AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1169040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169040 MtrunA17_Chr7g0264091 95.455 110 5 0 1 110 1 110 4.07e-72 209
Msa1169040 MtrunA17_Chr1g0181281 81.308 107 20 0 3 109 5 111 3.51e-55 167
Msa1169040 MtrunA17_Chr7g0215731 55.046 109 49 0 1 109 127 235 9.76e-36 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169040 AT4G23710.1 69.903 103 31 0 8 110 4 106 2.29e-44 140
Msa1169040 AT3G01390.4 73.636 110 29 0 1 110 1 110 5.26e-42 134
Msa1169040 AT3G01390.2 73.636 110 29 0 1 110 1 110 5.26e-42 134
Msa1169040 AT3G01390.1 73.636 110 29 0 1 110 1 110 5.26e-42 134
Msa1169040 AT3G01390.3 73.636 110 29 0 1 110 1 110 5.26e-42 134
Msa1169040 AT4G25950.1 54.206 107 47 1 1 107 1 105 1.12e-33 113
Msa1169040 AT4G25950.2 58.462 65 27 0 1 65 1 65 3.68e-19 75.5

Find 38 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGAGGCTAGTAGAATTTC+GGG 0.229288 7_4:+61980788 Msa1169040:CDS
TTTGAATAATGTTGGATATA+TGG 0.256445 7_4:-61980987 None:intergenic
CTTTGATTATGATTACTTTC+TGG 0.280460 7_4:+61979993 Msa1169040:five_prime_UTR
GACCGAGGCTAGTAGAATTT+CGG 0.295846 7_4:+61980787 Msa1169040:CDS
CACTAAACATCGAGCTCATT+TGG 0.305668 7_4:+61980566 Msa1169040:CDS
TAGACTTCTTGGTGATATAT+TGG 0.313746 7_4:+61980857 Msa1169040:exon
TTATTGATCACTCTAGATTC+TGG 0.327174 7_4:+61980918 Msa1169040:three_prime_UTR
TGCAGATAAGATTCTTGTTT+AGG 0.332158 7_4:+61980941 Msa1169040:three_prime_UTR
CATATTATCCTACCAAATCT+TGG 0.360208 7_4:+61981168 Msa1169040:three_prime_UTR
AGGTGGAATTCAACAATTAT+TGG 0.361539 7_4:+61980082 Msa1169040:CDS
CAAGAGGTAGAAGCTTTGTT+TGG 0.367408 7_4:+61981229 Msa1169040:three_prime_UTR
AATTCCACCTTGACTGTTGT+TGG 0.367869 7_4:-61980069 None:intergenic
CCGTGAAGAACTAGACTTCT+TGG 0.375885 7_4:+61980846 Msa1169040:exon
ATACAGAGCAGTGGAGATTC+TGG 0.378837 7_4:+61980710 Msa1169040:intron
CTTGTTTAGGTTATGATGCT+TGG 0.386475 7_4:+61980954 Msa1169040:three_prime_UTR
CTGAAATAATGATCTATGAA+TGG 0.407451 7_4:-61981095 None:intergenic
GAATTCATCTCTGTTGTTGA+AGG 0.412780 7_4:+61979969 None:intergenic
AGCCAAAGAAGAGGCTGAAA+AGG 0.415151 7_4:+61980539 Msa1169040:CDS
AAAGAATAAACCATTCATTC+CGG 0.425856 7_4:-61981133 None:intergenic
TGAAATAATGATCTATGAAT+GGG 0.458332 7_4:-61981094 None:intergenic
CCAAGAAGTCTAGTTCTTCA+CGG 0.458780 7_4:-61980846 None:intergenic
TTGAATAATGCCGGAATGAA+TGG 0.483249 7_4:+61981123 Msa1169040:three_prime_UTR
