AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1292830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292830 MtrunA17_Chr8g0368151 97.959 490 10 0 1 490 1 490 0.0 996
Msa1292830 MtrunA17_Chr1g0194521 38.242 455 267 6 29 483 99 539 1.28e-92 291
Msa1292830 MtrunA17_Chr1g0185601 32.955 440 283 6 55 489 69 501 1.71e-81 261
Msa1292830 MtrunA17_Chr2g0282091 31.788 453 305 3 24 475 29 478 1.88e-79 256
Msa1292830 MtrunA17_Chr8g0359961 29.630 432 300 4 25 455 35 463 3.10e-72 237
Msa1292830 MtrunA17_Chr2g0303221 33.012 415 268 8 23 433 31 439 4.40e-68 226
Msa1292830 MtrunA17_Chr4g0021331 31.724 435 285 7 6 433 8 437 1.08e-67 225
Msa1292830 MtrunA17_Chr3g0132571 28.000 450 316 5 43 488 57 502 1.08e-58 202
Msa1292830 MtrunA17_Chr2g0324251 30.000 420 280 7 28 438 37 451 2.52e-54 189
Msa1292830 MtrunA17_Chr1g0155351 32.827 329 218 3 43 368 74 402 1.16e-51 180
Msa1292830 MtrunA17_Chr7g0256181 27.311 476 322 11 15 484 150 607 1.29e-45 168
Msa1292830 MtrunA17_Chr1g0171501 28.062 449 301 10 35 477 151 583 5.66e-40 152
Msa1292830 MtrunA17_Chr8g0335951 29.699 266 180 3 219 484 190 448 2.70e-35 137
Msa1292830 MtrunA17_Chr8g0335951 22.703 370 263 5 1 364 57 409 1.84e-14 75.5
Msa1292830 MtrunA17_Chr2g0328121 23.366 505 359 9 7 490 12 509 7.99e-32 128
Msa1292830 MtrunA17_Chr8g0349421 30.290 241 161 3 244 484 3 236 4.04e-31 120
Msa1292830 MtrunA17_Chr6g0473381 25.243 309 224 3 122 430 22 323 1.28e-20 93.6
Msa1292830 MtrunA17_Chr5g0446031 22.278 395 298 3 72 464 429 816 7.62e-19 90.1
Msa1292830 MtrunA17_Chr5g0446031 20.238 420 285 5 85 464 92 501 5.61e-14 74.7
Msa1292830 MtrunA17_Chr5g0446031 23.028 317 234 4 145 460 225 532 6.98e-14 74.3
Msa1292830 MtrunA17_Chr5g0446031 21.538 325 245 4 77 399 574 890 1.56e-12 70.1
Msa1292830 MtrunA17_Chr8g0369641 23.481 362 263 5 71 427 436 788 1.84e-18 89.0
Msa1292830 MtrunA17_Chr8g0369641 23.464 358 256 8 126 477 318 663 1.81e-12 70.1
Msa1292830 MtrunA17_Chr7g0218641 21.970 396 278 3 58 453 158 522 2.20e-18 88.2
Msa1292830 MtrunA17_Chr8g0392911 27.273 264 186 4 122 382 194 454 8.48e-18 86.7
Msa1292830 MtrunA17_Chr8g0392911 24.928 345 214 7 126 434 338 673 7.14e-15 77.4
Msa1292830 MtrunA17_Chr1g0210801 23.209 349 224 6 97 443 249 555 2.59e-17 84.7
Msa1292830 MtrunA17_Chr1g0210801 18.640 397 313 4 63 459 80 466 4.17e-11 65.1
Msa1292830 MtrunA17_Chr6g0473031 24.206 252 190 1 126 377 214 464 4.95e-17 84.0
Msa1292830 MtrunA17_Chr6g0473031 22.526 293 224 2 74 364 265 556 7.56e-11 64.3
Msa1292830 MtrunA17_Chr6g0473261 25.292 257 181 3 126 377 248 498 1.07e-16 82.8
Msa1292830 MtrunA17_Chr4g0059671 23.775 408 288 8 62 459 109 503 1.54e-16 82.8
Msa1292830 MtrunA17_Chr6g0473341 22.619 252 194 1 126 377 200 450 1.68e-16 82.0
Msa1292830 MtrunA17_Chr6g0473481 25.292 257 181 3 126 377 200 450 2.58e-16 81.6
Msa1292830 MtrunA17_Chr6g0473511 25.292 257 181 3 126 377 200 450 2.58e-16 81.6
Msa1292830 MtrunA17_Chr6g0473241 22.619 252 194 1 126 377 200 450 3.27e-16 81.3
Msa1292830 MtrunA17_Chr6g0473351 25.681 257 177 4 126 377 200 447 3.52e-16 81.3
Msa1292830 MtrunA17_Chr1g0162281 23.352 364 259 7 126 480 122 474 4.17e-16 81.3
Msa1292830 MtrunA17_Chr1g0162281 19.540 348 253 3 126 473 407 727 2.14e-12 69.7
Msa1292830 MtrunA17_Chr3g0143851 21.114 341 262 2 139 479 297 630 6.85e-16 80.5
Msa1292830 MtrunA17_Chr1g0211881 25.625 320 223 6 117 433 206 513 6.85e-16 80.5
Msa1292830 MtrunA17_Chr7g0220501 23.423 333 243 6 71 396 264 591 1.40e-15 79.7
Msa1292830 MtrunA17_Chr5g0396041 23.214 280 208 2 159 438 337 609 1.60e-15 79.7
Msa1292830 MtrunA17_Chr5g0396041 24.583 240 180 1 126 365 374 612 9.04e-15 77.4
Msa1292830 MtrunA17_Chr8g0349431 34.188 117 75 1 36 150 6 122 2.05e-15 72.8
Msa1292830 MtrunA17_Chr6g0473431 24.206 252 187 2 126 377 203 450 2.54e-15 78.6
Msa1292830 MtrunA17_Chr5g0434021 22.251 382 281 6 97 474 300 669 2.71e-15 79.0
Msa1292830 MtrunA17_Chr7g0220481 21.829 339 247 6 60 396 234 556 3.10e-15 78.6
Msa1292830 MtrunA17_Chr6g0471531 21.942 278 216 1 122 399 218 494 3.92e-15 77.8
Msa1292830 MtrunA17_Chr6g0471871 21.988 332 252 2 122 453 207 531 5.76e-15 77.4
Msa1292830 MtrunA17_Chr6g0478691 23.462 260 194 3 126 383 281 537 6.25e-15 77.4
Msa1292830 MtrunA17_Chr3g0089851 23.016 252 192 2 126 376 206 456 7.74e-15 76.6
Msa1292830 MtrunA17_Chr8g0365781 23.150 419 260 10 74 464 404 788 8.38e-15 77.4
Msa1292830 MtrunA17_Chr8g0365781 21.695 295 218 5 143 434 649 933 9.39e-11 64.7
Msa1292830 MtrunA17_Chr1g0147171 22.741 343 247 8 122 458 143 473 9.66e-15 77.0
Msa1292830 MtrunA17_Chr7g0236501 22.222 252 194 2 126 376 224 474 1.08e-14 76.3
Msa1292830 MtrunA17_Chr6g0478551 22.029 345 223 6 122 464 196 496 1.13e-14 76.3
Msa1292830 MtrunA17_Chr5g0412071 22.888 367 270 7 109 471 314 671 1.32e-14 76.6
Msa1292830 MtrunA17_Chr6g0473501 21.429 252 197 1 126 377 95 345 1.66e-14 75.5
Msa1292830 MtrunA17_Chr6g0473471 21.429 252 197 1 126 377 95 345 1.76e-14 75.5
Msa1292830 MtrunA17_Chr7g0246931 24.069 349 220 7 122 433 174 514 1.94e-14 75.9
Msa1292830 MtrunA17_Chr8g0368891 22.984 248 190 1 122 369 415 661 1.99e-14 75.9
Msa1292830 MtrunA17_Chr2g0277851 19.182 318 250 2 141 458 192 502 2.07e-14 75.9
Msa1292830 MtrunA17_Chr6g0473251 24.125 257 181 4 126 377 200 447 2.27e-14 75.5
Msa1292830 MtrunA17_Chr4g0060341 21.751 354 231 7 126 440 203 549 3.39e-14 75.1
Msa1292830 MtrunA17_Chr4g0060341 22.925 253 159 2 122 374 342 558 4.78e-11 65.1
Msa1292830 MtrunA17_Chr3g0136851 21.616 458 333 8 39 480 208 655 5.39e-14 75.1
Msa1292830 MtrunA17_Chr6g0482551 20.923 325 227 3 62 386 166 460 6.30e-14 73.9
Msa1292830 MtrunA17_Chr4g0030691 20.937 363 243 5 105 465 127 447 7.33e-14 73.6
Msa1292830 MtrunA17_Chr6g0473311 25.385 260 189 3 120 377 11 267 7.83e-14 72.4
Msa1292830 MtrunA17_Chr3g0099661 21.538 455 322 9 43 490 424 850 9.13e-14 73.9
Msa1292830 MtrunA17_Chr3g0099661 20.974 267 209 2 124 389 277 542 8.76e-11 64.7
Msa1292830 MtrunA17_Chr4g0037841 21.751 354 231 7 126 440 203 549 1.11e-13 73.6
Msa1292830 MtrunA17_Chr4g0037841 23.715 253 157 4 122 374 342 558 3.09e-11 65.9
Msa1292830 MtrunA17_Chr4g0037841 20.681 382 250 6 133 472 140 510 4.70e-11 65.1
Msa1292830 MtrunA17_Chr6g0481971 22.709 251 158 3 126 376 304 518 1.28e-13 73.2
Msa1292830 MtrunA17_Chr8g0353181 21.258 461 298 11 56 480 82 513 1.32e-13 73.2
Msa1292830 MtrunA17_Chr6g0472611 24.219 256 193 1 122 377 202 456 1.35e-13 73.2
Msa1292830 MtrunA17_Chr6g0482571 24.201 219 165 1 159 377 96 313 1.57e-13 72.4
Msa1292830 MtrunA17_Chr6g0482571 24.380 242 180 3 122 362 164 403 5.00e-12 67.8
Msa1292830 MtrunA17_Chr6g0473441 21.825 252 196 1 126 377 200 450 2.70e-13 72.0
Msa1292830 MtrunA17_Chr6g0483431 21.378 421 249 10 37 397 11 409 3.63e-13 71.2
Msa1292830 MtrunA17_Chr6g0473491 21.429 252 197 1 126 377 200 450 3.77e-13 71.6
Msa1292830 MtrunA17_Chr2g0297211 20.698 401 301 6 71 465 230 619 3.89e-13 72.0
Msa1292830 MtrunA17_Chr4g0047591 22.350 349 255 4 120 464 459 795 5.74e-13 71.6
Msa1292830 MtrunA17_Chr1g0171281 24.206 252 190 1 126 377 201 451 6.58e-13 70.9
