Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694710 | XP_024636120.1 | 93.856 | 472 | 13 | 1 | 1 | 472 | 1 | 456 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694710 | A0A072UPJ1 | 93.856 | 472 | 13 | 1 | 1 | 472 | 1 | 456 | 0.0 | 910 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0612040 | Msa0694710 | 0.831327 | 1.777852e-55 | -8.615850e-47 |
| Msa0652160 | Msa0694710 | 0.838209 | 3.294468e-57 | -8.615850e-47 |
| Msa0694710 | Msa0708630 | 0.810964 | 8.869063e-51 | -8.615850e-47 |
| Msa0694710 | Msa0929700 | 0.801970 | 7.001672e-49 | -8.615850e-47 |
| Msa0694710 | Msa1220580 | 0.817779 | 2.761920e-52 | -8.615850e-47 |
| Msa0694710 | Msa1334560 | 0.810902 | 9.149085e-51 | -8.615850e-47 |
| Msa0132460 | Msa0694710 | 0.811114 | 8.230057e-51 | -8.615850e-47 |
| Msa0134580 | Msa0694710 | 0.816330 | 5.847052e-52 | -8.615850e-47 |
| Msa0182050 | Msa0694710 | 0.809127 | 2.205770e-50 | -8.615850e-47 |
| Msa0192050 | Msa0694710 | 0.808697 | 2.726387e-50 | -8.615850e-47 |
| Msa0356640 | Msa0694710 | 0.814458 | 1.525277e-51 | -8.615850e-47 |
| Msa0495620 | Msa0694710 | 0.816658 | 4.936809e-52 | -8.615850e-47 |
| Msa0556620 | Msa0694710 | 0.807365 | 5.236956e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694710 | MtrunA17_Chr4g0045601 | 93.856 | 472 | 13 | 1 | 1 | 472 | 1 | 456 | 0.0 | 910 |
| Msa0694710 | MtrunA17_Chr4g0045591 | 57.241 | 290 | 105 | 5 | 1 | 288 | 1 | 273 | 1.17e-87 | 270 |
| Msa0694710 | MtrunA17_Chr8g0335221 | 33.113 | 302 | 174 | 7 | 25 | 310 | 53 | 342 | 5.17e-40 | 148 |
| Msa0694710 | MtrunA17_Chr7g0215661 | 33.684 | 285 | 164 | 9 | 14 | 290 | 48 | 315 | 5.08e-31 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694710 | AT3G59670.1 | 41.273 | 487 | 222 | 19 | 25 | 472 | 56 | 517 | 1.88e-82 | 264 |
| Msa0694710 | AT4G37440.3 | 35.231 | 281 | 163 | 8 | 24 | 301 | 68 | 332 | 6.87e-37 | 140 |
| Msa0694710 | AT4G37440.2 | 35.231 | 281 | 163 | 8 | 24 | 301 | 68 | 332 | 7.02e-37 | 141 |
| Msa0694710 | AT4G37440.1 | 35.231 | 281 | 163 | 8 | 24 | 301 | 68 | 332 | 1.28e-36 | 140 |
| Msa0694710 | AT3G50040.3 | 33.149 | 181 | 106 | 6 | 100 | 273 | 108 | 280 | 1.63e-20 | 93.6 |
| Msa0694710 | AT3G50040.2 | 33.149 | 181 | 106 | 6 | 100 | 273 | 108 | 280 | 2.80e-20 | 93.2 |
| Msa0694710 | AT3G50040.4 | 33.149 | 181 | 106 | 6 | 100 | 273 | 108 | 280 | 2.80e-20 | 93.2 |
| Msa0694710 | AT3G50040.1 | 33.149 | 181 | 106 | 6 | 100 | 273 | 108 | 280 | 2.80e-20 | 93.2 |
Find 124 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAAGTTTGCGTTAATTA+AGG | 0.236636 | 4_4:+64056423 | Msa0694710:five_prime_UTR |
| AGAAAACCTCGAAACATTTC+TGG | 0.246323 | 4_4:-64058421 | None:intergenic |
| CTCTGATGTGGCGTCTAAAA+TGG | 0.252327 | 4_4:+64057538 | Msa0694710:CDS |
| CTGTACTTGTGACTTGAAAA+TGG | 0.264924 | 4_4:-64057693 | None:intergenic |
| TGAACTTCAGGAGGTGAAAA+TGG | 0.307775 | 4_4:+64059233 | Msa0694710:CDS |
| AGTCTTATTCACTGATTATC+AGG | 0.308225 | 4_4:-64059471 | None:intergenic |
| GACAGCTGTGTTTCAAGCTT+TGG | 0.311111 | 4_4:+64058615 | Msa0694710:CDS |
| TTTCACCTCCTGAAGCTTCT+GGG | 0.320720 | 4_4:-64059277 | None:intergenic |
| GTCTGATGCTGATGGCTCTT+TGG | 0.338203 | 4_4:+64057947 | Msa0694710:CDS |
| TGTTCTGATGCATGAACTTC+AGG | 0.338964 | 4_4:+64059221 | Msa0694710:CDS |
| GCAAGCCCTCATGATACTTT+TGG | 0.339612 | 4_4:+64056730 | Msa0694710:CDS |
| AATTTGCTTGAGTCTTATTT+CGG | 0.351566 | 4_4:-64057562 | None:intergenic |
| TCTGTTCTTGATGAACAAAT+TGG | 0.353691 | 4_4:+64056502 | Msa0694710:CDS |
| CAATCCCACCCAGAAGCTTC+AGG | 0.360739 | 4_4:+64059269 | Msa0694710:CDS |
| CCATTCCCAGCAGAATTTGT+AGG | 0.379539 | 4_4:-64058504 | None:intergenic |
| TGAGAGCACTGTTGGTTTGT+TGG | 0.381844 | 4_4:+64058665 | Msa0694710:CDS |
| GGAATTAAAGTCACCTTGTT+CGG | 0.384584 | 4_4:-64056762 | None:intergenic |
| CTTGAATATTCAGTTGCATC+AGG | 0.386365 | 4_4:-64056616 | None:intergenic |
| GGAGAGCGCAAAGCTGGTTC+AGG | 0.394425 | 4_4:+64059420 | Msa0694710:CDS |
| TCGGCCTTGGTTGCCGACTC+TGG | 0.398219 | 4_4:+64058711 | Msa0694710:CDS |
| TTTGAACAGGTAAACTAAAA+GGG | 0.407879 | 4_4:+64056399 | Msa0694710:intron |
| TCCTTAATTAACGCAAACTT+TGG | 0.410676 | 4_4:-64056424 | None:intergenic |
| GCACATCACCATGAAGAATA+AGG | 0.413362 | 4_4:-64058461 | None:intergenic |
| ACCTCCTGAAGCTTCTGGGT+GGG | 0.414016 | 4_4:-64059273 | None:intergenic |
| CTGGTTAATATTCGTGCTCC+TGG | 0.419824 | 4_4:+64059785 | Msa0694710:three_prime_UTR |