CCCCGAAATTCTACTAGCCT+CGG 0.490166 7_4:-61980789 None:intergenic
TAGCCTCGGTCTTCAGCTGA+TGG 0.496170 7_4:-61980775 None:intergenic
ATGTATCGCCGTTTCAAAAG+AGG 0.498633 7_4:+61981052 Msa1169040:three_prime_UTR
TCAGTTGTATTGAATAATGC+CGG 0.507531 7_4:+61981114 Msa1169040:three_prime_UTR
TAGATGTAAACGTGGGCAAG+AGG 0.616452 7_4:+61981213 Msa1169040:three_prime_UTR
ATGGCATCCAACAACAGTCA+AGG 0.643899 7_4:+61980062 Msa1169040:CDS
GATCCATCAGCTGAAGACCG+AGG 0.646369 7_4:+61980772 Msa1169040:CDS
CTTCAATGAATACAGAGCAG+TGG 0.651983 7_4:+61980701 Msa1169040:intron
GTTGAAACAAGCCAAAGAAG+AGG 0.654824 7_4:+61980530 Msa1169040:CDS
GCATCCAACAACAGTCAAGG+TGG 0.657348 7_4:+61980065 Msa1169040:CDS
CTGTTTCTAGATGTAAACGT+GGG 0.658759 7_4:+61981206 Msa1169040:three_prime_UTR
CGAGGCTAGTAGAATTTCGG+GGG 0.666069 7_4:+61980790 Msa1169040:CDS
TCTGTTTCTAGATGTAAACG+TGG 0.672177 7_4:+61981205 Msa1169040:three_prime_UTR
CCGAGGCTAGTAGAATTTCG+GGG 0.697212 7_4:+61980789 Msa1169040:CDS
GATTTGGTAGGATAATATGA+CGG 0.709023 7_4:-61981164 None:intergenic
CTGCTGAACAAGAAGCACAG+CGG 0.743446 7_4:+61980105 Msa1169040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAGTATAATTAAAAAGT+GGG - chr7_4:61980406-61980425 None:intergenic 15.0%
!! AAAACAGTATAATTAAAAAG+TGG - chr7_4:61980407-61980426 None:intergenic 15.0%
!!! TAATGAATTTTGAATAATGT+TGG - chr7_4:61980998-61981017 None:intergenic 15.0%
!! AAACAGTATAATTAAAAAGT+GGG - chr7_4:61980406-61980425 None:intergenic 15.0%
!! AAAACAGTATAATTAAAAAG+TGG - chr7_4:61980407-61980426 None:intergenic 15.0%
!!! TAATGAATTTTGAATAATGT+TGG - chr7_4:61980998-61981017 None:intergenic 15.0%
!!! AACTTATTTTTATCACAGAA+TGG + chr7_4:61980043-61980062 Msa1169040:exon 20.0%
!! GAGAAATAAAAAATGAAGAT+TGG - chr7_4:61980162-61980181 None:intergenic 20.0%
!! TTTGAATAATGTTGGATATA+TGG - chr7_4:61980990-61981009 None:intergenic 20.0%
!! TGAAATAATGATCTATGAAT+GGG - chr7_4:61981097-61981116 None:intergenic 20.0%
!!! AACTTATTTTTATCACAGAA+TGG + chr7_4:61980043-61980062 Msa1169040:exon 20.0%
!! GAGAAATAAAAAATGAAGAT+TGG - chr7_4:61980162-61980181 None:intergenic 20.0%
!! TTTGAATAATGTTGGATATA+TGG - chr7_4:61980990-61981009 None:intergenic 20.0%
!! TGAAATAATGATCTATGAAT+GGG - chr7_4:61981097-61981116 None:intergenic 20.0%
! CTTTGATTATGATTACTTTC+TGG + chr7_4:61979993-61980012 Msa1169040:five_prime_UTR 25.0%