Msa1292830 MtrunA17_Chr7g0256621 22.289 332 236 6 142 465 169 486 1.04e-12 70.1
Msa1292830 MtrunA17_Chr6g0482601 21.739 253 193 3 126 376 118 367 1.13e-12 70.1
Msa1292830 MtrunA17_Chr4g0033981 20.102 393 268 6 79 433 206 590 1.36e-12 70.1
Msa1292830 MtrunA17_Chr1g0162221 23.232 198 149 2 97 292 373 569 1.42e-12 70.1
Msa1292830 MtrunA17_Chr6g0479541 20.708 367 283 3 30 394 205 565 1.61e-12 69.7
Msa1292830 MtrunA17_Chr1g0160881 23.224 366 260 9 122 480 241 592 1.64e-12 70.1
Msa1292830 MtrunA17_Chr1g0211781 23.457 324 202 6 159 480 462 741 1.81e-12 70.1
Msa1292830 MtrunA17_Chr6g0482611 21.654 254 194 3 126 377 211 461 1.89e-12 69.3
Msa1292830 MtrunA17_Chr6g0481991 20.992 262 206 1 122 383 232 492 2.22e-12 69.3
Msa1292830 MtrunA17_Chr7g0241721 22.008 259 199 3 126 383 25 281 2.34e-12 69.3
Msa1292830 MtrunA17_Chr6g0482971 21.429 266 198 5 126 386 197 456 2.84e-12 68.9
Msa1292830 MtrunA17_Chr1g0181661 29.630 162 110 2 107 267 417 575 2.88e-12 69.3
Msa1292830 MtrunA17_Chr5g0419551 19.929 281 223 2 120 399 351 630 2.96e-12 68.9
Msa1292830 MtrunA17_Chr3g0126831 21.389 360 250 6 140 490 422 757 3.64e-12 68.9
Msa1292830 MtrunA17_Chr5g0442231 21.212 330 247 5 95 420 377 697 4.07e-12 68.6
Msa1292830 MtrunA17_Chr5g0442231 18.592 355 277 4 127 480 309 652 2.77e-11 65.9
Msa1292830 MtrunA17_Chr1g0194281 24.752 202 149 3 124 324 232 431 5.32e-12 68.2
Msa1292830 MtrunA17_Chr3g0102961 20.743 323 225 5 58 377 168 462 5.49e-12 67.8
Msa1292830 MtrunA17_Chr5g0434451 22.642 265 201 2 126 387 299 562 5.97e-12 68.2
Msa1292830 MtrunA17_Chr7g0241871 21.164 378 250 7 43 377 117 489 6.12e-12 68.2
Msa1292830 MtrunA17_Chr4g0039041 20.956 272 214 1 126 397 467 737 6.50e-12 68.2
Msa1292830 MtrunA17_Chr8g0375231 23.482 247 188 1 126 372 257 502 6.59e-12 68.2
Msa1292830 MtrunA17_Chr6g0473331 21.053 323 224 5 58 377 194 488 8.14e-12 67.4
Msa1292830 MtrunA17_Chr6g0482561 21.967 305 200 5 74 376 96 364 8.31e-12 67.0
Msa1292830 MtrunA17_Chr7g0217921 22.569 288 209 4 126 407 403 682 9.40e-12 67.4
Msa1292830 MtrunA17_Chr8g0387281 22.491 289 183 4 122 372 314 599 1.05e-11 67.4
Msa1292830 MtrunA17_Chr1g0182521 20.253 395 306 3 74 466 221 608 1.17e-11 67.4
Msa1292830 MtrunA17_Chr7g0214351 22.368 380 278 8 62 436 283 650 1.24e-11 67.0
Msa1292830 MtrunA17_Chr6g0482541 22.441 254 192 3 126 377 45 295 1.89e-11 65.9
Msa1292830 MtrunA17_Chr3g0121341 22.118 321 240 5 161 478 163 476 1.89e-11 66.6
Msa1292830 MtrunA17_Chr6g0471481 21.942 278 205 2 122 399 22 287 1.91e-11 65.1
Msa1292830 MtrunA17_Chr6g0478291 22.097 267 203 4 122 386 203 466 2.01e-11 66.2
Msa1292830 MtrunA17_Chr1g0168811 20.648 247 195 1 126 372 290 535 2.11e-11 66.2
Msa1292830 MtrunA17_Chr6g0481621 19.585 337 268 2 43 377 73 408 2.47e-11 65.9
Msa1292830 MtrunA17_Chr6g0481621 19.608 255 204 1 122 376 224 477 7.77e-11 64.3
Msa1292830 MtrunA17_Chr2g0297991 22.182 275 201 4 126 394 556 823 2.95e-11 66.2
Msa1292830 MtrunA17_Chr2g0297991 21.731 543 328 15 11 483 321 836 4.97e-11 65.5
Msa1292830 MtrunA17_Chr6g0476151 21.887 265 206 1 122 386 199 462 3.15e-11 65.5
Msa1292830 MtrunA17_Chr1g0196741 24.380 242 179 4 125 365 461 699 3.27e-11 65.9
Msa1292830 MtrunA17_Chr7g0215561 22.105 380 279 8 62 436 282 649 3.97e-11 65.5
Msa1292830 MtrunA17_Chr2g0292711 21.978 273 201 3 126 394 226 490 4.87e-11 65.1
Msa1292830 MtrunA17_Chr8g0377751 20.702 285 206 6 86 365 253 522 5.91e-11 65.1
Msa1292830 MtrunA17_Chr7g0245891 29.518 166 113 3 97 260 188 351 6.82e-11 64.3
Msa1292830 MtrunA17_Chr3g0143411 21.914 324 242 7 57 376 148 464 6.88e-11 64.7
Msa1292830 MtrunA17_Chr2g0296811 22.798 193 146 2 81 271 1 192 7.57e-11 62.0
Msa1292830 MtrunA17_Chr6g0481431 25.194 258 151 6 122 376 9 227 7.57e-11 62.4
Msa1292830 MtrunA17_Chr4g0069231 25.000 204 152 1 160 362 141 344 8.36e-11 63.9
Msa1292830 MtrunA17_Chr1g0170071 19.543 394 260 9 85 465 359 708 8.44e-11 64.7
Msa1292830 MtrunA17_Chr0c20g0493831 25.000 204 152 1 160 362 141 344 8.91e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1292830 AT1G60770.1 65.779 488 166 1 4 490 3 490 0.0 699
Msa1292830 AT1G02370.1 41.447 456 262 3 33 487 84 535 4.03e-120 363
Msa1292830 AT4G01990.1 39.040 479 281 5 12 487 30 500 9.56e-107 327
Msa1292830 AT1G02150.1 35.147 441 280 3 2 439 46 483 5.34e-86 274
Msa1292830 AT4G02820.1 34.240 441 282 5 50 489 88 521 1.60e-83 268
Msa1292830 AT4G21705.1 32.334 467 312 4 24 488 26 490 1.37e-81 262
Msa1292830 AT5G27460.1 29.867 452 309 4 28 474 43 491 1.39e-63 214
Msa1292830 AT2G20710.1 30.000 440 296 7 23 459 38 468 2.13e-61 209
Msa1292830 AT2G20710.2 32.075 371 241 6 91 459 12 373 2.76e-58 198
Msa1292830 AT5G09450.1 30.719 306 208 4 43 344 75 380 1.16e-44 162
Msa1292830 AT1G80270.1 28.125 448 299 10 37 477 142 573 3.89e-43 161
Msa1292830 AT1G80270.3 28.125 448 299 10 37 477 142 573 3.89e-43 161
Msa1292830 AT1G80270.2 28.125 448 299 10 37 477 142 573 3.89e-43 161
Msa1292830 AT1G80270.5 28.125 448 299 10 37 477 142 573 3.89e-43 161
Msa1292830 AT1G80270.4 28.125 448 299 10 37 477 142 573 3.89e-43 161
Msa1292830 AT1G28020.1 28.440 436 288 9 40 461 60 485 1.79e-42 158
Msa1292830 AT1G15480.1 26.577 444 315 6 35 477 138 571 2.38e-40 153
Msa1292830 AT3G15590.1 27.074 458 313 9 31 478 141 587 2.20e-33 134
Msa1292830 AT3G15590.2 27.074 458 313 9 31 478 141 587 2.20e-33 134
Msa1292830 AT1G07590.1 23.758 463 333 6 37 489 79 531 1.06e-26 113
Msa1292830 AT3G11380.1 29.766 299 174 6 62 356 82 348 8.14e-26 111
Msa1292830 AT3G11380.1 30.288 208 137 4 11 215 339 541 3.92e-17 84.7
Msa1292830 AT2G35130.3 24.462 372 231 8 74 440 245 571 2.45e-20 94.7
Msa1292830 AT2G35130.1 24.462 372 231 8 74 440 248 574 2.47e-20 94.7
Msa1292830 AT2G35130.2 24.462 372 231 8 74 440 270 596 3.10e-20 94.4
Msa1292830 AT3G06920.2 21.883 393 298 3 74 464 410 795 8.17e-18 87.4
Msa1292830 AT3G06920.2 22.626 358 269 3 126 483 185 534 3.36e-17 85.5
Msa1292830 AT3G06920.2 22.263 274 205 2 126 399 604 869 1.41e-12 70.9
Msa1292830 AT3G06920.3 21.883 393 298 3 74 464 410 795 8.17e-18 87.4
Msa1292830 AT3G06920.3 22.626 358 269 3 126 483 185 534 3.36e-17 85.5
Msa1292830 AT3G06920.3 22.263 274 205 2 126 399 604 869 1.41e-12 70.9
Msa1292830 AT3G06920.1 21.883 393 298 3 74 464 396 781 8.93e-18 87.0
Msa1292830 AT3G06920.1 22.626 358 269 3 126 483 171 520 3.74e-17 85.1
Msa1292830 AT3G06920.1 22.263 274 205 2 126 399 590 855 1.66e-12 70.5
Msa1292830 AT5G39980.1 26.848 257 187 1 120 376 187 442 3.12e-17 85.1
Msa1292830 AT5G39980.1 21.538 325 244 4 157 478 154 470 5.97e-14 74.7
Msa1292830 AT5G39980.1 19.466 262 191 5 121 376 398 645 7.02e-11 65.1
Msa1292830 AT1G03560.1 21.038 366 231 4 125 490 154 461 3.42e-17 85.1
Msa1292830 AT1G09680.1 23.552 259 197 1 126 384 313 570 8.67e-17 83.6
Msa1292830 AT1G09680.1 20.890 292 224 2 126 417 243 527 6.45e-12 68.6
Msa1292830 AT5G65560.1 22.404 366 241 5 122 487 392 714 5.16e-16 81.6
Msa1292830 AT5G65560.2 22.404 366 241 5 122 487 392 714 5.16e-16 81.6
Msa1292830 AT5G65560.3 22.404 366 241 5 122 487 392 714 5.16e-16 81.6
Msa1292830 AT2G02150.1 23.108 251 192 1 126 376 265 514 1.46e-15 80.1