| TGTCACCCTCCAATCGGCCT+TGG | 0.422704 | 4_4:+64058698 | Msa0694710:CDS |
| AAGGAGAAGGCGGAAGAGAA+AGG | 0.427652 | 4_4:+64056442 | Msa0694710:five_prime_UTR |
| ACAGTGCTCTCAATTATATC+AGG | 0.430041 | 4_4:-64058654 | None:intergenic |
| AGAAGCTTCAGGAGGTGAAA+AGG | 0.432992 | 4_4:+64059280 | Msa0694710:CDS |
| GAAGTGGATTCAGAGTTCTT+TGG | 0.433390 | 4_4:+64056694 | Msa0694710:CDS |
| AGTATTACAGTGTCATTTCC+CGG | 0.434495 | 4_4:+64059607 | Msa0694710:three_prime_UTR |
| AGAGGAAGTTGACAGATCAT+TGG | 0.438955 | 4_4:+64057499 | Msa0694710:CDS |
| CATGGCCAATCCCGTCGTTA+AGG | 0.441041 | 4_4:+64056474 | Msa0694710:exon |
| TTTAAATAAGATGTCAACTT+GGG | 0.449583 | 4_4:-64059565 | None:intergenic |
| CACTGATTATCAGGTTCCCC+AGG | 0.452914 | 4_4:-64059462 | None:intergenic |
| CAAAGTCCTACAAATTCTGC+TGG | 0.460562 | 4_4:+64058498 | Msa0694710:CDS |
| CTCAATTATATCAGGAATGC+TGG | 0.465235 | 4_4:-64058646 | None:intergenic |
| CCTACAAATTCTGCTGGGAA+TGG | 0.476255 | 4_4:+64058504 | Msa0694710:CDS |
| TCAATTGAAAATGAAGACAT+AGG | 0.478092 | 4_4:-64059684 | None:intergenic |
| GATATAATTGAGAGCACTGT+TGG | 0.485330 | 4_4:+64058657 | Msa0694710:CDS |
| GTACCTGAGGAGTGAGATGA+TGG | 0.488743 | 4_4:-64055776 | None:intergenic |
| TTGAACAGGTAAACTAAAAG+GGG | 0.489450 | 4_4:+64056400 | Msa0694710:intron |
| AGTGTCATTTCCCGGGGAAG+AGG | 0.491709 | 4_4:+64059615 | Msa0694710:three_prime_UTR |
| GTTACAGTCACAACAGATAG+TGG | 0.495932 | 4_4:-64059518 | None:intergenic |
| GTTTAAATAAGATGTCAACT+TGG | 0.498408 | 4_4:-64059566 | None:intergenic |
| AAAGTATAGTTCCTCTTCCC+CGG | 0.499685 | 4_4:-64059626 | None:intergenic |
| ACGGCATCTGTTGGAGTTGG+AGG | 0.501116 | 4_4:+64058531 | Msa0694710:CDS |
| AATGGATACACGGCATCTGT+TGG | 0.502595 | 4_4:+64058522 | Msa0694710:CDS |
| GAAGCTTCAGGAGGTGAAAA+GGG | 0.504312 | 4_4:+64059281 | Msa0694710:CDS |
| AAGCTTGAAACACAGCTGTC+AGG | 0.505459 | 4_4:-64058612 | None:intergenic |
| ACATTGAAAATCTACAATGT+AGG | 0.506632 | 4_4:+64058361 | Msa0694710:CDS |
| TCACGTCCAGAAATGTTTCG+AGG | 0.507311 | 4_4:+64058415 | Msa0694710:CDS |
| GGTTGGAACATGAAGTCCCC+TGG | 0.508821 | 4_4:+64059444 | Msa0694710:CDS |
| AAGCGTGGAGAGCGCAAAGC+TGG | 0.509458 | 4_4:+64059414 | Msa0694710:CDS |
| ATCTGACATGAGAATAGAAA+CGG | 0.514060 | 4_4:-64059325 | None:intergenic |
| AAGTCACAAGTACAGAAGTA+AGG | 0.515253 | 4_4:+64057701 | Msa0694710:CDS |
| AGTCGGCAACCAAGGCCGAT+TGG | 0.521202 | 4_4:-64058707 | None:intergenic |
| TCAGGAGGTGAAAAGGGAAG+TGG | 0.522015 | 4_4:+64059287 | Msa0694710:CDS |
| CACCTCCTGAAGCTTCTGGG+TGG | 0.522706 | 4_4:-64059274 | None:intergenic |
| CTCCACCTTAACGACGGGAT+TGG | 0.526761 | 4_4:-64056479 | None:intergenic |
| GCAAAGCTGGTTCAGGTGGT+TGG | 0.527885 | 4_4:+64059427 | Msa0694710:CDS |
| CATTGAAAATCTACAATGTA+GGG | 0.528238 | 4_4:+64058362 | Msa0694710:CDS |
| AGTCACCTTGTTCGGAACTC+AGG | 0.528629 | 4_4:-64056754 | None:intergenic |
| AAGATCAAGTGATGCTGAAG+TGG | 0.528838 | 4_4:+64056678 | Msa0694710:CDS |
| TGCTGATGTCACCCTCCAAT+CGG | 0.529019 | 4_4:+64058692 | Msa0694710:CDS |
| TACACGGCATCTGTTGGAGT+TGG | 0.531038 | 4_4:+64058528 | Msa0694710:CDS |
| GTGAAAAGGGAAGTGGAAGA+AGG | 0.534943 | 4_4:+64059294 | Msa0694710:CDS |
| CTTGTTTCGTACGAGGCACC+AGG | 0.535776 | 4_4:-64059803 | None:intergenic |
| GTATTACAGTGTCATTTCCC+GGG | 0.537443 | 4_4:+64059608 | Msa0694710:three_prime_UTR |
| CGGCAACCAAGGCCGATTGG+AGG | 0.540629 | 4_4:-64058704 | None:intergenic |
| GGCAACCAAGGCCGATTGGA+GGG | 0.541238 | 4_4:-64058703 | None:intergenic |
| GTTTGCGTTAATTAAGGAGA+AGG | 0.542510 | 4_4:+64056429 | Msa0694710:five_prime_UTR |
| TGGACGAACAAGGGTGATGT+TGG | 0.545407 | 4_4:+64056574 | Msa0694710:CDS |
| ACAGACAGAAACACTAAACT+AGG | 0.548970 | 4_4:+64055691 | Msa0694710:five_prime_UTR |
| TCAGGAGGTGAAAATGGAAG+TGG | 0.551172 | 4_4:+64059239 | Msa0694710:CDS |
| GTGTCAGTGCATTTGAGCAA+AGG | 0.557356 | 4_4:-64058309 | None:intergenic |
| GGCCAATCCCGTCGTTAAGG+TGG | 0.558790 | 4_4:+64056477 | Msa0694710:CDS |
| GGAAGTTGACAGATCATTGG+AGG | 0.560199 | 4_4:+64057502 | Msa0694710:CDS |
| ATACCATCATCTCACTCCTC+AGG | 0.566479 | 4_4:+64055773 | Msa0694710:five_prime_UTR |
| ACAGACTCCACCTTAACGAC+GGG | 0.568340 | 4_4:-64056484 | None:intergenic |
| GTTGGAACATGAAGTCCCCT+GGG | 0.571232 | 4_4:+64059445 | Msa0694710:CDS |
| CAATTGAAAATGAAGACATA+GGG | 0.580017 | 4_4:-64059683 | None:intergenic |
| TTCACCAGAGTCGGCAACCA+AGG | 0.581301 | 4_4:-64058715 | None:intergenic |
| ACTCACATGTTCACCAGAGT+CGG | 0.590003 | 4_4:-64058724 | None:intergenic |