! AACAATCTGCTAACATAAAA+TGG - chr7_4:61980223-61980242 None:intergenic 25.0%
! GTTAAAAGATAAACACAAGA+AGG - chr7_4:61980260-61980279 None:intergenic 25.0%
!!! TTTTAACTTTCACATGAAAC+TGG + chr7_4:61980273-61980292 Msa1169040:intron 25.0%
!! TTTAACTTTCACATGAAACT+GGG + chr7_4:61980274-61980293 Msa1169040:intron 25.0%
! TTTGTTCTATGATATATACG+AGG - chr7_4:61980343-61980362 None:intergenic 25.0%
! AGTATAATTAAAAAGTGGGA+GGG - chr7_4:61980402-61980421 None:intergenic 25.0%
! ATTCAGCATAATTACATAAC+TGG - chr7_4:61980452-61980471 None:intergenic 25.0%
! TACTGTTAGAAAAATATGCT+AGG + chr7_4:61980508-61980527 Msa1169040:intron 25.0%
!!! TTTTCAAAACAAAGTATCAG+CGG + chr7_4:61980596-61980615 Msa1169040:CDS 25.0%
! AAGCTTATAATGAGATAGAA+CGG - chr7_4:61980672-61980691 None:intergenic 25.0%
! CTGAAATAATGATCTATGAA+TGG - chr7_4:61981098-61981117 None:intergenic 25.0%
! AAAGAATAAACCATTCATTC+CGG - chr7_4:61981136-61981155 None:intergenic 25.0%
! CTTTGATTATGATTACTTTC+TGG + chr7_4:61979993-61980012 Msa1169040:five_prime_UTR 25.0%
! AACAATCTGCTAACATAAAA+TGG - chr7_4:61980223-61980242 None:intergenic 25.0%
! GTTAAAAGATAAACACAAGA+AGG - chr7_4:61980260-61980279 None:intergenic 25.0%
!!! TTTTAACTTTCACATGAAAC+TGG + chr7_4:61980273-61980292 Msa1169040:intron 25.0%
!! TTTAACTTTCACATGAAACT+GGG + chr7_4:61980274-61980293 Msa1169040:intron 25.0%
! TTTGTTCTATGATATATACG+AGG - chr7_4:61980343-61980362 None:intergenic 25.0%
! AGTATAATTAAAAAGTGGGA+GGG - chr7_4:61980402-61980421 None:intergenic 25.0%
! ATTCAGCATAATTACATAAC+TGG - chr7_4:61980452-61980471 None:intergenic 25.0%
! TACTGTTAGAAAAATATGCT+AGG + chr7_4:61980508-61980527 Msa1169040:intron 25.0%
!!! TTTTCAAAACAAAGTATCAG+CGG + chr7_4:61980596-61980615 Msa1169040:CDS 25.0%
! AAGCTTATAATGAGATAGAA+CGG - chr7_4:61980672-61980691 None:intergenic 25.0%
! CTGAAATAATGATCTATGAA+TGG - chr7_4:61981098-61981117 None:intergenic 25.0%
! AAAGAATAAACCATTCATTC+CGG - chr7_4:61981136-61981155 None:intergenic 25.0%
AGGTGGAATTCAACAATTAT+TGG + chr7_4:61980082-61980101 Msa1169040:CDS 30.0%
ATTGTGAATGCTGCAAAAAA+TGG + chr7_4:61980128-61980147 Msa1169040:CDS 30.0%
CAGTATAATTAAAAAGTGGG+AGG - chr7_4:61980403-61980422 None:intergenic 30.0%
AGCATAATTACATAACTGGT+TGG - chr7_4:61980448-61980467 None:intergenic 30.0%
! TTATCGACTGCAGTAATAAA+TGG + chr7_4:61980627-61980646 Msa1169040:intron 30.0%
! TAGACTTCTTGGTGATATAT+TGG + chr7_4:61980857-61980876 Msa1169040:exon 30.0%