Msa1292830 AT2G02150.2 23.108 251 192 1 126 376 265 514 1.46e-15 80.1
Msa1292830 AT5G12100.1 29.710 276 179 7 126 394 217 484 1.58e-15 80.1
Msa1292830 AT5G12100.1 21.176 255 200 1 122 376 388 641 5.88e-11 65.5
Msa1292830 AT2G18940.1 23.420 269 205 1 126 394 529 796 2.44e-15 79.3
Msa1292830 AT2G18940.1 22.404 183 139 2 102 282 608 789 6.26e-11 65.5
Msa1292830 AT5G02860.1 24.597 248 172 4 159 399 455 694 5.09e-15 78.6
Msa1292830 AT5G02860.1 21.616 458 303 9 32 479 112 523 6.08e-14 75.1
Msa1292830 AT5G02860.1 21.790 257 200 1 120 376 276 531 1.48e-13 73.9
Msa1292830 AT5G02860.1 23.413 252 192 1 126 377 527 777 5.86e-13 72.0
Msa1292830 AT5G02860.1 25.980 204 148 2 109 310 613 815 8.09e-13 71.6
Msa1292830 AT5G02860.4 24.597 248 172 4 159 399 455 694 5.09e-15 78.6
Msa1292830 AT5G02860.4 21.616 458 303 9 32 479 112 523 6.08e-14 75.1
Msa1292830 AT5G02860.4 21.790 257 200 1 120 376 276 531 1.48e-13 73.9
Msa1292830 AT5G02860.4 23.413 252 192 1 126 377 527 777 5.86e-13 72.0
Msa1292830 AT5G02860.4 25.980 204 148 2 109 310 613 815 8.09e-13 71.6
Msa1292830 AT5G02860.2 24.597 248 172 4 159 399 455 694 5.09e-15 78.6
Msa1292830 AT5G02860.2 21.616 458 303 9 32 479 112 523 6.08e-14 75.1
Msa1292830 AT5G02860.2 21.790 257 200 1 120 376 276 531 1.48e-13 73.9
Msa1292830 AT5G02860.2 23.413 252 192 1 126 377 527 777 5.86e-13 72.0
Msa1292830 AT5G02860.2 25.980 204 148 2 109 310 613 815 8.09e-13 71.6
Msa1292830 AT5G02860.5 24.597 248 172 4 159 399 455 694 5.09e-15 78.6
Msa1292830 AT5G02860.5 21.616 458 303 9 32 479 112 523 6.08e-14 75.1
Msa1292830 AT5G02860.5 21.790 257 200 1 120 376 276 531 1.48e-13 73.9
Msa1292830 AT5G02860.5 23.413 252 192 1 126 377 527 777 5.86e-13 72.0
Msa1292830 AT5G02860.5 25.980 204 148 2 109 310 613 815 8.09e-13 71.6
Msa1292830 AT5G02860.3 24.597 248 172 4 159 399 455 694 5.09e-15 78.6
Msa1292830 AT5G02860.3 21.616 458 303 9 32 479 112 523 6.08e-14 75.1
Msa1292830 AT5G02860.3 21.790 257 200 1 120 376 276 531 1.48e-13 73.9
Msa1292830 AT5G02860.3 23.413 252 192 1 126 377 527 777 5.86e-13 72.0
Msa1292830 AT5G02860.3 25.980 204 148 2 109 310 613 815 8.09e-13 71.6
Msa1292830 AT2G31400.1 23.759 282 212 2 111 390 325 605 1.35e-14 77.0
Msa1292830 AT2G31400.1 26.761 213 153 2 70 280 354 565 3.26e-13 72.8
Msa1292830 AT2G31400.2 23.759 282 212 2 111 390 325 605 1.46e-14 77.0
Msa1292830 AT2G31400.2 25.100 251 184 3 33 280 316 565 2.63e-13 73.2
Msa1292830 AT1G62590.2 24.269 342 214 6 77 416 318 616 1.59e-14 76.6
Msa1292830 AT1G62590.1 24.269 342 214 6 77 416 318 616 1.59e-14 76.6
Msa1292830 AT5G61990.1 23.810 294 214 5 102 388 534 824 2.08e-14 76.6
Msa1292830 AT5G61990.1 21.591 264 206 1 122 385 451 713 1.13e-12 71.2
Msa1292830 AT1G28000.1 25.442 283 201 7 21 297 31 309 3.63e-14 74.7
Msa1292830 AT3G53170.4 21.379 290 226 2 111 399 153 441 3.86e-14 74.7
Msa1292830 AT1G64583.2 19.382 356 280 2 126 481 84 432 4.17e-14 75.1
Msa1292830 AT3G59040.1 26.552 290 196 7 117 399 205 484 4.63e-14 75.1
Msa1292830 AT3G59040.1 25.943 212 156 1 145 356 301 511 2.14e-13 73.2
Msa1292830 AT1G63230.1 24.922 321 195 7 121 439 39 315 5.24e-14 73.6
Msa1292830 AT1G64583.1 19.382 356 280 2 126 481 109 457 5.36e-14 74.7
Msa1292830 AT3G59040.2 26.552 290 196 7 117 399 212 491 6.05e-14 74.7
Msa1292830 AT3G59040.2 25.943 212 156 1 145 356 308 518 1.98e-13 73.2
Msa1292830 AT3G53700.1 21.229 358 268 6 128 480 264 612 6.07e-14 75.1
Msa1292830 AT1G77360.2 21.933 269 201 2 184 452 158 417 6.11e-14 74.3
Msa1292830 AT1G77360.2 25.000 372 249 13 52 414 99 449 2.88e-12 69.3
Msa1292830 AT1G62930.1 22.338 385 252 5 38 417 270 612 6.67e-14 74.7
Msa1292830 AT1G66345.1 21.769 441 294 9 84 490 107 530 7.81e-14 74.3
Msa1292830 AT5G04810.2 19.492 354 278 2 126 479 347 693 8.74e-14 74.3
Msa1292830 AT3G53170.2 21.377 276 215 2 111 385 203 477 9.56e-14 73.9
Msa1292830 AT3G53170.1 21.377 276 215 2 111 385 203 477 9.56e-14 73.9
Msa1292830 AT1G77360.1 21.933 269 201 2 184 452 194 453 9.63e-14 73.9
Msa1292830 AT1G77360.1 25.000 372 249 13 52 414 135 485 3.89e-12 68.9
Msa1292830 AT2G32630.1 23.442 337 249 5 145 480 211 539 1.00e-13 73.9
Msa1292830 AT5G04810.1 19.492 354 278 2 126 479 347 693 1.11e-13 74.3
Msa1292830 AT3G22470.1 21.127 355 269 4 128 480 180 525 3.62e-13 72.4
Msa1292830 AT3G23020.1 23.932 234 173 3 159 389 506 737 3.67e-13 72.4
Msa1292830 AT3G23020.1 21.995 441 326 8 27 459 229 659 5.44e-13 72.0
Msa1292830 AT3G06430.1 24.020 204 154 1 160 362 126 329 4.64e-13 71.6
Msa1292830 AT3G16010.1 25.352 284 204 3 114 390 288 570 6.25e-13 71.6
Msa1292830 AT3G16010.1 21.918 219 169 2 159 376 374 591 2.91e-11 66.2
Msa1292830 AT2G17140.1 20.803 274 212 2 108 376 165 438 6.47e-13 71.6
Msa1292830 AT2G17140.2 20.803 274 212 2 108 376 165 438 6.47e-13 71.6
Msa1292830 AT1G64100.2 20.570 316 236 5 126 439 229 531 6.57e-13 71.6
Msa1292830 AT1G63330.3 23.099 342 218 5 77 416 243 541 7.59e-13 71.2
Msa1292830 AT1G63330.1 23.099 342 218 5 77 416 243 541 7.59e-13 71.2
Msa1292830 AT1G63330.2 23.099 342 218 5 77 416 243 541 7.59e-13 71.2
Msa1292830 AT1G64100.1 20.570 316 236 5 126 439 229 531 8.41e-13 71.2
Msa1292830 AT1G64100.3 20.570 316 236 5 126 439 229 531 8.41e-13 71.2
Msa1292830 AT1G09900.1 21.471 340 255 4 128 466 142 470 1.27e-12 70.5
Msa1292830 AT1G12775.1 21.678 286 211 3 120 399 330 608 1.37e-12 70.5
Msa1292830 AT1G12775.1 23.026 304 231 2 76 377 319 621 3.70e-11 65.9
Msa1292830 AT1G09820.1 21.348 356 230 5 122 472 222 532 1.66e-12 70.1
Msa1292830 AT1G12620.1 22.761 268 188 5 126 384 320 577 1.73e-12 70.1
Msa1292830 AT1G12620.1 23.684 304 229 2 76 377 303 605 4.86e-11 65.5
Msa1292830 AT1G12620.1 21.324 272 209 3 128 397 182 450 9.28e-11 64.7
Msa1292830 AT1G62670.2 22.441 254 196 1 124 377 257 509 1.77e-12 70.1
Msa1292830 AT1G62670.2 23.333 300 227 2 74 371 310 608 1.49e-11 67.4
Msa1292830 AT1G62670.2 22.180 266 202 3 126 389 224 486 9.53e-11 64.7
Msa1292830 AT1G62670.1 22.441 254 196 1 124 377 257 509 1.77e-12 70.1
Msa1292830 AT1G62670.1 23.333 300 227 2 74 371 310 608 1.49e-11 67.4
Msa1292830 AT1G62670.1 22.180 266 202 3 126 389 224 486 9.53e-11 64.7
Msa1292830 AT4G20090.2 22.780 259 196 2 122 377 326 583 2.23e-12 70.1
Msa1292830 AT4G20090.1 22.780 259 196 2 122 377 326 583 2.23e-12 70.1
Msa1292830 AT4G30825.1 30.387 181 116 3 97 272 706 881 2.45e-12 70.1
Msa1292830 AT1G12300.1 24.342 304 227 2 76 377 319 621 2.53e-12 69.7
Msa1292830 AT1G12300.1 20.649 339 258 4 128 464 198 527 1.78e-11 67.0
Msa1292830 AT1G74750.2 22.628 274 203 4 192 464 358 623 3.05e-12 69.7
Msa1292830 AT1G74750.1 22.628 274 203 4 192 464 358 623 3.05e-12 69.7
Msa1292830 AT1G74750.4 22.628 274 203 4 192 464 358 623 3.05e-12 69.7
Msa1292830 AT1G74750.3 22.628 274 203 4 192 464 358 623 3.05e-12 69.7
Msa1292830 AT3G09650.1 24.510 204 149 3 89 291 457 656 3.63e-12 69.3
Msa1292830 AT2G41720.2 21.914 324 242 5 159 480 189 503 4.06e-12 68.9
Msa1292830 AT1G74850.1 24.903 257 156 4 122 377 140 360 4.62e-12 68.9
Msa1292830 AT1G74850.1 20.879 364 245 6 124 487 248 568 9.45e-11 65.1