| GTATGACAAGGTAAAGCATA+CGG | 0.590399 | 4_4:+64057623 | Msa0694710:CDS |
| TATCTCTTGCATGTTACAAG+AGG | 0.590833 | 4_4:-64059748 | None:intergenic |
| GAGCGCAAAGCTGGTTCAGG+TGG | 0.592322 | 4_4:+64059423 | Msa0694710:CDS |
| ATCAGAGTCTGTATCAGCAA+AGG | 0.596262 | 4_4:-64056641 | None:intergenic |
| TTGAATATTCAGTTGCATCA+GGG | 0.596580 | 4_4:-64056615 | None:intergenic |
| AAGTATAGTTCCTCTTCCCC+GGG | 0.600473 | 4_4:-64059625 | None:intergenic |
| TTCTGCTGGGAATGGATACA+CGG | 0.600834 | 4_4:+64058512 | Msa0694710:CDS |
| TTAAATAAGATGTCAACTTG+GGG | 0.601404 | 4_4:-64059564 | None:intergenic |
| GTTCTGAAGGAGCAGCTCAA+AGG | 0.601866 | 4_4:-64058340 | None:intergenic |
| AATAAGAAGTCTGATGCTGA+TGG | 0.604157 | 4_4:+64057939 | Msa0694710:CDS |
| TATTGTGAGTTGGACGAACA+AGG | 0.606643 | 4_4:+64056564 | Msa0694710:CDS |
| TTGGTCCTGAGTTCCGAACA+AGG | 0.611859 | 4_4:+64056749 | Msa0694710:CDS |
| CAGATGTTGATATTGTGAGT+TGG | 0.612336 | 4_4:+64056554 | Msa0694710:CDS |
| ACTGATTATCAGGTTCCCCA+GGG | 0.614893 | 4_4:-64059461 | None:intergenic |
| AGGGTCCGCACACTGAAAAG+TGG | 0.615591 | 4_4:+64058381 | Msa0694710:CDS |
| AAAGTCCTACAAATTCTGCT+GGG | 0.619351 | 4_4:+64058499 | Msa0694710:CDS |
| AGAGAAAGGTTTAAGAGACA+TGG | 0.620727 | 4_4:+64056456 | Msa0694710:exon |
| TGCGTTAATTAAGGAGAAGG+CGG | 0.622535 | 4_4:+64056432 | Msa0694710:five_prime_UTR |
| ATTTCATCCGACCTCTGATG+TGG | 0.624861 | 4_4:+64057526 | Msa0694710:CDS |
| AACAGACTCCACCTTAACGA+CGG | 0.636006 | 4_4:-64056485 | None:intergenic |
| TCAGGACCAAAAGTATCATG+AGG | 0.639160 | 4_4:-64056736 | None:intergenic |
| TATTACAGTGTCATTTCCCG+GGG | 0.646527 | 4_4:+64059609 | Msa0694710:three_prime_UTR |
| TTAGACGCCACATCAGAGGT+CGG | 0.649299 | 4_4:-64057533 | None:intergenic |
| CTTGTGACTTGAAAATGGCA+AGG | 0.651026 | 4_4:-64057688 | None:intergenic |
| AGTCACAACAGATAGTGGAC+TGG | 0.656168 | 4_4:-64059513 | None:intergenic |
| TGTGTGAATAAAAGAAAGCG+TGG | 0.656272 | 4_4:+64059399 | Msa0694710:CDS |
| TGAACAGGTAAACTAAAAGG+GGG | 0.666124 | 4_4:+64056401 | Msa0694710:intron |
| GATGGTATAGCGGCTGATGG+TGG | 0.673515 | 4_4:-64055758 | None:intergenic |
| GATGATGGTATAGCGGCTGA+TGG | 0.675995 | 4_4:-64055761 | None:intergenic |
| AAAGAAAGCTGAGGATACAA+CGG | 0.678218 | 4_4:+64057743 | Msa0694710:CDS |
| CAGGACCAAAAGTATCATGA+GGG | 0.684798 | 4_4:-64056735 | None:intergenic |
| TCCCACCCAGAAGCTTCAGG+AGG | 0.699328 | 4_4:+64059272 | Msa0694710:CDS |
| CTGATTATCAGGTTCCCCAG+GGG | 0.702960 | 4_4:-64059460 | None:intergenic |
| ATTGTGAGTTGGACGAACAA+GGG | 0.703347 | 4_4:+64056565 | Msa0694710:CDS |
| AAGACGACGAAAGAAAGCTG+AGG | 0.709743 | 4_4:+64057734 | Msa0694710:CDS |
| AGAACTTGCAGAGTATGACA+AGG | 0.715284 | 4_4:+64057611 | Msa0694710:CDS |
| GGAGTGAGATGATGGTATAG+CGG | 0.745589 | 4_4:-64055768 | None:intergenic |
| TCTGATGCATGAACTTCAGG+AGG | 0.750934 | 4_4:+64059224 | Msa0694710:CDS |
| TGACAAGGTAAAGCATACGG+CGG | 0.760192 | 4_4:+64057626 | Msa0694710:CDS |
| TTGGAACATGAAGTCCCCTG+GGG | 0.780983 | 4_4:+64059446 | Msa0694710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATATTTTTGATACA+TGG | + | chr4_4:64057455-64057474 | Msa0694710:intron | 10.0% |
| !!! | ACAAAATATATTAATTTTCT+TGG | + | chr4_4:64059060-64059079 | Msa0694710:intron | 10.0% |
| !! | AACAGATTAACAAATTAAAA+GGG | - | chr4_4:64056176-64056195 | None:intergenic | 15.0% |
| !! | AAATGTTTAATATTCAATTC+TGG | + | chr4_4:64056235-64056254 | Msa0694710:intron | 15.0% |
| !! | ATGAAAATTAAACATTTCAT+GGG | - | chr4_4:64056275-64056294 | None:intergenic | 15.0% |
| !! | TATGAAAATTAAACATTTCA+TGG | - | chr4_4:64056276-64056295 | None:intergenic | 15.0% |
| !! | TAATTAAAGATTTGCATATT+TGG | - | chr4_4:64056786-64056805 | None:intergenic | 15.0% |
| !! | GAACAGATTAACAAATTAAA+AGG | - | chr4_4:64056177-64056196 | None:intergenic | 20.0% |
| !! | AAATCTTTAATTATCTTCCT+TGG | + | chr4_4:64056793-64056812 | Msa0694710:intron | 20.0% |
| !! | ATTCAAACCTAATAGTTAAT+AGG | + | chr4_4:64057036-64057055 | Msa0694710:intron | 20.0% |
| !! | AAATATGCCTATTAACTATT+AGG | - | chr4_4:64057046-64057065 | None:intergenic | 20.0% |
| !! | AGAGTTAGAATAAAAACTAT+GGG | - | chr4_4:64057213-64057232 | None:intergenic | 20.0% |
| !! | AAGAGTTAGAATAAAAACTA+TGG | - | chr4_4:64057214-64057233 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTATATGCTCTTT+TGG | + | chr4_4:64058234-64058253 | Msa0694710:intron | 20.0% |