TTATTGATCACTCTAGATTC+TGG + chr7_4:61980918-61980937 Msa1169040:three_prime_UTR 30.0%
! TGCAGATAAGATTCTTGTTT+AGG + chr7_4:61980941-61980960 Msa1169040:three_prime_UTR 30.0%
!! AATACACTCCTCTTTTGAAA+CGG - chr7_4:61981063-61981082 None:intergenic 30.0%
TCAGTTGTATTGAATAATGC+CGG + chr7_4:61981114-61981133 Msa1169040:three_prime_UTR 30.0%
! GATTTGGTAGGATAATATGA+CGG - chr7_4:61981167-61981186 None:intergenic 30.0%
CATATTATCCTACCAAATCT+TGG + chr7_4:61981168-61981187 Msa1169040:three_prime_UTR 30.0%
AGGTGGAATTCAACAATTAT+TGG + chr7_4:61980082-61980101 Msa1169040:CDS 30.0%
ATTGTGAATGCTGCAAAAAA+TGG + chr7_4:61980128-61980147 Msa1169040:CDS 30.0%
CAGTATAATTAAAAAGTGGG+AGG - chr7_4:61980403-61980422 None:intergenic 30.0%
AGCATAATTACATAACTGGT+TGG - chr7_4:61980448-61980467 None:intergenic 30.0%
! TTATCGACTGCAGTAATAAA+TGG + chr7_4:61980627-61980646 Msa1169040:intron 30.0%
! TAGACTTCTTGGTGATATAT+TGG + chr7_4:61980857-61980876 Msa1169040:exon 30.0%
TTATTGATCACTCTAGATTC+TGG + chr7_4:61980918-61980937 Msa1169040:three_prime_UTR 30.0%
! TGCAGATAAGATTCTTGTTT+AGG + chr7_4:61980941-61980960 Msa1169040:three_prime_UTR 30.0%
!! AATACACTCCTCTTTTGAAA+CGG - chr7_4:61981063-61981082 None:intergenic 30.0%
TCAGTTGTATTGAATAATGC+CGG + chr7_4:61981114-61981133 Msa1169040:three_prime_UTR 30.0%
! GATTTGGTAGGATAATATGA+CGG - chr7_4:61981167-61981186 None:intergenic 30.0%
CATATTATCCTACCAAATCT+TGG + chr7_4:61981168-61981187 Msa1169040:three_prime_UTR 30.0%
!! TATTGGTCTTATGATGGGAA+TGG + chr7_4:61980298-61980317 Msa1169040:intron 35.0%
!! ATTGGTCTTATGATGGGAAT+GGG + chr7_4:61980299-61980318 Msa1169040:intron 35.0%
AATTAAAAAGTGGGAGGGAT+GGG - chr7_4:61980397-61980416 None:intergenic 35.0%
TAATTAAAAAGTGGGAGGGA+TGG - chr7_4:61980398-61980417 None:intergenic 35.0%
! CTTGTTTAGGTTATGATGCT+TGG + chr7_4:61980954-61980973 Msa1169040:three_prime_UTR 35.0%
TTGAATAATGCCGGAATGAA+TGG + chr7_4:61981123-61981142 Msa1169040:three_prime_UTR 35.0%
! TCGAAAAACCAAGATTTGGT+AGG - chr7_4:61981179-61981198 None:intergenic 35.0%
!! ACCAAATCTTGGTTTTTCGA+AGG + chr7_4:61981179-61981198 Msa1169040:three_prime_UTR 35.0%
ACCTTCGAAAAACCAAGATT+TGG - chr7_4:61981183-61981202 None:intergenic 35.0%
!! TCTGTTTCTAGATGTAAACG+TGG + chr7_4:61981205-61981224 Msa1169040:three_prime_UTR 35.0%
!! CTGTTTCTAGATGTAAACGT+GGG + chr7_4:61981206-61981225 Msa1169040:three_prime_UTR 35.0%