Msa1292830 AT1G43010.1 28.302 212 135 5 43 248 56 256 4.69e-12 66.6
Msa1292830 AT4G11690.1 23.485 264 187 3 120 376 195 450 4.78e-12 68.6
Msa1292830 AT4G11690.1 24.852 169 126 1 122 290 302 469 6.97e-12 68.2
Msa1292830 AT5G42310.1 21.479 284 216 2 139 422 320 596 4.86e-12 68.9
Msa1292830 AT5G42310.1 22.050 322 230 7 162 476 273 580 4.19e-11 65.9
Msa1292830 AT5G42310.1 22.876 306 223 3 163 465 309 604 5.74e-11 65.5
Msa1292830 AT5G27270.4 21.888 233 180 2 122 354 292 522 4.94e-12 68.9
Msa1292830 AT5G27270.1 21.888 233 180 2 122 354 292 522 5.04e-12 68.9
Msa1292830 AT1G05670.1 19.712 416 317 8 36 441 150 558 5.20e-12 68.9
Msa1292830 AT1G05670.1 19.582 383 297 5 76 455 302 676 5.87e-11 65.5
Msa1292830 AT1G05670.2 19.712 416 317 8 36 441 150 558 5.20e-12 68.9
Msa1292830 AT1G05670.2 19.582 383 297 5 76 455 302 676 5.87e-11 65.5
Msa1292830 AT1G05670.3 19.712 416 317 8 36 441 150 558 5.20e-12 68.9
Msa1292830 AT1G05670.3 19.582 383 297 5 76 455 302 676 5.87e-11 65.5
Msa1292830 AT5G27270.5 21.888 233 180 2 122 354 292 522 5.23e-12 68.9
Msa1292830 AT2G41720.1 21.914 324 242 5 159 480 321 635 5.29e-12 68.9
Msa1292830 AT2G41720.3 21.914 324 242 5 159 480 321 635 5.36e-12 68.9
Msa1292830 AT4G28010.1 22.543 346 224 5 122 466 106 408 5.71e-12 68.6
Msa1292830 AT3G53170.3 21.190 269 203 2 126 385 182 450 6.08e-12 68.2
Msa1292830 AT5G01110.1 21.114 341 254 6 126 462 273 602 6.41e-12 68.6
Msa1292830 AT5G01110.1 20.992 262 206 1 129 390 241 501 1.35e-11 67.4
Msa1292830 AT1G63070.1 22.530 253 194 2 126 377 218 469 6.60e-12 68.2
Msa1292830 AT4G11690.2 24.852 169 126 1 122 290 275 442 6.68e-12 68.2
Msa1292830 AT4G11690.2 23.643 258 182 3 126 376 174 423 1.02e-11 67.8
Msa1292830 AT5G14770.2 24.346 382 236 12 65 400 306 680 7.07e-12 68.6
Msa1292830 AT5G14770.5 24.346 382 236 12 65 400 306 680 7.07e-12 68.6
Msa1292830 AT5G14770.4 24.346 382 236 12 65 400 306 680 7.07e-12 68.6
Msa1292830 AT5G14770.1 24.346 382 236 12 65 400 306 680 7.07e-12 68.6
Msa1292830 AT5G14770.3 24.346 382 236 12 65 400 306 680 7.07e-12 68.6
Msa1292830 AT5G27270.3 21.983 232 179 2 122 353 87 316 7.47e-12 68.6
Msa1292830 AT5G27270.2 21.983 232 179 2 122 353 87 316 7.47e-12 68.6
Msa1292830 AT1G63130.1 20.573 384 258 5 38 416 271 612 8.54e-12 68.2
Msa1292830 AT1G63130.2 20.573 384 258 5 38 416 271 612 8.54e-12 68.2
Msa1292830 AT5G01110.2 21.114 341 254 6 126 462 301 630 8.65e-12 68.2
Msa1292830 AT5G01110.2 20.992 262 206 1 129 390 269 529 1.65e-11 67.4
Msa1292830 AT3G04130.1 27.119 236 168 4 126 358 262 496 9.71e-12 67.8
Msa1292830 AT3G04130.2 27.119 236 168 4 126 358 262 496 9.71e-12 67.8
Msa1292830 AT1G52640.1 23.502 217 159 4 101 313 219 432 1.51e-11 67.0
Msa1292830 AT1G63080.2 21.725 313 207 3 74 384 294 570 1.93e-11 67.0
Msa1292830 AT1G63080.1 21.725 313 207 3 74 384 294 570 1.93e-11 67.0
Msa1292830 AT1G63080.3 21.725 313 207 3 74 384 294 570 1.93e-11 67.0
Msa1292830 AT1G10910.2 20.332 241 191 1 141 381 220 459 2.03e-11 66.6
Msa1292830 AT1G10910.1 20.332 241 191 1 141 381 220 459 2.08e-11 67.0
Msa1292830 AT5G25630.3 22.028 286 209 4 126 402 67 347 2.26e-11 66.6
Msa1292830 AT2G15630.1 19.652 402 249 6 118 452 220 614 2.27e-11 66.6
Msa1292830 AT5G25630.1 22.028 286 209 4 126 402 118 398 2.28e-11 66.6
Msa1292830 AT2G19280.4 25.100 251 181 4 124 371 409 655 2.47e-11 66.6
Msa1292830 AT2G19280.2 25.100 251 181 4 124 371 409 655 2.47e-11 66.6
Msa1292830 AT2G19280.1 25.100 251 181 4 124 371 409 655 2.47e-11 66.6
Msa1292830 AT2G19280.3 25.100 251 181 4 124 371 409 655 2.47e-11 66.6
Msa1292830 AT1G19290.2 20.866 254 200 1 120 373 293 545 2.75e-11 66.6
Msa1292830 AT1G19290.1 20.866 254 200 1 120 373 293 545 2.75e-11 66.6
Msa1292830 AT4G31850.1 21.149 383 266 5 122 472 187 565 2.83e-11 66.6
Msa1292830 AT3G22470.2 21.849 357 248 7 59 394 214 560 3.02e-11 66.2
Msa1292830 AT1G51965.1 21.981 323 246 3 74 394 292 610 3.30e-11 66.2
Msa1292830 AT4G39620.1 23.137 255 187 6 122 372 207 456 3.70e-11 65.9
Msa1292830 AT4G39620.2 23.320 253 185 6 122 370 207 454 3.81e-11 65.9
Msa1292830 AT1G06710.7 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.7 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.1 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.1 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.9 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.9 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.4 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.4 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.13 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.13 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.3 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.3 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.8 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.8 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.2 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.2 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.19 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.19 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.5 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.5 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.6 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.6 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G06710.12 21.534 339 247 3 74 394 502 839 4.00e-11 66.2
Msa1292830 AT1G06710.12 20.833 360 256 6 130 472 424 771 4.14e-11 66.2
Msa1292830 AT1G13040.2 22.222 270 200 3 135 399 21 285 4.25e-11 65.5
Msa1292830 AT1G13040.1 22.222 270 200 3 135 399 21 285 4.25e-11 65.5
Msa1292830 AT3G48810.1 21.725 313 228 6 122 431 180 478 4.43e-11 65.9
Msa1292830 AT1G06710.15 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.15 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G06710.18 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.18 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G06710.17 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.17 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G06710.14 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.14 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G06710.16 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.16 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G06710.10 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.10 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G06710.11 20.833 360 256 6 130 472 424 771 4.74e-11 65.9
Msa1292830 AT1G06710.11 21.534 339 247 3 74 394 502 839 5.69e-11 65.9
Msa1292830 AT1G02420.1 23.353 167 127 1 124 290 247 412 5.22e-11 65.1
Msa1292830 AT5G28370.1 27.922 154 109 2 126 278 514 666 5.28e-11 65.5
Msa1292830 AT3G61520.1 27.922 154 109 2 126 278 514 666 5.81e-11 65.5
Msa1292830 AT1G06580.1 20.096 418 321 4 49 464 42 448 5.96e-11 65.1
Msa1292830 AT5G28460.1 27.922 154 109 2 126 278 514 666 6.39e-11 65.5
Msa1292830 AT5G39710.1 21.237 372 280 6 104 471 184 546 7.99e-11 65.1
Msa1292830 AT3G22670.1 24.294 177 132 2 97 272 246 421 8.73e-11 64.7