| !! | GAATCGAAATAAATCATATT+TGG | - | chr4_4:64058829-64058848 | None:intergenic | 20.0% |
| !! | CTAACAAATACATATCAATA+TGG | - | chr4_4:64058851-64058870 | None:intergenic | 20.0% |
| !! | CATATTGATATGTATTTGTT+AGG | + | chr4_4:64058849-64058868 | Msa0694710:intron | 20.0% |
| !! | ACTTAAAACAACAACTAAAA+AGG | + | chr4_4:64059096-64059115 | Msa0694710:intron | 20.0% |
| !! | CTTAAAACAACAACTAAAAA+GGG | + | chr4_4:64059097-64059116 | Msa0694710:intron | 20.0% |
| !! | TTTAAATAAGATGTCAACTT+GGG | - | chr4_4:64059568-64059587 | None:intergenic | 20.0% |
| ! | AAGATGATTACATTGAAGAT+AGG | - | chr4_4:64055836-64055855 | None:intergenic | 25.0% |
| !!! | TTGCTTGGTTTTTACATAAT+TGG | + | chr4_4:64055957-64055976 | Msa0694710:intron | 25.0% |
| !!! | TGCTTGGTTTTTACATAATT+GGG | + | chr4_4:64055958-64055977 | Msa0694710:intron | 25.0% |
| ! | AACTGAATTGTGAAATAGAT+TGG | - | chr4_4:64056149-64056168 | None:intergenic | 25.0% |
| !!! | TATGCATTTTGATTTTGAAC+AGG | + | chr4_4:64056386-64056405 | Msa0694710:intron | 25.0% |
| !! | TTTTGAACAGGTAAACTAAA+AGG | + | chr4_4:64056398-64056417 | Msa0694710:intron | 25.0% |
| ! | TTTGAACAGGTAAACTAAAA+GGG | + | chr4_4:64056399-64056418 | Msa0694710:intron | 25.0% |
| !!! | GACTTTTATTTTACTGCATA+TGG | - | chr4_4:64056911-64056930 | None:intergenic | 25.0% |
| !! | CGAATTAATTGACTCTAAAA+AGG | - | chr4_4:64057306-64057325 | None:intergenic | 25.0% |
| !! | TCTAGTTAGATTGTGTTTTA+TGG | + | chr4_4:64057371-64057390 | Msa0694710:intron | 25.0% |
| !!! | AATTTGCTTGAGTCTTATTT+CGG | - | chr4_4:64057565-64057584 | None:intergenic | 25.0% |
| ! | TTATTCTCTACAGTAAGTAA+AGG | - | chr4_4:64057924-64057943 | None:intergenic | 25.0% |
| ! | TCTTTCACTTTATTAACCTT+TGG | + | chr4_4:64058141-64058160 | Msa0694710:intron | 25.0% |
| ! | GATTACTAGGCAAAATTAAA+GGG | - | chr4_4:64058179-64058198 | None:intergenic | 25.0% |
| ! | TGATTACTAGGCAAAATTAA+AGG | - | chr4_4:64058180-64058199 | None:intergenic | 25.0% |
| ! | TACATCAAAATGTGATTACT+AGG | - | chr4_4:64058192-64058211 | None:intergenic | 25.0% |
| ! | AGCATATAAAAAAACTGTCA+TGG | - | chr4_4:64058230-64058249 | None:intergenic | 25.0% |
| ! | ACATTGAAAATCTACAATGT+AGG | + | chr4_4:64058361-64058380 | Msa0694710:CDS | 25.0% |
| ! | CATTGAAAATCTACAATGTA+GGG | + | chr4_4:64058362-64058381 | Msa0694710:CDS | 25.0% |
| !!! | AATTTTAGCCTTATTCTTCA+TGG | + | chr4_4:64058453-64058472 | Msa0694710:CDS | 25.0% |
| !!! | ATGTGAGTTTTCTAAAAGTA+TGG | + | chr4_4:64058739-64058758 | Msa0694710:intron | 25.0% |
| ! | TCGAAATAAATCATATTTGG+TGG | - | chr4_4:64058826-64058845 | None:intergenic | 25.0% |
| ! | TACAAAAGCGACAATTAAAA+AGG | - | chr4_4:64058877-64058896 | None:intergenic | 25.0% |
| ! | TTAAATAAGATGTCAACTTG+GGG | - | chr4_4:64059567-64059586 | None:intergenic | 25.0% |
| ! | GTTTAAATAAGATGTCAACT+TGG | - | chr4_4:64059569-64059588 | None:intergenic | 25.0% |
| ! | CAATTGAAAATGAAGACATA+GGG | - | chr4_4:64059686-64059705 | None:intergenic | 25.0% |
| ! | TCAATTGAAAATGAAGACAT+AGG | - | chr4_4:64059687-64059706 | None:intergenic | 25.0% |
| !! | TTTTCAATTGATCAGTATAC+CGG | + | chr4_4:64059696-64059715 | Msa0694710:three_prime_UTR | 25.0% |
| TAACTTACCTCAATTCACAT+TGG | + | chr4_4:64055855-64055874 | Msa0694710:intron | 30.0% | |
| ! | GTTGTTAGCTAAATTTTGCT+TGG | + | chr4_4:64055942-64055961 | Msa0694710:intron | 30.0% |
| TTGAACAGGTAAACTAAAAG+GGG | + | chr4_4:64056400-64056419 | Msa0694710:intron | 30.0% | |
| TCCTTAATTAACGCAAACTT+TGG | - | chr4_4:64056427-64056446 | None:intergenic | 30.0% | |
| TCTGTTCTTGATGAACAAAT+TGG | + | chr4_4:64056502-64056521 | Msa0694710:CDS | 30.0% | |
| TTGAATATTCAGTTGCATCA+GGG | - | chr4_4:64056618-64056637 | None:intergenic | 30.0% | |
| ! | TCAACATTTTCATAAGACCA+GGG | - | chr4_4:64056855-64056874 | None:intergenic | 30.0% |
| TAACATATTGACCTCTAACT+GGG | - | chr4_4:64056948-64056967 | None:intergenic | 30.0% | |
| TTAACATATTGACCTCTAAC+TGG | - | chr4_4:64056949-64056968 | None:intergenic | 30.0% | |
| TGATGCTTCAGTAAGAAATT+AGG | + | chr4_4:64057117-64057136 | Msa0694710:intron | 30.0% | |
| ATCAAAGCATGCAATATCTA+AGG | - | chr4_4:64057159-64057178 | None:intergenic | 30.0% | |
| TTATGGTGAAGCAAAATTCT+TGG | + | chr4_4:64057388-64057407 | Msa0694710:intron | 30.0% | |
| TGGATTTCCTGTATTAATGT+AGG | + | chr4_4:64057475-64057494 | Msa0694710:intron | 30.0% | |
| ! | CATTTTACCTTAAAAGAGTC+TGG | + | chr4_4:64057657-64057676 | Msa0694710:CDS | 30.0% |
| !!! | CACTATCTTTTTTCCTATCT+CGG | + | chr4_4:64057789-64057808 | Msa0694710:CDS | 30.0% |
