 | Msa1037640:intron | 60.0% | |
| ATTGCTGGAGGGACAGGCTC+AGG | + | chr7_1:74350328-74350347 | Msa1037640:CDS | 60.0% | |
| GCCTCTGACAGTGGAACGTC+AGG | + | chr7_1:74351096-74351115 | Msa1037640:CDS | 60.0% | |
| ! | TACCCATGCTCGCTGGCTGC+AGG | + | chr7_1:74348931-74348950 | Msa1037640:intron | 65.0% |
| ! | ACCCATGCTCGCTGGCTGCA+GGG | + | chr7_1:74348932-74348951 | Msa1037640:intron | 65.0% |
| TCCCTGCAGCCAGCGAGCAT+GGG | - | chr7_1:74348936-74348955 | None:intergenic | 65.0% | |
| ACAGGAGAGGGCAGTGCTGC+AGG | + | chr7_1:74352904-74352923 | Msa1037640:CDS | 65.0% | |
| GGGCAGTGCTGCAGGATCAC+TGG | + | chr7_1:74352912-74352931 | Msa1037640:CDS | 65.0% | |
| CTCCCTGCAGCCAGCGAGCA+TGG | - | chr7_1:74348937-74348956 | None:intergenic | 70.0% | |
| ! | CATGCTCGCTGGCTGCAGGG+AGG | + | chr7_1:74348935-74348954 | Msa1037640:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 74348524 | 74353514 | 74348524 | ID=Msa1037640;Name=Msa1037640 |
| chr7_1 | mRNA | 74348524 | 74353514 | 74348524 | ID=Msa1037640-mRNA-1;Parent=Msa1037640;Name=Msa1037640-mRNA-1;_AED=0.06;_eAED=0.06;_QI=208|0.83|0.76|1|0.66|0.46|13|295|454 |
| chr7_1 | exon | 74348524 | 74348860 | 74348524 | ID=Msa1037640-mRNA-1:exon:18673;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74348953 | 74349099 | 74348953 | ID=Msa1037640-mRNA-1:exon:18674;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74350238 | 74350349 | 74350238 | ID=Msa1037640-mRNA-1:exon:18675;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74350717 | 74350916 | 74350717 | ID=Msa1037640-mRNA-1:exon:18676;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74350923 | 74351117 | 74350923 | ID=Msa1037640-mRNA-1:exon:18677;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74351312 | 74351365 | 74351312 | ID=Msa1037640-mRNA-1:exon:18678;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74351440 | 74351544 | 74351440 | ID=Msa1037640-mRNA-1:exon:18679;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74352051 | 74352125 | 74352051 | ID=Msa1037640-mRNA-1:exon:18680;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74352227 | 74352271 | 74352227 | ID=Msa1037640-mRNA-1:exon:18681;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74352445 | 74352573 | 74352445 | ID=Msa1037640-mRNA-1:exon:18682;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74352704 | 74352808 | 74352704 | ID=Msa1037640-mRNA-1:exon:18683;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74352886 | 74352963 | 74352886 | ID=Msa1037640-mRNA-1:exon:18684;Parent=Msa1037640-mRNA-1 |
| chr7_1 | exon | 74353229 | 74353514 | 74353229 | ID=Msa1037640-mRNA-1:exon:18685;Parent=Msa1037640-mRNA-1 |
| chr7_1 | five_prime_UTR | 74348524 | 74348731 | 74348524 | ID=Msa1037640-mRNA-1:five_prime_utr;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74348732 | 74348860 | 74348732 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74348953 | 74349099 | 74348953 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74350238 | 74350349 | 74350238 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74350717 | 74350916 | 74350717 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74350923 | 74351117 | 74350923 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74351312 | 74351365 | 74351312 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74351440 | 74351544 | 74351440 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74352051 | 74352125 | 74352051 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74352227 | 74352271 | 74352227 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74352445 | 74352573 | 74352445 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74352704 | 74352808 | 74352704 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | CDS | 74352886 | 74352954 | 74352886 | ID=Msa1037640-mRNA-1:cds;Parent=Msa1037640-mRNA-1 |
| chr7_1 | three_prime_UTR | 74352955 | 74352963 | 74352955 | ID=Msa1037640-mRNA-1:three_prime_utr;Parent=Msa1037640-mRNA-1 |
| chr7_1 | three_prime_UTR | 74353229 | 74353514 | 74353229 | ID=Msa1037640-mRNA-1:three_prime_utr;Parent=Msa1037640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