Msa1292830 AT5G16420.1 22.823 333 240 7 129 457 197 516 9.74e-11 64.3
Msa1292830 AT5G16420.3 22.823 333 240 7 129 457 197 516 9.74e-11 64.3
Msa1292830 AT5G16420.4 22.823 333 240 7 129 457 197 516 9.74e-11 64.3
Msa1292830 AT5G16420.2 22.823 333 240 7 129 457 197 516 9.74e-11 64.3

Find 110 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCAGTTAATGATATTTC+TGG 0.193804 8_3:+49437082 Msa1292830:CDS
TTGATTCTTTCCAGAAAATT+AGG 0.203761 8_3:+49434839 Msa1292830:five_prime_UTR
TTTGAATATGATTCAGGTTT+TGG 0.220843 8_3:+49437378 Msa1292830:CDS
ATTACATTGTATGGGAAAAT+AGG 0.247775 8_3:+49437283 Msa1292830:CDS
CAGTTTCTAATTACATTGTA+TGG 0.264475 8_3:+49437274 Msa1292830:CDS
AAGCTATTTGAATATGATTC+AGG 0.264761 8_3:+49437372 Msa1292830:CDS
TGTCTACACCAACCATTATA+TGG 0.278489 8_3:+49438101 Msa1292830:three_prime_UTR
ATATAGCCTCAAGCAACTTC+TGG 0.280772 8_3:-49437912 None:intergenic
GTGGGAAGCGCGTTTATAAA+TGG 0.289722 8_3:+49435090 Msa1292830:CDS
GCAAAGTATATGAGGTCTAT+AGG 0.314428 8_3:+49437305 Msa1292830:CDS
CCAAGCTATACATATTGATT+TGG 0.317319 8_3:+49436748 Msa1292830:CDS
GAAGTGGCGCATGCCGTATA+TGG 0.327899 8_3:+49438026 Msa1292830:three_prime_UTR
CTTATATTGAAAACCATATA+CGG 0.357585 8_3:-49438039 None:intergenic
AGGAGCGTGCTCGGAGGAGG+GGG 0.367351 8_3:+49437542 Msa1292830:CDS
ATAGGGTCTGGCGGTCTCTT+AGG 0.369780 8_3:+49437323 Msa1292830:CDS
ATTATATCAACCTGCTCTTA+AGG 0.369801 8_3:+49435151 Msa1292830:CDS
CTTAATCAGTTTATTAAGAG+TGG 0.375038 8_3:+49435071 Msa1292830:CDS
CGGAAACATTTCTCTGCTCC+TGG 0.390524 8_3:-49437418 None:intergenic
AGCCTTCATTTCTTGAATGA+TGG 0.403255 8_3:-49437008 None:intergenic
TTCTCAGTGATGAGCGTAAC+CGG 0.418362 8_3:-49434907 None:intergenic
AGAAGGTGCACTTAAGGAAT+TGG 0.419645 8_3:+49437216 Msa1292830:CDS
GGTCTTTATCATATTCCTCT+TGG 0.433190 8_3:-49436717 None:intergenic
AAGAGGGACGGTCGAGTCAC+TGG 0.436839 8_3:+49437130 Msa1292830:CDS
TAAAGTCTGCATTCCGCAAA+TGG 0.437007 8_3:-49437606 None:intergenic
ATGACTCTTTATACTAAAGT+AGG 0.440667 8_3:+49436965 Msa1292830:CDS
ACATTATATGTGTAAGAATC+CGG 0.442518 8_3:-49437043 None:intergenic
TAAAGGAGCGTGCTCGGAGG+AGG 0.446366 8_3:+49437539 Msa1292830:CDS
TATACTGAGAAACCATATAA+TGG 0.452156 8_3:-49438113 None:intergenic
ATTCTTACACATATAATGTA+TGG 0.452805 8_3:+49437047 Msa1292830:CDS
CGCGTTTATAAATGGGAAGT+TGG 0.453242 8_3:+49435098 Msa1292830:CDS
CAAAGTATATGAGGTCTATA+GGG 0.454086 8_3:+49437306 Msa1292830:CDS
TGATATTTCTGGTGTTGAAA+GGG 0.469920 8_3:+49437093 Msa1292830:CDS
TATAGCCTCAAGCAACTTCT+GGG 0.470403 8_3:-49437911 None:intergenic
ATGATATTTCTGGTGTTGAA+AGG 0.474746 8_3:+49437092 Msa1292830:CDS
AAAGGAGCGTGCTCGGAGGA+GGG 0.478966 8_3:+49437540 Msa1292830:CDS
AGAAATCTGTGGAATCTGTT+GGG 0.480158 8_3:+49437782 Msa1292830:CDS
AAGAAATCTGTGGAATCTGT+TGG 0.481388 8_3:+49437781 Msa1292830:CDS
ATACCTATTGTCTCAGATGA+TGG 0.482076 8_3:-49437694 None:intergenic
GAAGGCAGAAGGTGCACTTA+AGG 0.485117 8_3:+49437210 Msa1292830:CDS
TGGGAAGCGCGTTTATAAAT+GGG 0.485728 8_3:+49435091 Msa1292830:CDS
GTTCCATCATCTGAGACAAT+AGG 0.486056 8_3:+49437691 Msa1292830:CDS
GGTGTAGACATTCCTTCAAA+AGG 0.486586 8_3:-49438088 None:intergenic
TTATCCGAAGCAATCTCAAT+TGG 0.493361 8_3:+49437646 Msa1292830:CDS
TCTACCAATTGAGATTGCTT+CGG 0.494263 8_3:-49437650 None:intergenic
CCAAATCAATATGTATAGCT+TGG 0.496342 8_3:-49436748 None:intergenic
AGTTTCTAATTACATTGTAT+GGG 0.497547 8_3:+49437275 Msa1292830:CDS
GTCCATCATTCAAGAAATGA+AGG 0.501806 8_3:+49437006 Msa1292830:CDS
GCGGAATGCAGACTTTAAGT+TGG 0.503435 8_3:+49437612 Msa1292830:CDS
ACGGTCGAGTCACTGGAGAT+TGG 0.505652 8_3:+49437137 Msa1292830:CDS
ATTAGAACTTATGCCGCTGC+TGG 0.507177 8_3:+49437826 Msa1292830:CDS
GAGCAAGAGAAGGATGTTGA+TGG 0.508667 8_3:+49437733 Msa1292830:CDS
GAAAGAATCAAAAGCGGAAG+AGG 0.509644 8_3:-49434827 None:intergenic
ATGTCTCTGATGCAACGTTA+CGG 0.511411 8_3:+49434945 Msa1292830:CDS
ATCTCAATTGGTAGAGGGAA+TGG 0.512168 8_3:+49437658 Msa1292830:CDS
AAGGAGCGTGCTCGGAGGAG+GGG 0.512913 8_3:+49437541 Msa1292830:CDS
TATATGAGGTCTATAGGGTC+TGG 0.513859 8_3:+49437311 Msa1292830:CDS
ATATGCAAAATTAGATATGC+TGG 0.523030 8_3:+49437501 Msa1292830:CDS
CGCTTAAGAAGCTGAGACAA+CGG 0.525030 8_3:+49435126 Msa1292830:CDS
ATAATAAGAAAGATAAATCA+AGG 0.525713 8_3:-49438145 None:intergenic
TGCAGACTTTAAGTTGGCGG+TGG 0.532018 8_3:+49437618 Msa1292830:CDS
AAAAGAATCATGAGGTTGCA+TGG 0.532660 8_3:-49438168 None:intergenic
CAGAGAAATGTTTCCGTGAG+TGG 0.534189 8_3:+49437425 Msa1292830:CDS
TGTGGAATCTGTTGGGGAAG+AGG 0.535027 8_3:+49437789 Msa1292830:CDS
GGAGAAGGCTGAAGAACTAA+AGG 0.536610 8_3:+49437522 Msa1292830:CDS
AAGAACTAAAGGAGCGTGCT+CGG 0.537452 8_3:+49437533 Msa1292830:CDS
TAGAGGGAATGGTGAAAAGT+GGG 0.538860 8_3:+49437669 Msa1292830:CDS
GGGTTATTGATGAGATGAAG+AGG 0.539631 8_3:+49437113 Msa1292830:CDS
TTCATTTCTTGAATGATGGA+CGG 0.540856 8_3:-49437004 None:intergenic
GTAGAGGGAATGGTGAAAAG+TGG 0.542141 8_3:+49437668 Msa1292830:CDS
TTAATCAGTTTATTAAGAGT+GGG 0.543698 8_3:+49435072 Msa1292830:CDS
CACTTAAGGAATTGGAAAAG+AGG 0.555566 8_3:+49437224 Msa1292830:CDS
GGTCTGGCGGTCTCTTAGGT+TGG 0.556962 8_3:+49437327 Msa1292830:CDS
GAATGCAGACTTTAAGTTGG+CGG 0.558777 8_3:+49437615 Msa1292830:CDS
GAAGCAATCTCAATTGGTAG+AGG 0.560595 8_3:+49437652 Msa1292830:CDS
TATGAAACGACGATTGAAGA+TGG 0.562202 8_3:+49437864 Msa1292830:CDS
GGTTATTGATGAGATGAAGA+GGG 0.563994 8_3:+49437114 Msa1292830:CDS
AAAATTAGATATGCTGGAGA+AGG 0.565481 8_3:+49437507 Msa1292830:CDS
GAAAATAGGCAAAGTATATG+AGG 0.565787 8_3:+49437297 Msa1292830:CDS
AAGGAATTGGAAAAGAGGAA+TGG 0.570113 8_3:+49437229 Msa1292830:CDS
GGAGCGTGCTCGGAGGAGGG+GGG 0.575173 8_3:+49437543 Msa1292830:CDS
TACTTGAAACTCTTCAAAGA+CGG 0.580431 8_3:+49435020 Msa1292830:CDS
AGAGAAATGTTTCCGTGAGT+GGG 0.581496 8_3:+49437426 Msa1292830:CDS
CGAAATCTTGAAGAAATCTG+TGG 0.586042 8_3:+49437771 Msa1292830:CDS
CTGAGAAACCATATAATGGT+TGG 0.586834 8_3:-49438109 None:intergenic
GGAAACATTTCTCTGCTCCT+GGG 0.587345 8_3:-49437417 None:intergenic
GAACTTATGCCGCTGCTGGT+AGG 0.590784 8_3:+49437830 Msa1292830:CDS
GATTTGGTTGCAAAAGCTAG+AGG 0.596922 8_3:+49436764 Msa1292830:CDS
AATTTACATGAATCACTCCT+CGG 0.599378 8_3:-49437935 None:intergenic
TGCAGCTCGACTCCCACTCA+CGG 0.604824 8_3:-49437438 None:intergenic
ATGTATAGCTTGGTCACTGA+CGG 0.607677 8_3:-49436738 None:intergenic
CATCAACATAAATAGACGCA+AGG 0.616654 8_3:-49437174 None:intergenic
TTGAAACTCTTCAAAGACGG+TGG 0.620058 8_3:+49435023 Msa1292830:CDS
AACATGTTTGAGAAGGCAGA+AGG 0.623532 8_3:+49437199 Msa1292830:CDS
AAGCAATCTCAATTGGTAGA+GGG 0.624857 8_3:+49437653 Msa1292830:CDS
GAAGGCTAGCAATATCATGC+CGG 0.629396 8_3:+49437024 Msa1292830:CDS
AGCACTTGTCCTACCAGCAG+CGG 0.633534 8_3:-49437839 None:intergenic
GAAGCACTACGAGCAAGAGA+AGG 0.634627 8_3:+49437723 Msa1292830:CDS
GTTAACTTGAAAGATCTCCC+AGG 0.640592 8_3:+49437400 Msa1292830:CDS
TTATAAGACAGTGAACTCAA+AGG 0.644951 8_3:-49436935 None:intergenic
TGATGCTAACATGTTTGAGA+AGG 0.651168 8_3:+49437192 Msa1292830:CDS
GTTGCAGCTATCAGAAACAA+TGG 0.654586 8_3:+49436694 Msa1292830:intron
ATGAGGTCTATAGGGTCTGG+CGG 0.666314 8_3:+49437314 Msa1292830:CDS
TTTCTGGAAAGAATCAAAAG+CGG 0.669275 8_3:-49434833 None:intergenic
TATCAGAAACAATGGCCAAG+AGG 0.670222 8_3:+49436702 Msa1292830:CDS