| TTCACATACTTCTCTGAATT+GGG | - | chr4_4:64057893-64057912 | None:intergenic | 30.0% | |
| ATTCACATACTTCTCTGAAT+TGG | - | chr4_4:64057894-64057913 | None:intergenic | 30.0% | |
| TCTTTCATTGAGAGAAAATG+AGG | + | chr4_4:64058060-64058079 | Msa0694710:intron | 30.0% | |
| ! | TTTTCTGTTGAATCAACATG+TGG | - | chr4_4:64058276-64058295 | None:intergenic | 30.0% |
| ! | GTAGATTTTCAATGTTCTGA+AGG | - | chr4_4:64058356-64058375 | None:intergenic | 30.0% |
| TCGTTGCAATAAATAGTGAA+GGG | - | chr4_4:64058972-64058991 | None:intergenic | 30.0% | |
| CTATTTATTGCAACGAGAAA+AGG | + | chr4_4:64058976-64058995 | Msa0694710:intron | 30.0% | |
| ATCTGACATGAGAATAGAAA+CGG | - | chr4_4:64059328-64059347 | None:intergenic | 30.0% | |
| !! | AGTCTTATTCACTGATTATC+AGG | - | chr4_4:64059474-64059493 | None:intergenic | 30.0% |
| TCAGTACTAAGCTAAAAAAC+CGG | - | chr4_4:64059718-64059737 | None:intergenic | 30.0% | |
| !! | AGATATTCTGAAAGCTTTTC+TGG | + | chr4_4:64059766-64059785 | Msa0694710:three_prime_UTR | 30.0% |
| ! | GACATCTTCCTCTTTTTAAT+TGG | + | chr4_4:64059832-64059851 | Msa0694710:three_prime_UTR | 30.0% |
| CACTTCATCCAATTAAAAAG+AGG | - | chr4_4:64059843-64059862 | None:intergenic | 30.0% | |
| ACAGACAGAAACACTAAACT+AGG | + | chr4_4:64055691-64055710 | Msa0694710:five_prime_UTR | 35.0% | |
| !! | AATCTGTTCTGCTTTTGCAA+TGG | + | chr4_4:64056188-64056207 | Msa0694710:intron | 35.0% |
| TGAACAGGTAAACTAAAAGG+GGG | + | chr4_4:64056401-64056420 | Msa0694710:intron | 35.0% | |
| GCCAAAGTTTGCGTTAATTA+AGG | + | chr4_4:64056423-64056442 | Msa0694710:five_prime_UTR | 35.0% | |
| GTTTGCGTTAATTAAGGAGA+AGG | + | chr4_4:64056429-64056448 | Msa0694710:five_prime_UTR | 35.0% | |
| AGAGAAAGGTTTAAGAGACA+TGG | + | chr4_4:64056456-64056475 | Msa0694710:exon | 35.0% | |
| CAGATGTTGATATTGTGAGT+TGG | + | chr4_4:64056554-64056573 | Msa0694710:CDS | 35.0% | |
| CTTGAATATTCAGTTGCATC+AGG | - | chr4_4:64056619-64056638 | None:intergenic | 35.0% | |
| GGAATTAAAGTCACCTTGTT+CGG | - | chr4_4:64056765-64056784 | None:intergenic | 35.0% | |
| !! | GTCCTTTTTCATATACTGGT+CGG | - | chr4_4:64056833-64056852 | None:intergenic | 35.0% |
| ! | CTCAACATTTTCATAAGACC+AGG | - | chr4_4:64056856-64056875 | None:intergenic | 35.0% |
| AACATATTGACCTCTAACTG+GGG | - | chr4_4:64056947-64056966 | None:intergenic | 35.0% | |
| AGCTAGTTGAAAAGTGAGTA+AGG | + | chr4_4:64056982-64057001 | Msa0694710:intron | 35.0% | |
| TTTCACATGTCATATACAGC+TGG | - | chr4_4:64057089-64057108 | None:intergenic | 35.0% | |
| ATCAATTGACGATTAGCACA+AGG | - | chr4_4:64057334-64057353 | None:intergenic | 35.0% | |
| TTGTGCTAATCGTCAATTGA+TGG | + | chr4_4:64057333-64057352 | Msa0694710:intron | 35.0% | |
| CACAATCTAACTAGATACAG+TGG | - | chr4_4:64057366-64057385 | None:intergenic | 35.0% | |
| TCCTGTATTAATGTAGGAAG+AGG | + | chr4_4:64057481-64057500 | Msa0694710:intron | 35.0% | |
| TCCTCTTCCTACATTAATAC+AGG | - | chr4_4:64057485-64057504 | None:intergenic | 35.0% | |
| GTATGACAAGGTAAAGCATA+CGG | + | chr4_4:64057623-64057642 | Msa0694710:CDS | 35.0% | |
| ! | TTTCGAACCAGACTCTTTTA+AGG | - | chr4_4:64057667-64057686 | None:intergenic | 35.0% |
| CTGTACTTGTGACTTGAAAA+TGG | - | chr4_4:64057696-64057715 | None:intergenic | 35.0% | |
| AAGTCACAAGTACAGAAGTA+AGG | + | chr4_4:64057701-64057720 | Msa0694710:CDS | 35.0% | |
| AAAGAAAGCTGAGGATACAA+CGG | + | chr4_4:64057743-64057762 | Msa0694710:CDS | 35.0% | |
| AAAAAAGCTCATACCGAGAT+AGG | - | chr4_4:64057805-64057824 | None:intergenic | 35.0% | |
| TCACATACTTCTCTGAATTG+GGG | - | chr4_4:64057892-64057911 | None:intergenic | 35.0% | |
| AATAAGAAGTCTGATGCTGA+TGG | + | chr4_4:64057939-64057958 | Msa0694710:CDS | 35.0% | |
| !! | GGATGATGATTTTGACAATC+CGG | + | chr4_4:64057968-64057987 | Msa0694710:CDS | 35.0% |
| !! | GATGATGATTTTGACAATCC+GGG | + | chr4_4:64057969-64057988 | Msa0694710:CDS | 35.0% |
| !! | ATTTTAACAGCACTAGTGAG+TGG | - | chr4_4:64058029-64058048 | None:intergenic | 35.0% |
| TTCATTGAGAGAAAATGAGG+AGG | + | chr4_4:64058063-64058082 | Msa0694710:intron | 35.0% | |
| ATTCAACTGCATTACGTTTC+TGG | + | chr4_4:64058100-64058119 | Msa0694710:intron | 35.0% | |
| AGAAAACCTCGAAACATTTC+TGG | - | chr4_4:64058424-64058443 | None:intergenic | 35.0% | |
| ! | TGTTTCGAGGTTTTCTTCAT+CGG | + | chr4_4:64058428-64058447 | Msa0694710:CDS | 35.0% |
| AAAGTCCTACAAATTCTGCT+GGG | + | chr4_4:64058499-64058518 | Msa0694710:CDS | 35.0% | |