!! TATTGGTCTTATGATGGGAA+TGG + chr7_4:61980298-61980317 Msa1169040:intron 35.0%
!! ATTGGTCTTATGATGGGAAT+GGG + chr7_4:61980299-61980318 Msa1169040:intron 35.0%
AATTAAAAAGTGGGAGGGAT+GGG - chr7_4:61980397-61980416 None:intergenic 35.0%
TAATTAAAAAGTGGGAGGGA+TGG - chr7_4:61980398-61980417 None:intergenic 35.0%
! CTTGTTTAGGTTATGATGCT+TGG + chr7_4:61980954-61980973 Msa1169040:three_prime_UTR 35.0%
TTGAATAATGCCGGAATGAA+TGG + chr7_4:61981123-61981142 Msa1169040:three_prime_UTR 35.0%
! TCGAAAAACCAAGATTTGGT+AGG - chr7_4:61981179-61981198 None:intergenic 35.0%
!! ACCAAATCTTGGTTTTTCGA+AGG + chr7_4:61981179-61981198 Msa1169040:three_prime_UTR 35.0%
ACCTTCGAAAAACCAAGATT+TGG - chr7_4:61981183-61981202 None:intergenic 35.0%
!! TCTGTTTCTAGATGTAAACG+TGG + chr7_4:61981205-61981224 Msa1169040:three_prime_UTR 35.0%
!! CTGTTTCTAGATGTAAACGT+GGG + chr7_4:61981206-61981225 Msa1169040:three_prime_UTR 35.0%
AATTCCACCTTGACTGTTGT+TGG - chr7_4:61980072-61980091 None:intergenic 40.0%
TTCACATGAAACTGGGCTAT+TGG + chr7_4:61980281-61980300 Msa1169040:intron 40.0%
!! TGGGCTATTGGTCTTATGAT+GGG + chr7_4:61980293-61980312 Msa1169040:intron 40.0%
TATGATATATACGAGGAGCG+AGG - chr7_4:61980336-61980355 None:intergenic 40.0%
GAAGGAAGACAGGTTTATCA+TGG - chr7_4:61980374-61980393 None:intergenic 40.0%
ATTAAAAAGTGGGAGGGATG+GGG - chr7_4:61980396-61980415 None:intergenic 40.0%
GTTGAAACAAGCCAAAGAAG+AGG + chr7_4:61980530-61980549 Msa1169040:CDS 40.0%
CACTAAACATCGAGCTCATT+TGG + chr7_4:61980566-61980585 Msa1169040:CDS 40.0%
CTTCAATGAATACAGAGCAG+TGG + chr7_4:61980701-61980720 Msa1169040:intron 40.0%
!! CCAAGAAGTCTAGTTCTTCA+CGG - chr7_4:61980849-61980868 None:intergenic 40.0%
ATGTATCGCCGTTTCAAAAG+AGG + chr7_4:61981052-61981071 Msa1169040:three_prime_UTR 40.0%
!! CAAGAGGTAGAAGCTTTGTT+TGG + chr7_4:61981229-61981248 Msa1169040:three_prime_UTR 40.0%
AATTCCACCTTGACTGTTGT+TGG - chr7_4:61980072-61980091 None:intergenic 40.0%
TTCACATGAAACTGGGCTAT+TGG + chr7_4:61980281-61980300 Msa1169040:intron 40.0%
!! TGGGCTATTGGTCTTATGAT+GGG + chr7_4:61980293-61980312 Msa1169040:intron 40.0%
TATGATATATACGAGGAGCG+AGG - chr7_4:61980336-61980355 None:intergenic 40.0%
GAAGGAAGACAGGTTTATCA+TGG - chr7_4:61980374-61980393 None:intergenic 40.0%
ATTAAAAAGTGGGAGGGATG+GGG - chr7_4:61980396-61980415 None:intergenic 40.0%
GTTGAAACAAGCCAAAGAAG+AGG + chr7_4:61980530-61980549 Msa1169040:CDS 40.0%