ATTGATGAGATGAAGAGGGA+CGG 0.670634 8_3:+49437118 Msa1292830:CDS
GAAATCTGTGGAATCTGTTG+GGG 0.676021 8_3:+49437783 Msa1292830:CDS
GTTGCTTGAGGCTATATCCG+AGG 0.682538 8_3:+49437918 Msa1292830:CDS
TTGATGACTGATAAAGCTGA+AGG 0.689860 8_3:+49436881 Msa1292830:CDS
AGATGCCCAGAAGTTGCTTG+AGG 0.693369 8_3:+49437906 Msa1292830:CDS
AACTAAAGGAGCGTGCTCGG+AGG 0.698646 8_3:+49437536 Msa1292830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTGTTAATTTTTTTTT+TGG + chr8_3:49436327-49436346 Msa1292830:intron 10.0%
!! TGAAAAATAAGATTATGTAT+TGG + chr8_3:49435237-49435256 Msa1292830:intron 15.0%
!! TTATTAATTTATGTTCTGTT+TGG + chr8_3:49435321-49435340 Msa1292830:intron 15.0%
!! AATAAAATGATATATTAGCT+TGG + chr8_3:49436188-49436207 Msa1292830:intron 15.0%
!!! ATAAAATGATATATTAGCTT+GGG + chr8_3:49436189-49436208 Msa1292830:intron 15.0%
!! ATAATAAGAAAGATAAATCA+AGG - chr8_3:49438148-49438167 None:intergenic 15.0%
!! TTAATCAGTTTATTAAGAGT+GGG + chr8_3:49435072-49435091 Msa1292830:CDS 20.0%
!! TTCTTTCTGTATGTAAAATT+GGG + chr8_3:49435281-49435300 Msa1292830:intron 20.0%
!! GAAATTATTAAAACAGCTTA+TGG - chr8_3:49435537-49435556 None:intergenic 20.0%
!! AAATGCTTATGATATGAATT+TGG + chr8_3:49435660-49435679 Msa1292830:intron 20.0%
!! CATATACACTTAACATATAA+GGG + chr8_3:49435768-49435787 Msa1292830:intron 20.0%
!!! TTGGGTTAACTTTTTTTTTT+GGG - chr8_3:49436114-49436133 None:intergenic 20.0%
!!! TTTGGGTTAACTTTTTTTTT+TGG - chr8_3:49436115-49436134 None:intergenic 20.0%
!! TATCATAGAATCATAAAATG+AGG + chr8_3:49436231-49436250 Msa1292830:intron 20.0%
!!! TTAATTTTTTTTTTGGTGTG+TGG + chr8_3:49436334-49436353 Msa1292830:intron 20.0%
!! TGTTCCATAATTTATATTCA+TGG + chr8_3:49436652-49436671 Msa1292830:intron 20.0%
!! TTCTCCATGAATATAAATTA+TGG - chr8_3:49436659-49436678 None:intergenic 20.0%
!! ATTCTTACACATATAATGTA+TGG + chr8_3:49437047-49437066 Msa1292830:CDS 20.0%
!! AGTTTCTAATTACATTGTAT+GGG + chr8_3:49437275-49437294 Msa1292830:CDS 20.0%
!!! AAAAACTTGGGAAATATTTT+TGG + chr8_3:49437579-49437598 Msa1292830:CDS 20.0%
!!! TCAATTTAAACATTTTGAAG+TGG + chr8_3:49438010-49438029 Msa1292830:three_prime_UTR 20.0%
!! CTTATATTGAAAACCATATA+CGG - chr8_3:49438042-49438061 None:intergenic 20.0%
!!! TATATGGTTTTCAATATAAG+AGG + chr8_3:49438042-49438061 Msa1292830:three_prime_UTR 20.0%
! TTGATTCTTTCCAGAAAATT+AGG + chr8_3:49434839-49434858 Msa1292830:five_prime_UTR 25.0%
! CTTAATCAGTTTATTAAGAG+TGG + chr8_3:49435071-49435090 Msa1292830:CDS 25.0%
!!! TACATTTAAGCGCTTTTTTT+AGG + chr8_3:49435180-49435199 Msa1292830:intron 25.0%
!!! AATAAGATTATGTATTGGCT+TGG + chr8_3:49435242-49435261 Msa1292830:intron 25.0%
! GTTCTTTCTGTATGTAAAAT+TGG + chr8_3:49435280-49435299 Msa1292830:intron 25.0%
! TGTATGTAAAATTGGGTTAA+AGG + chr8_3:49435288-49435307 Msa1292830:intron 25.0%
! GTATGTAAAATTGGGTTAAA+GGG + chr8_3:49435289-49435308 Msa1292830:intron 25.0%
!! TAAGTTTCCATTAACTGTTT+TGG + chr8_3:49435471-49435490 Msa1292830:intron 25.0%
! AAATTCTCCAAAACAGTTAA+TGG - chr8_3:49435481-49435500 None:intergenic 25.0%
! TTTGGAGAATTTATGAAAGT+AGG + chr8_3:49435489-49435508 Msa1292830:intron 25.0%
! GCTATATCTATATGTTTCTT+AGG + chr8_3:49435708-49435727 Msa1292830:intron 25.0%
! GCATATACACTTAACATATA+AGG + chr8_3:49435767-49435786 Msa1292830:intron 25.0%
!! ACTAAGTTGAAAAAAATCGA+TGG + chr8_3:49435891-49435910 Msa1292830:intron 25.0%
! ATGACTCTTTATACTAAAGT+AGG + chr8_3:49436965-49436984 Msa1292830:CDS 25.0%
! ACATTATATGTGTAAGAATC+CGG - chr8_3:49437046-49437065 None:intergenic 25.0%
! CAGTTTCTAATTACATTGTA+TGG + chr8_3:49437274-49437293 Msa1292830:CDS 25.0%
! ATTACATTGTATGGGAAAAT+AGG + chr8_3:49437283-49437302 Msa1292830:CDS 25.0%
! AAGCTATTTGAATATGATTC+AGG + chr8_3:49437372-49437391 Msa1292830:CDS 25.0%
!!! TTTGAATATGATTCAGGTTT+TGG + chr8_3:49437378-49437397 Msa1292830:CDS 25.0%
! ATATGCAAAATTAGATATGC+TGG + chr8_3:49437501-49437520 Msa1292830:CDS 25.0%
!!! TATTTTTGGATTACCATTTG+CGG + chr8_3:49437593-49437612 Msa1292830:CDS 25.0%
! TATACTGAGAAACCATATAA+TGG - chr8_3:49438116-49438135 None:intergenic 25.0%
! TTTCTGGAAAGAATCAAAAG+CGG - chr8_3:49434836-49434855 None:intergenic 30.0%
TACTTGAAACTCTTCAAAGA+CGG + chr8_3:49435020-49435039 Msa1292830:CDS 30.0%
ATTATATCAACCTGCTCTTA+AGG + chr8_3:49435151-49435170 Msa1292830:CDS 30.0%
TGTAAAAATACCTTAAGAGC+AGG - chr8_3:49435164-49435183 None:intergenic 30.0%
TCAAATTAGCCAATCTAGAA+GGG + chr8_3:49435596-49435615 Msa1292830:intron 30.0%
GAGTTGTAGTTTAGGAATTA+TGG + chr8_3:49435624-49435643 Msa1292830:intron 30.0%
!! TTAGCTATAAGCTGTTTTCA+TGG + chr8_3:49435847-49435866 Msa1292830:intron 30.0%
!! TAGCTATAAGCTGTTTTCAT+GGG + chr8_3:49435848-49435867 Msa1292830:intron 30.0%
AAGCATTTATGAGCATGTTT+GGG - chr8_3:49435946-49435965 None:intergenic 30.0%
TAAGCATTTATGAGCATGTT+TGG - chr8_3:49435947-49435966 None:intergenic 30.0%
ACCTAGAAACACACAAATTT+GGG - chr8_3:49436132-49436151 None:intergenic 30.0%
AACCTAGAAACACACAAATT+TGG - chr8_3:49436133-49436152 None:intergenic 30.0%
! ATGATATATTAGCTTGGGTT+TGG + chr8_3:49436194-49436213 Msa1292830:intron 30.0%
!!! AAAATGAGGTTTTGAAGTGT+TGG + chr8_3:49436245-49436264 Msa1292830:intron 30.0%
! GTTTTTCTGCATAATTTAGC+TGG + chr8_3:49436304-49436323 Msa1292830:intron 30.0%
TAATATCCAAGCAGAACTAA+AGG - chr8_3:49436365-49436384 None:intergenic 30.0%
TCTGCTTGGATATTAATATC+AGG + chr8_3:49436370-49436389 Msa1292830:intron 30.0%
ATTGCTTATAGTGTGGTTAT+AGG + chr8_3:49436440-49436459 Msa1292830:intron 30.0%
! GTATGTTGATGTTGATTATG+TGG + chr8_3:49436570-49436589 Msa1292830:intron 30.0%
CCAAATCAATATGTATAGCT+TGG - chr8_3:49436751-49436770 None:intergenic 30.0%
! CCAAGCTATACATATTGATT+TGG + chr8_3:49436748-49436767 Msa1292830:CDS 30.0%
!! AGGTGTCATTGAAAAAATGA+AGG + chr8_3:49436901-49436920 Msa1292830:CDS 30.0%
TTATAAGACAGTGAACTCAA+AGG - chr8_3:49436938-49436957 None:intergenic 30.0%
! TTCATTTCTTGAATGATGGA+CGG - chr8_3:49437007-49437026 None:intergenic 30.0%
!! ATGATATTTCTGGTGTTGAA+AGG + chr8_3:49437092-49437111 Msa1292830:CDS 30.0%
!! TGATATTTCTGGTGTTGAAA+GGG + chr8_3:49437093-49437112 Msa1292830:CDS 30.0%
GAAAATAGGCAAAGTATATG+AGG + chr8_3:49437297-49437316 Msa1292830:CDS 30.0%
CAAAGTATATGAGGTCTATA+GGG + chr8_3:49437306-49437325 Msa1292830:CDS 30.0%
! TAGCTTATGTTTGCAGTTTT+AGG - chr8_3:49437358-49437377 None:intergenic 30.0%
!!! GAGTTGCAAATGTTTTGATA+GGG + chr8_3:49437476-49437495 Msa1292830:CDS 30.0%
!!! AGTTGCAAATGTTTTGATAG+GGG + chr8_3:49437477-49437496 Msa1292830:CDS 30.0%
AAAATTAGATATGCTGGAGA+AGG + chr8_3:49437507-49437526 Msa1292830:CDS 30.0%
! ATTTCCCAAGTTTTTGCATT+AGG - chr8_3:49437574-49437593 None:intergenic 30.0%
AATTTACATGAATCACTCCT+CGG - chr8_3:49437938-49437957 None:intergenic 30.0%
! ATGGTTTTCAATATAAGAGG+TGG + chr8_3:49438045-49438064 Msa1292830:three_prime_UTR 30.0%
! GAAAGCGAAACCTAATTTTC+TGG - chr8_3:49434852-49434871 None:intergenic 35.0%
! AGTGAACACTTTTGAATCTC+CGG + chr8_3:49434888-49434907 Msa1292830:five_prime_UTR 35.0%
TTGAGCTTATCTACATGCAT+AGG - chr8_3:49435580-49435599 None:intergenic 35.0%
CTCAAATTAGCCAATCTAGA+AGG + chr8_3:49435595-49435614 Msa1292830:intron 35.0%