| CTCAATTATATCAGGAATGC+TGG | - | chr4_4:64058649-64058668 | None:intergenic | 35.0% | |
| ACAGTGCTCTCAATTATATC+AGG | - | chr4_4:64058657-64058676 | None:intergenic | 35.0% | |
| !! | GATATAATTGAGAGCACTGT+TGG | + | chr4_4:64058657-64058676 | Msa0694710:CDS | 35.0% |
| CTCGTTGCAATAAATAGTGA+AGG | - | chr4_4:64058973-64058992 | None:intergenic | 35.0% | |
| AAGACAAAACTTCTTACGAC+TGG | + | chr4_4:64059135-64059154 | Msa0694710:intron | 35.0% | |
| ! | ACGCTTTCTTTTATTCACAC+AGG | - | chr4_4:64059400-64059419 | None:intergenic | 35.0% |
| TGTGTGAATAAAAGAAAGCG+TGG | + | chr4_4:64059399-64059418 | Msa0694710:CDS | 35.0% | |
| !! | AGTATTACAGTGTCATTTCC+CGG | + | chr4_4:64059607-64059626 | Msa0694710:three_prime_UTR | 35.0% |
| TATCTCTTGCATGTTACAAG+AGG | - | chr4_4:64059751-64059770 | None:intergenic | 35.0% | |
| ! | CAAAAAACTTGTTTCGTACG+AGG | - | chr4_4:64059813-64059832 | None:intergenic | 35.0% |
| CAGCATTCCAATGTGAATTG+AGG | - | chr4_4:64055865-64055884 | None:intergenic | 40.0% | |
| TGCGTTAATTAAGGAGAAGG+CGG | + | chr4_4:64056432-64056451 | Msa0694710:five_prime_UTR | 40.0% | |
| ! | TATTGTGAGTTGGACGAACA+AGG | + | chr4_4:64056564-64056583 | Msa0694710:CDS | 40.0% |
| ! | ATTGTGAGTTGGACGAACAA+GGG | + | chr4_4:64056565-64056584 | Msa0694710:CDS | 40.0% |
| TGTTGGATCTACCAAAAACG+AGG | + | chr4_4:64056591-64056610 | Msa0694710:CDS | 40.0% | |
| ATCAGAGTCTGTATCAGCAA+AGG | - | chr4_4:64056644-64056663 | None:intergenic | 40.0% | |
| AAGATCAAGTGATGCTGAAG+TGG | + | chr4_4:64056678-64056697 | Msa0694710:CDS | 40.0% | |
| ! | GAAGTGGATTCAGAGTTCTT+TGG | + | chr4_4:64056694-64056713 | Msa0694710:CDS | 40.0% |
| !! | CAGGACCAAAAGTATCATGA+GGG | - | chr4_4:64056738-64056757 | None:intergenic | 40.0% |
| !! | TCAGGACCAAAAGTATCATG+AGG | - | chr4_4:64056739-64056758 | None:intergenic | 40.0% |
| GACCGACCAGTATATGAAAA+AGG | + | chr4_4:64056828-64056847 | Msa0694710:intron | 40.0% | |
| !! | CAGGGTCCTTTTTCATATAC+TGG | - | chr4_4:64056837-64056856 | None:intergenic | 40.0% |
| CAGTATATGAAAAAGGACCC+TGG | + | chr4_4:64056835-64056854 | Msa0694710:intron | 40.0% | |
| TAACTGGGGACTCTTATCTA+AGG | - | chr4_4:64056933-64056952 | None:intergenic | 40.0% | |
| AACTATGGGTGATGAACAGT+TGG | - | chr4_4:64057199-64057218 | None:intergenic | 40.0% | |
| ATGAATGAACACGCAAAGAG+CGG | - | chr4_4:64057274-64057293 | None:intergenic | 40.0% | |
| TGCTAATCGTCAATTGATGG+CGG | + | chr4_4:64057336-64057355 | Msa0694710:intron | 40.0% | |
| AGAGGAAGTTGACAGATCAT+TGG | + | chr4_4:64057499-64057518 | Msa0694710:CDS | 40.0% | |
| AGAACTTGCAGAGTATGACA+AGG | + | chr4_4:64057611-64057630 | Msa0694710:CDS | 40.0% | |
| CTTGTGACTTGAAAATGGCA+AGG | - | chr4_4:64057691-64057710 | None:intergenic | 40.0% | |
| !! | GCAAGCAGTTGGTAACAATA+AGG | - | chr4_4:64057869-64057888 | None:intergenic | 40.0% |
| CACATACTTCTCTGAATTGG+GGG | - | chr4_4:64057891-64057910 | None:intergenic | 40.0% | |
| GTTAGTATCCTTGCTGCTAA+TGG | + | chr4_4:64057991-64058010 | Msa0694710:intron | 40.0% | |
| TTAGCATACCATTAGCAGCA+AGG | - | chr4_4:64058002-64058021 | None:intergenic | 40.0% | |
| GCACATCACCATGAAGAATA+AGG | - | chr4_4:64058464-64058483 | None:intergenic | 40.0% | |
| CAAAGTCCTACAAATTCTGC+TGG | + | chr4_4:64058498-64058517 | Msa0694710:CDS | 40.0% | |
| ACAAAACTTCTTACGACTGG+TGG | + | chr4_4:64059138-64059157 | Msa0694710:intron | 40.0% | |
| !! | TGACATTGATGATGCACAGA+TGG | + | chr4_4:64059191-64059210 | Msa0694710:intron | 40.0% |
| TGTTCTGATGCATGAACTTC+AGG | + | chr4_4:64059221-64059240 | Msa0694710:CDS | 40.0% | |
| TGAACTTCAGGAGGTGAAAA+TGG | + | chr4_4:64059233-64059252 | Msa0694710:CDS | 40.0% | |
| GTTACAGTCACAACAGATAG+TGG | - | chr4_4:64059521-64059540 | None:intergenic | 40.0% | |
| !! | GTATTACAGTGTCATTTCCC+GGG | + | chr4_4:64059608-64059627 | Msa0694710:three_prime_UTR | 40.0% |
| !! | TATTACAGTGTCATTTCCCG+GGG | + | chr4_4:64059609-64059628 | Msa0694710:three_prime_UTR | 40.0% |
| AAAGTATAGTTCCTCTTCCC+CGG | - | chr4_4:64059629-64059648 | None:intergenic | 40.0% | |
| ! | GGAGTGAGATGATGGTATAG+CGG | - | chr4_4:64055771-64055790 | None:intergenic | 45.0% |
| ATACCATCATCTCACTCCTC+AGG | + | chr4_4:64055773-64055792 | Msa0694710:five_prime_UTR | 45.0% | |
| !! | ATTGGAAGAGAGAGTACCTG+AGG | - | chr4_4:64055792-64055811 | None:intergenic | 45.0% |
| ATGAACGTGCGAGCATGTAT+TGG | - | chr4_4:64055810-64055829 | None:intergenic | 45.0% | |
| AACAGACTCCACCTTAACGA+CGG | - | chr4_4:64056488-64056507 | None:intergenic | 45.0% | |