CACTAAACATCGAGCTCATT+TGG + chr7_4:61980566-61980585 Msa1169040:CDS 40.0%
CTTCAATGAATACAGAGCAG+TGG + chr7_4:61980701-61980720 Msa1169040:intron 40.0%
!! CCAAGAAGTCTAGTTCTTCA+CGG - chr7_4:61980849-61980868 None:intergenic 40.0%
ATGTATCGCCGTTTCAAAAG+AGG + chr7_4:61981052-61981071 Msa1169040:three_prime_UTR 40.0%
!! CAAGAGGTAGAAGCTTTGTT+TGG + chr7_4:61981229-61981248 Msa1169040:three_prime_UTR 40.0%
ATGGCATCCAACAACAGTCA+AGG + chr7_4:61980062-61980081 Msa1169040:CDS 45.0%
!! CTGGGCTATTGGTCTTATGA+TGG + chr7_4:61980292-61980311 Msa1169040:intron 45.0%
AGCCAAAGAAGAGGCTGAAA+AGG + chr7_4:61980539-61980558 Msa1169040:CDS 45.0%
! CTCCTTTTCAGCCTCTTCTT+TGG - chr7_4:61980544-61980563 None:intergenic 45.0%
ATACAGAGCAGTGGAGATTC+TGG + chr7_4:61980710-61980729 Msa1169040:intron 45.0%
GACCGAGGCTAGTAGAATTT+CGG + chr7_4:61980787-61980806 Msa1169040:CDS 45.0%
ACCGAGGCTAGTAGAATTTC+GGG + chr7_4:61980788-61980807 Msa1169040:CDS 45.0%
CCGTGAAGAACTAGACTTCT+TGG + chr7_4:61980846-61980865 Msa1169040:exon 45.0%
TAGATGTAAACGTGGGCAAG+AGG + chr7_4:61981213-61981232 Msa1169040:three_prime_UTR 45.0%
ATGGCATCCAACAACAGTCA+AGG + chr7_4:61980062-61980081 Msa1169040:CDS 45.0%
!! CTGGGCTATTGGTCTTATGA+TGG + chr7_4:61980292-61980311 Msa1169040:intron 45.0%
AGCCAAAGAAGAGGCTGAAA+AGG + chr7_4:61980539-61980558 Msa1169040:CDS 45.0%
! CTCCTTTTCAGCCTCTTCTT+TGG - chr7_4:61980544-61980563 None:intergenic 45.0%
ATACAGAGCAGTGGAGATTC+TGG + chr7_4:61980710-61980729 Msa1169040:intron 45.0%
GACCGAGGCTAGTAGAATTT+CGG + chr7_4:61980787-61980806 Msa1169040:CDS 45.0%
ACCGAGGCTAGTAGAATTTC+GGG + chr7_4:61980788-61980807 Msa1169040:CDS 45.0%
CCGTGAAGAACTAGACTTCT+TGG + chr7_4:61980846-61980865 Msa1169040:exon 45.0%
TAGATGTAAACGTGGGCAAG+AGG + chr7_4:61981213-61981232 Msa1169040:three_prime_UTR 45.0%
GCATCCAACAACAGTCAAGG+TGG + chr7_4:61980065-61980084 Msa1169040:CDS 50.0%
! CTGCTGAACAAGAAGCACAG+CGG + chr7_4:61980105-61980124 Msa1169040:CDS 50.0%
! CCCCGAAATTCTACTAGCCT+CGG - chr7_4:61980792-61980811 None:intergenic 50.0%
CCGAGGCTAGTAGAATTTCG+GGG + chr7_4:61980789-61980808 Msa1169040:CDS 50.0%
CGAGGCTAGTAGAATTTCGG+GGG + chr7_4:61980790-61980809 Msa1169040:CDS 50.0%
GCATCCAACAACAGTCAAGG+TGG + chr7_4:61980065-61980084 Msa1169040:CDS 50.0%
! CTGCTGAACAAGAAGCACAG+CGG + chr7_4:61980105-61980124 Msa1169040:CDS 50.0%