ACCCAAATTTGTGTGTTTCT+AGG + chr8_3:49436128-49436147 Msa1292830:intron 35.0%
GCTTGGATATTAATATCAGG+TGG + chr8_3:49436373-49436392 Msa1292830:intron 35.0%
TGGATATTAATATCAGGTGG+TGG + chr8_3:49436376-49436395 Msa1292830:intron 35.0%
GGATATTAATATCAGGTGGT+GGG + chr8_3:49436377-49436396 Msa1292830:intron 35.0%
!!! GTTTTGGTTCCTTTTGCAAT+TGG + chr8_3:49436401-49436420 Msa1292830:intron 35.0%
AGCACAAAACCAATTGCAAA+AGG - chr8_3:49436413-49436432 None:intergenic 35.0%
!!! TTTGCAATTGGTTTTGTGCT+AGG + chr8_3:49436413-49436432 Msa1292830:intron 35.0%
!!! TTGCAATTGGTTTTGTGCTA+GGG + chr8_3:49436414-49436433 Msa1292830:intron 35.0%
CAATCAAACCTCCTTAAAAC+AGG - chr8_3:49436476-49436495 None:intergenic 35.0%
GTTTGATTGTTCATTCTGTG+TGG + chr8_3:49436487-49436506 Msa1292830:intron 35.0%
!!! TGTCTGTTTTTGGTCTTTTG+TGG + chr8_3:49436511-49436530 Msa1292830:intron 35.0%
! GTCTTTTGTGGTTTCTGATT+TGG + chr8_3:49436523-49436542 Msa1292830:intron 35.0%
GGTCTTTATCATATTCCTCT+TGG - chr8_3:49436720-49436739 None:intergenic 35.0%
! TTGATGACTGATAAAGCTGA+AGG + chr8_3:49436881-49436900 Msa1292830:CDS 35.0%
GTCCATCATTCAAGAAATGA+AGG + chr8_3:49437006-49437025 Msa1292830:CDS 35.0%
AGCCTTCATTTCTTGAATGA+TGG - chr8_3:49437011-49437030 None:intergenic 35.0%
GCTGCAGTTAATGATATTTC+TGG + chr8_3:49437082-49437101 Msa1292830:CDS 35.0%
GGTTATTGATGAGATGAAGA+GGG + chr8_3:49437114-49437133 Msa1292830:CDS 35.0%
CATCAACATAAATAGACGCA+AGG - chr8_3:49437177-49437196 None:intergenic 35.0%
TGATGCTAACATGTTTGAGA+AGG + chr8_3:49437192-49437211 Msa1292830:CDS 35.0%
CACTTAAGGAATTGGAAAAG+AGG + chr8_3:49437224-49437243 Msa1292830:CDS 35.0%
AAGGAATTGGAAAAGAGGAA+TGG + chr8_3:49437229-49437248 Msa1292830:CDS 35.0%
GCAAAGTATATGAGGTCTAT+AGG + chr8_3:49437305-49437324 Msa1292830:CDS 35.0%
!!! CGAGTTGCAAATGTTTTGAT+AGG + chr8_3:49437475-49437494 Msa1292830:CDS 35.0%
CAAGCCTAATGCAAAAACTT+GGG + chr8_3:49437567-49437586 Msa1292830:CDS 35.0%
TTATCCGAAGCAATCTCAAT+TGG + chr8_3:49437646-49437665 Msa1292830:CDS 35.0%
TCTACCAATTGAGATTGCTT+CGG - chr8_3:49437653-49437672 None:intergenic 35.0%
AAGCAATCTCAATTGGTAGA+GGG + chr8_3:49437653-49437672 Msa1292830:CDS 35.0%
ATACCTATTGTCTCAGATGA+TGG - chr8_3:49437697-49437716 None:intergenic 35.0%
CGAAATCTTGAAGAAATCTG+TGG + chr8_3:49437771-49437790 Msa1292830:CDS 35.0%
AAGAAATCTGTGGAATCTGT+TGG + chr8_3:49437781-49437800 Msa1292830:CDS 35.0%
AGAAATCTGTGGAATCTGTT+GGG + chr8_3:49437782-49437801 Msa1292830:CDS 35.0%
TATGAAACGACGATTGAAGA+TGG + chr8_3:49437864-49437883 Msa1292830:CDS 35.0%
TGTCTACACCAACCATTATA+TGG + chr8_3:49438101-49438120 Msa1292830:three_prime_UTR 35.0%
CTGAGAAACCATATAATGGT+TGG - chr8_3:49438112-49438131 None:intergenic 35.0%
AAAAGAATCATGAGGTTGCA+TGG - chr8_3:49438171-49438190 None:intergenic 35.0%
GAAAGAATCAAAAGCGGAAG+AGG - chr8_3:49434830-49434849 None:intergenic 40.0%
! CGTTGCATCAGAGACATTTT+TGG - chr8_3:49434942-49434961 None:intergenic 40.0%
ATGTCTCTGATGCAACGTTA+CGG + chr8_3:49434945-49434964 Msa1292830:CDS 40.0%
TTGAAACTCTTCAAAGACGG+TGG + chr8_3:49435023-49435042 Msa1292830:CDS 40.0%
! TGGGAAGCGCGTTTATAAAT+GGG + chr8_3:49435091-49435110 Msa1292830:CDS 40.0%
CGCGTTTATAAATGGGAAGT+TGG + chr8_3:49435098-49435117 Msa1292830:CDS 40.0%
ACTCACTAACCCTTCTAGAT+TGG - chr8_3:49435608-49435627 None:intergenic 40.0%
! GGGTTAGTGAGTTGTAGTTT+AGG + chr8_3:49435616-49435635 Msa1292830:intron 40.0%
AAGTCAATCCAAAACCCACT+TGG + chr8_3:49435988-49436007 Msa1292830:intron 40.0%
AGTCAATCCAAAACCCACTT+GGG + chr8_3:49435989-49436008 Msa1292830:intron 40.0%
TTTCTCTCCGATGCCAATTT+CGG + chr8_3:49436072-49436091 Msa1292830:intron 40.0%
CCAAATTAGTGCACCGAAAT+TGG - chr8_3:49436088-49436107 None:intergenic 40.0%
! CCAATTTCGGTGCACTAATT+TGG + chr8_3:49436085-49436104 Msa1292830:intron 40.0%
! ATATTAGCTTGGGTTTGGAG+TGG + chr8_3:49436199-49436218 Msa1292830:intron 40.0%
!! TGTTGGTGTCAACCTTTGTT+AGG + chr8_3:49436262-49436281 Msa1292830:intron 40.0%
ACCTTTGTTAGGCAAGGTAA+AGG + chr8_3:49436273-49436292 Msa1292830:intron 40.0%
ACCTTTACCTTGCCTAACAA+AGG - chr8_3:49436277-49436296 None:intergenic 40.0%
!! GAATAGCCTTTAGTTCTGCT+TGG + chr8_3:49436356-49436375 Msa1292830:intron 40.0%
GCTTATAGTGTGGTTATAGG+TGG + chr8_3:49436443-49436462 Msa1292830:intron 40.0%
! GTGGATTTGTGCCTGTTTTA+AGG + chr8_3:49436462-49436481 Msa1292830:intron 40.0%
!!! GATTTGTGCCTGTTTTAAGG+AGG + chr8_3:49436465-49436484 Msa1292830:intron 40.0%
! TCTGTGTGGTTGTCTGTTTT+TGG + chr8_3:49436501-49436520 Msa1292830:intron 40.0%
!! TCTGATTTGGCTTAGACTCT+TGG + chr8_3:49436536-49436555 Msa1292830:intron 40.0%
! TCTCTAAATCTAGAGCTGCA+TGG - chr8_3:49436613-49436632 None:intergenic 40.0%
GTTGCAGCTATCAGAAACAA+TGG + chr8_3:49436694-49436713 Msa1292830:intron 40.0%
TATCAGAAACAATGGCCAAG+AGG + chr8_3:49436702-49436721 Msa1292830:CDS 40.0%
ATGTATAGCTTGGTCACTGA+CGG - chr8_3:49436741-49436760 None:intergenic 40.0%
! GATTTGGTTGCAAAAGCTAG+AGG + chr8_3:49436764-49436783 Msa1292830:CDS 40.0%
! AGATGATTTTTCGCAGACTC+GGG - chr8_3:49436824-49436843 None:intergenic 40.0%
! CAGATGATTTTTCGCAGACT+CGG - chr8_3:49436825-49436844 None:intergenic 40.0%
GCGAAAAATCATCTGTGCTA+TGG + chr8_3:49436830-49436849 Msa1292830:CDS 40.0%
!!! ATGATGGACGGAATCTTTTC+TGG - chr8_3:49436995-49437014 None:intergenic 40.0%
GGGTTATTGATGAGATGAAG+AGG + chr8_3:49437113-49437132 Msa1292830:CDS 40.0%
ATTGATGAGATGAAGAGGGA+CGG + chr8_3:49437118-49437137 Msa1292830:CDS 40.0%
AACATGTTTGAGAAGGCAGA+AGG + chr8_3:49437199-49437218 Msa1292830:CDS 40.0%
! AGAAGGTGCACTTAAGGAAT+TGG + chr8_3:49437216-49437235 Msa1292830:CDS 40.0%
TATATGAGGTCTATAGGGTC+TGG + chr8_3:49437311-49437330 Msa1292830:CDS 40.0%
! GTTAACTTGAAAGATCTCCC+AGG + chr8_3:49437400-49437419 Msa1292830:CDS 40.0%
AGAGAAATGTTTCCGTGAGT+GGG + chr8_3:49437426-49437445 Msa1292830:CDS 40.0%
! CCAAGTTTTTGCATTAGGCT+TGG - chr8_3:49437569-49437588 None:intergenic 40.0%
CCAAGCCTAATGCAAAAACT+TGG + chr8_3:49437566-49437585 Msa1292830:CDS 40.0%
TAAAGTCTGCATTCCGCAAA+TGG - chr8_3:49437609-49437628 None:intergenic 40.0%
!! GAATGCAGACTTTAAGTTGG+CGG + chr8_3:49437615-49437634 Msa1292830:CDS 40.0%
GAAGCAATCTCAATTGGTAG+AGG + chr8_3:49437652-49437671 Msa1292830:CDS 40.0%
ATCTCAATTGGTAGAGGGAA+TGG + chr8_3:49437658-49437677 Msa1292830:CDS 40.0%
TAGAGGGAATGGTGAAAAGT+GGG + chr8_3:49437669-49437688 Msa1292830:CDS 40.0%
! GTTCCATCATCTGAGACAAT+AGG + chr8_3:49437691-49437710 Msa1292830:CDS 40.0%
GAAATCTGTGGAATCTGTTG+GGG + chr8_3:49437783-49437802 Msa1292830:CDS 40.0%
TATAGCCTCAAGCAACTTCT+GGG - chr8_3:49437914-49437933 None:intergenic 40.0%
ATATAGCCTCAAGCAACTTC+TGG - chr8_3:49437915-49437934 None:intergenic 40.0%
! AGTCACTCATCTCCTTTTGA+AGG + chr8_3:49438076-49438095 Msa1292830:three_prime_UTR 40.0%
GGTGTAGACATTCCTTCAAA+AGG - chr8_3:49438091-49438110 None:intergenic 40.0%
TTCTCAGTGATGAGCGTAAC+CGG - chr8_3:49434910-49434929 None:intergenic 45.0%
! GTGGGAAGCGCGTTTATAAA+TGG + chr8_3:49435090-49435109 Msa1292830:CDS 45.0%
CGCTTAAGAAGCTGAGACAA+CGG + chr8_3:49435126-49435145 Msa1292830:CDS 45.0%
AATCCAAAACCCACTTGGGT+TGG + chr8_3:49435993-49436012 Msa1292830:intron 45.0%