| ! | GCAAGCCCTCATGATACTTT+TGG | + | chr4_4:64056730-64056749 | Msa0694710:CDS | 45.0% |
| AGATAAGAGTCCCCAGTTAG+AGG | + | chr4_4:64056934-64056953 | Msa0694710:intron | 45.0% | |
| GGAAGTTGACAGATCATTGG+AGG | + | chr4_4:64057502-64057521 | Msa0694710:CDS | 45.0% | |
| ATTTCATCCGACCTCTGATG+TGG | + | chr4_4:64057526-64057545 | Msa0694710:CDS | 45.0% | |
| ! | CATTTTAGACGCCACATCAG+AGG | - | chr4_4:64057540-64057559 | None:intergenic | 45.0% |
| CTCTGATGTGGCGTCTAAAA+TGG | + | chr4_4:64057538-64057557 | Msa0694710:CDS | 45.0% | |
| TGACAAGGTAAAGCATACGG+CGG | + | chr4_4:64057626-64057645 | Msa0694710:CDS | 45.0% | |
| AAGACGACGAAAGAAAGCTG+AGG | + | chr4_4:64057734-64057753 | Msa0694710:CDS | 45.0% | |
| TAGCAGCAAGGATACTAACC+CGG | - | chr4_4:64057990-64058009 | None:intergenic | 45.0% | |
| GTGTCAGTGCATTTGAGCAA+AGG | - | chr4_4:64058312-64058331 | None:intergenic | 45.0% | |
| !!! | TGATGCCACTTTTCAGTGTG+CGG | - | chr4_4:64058389-64058408 | None:intergenic | 45.0% |
| TCACGTCCAGAAATGTTTCG+AGG | + | chr4_4:64058415-64058434 | Msa0694710:CDS | 45.0% | |
| CCATTCCCAGCAGAATTTGT+AGG | - | chr4_4:64058507-64058526 | None:intergenic | 45.0% | |
| CCTACAAATTCTGCTGGGAA+TGG | + | chr4_4:64058504-64058523 | Msa0694710:CDS | 45.0% | |
| TTCTGCTGGGAATGGATACA+CGG | + | chr4_4:64058512-64058531 | Msa0694710:CDS | 45.0% | |
| AATGGATACACGGCATCTGT+TGG | + | chr4_4:64058522-64058541 | Msa0694710:CDS | 45.0% | |
| AAGCTTGAAACACAGCTGTC+AGG | - | chr4_4:64058615-64058634 | None:intergenic | 45.0% | |
| GACAGCTGTGTTTCAAGCTT+TGG | + | chr4_4:64058615-64058634 | Msa0694710:CDS | 45.0% | |
| !! | TGAGAGCACTGTTGGTTTGT+TGG | + | chr4_4:64058665-64058684 | Msa0694710:CDS | 45.0% |
| ACTCACATGTTCACCAGAGT+CGG | - | chr4_4:64058727-64058746 | None:intergenic | 45.0% | |
| AAACTTCTTACGACTGGTGG+TGG | + | chr4_4:64059141-64059160 | Msa0694710:intron | 45.0% | |
| TCTGATGCATGAACTTCAGG+AGG | + | chr4_4:64059224-64059243 | Msa0694710:CDS | 45.0% | |
| TCAGGAGGTGAAAATGGAAG+TGG | + | chr4_4:64059239-64059258 | Msa0694710:CDS | 45.0% | |
| TTTCACCTCCTGAAGCTTCT+GGG | - | chr4_4:64059280-64059299 | None:intergenic | 45.0% | |
| ! | TTTTCACCTCCTGAAGCTTC+TGG | - | chr4_4:64059281-64059300 | None:intergenic | 45.0% |
| AGAAGCTTCAGGAGGTGAAA+AGG | + | chr4_4:64059280-64059299 | Msa0694710:CDS | 45.0% | |
| GAAGCTTCAGGAGGTGAAAA+GGG | + | chr4_4:64059281-64059300 | Msa0694710:CDS | 45.0% | |
| GTGAAAAGGGAAGTGGAAGA+AGG | + | chr4_4:64059294-64059313 | Msa0694710:CDS | 45.0% | |
| ACTGATTATCAGGTTCCCCA+GGG | - | chr4_4:64059464-64059483 | None:intergenic | 45.0% | |
| !! | AGTCACAACAGATAGTGGAC+TGG | - | chr4_4:64059516-64059535 | None:intergenic | 45.0% |
| AAGTATAGTTCCTCTTCCCC+GGG | - | chr4_4:64059628-64059647 | None:intergenic | 45.0% | |
| CTGGTTAATATTCGTGCTCC+TGG | + | chr4_4:64059785-64059804 | Msa0694710:three_prime_UTR | 45.0% | |
| ! | GATGATGGTATAGCGGCTGA+TGG | - | chr4_4:64055764-64055783 | None:intergenic | 50.0% |
| GTACCTGAGGAGTGAGATGA+TGG | - | chr4_4:64055779-64055798 | None:intergenic | 50.0% | |
| AAGGAGAAGGCGGAAGAGAA+AGG | + | chr4_4:64056442-64056461 | Msa0694710:five_prime_UTR | 50.0% | |
| ACAGACTCCACCTTAACGAC+GGG | - | chr4_4:64056487-64056506 | None:intergenic | 50.0% | |
| TGGACGAACAAGGGTGATGT+TGG | + | chr4_4:64056574-64056593 | Msa0694710:CDS | 50.0% | |
| ! | TGCATCAGGGTCCTCGTTTT+TGG | - | chr4_4:64056605-64056624 | None:intergenic | 50.0% |
| TTGGTCCTGAGTTCCGAACA+AGG | + | chr4_4:64056749-64056768 | Msa0694710:CDS | 50.0% | |
| AGTCACCTTGTTCGGAACTC+AGG | - | chr4_4:64056757-64056776 | None:intergenic | 50.0% | |
| CGGTCGCTAACAAATGTCCA+AGG | - | chr4_4:64056813-64056832 | None:intergenic | 50.0% | |
| ATGGGTGATGAACAGTTGGC+TGG | - | chr4_4:64057195-64057214 | None:intergenic | 50.0% | |
| TTAGACGCCACATCAGAGGT+CGG | - | chr4_4:64057536-64057555 | None:intergenic | 50.0% | |
| GTCTGATGCTGATGGCTCTT+TGG | + | chr4_4:64057947-64057966 | Msa0694710:CDS | 50.0% | |
| AGGGAGATCACTACTGCCAA+AGG | - | chr4_4:64058160-64058179 | None:intergenic | 50.0% | |
| !! | GTTCTGAAGGAGCAGCTCAA+AGG | - | chr4_4:64058343-64058362 | None:intergenic | 50.0% |
| TACACGGCATCTGTTGGAGT+TGG | + | chr4_4:64058528-64058547 | Msa0694710:CDS | 50.0% | |
| TGCTGATGTCACCCTCCAAT+CGG | + | chr4_4:64058692-64058711 | Msa0694710:CDS | 50.0% | |
| TCAGGAGGTGAAAAGGGAAG+TGG | + | chr4_4:64059287-64059306 | Msa0694710:CDS | 50.0% | |