! CCCCGAAATTCTACTAGCCT+CGG - chr7_4:61980792-61980811 None:intergenic 50.0%
CCGAGGCTAGTAGAATTTCG+GGG + chr7_4:61980789-61980808 Msa1169040:CDS 50.0%
CGAGGCTAGTAGAATTTCGG+GGG + chr7_4:61980790-61980809 Msa1169040:CDS 50.0%
AAAAGTGGGAGGGATGGGGA+AGG - chr7_4:61980392-61980411 None:intergenic 55.0%
GATCCATCAGCTGAAGACCG+AGG + chr7_4:61980772-61980791 Msa1169040:CDS 55.0%
TAGCCTCGGTCTTCAGCTGA+TGG - chr7_4:61980778-61980797 None:intergenic 55.0%
AAAAGTGGGAGGGATGGGGA+AGG - chr7_4:61980392-61980411 None:intergenic 55.0%
GATCCATCAGCTGAAGACCG+AGG + chr7_4:61980772-61980791 Msa1169040:CDS 55.0%
TAGCCTCGGTCTTCAGCTGA+TGG - chr7_4:61980778-61980797 None:intergenic 55.0%
GAGGGATGGGGAAGGAAGAC+AGG - chr7_4:61980384-61980403 None:intergenic 60.0%
GAGGGATGGGGAAGGAAGAC+AGG - chr7_4:61980384-61980403 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 61979971 61981271 61979971 ID=Msa1169040;Name=Msa1169040
chr7_4 mRNA 61979971 61981271 61979971 ID=Msa1169040-mRNA-1;Parent=Msa1169040;Name=Msa1169040-mRNA-1;_AED=0.02;_eAED=0.02;_QI=91|1|1|1|1|1|3|412|110
chr7_4 exon 61979971 61980149 61979971 ID=Msa1169040-mRNA-1:exon:19533;Parent=Msa1169040-mRNA-1
chr7_4 exon 61980517 61980617 61980517 ID=Msa1169040-mRNA-1:exon:19534;Parent=Msa1169040-mRNA-1
chr7_4 exon 61980716 61981271 61980716 ID=Msa1169040-mRNA-1:exon:19535;Parent=Msa1169040-mRNA-1
chr7_4 five_prime_UTR 61979971 61980061 61979971 ID=Msa1169040-mRNA-1:five_prime_utr;Parent=Msa1169040-mRNA-1
chr7_4 CDS 61980062 61980149 61980062 ID=Msa1169040-mRNA-1:cds;Parent=Msa1169040-mRNA-1
chr7_4 CDS 61980517 61980617 61980517 ID=Msa1169040-mRNA-1:cds;Parent=Msa1169040-mRNA-1
chr7_4 CDS 61980716 61980859 61980716 ID=Msa1169040-mRNA-1:cds;Parent=Msa1169040-mRNA-1
chr7_4 three_prime_UTR 61980860 61981271 61980860 ID=Msa1169040-mRNA-1:three_prime_utr;Parent=Msa1169040-mRNA-1
Gene Sequence

>Msa1169040

ATGGCATCCAACAACAGTCAAGGTGGAATTCAACAATTATTGGCTGCTGAACAAGAAGCACAGCGGATTGTGAATGCTGCAAAAAATGAAAAATATGCTAGGTTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAGATCACTAAACATCGAGCTCATTTGGAAAATCATTTTCAAAACAAAGTATCAGCGAGCAGTGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAGACTGATACAAAGATCCATCAGCTGAAGACCGAGGCTAGTAGAATTTCGGGGGATGTTGTCAGCACACTTCTCAAGTATGTAACAACCGTGAAGAACTAG

Protein sequence

>Msa1169040

MASNNSQGGIQQLLAAEQEAQRIVNAAKNEKYARLKQAKEEAEKEITKHRAHLENHFQNKVSASSGDSGANVKRLEQETDTKIHQLKTEASRISGDVVSTLLKYVTTVKN*