AACGAACTTGAGACCTTGAG+AGG - chr8_3:49436054-49436073 None:intergenic 45.0%
TAGTGCACCGAAATTGGCAT+CGG - chr8_3:49436082-49436101 None:intergenic 45.0%
GTGTCAACCTTTGTTAGGCA+AGG + chr8_3:49436267-49436286 Msa1292830:intron 45.0%
!!! ATATCAGGTGGTGGGTGTTT+TGG + chr8_3:49436385-49436404 Msa1292830:intron 45.0%
!!! CAATTGGTTTTGTGCTAGGG+TGG + chr8_3:49436417-49436436 Msa1292830:intron 45.0%
!! AGGGTGGATTGCTTATAGTG+TGG + chr8_3:49436433-49436452 Msa1292830:intron 45.0%
GTTGATTATGTGGTCGTGTC+TGG + chr8_3:49436580-49436599 Msa1292830:intron 45.0%
! GATGATTTTTCGCAGACTCG+GGG - chr8_3:49436823-49436842 None:intergenic 45.0%
GAAGGCTAGCAATATCATGC+CGG + chr8_3:49437024-49437043 Msa1292830:CDS 45.0%
GGAAACATTTCTCTGCTCCT+GGG - chr8_3:49437420-49437439 None:intergenic 45.0%
CAGAGAAATGTTTCCGTGAG+TGG + chr8_3:49437425-49437444 Msa1292830:CDS 45.0%
GGAGAAGGCTGAAGAACTAA+AGG + chr8_3:49437522-49437541 Msa1292830:CDS 45.0%
! AAGAACTAAAGGAGCGTGCT+CGG + chr8_3:49437533-49437552 Msa1292830:CDS 45.0%
GCGGAATGCAGACTTTAAGT+TGG + chr8_3:49437612-49437631 Msa1292830:CDS 45.0%
GTAGAGGGAATGGTGAAAAG+TGG + chr8_3:49437668-49437687 Msa1292830:CDS 45.0%
GAGCAAGAGAAGGATGTTGA+TGG + chr8_3:49437733-49437752 Msa1292830:CDS 45.0%
ATTAGAACTTATGCCGCTGC+TGG + chr8_3:49437826-49437845 Msa1292830:CDS 45.0%
! GAAGGCAGAAGGTGCACTTA+AGG + chr8_3:49437210-49437229 Msa1292830:CDS 50.0%
ATGAGGTCTATAGGGTCTGG+CGG + chr8_3:49437314-49437333 Msa1292830:CDS 50.0%
CGGAAACATTTCTCTGCTCC+TGG - chr8_3:49437421-49437440 None:intergenic 50.0%
!! TGCAGACTTTAAGTTGGCGG+TGG + chr8_3:49437618-49437637 Msa1292830:CDS 50.0%
! GAAGCACTACGAGCAAGAGA+AGG + chr8_3:49437723-49437742 Msa1292830:CDS 50.0%
TGTGGAATCTGTTGGGGAAG+AGG + chr8_3:49437789-49437808 Msa1292830:CDS 50.0%
AGATGCCCAGAAGTTGCTTG+AGG + chr8_3:49437906-49437925 Msa1292830:CDS 50.0%
GTTGCTTGAGGCTATATCCG+AGG + chr8_3:49437918-49437937 Msa1292830:CDS 50.0%
!! AGGCCAACCCAAGTGGGTTT+TGG - chr8_3:49435999-49436018 None:intergenic 55.0%
!! AAAACCCACTTGGGTTGGCC+TGG + chr8_3:49435998-49436017 Msa1292830:intron 55.0%
! TGGTGTGGGCTTGGTACCTT+GGG + chr8_3:49436021-49436040 Msa1292830:intron 55.0%
! CTTGAGAGGAGTACACCCCA+AGG - chr8_3:49436040-49436059 None:intergenic 55.0%
CTTGGGGTGTACTCCTCTCA+AGG + chr8_3:49436038-49436057 Msa1292830:intron 55.0%
ACGGTCGAGTCACTGGAGAT+TGG + chr8_3:49437137-49437156 Msa1292830:CDS 55.0%
ATAGGGTCTGGCGGTCTCTT+AGG + chr8_3:49437323-49437342 Msa1292830:CDS 55.0%
! AACTAAAGGAGCGTGCTCGG+AGG + chr8_3:49437536-49437555 Msa1292830:CDS 55.0%
GAACTTATGCCGCTGCTGGT+AGG + chr8_3:49437830-49437849 Msa1292830:CDS 55.0%
AGCACTTGTCCTACCAGCAG+CGG - chr8_3:49437842-49437861 None:intergenic 55.0%
GAAGTGGCGCATGCCGTATA+TGG + chr8_3:49438026-49438045 Msa1292830:three_prime_UTR 55.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8_3:49436005-49436024 None:intergenic 60.0%
!! TTGGGTTGGCCTGGTGGTGT+GGG + chr8_3:49436007-49436026 Msa1292830:intron 60.0%
! GTGGTGTGGGCTTGGTACCT+TGG + chr8_3:49436020-49436039 Msa1292830:intron 60.0%
! GGTGTGGGCTTGGTACCTTG+GGG + chr8_3:49436022-49436041 Msa1292830:intron 60.0%
AAGAGGGACGGTCGAGTCAC+TGG + chr8_3:49437130-49437149 Msa1292830:CDS 60.0%
GGTCTGGCGGTCTCTTAGGT+TGG + chr8_3:49437327-49437346 Msa1292830:CDS 60.0%
TGCAGCTCGACTCCCACTCA+CGG - chr8_3:49437441-49437460 None:intergenic 60.0%
! TAAAGGAGCGTGCTCGGAGG+AGG + chr8_3:49437539-49437558 Msa1292830:CDS 60.0%
! AAAGGAGCGTGCTCGGAGGA+GGG + chr8_3:49437540-49437559 Msa1292830:CDS 60.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8_3:49436001-49436020 Msa1292830:intron 65.0%
CACCACCAGGCCAACCCAAG+TGG - chr8_3:49436006-49436025 None:intergenic 65.0%
!! CTTGGGTTGGCCTGGTGGTG+TGG + chr8_3:49436006-49436025 Msa1292830:intron 65.0%
! TTGGCCTGGTGGTGTGGGCT+TGG + chr8_3:49436012-49436031 Msa1292830:intron 65.0%
GGTACCAAGCCCACACCACC+AGG - chr8_3:49436019-49436038 None:intergenic 65.0%
! AAGGAGCGTGCTCGGAGGAG+GGG + chr8_3:49437541-49437560 Msa1292830:CDS 65.0%
! AGGAGCGTGCTCGGAGGAGG+GGG + chr8_3:49437542-49437561 Msa1292830:CDS 70.0%
GGAGCGTGCTCGGAGGAGGG+GGG + chr8_3:49437543-49437562 Msa1292830:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 49434826 49438190 49434826 ID=Msa1292830;Name=Msa1292830
chr8_3 mRNA 49434826 49438190 49434826 ID=Msa1292830-mRNA-1;Parent=Msa1292830;Name=Msa1292830-mRNA-1;_AED=0.00;_eAED=0.00;_QI=119|1|1|1|0|1|2|245|490
chr8_3 exon 49434826 49435172 49434826 ID=Msa1292830-mRNA-1:exon:13705;Parent=Msa1292830-mRNA-1
chr8_3 exon 49436701 49438190 49436701 ID=Msa1292830-mRNA-1:exon:13706;Parent=Msa1292830-mRNA-1
chr8_3 five_prime_UTR 49434826 49434944 49434826 ID=Msa1292830-mRNA-1:five_prime_utr;Parent=Msa1292830-mRNA-1
chr8_3 CDS 49434945 49435172 49434945 ID=Msa1292830-mRNA-1:cds;Parent=Msa1292830-mRNA-1
chr8_3 CDS 49436701 49437945 49436701 ID=Msa1292830-mRNA-1:cds;Parent=Msa1292830-mRNA-1
chr8_3 three_prime_UTR 49437946 49438190 49437946 ID=Msa1292830-mRNA-1:three_prime_utr;Parent=Msa1292830-mRNA-1
Gene Sequence

>Msa1292830

ATGTCTCTGATGCAACGTTACGGAAAATGCAAAAGCGTTGTGAAACGATCAAAAAAGTACTTAGACGAAGCGCTTTACTTGAAACTCTTCAAAGACGGTGGTTCTGAACTTAACGTTCGTCAACAACTTAATCAGTTTATTAAGAGTGGGAAGCGCGTTTATAAATGGGAAGTTGGTGATACGCTTAAGAAGCTGAGACAACGGAAATTATATCAACCTGCTCTTAAGCTATCAGAAACAATGGCCAAGAGGAATATGATAAAGACCGTCAGTGACCAAGCTATACATATTGATTTGGTTGCAAAAGCTAGAGGTATTGTTGCTGCTGAAAAATATTTTATTGATCTCCCCGAGTCTGCGAAAAATCATCTGTGCTATGGTGCACTTCTCAACTGCTACTGCAAAGAGTTGATGACTGATAAAGCTGAAGGTGTCATTGAAAAAATGAAGGATCTTGACTTTCCTTTGAGTTCACTGTCTTATAATAGTCTTATGACTCTTTATACTAAAGTAGGTCAACCAGAAAAGATTCCGTCCATCATTCAAGAAATGAAGGCTAGCAATATCATGCCGGATTCTTACACATATAATGTATGGATGAGAGCTCTTGCTGCAGTTAATGATATTTCTGGTGTTGAAAGGGTTATTGATGAGATGAAGAGGGACGGTCGAGTCACTGGAGATTGGACAACATATAGCAACCTTGCGTCTATTTATGTTGATGCTAACATGTTTGAGAAGGCAGAAGGTGCACTTAAGGAATTGGAAAAGAGGAATGGTTACAAAGATCTTTCTGCTTATCAGTTTCTAATTACATTGTATGGGAAAATAGGCAAAGTATATGAGGTCTATAGGGTCTGGCGGTCTCTTAGGTTGGCATTTCCTAAAACTGCAAACATAAGCTATTTGAATATGATTCAGGTTTTGGTTAACTTGAAAGATCTCCCAGGAGCAGAGAAATGTTTCCGTGAGTGGGAGTCGAGCTGCAGTACTTATGATATTCGAGTTGCAAATGTTTTGATAGGGGCATATGCAAAATTAGATATGCTGGAGAAGGCTGAAGAACTAAAGGAGCGTGCTCGGAGGAGGGGGGCCAAGCCTAATGCAAAAACTTGGGAAATATTTTTGGATTACCATTTGCGGAATGCAGACTTTAAGTTGGCGGTGGATTGTTTATCCGAAGCAATCTCAATTGGTAGAGGGAATGGTGAAAAGTGGGTTCCATCATCTGAGACAATAGGTATTATGATGAAGCACTACGAGCAAGAGAAGGATGTTGATGGTGCAGAAGAATTCATCGAAATCTTGAAGAAATCTGTGGAATCTGTTGGGGAAGAGGTGTTTGAATCATTGATTAGAACTTATGCCGCTGCTGGTAGGACAAGTGCTGCTATGAAACGACGATTGAAGATGGAAAATGTGAACGTGAATGAAGATGCCCAGAAGTTGCTTGAGGCTATATCCGAGGAGTGA

Protein sequence

>Msa1292830

MSLMQRYGKCKSVVKRSKKYLDEALYLKLFKDGGSELNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYQPALKLSETMAKRNMIKTVSDQAIHIDLVAKARGIVAAEKYFIDLPESAKNHLCYGALLNCYCKELMTDKAEGVIEKMKDLDFPLSSLSYNSLMTLYTKVGQPEKIPSIIQEMKASNIMPDSYTYNVWMRALAAVNDISGVERVIDEMKRDGRVTGDWTTYSNLASIYVDANMFEKAEGALKELEKRNGYKDLSAYQFLITLYGKIGKVYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWESSCSTYDIRVANVLIGAYAKLDMLEKAEELKERARRRGAKPNAKTWEIFLDYHLRNADFKLAVDCLSEAISIGRGNGEKWVPSSETIGIMMKHYEQEKDVDGAEEFIEILKKSVESVGEEVFESLIRTYAAAGRTSAAMKRRLKMENVNVNEDAQKLLEAISEE*