| GTTGGAACATGAAGTCCCCT+GGG | + | chr4_4:64059445-64059464 | Msa0694710:CDS | 50.0% | |
| TTGGAACATGAAGTCCCCTG+GGG | + | chr4_4:64059446-64059465 | Msa0694710:CDS | 50.0% | |
| CTGATTATCAGGTTCCCCAG+GGG | - | chr4_4:64059463-64059482 | None:intergenic | 50.0% | |
| ! | CACTGATTATCAGGTTCCCC+AGG | - | chr4_4:64059465-64059484 | None:intergenic | 50.0% |
| GATGGTATAGCGGCTGATGG+TGG | - | chr4_4:64055761-64055780 | None:intergenic | 55.0% | |
| CATGGCCAATCCCGTCGTTA+AGG | + | chr4_4:64056474-64056493 | Msa0694710:exon | 55.0% | |
| CTCCACCTTAACGACGGGAT+TGG | - | chr4_4:64056482-64056501 | None:intergenic | 55.0% | |
| CTGAATTGGGGGCAAGCAGT+TGG | - | chr4_4:64057880-64057899 | None:intergenic | 55.0% | |
| AGGGTCCGCACACTGAAAAG+TGG | + | chr4_4:64058381-64058400 | Msa0694710:CDS | 55.0% | |
| ACGGCATCTGTTGGAGTTGG+AGG | + | chr4_4:64058531-64058550 | Msa0694710:CDS | 55.0% | |
| TTCACCAGAGTCGGCAACCA+AGG | - | chr4_4:64058718-64058737 | None:intergenic | 55.0% | |
| CAATCCCACCCAGAAGCTTC+AGG | + | chr4_4:64059269-64059288 | Msa0694710:CDS | 55.0% | |
| ACCTCCTGAAGCTTCTGGGT+GGG | - | chr4_4:64059276-64059295 | None:intergenic | 55.0% | |
| ! | GCAAAGCTGGTTCAGGTGGT+TGG | + | chr4_4:64059427-64059446 | Msa0694710:CDS | 55.0% |
| GGTTGGAACATGAAGTCCCC+TGG | + | chr4_4:64059444-64059463 | Msa0694710:CDS | 55.0% | |
| !! | AGTGTCATTTCCCGGGGAAG+AGG | + | chr4_4:64059615-64059634 | Msa0694710:three_prime_UTR | 55.0% |
| ! | CTTGTTTCGTACGAGGCACC+AGG | - | chr4_4:64059806-64059825 | None:intergenic | 55.0% |
| GGCCAATCCCGTCGTTAAGG+TGG | + | chr4_4:64056477-64056496 | Msa0694710:CDS | 60.0% | |
| TGTCACCCTCCAATCGGCCT+TGG | + | chr4_4:64058698-64058717 | Msa0694710:CDS | 60.0% | |
| GGCAACCAAGGCCGATTGGA+GGG | - | chr4_4:64058706-64058725 | None:intergenic | 60.0% | |
| AGTCGGCAACCAAGGCCGAT+TGG | - | chr4_4:64058710-64058729 | None:intergenic | 60.0% | |
| TCCCACCCAGAAGCTTCAGG+AGG | + | chr4_4:64059272-64059291 | Msa0694710:CDS | 60.0% | |
| CACCTCCTGAAGCTTCTGGG+TGG | - | chr4_4:64059277-64059296 | None:intergenic | 60.0% | |
| ! | AAGCGTGGAGAGCGCAAAGC+TGG | + | chr4_4:64059414-64059433 | Msa0694710:CDS | 60.0% |
| ! | GGAGAGCGCAAAGCTGGTTC+AGG | + | chr4_4:64059420-64059439 | Msa0694710:CDS | 60.0% |
| ! | GAGCGCAAAGCTGGTTCAGG+TGG | + | chr4_4:64059423-64059442 | Msa0694710:CDS | 60.0% |
| CGGCAACCAAGGCCGATTGG+AGG | - | chr4_4:64058707-64058726 | None:intergenic | 65.0% | |
| !! | TCGGCCTTGGTTGCCGACTC+TGG | + | chr4_4:64058711-64058730 | Msa0694710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 64055680 | 64059867 | 64055680 | ID=Msa0694710;Name=Msa0694710 |
| chr4_4 | mRNA | 64055680 | 64059867 | 64055680 | ID=Msa0694710-mRNA-1;Parent=Msa0694710;Name=Msa0694710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=182|1|1|1|0.8|0.66|6|382|472 |
| chr4_4 | exon | 64055680 | 64055794 | 64055680 | ID=Msa0694710-mRNA-1:exon:18221;Parent=Msa0694710-mRNA-1 |
| chr4_4 | exon | 64056408 | 64056770 | 64056408 | ID=Msa0694710-mRNA-1:exon:18222;Parent=Msa0694710-mRNA-1 |
| chr4_4 | exon | 64057497 | 64057810 | 64057497 | ID=Msa0694710-mRNA-1:exon:18223;Parent=Msa0694710-mRNA-1 |
| chr4_4 | exon | 64057937 | 64057990 | 64057937 | ID=Msa0694710-mRNA-1:exon:18224;Parent=Msa0694710-mRNA-1 |
| chr4_4 | exon | 64058262 | 64058740 | 64058262 | ID=Msa0694710-mRNA-1:exon:18225;Parent=Msa0694710-mRNA-1 |
| chr4_4 | exon | 64059210 | 64059867 | 64059210 | ID=Msa0694710-mRNA-1:exon:18226;Parent=Msa0694710-mRNA-1 |
| chr4_4 | five_prime_UTR | 64055680 | 64055794 | 64055680 | ID=Msa0694710-mRNA-1:five_prime_utr;Parent=Msa0694710-mRNA-1 |
| chr4_4 | five_prime_UTR | 64056408 | 64056474 | 64056408 | ID=Msa0694710-mRNA-1:five_prime_utr;Parent=Msa0694710-mRNA-1 |
| chr4_4 | CDS | 64056475 | 64056770 | 64056475 | ID=Msa0694710-mRNA-1:cds;Parent=Msa0694710-mRNA-1 |
| chr4_4 | CDS | 64057497 | 64057810 | 64057497 | ID=Msa0694710-mRNA-1:cds;Parent=Msa0694710-mRNA-1 |
| chr4_4 | CDS | 64057937 | 64057990 | 64057937 | ID=Msa0694710-mRNA-1:cds;Parent=Msa0694710-mRNA-1 |
| chr4_4 | CDS | 64058262 | 64058740 | 64058262 | ID=Msa0694710-mRNA-1:cds;Parent=Msa0694710-mRNA-1 |
| chr4_4 | CDS | 64059210 | 64059485 | 64059210 | ID=Msa0694710-mRNA-1:cds;Parent=Msa0694710-mRNA-1 |
| chr4_4 | three_prime_UTR | 64059486 | 64059867 | 64059486 | ID=Msa0694710-mRNA-1:three_prime_utr;Parent=Msa0694710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
