Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134580 | XP_013469779.1 | 98.544 | 206 | 3 | 0 | 3 | 208 | 56 | 261 | 5.45e-149 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134580 | sp|Q8GTE3|RS3A_CICAR | 89.806 | 206 | 21 | 0 | 3 | 208 | 56 | 261 | 2.48e-137 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134580 | B7FLW8 | 98.544 | 206 | 3 | 0 | 3 | 208 | 56 | 261 | 2.60e-149 | 424 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0134580 | 0.859272 | 4.638779e-63 | -8.615850e-47 |
| Msa0003330 | Msa0134580 | 0.833390 | 5.481331e-56 | -8.615850e-47 |
| Msa0003360 | Msa0134580 | 0.802209 | 6.254758e-49 | -8.615850e-47 |
| Msa0021290 | Msa0134580 | 0.852271 | 5.151360e-61 | -8.615850e-47 |
| Msa0021320 | Msa0134580 | 0.848563 | 5.660069e-60 | -8.615850e-47 |
| Msa0027590 | Msa0134580 | 0.868402 | 6.707039e-66 | -8.615850e-47 |
| Msa0032780 | Msa0134580 | 0.815943 | 7.134566e-52 | -8.615850e-47 |
| Msa0037480 | Msa0134580 | 0.813021 | 3.160149e-51 | -8.615850e-47 |
| Msa0040220 | Msa0134580 | 0.932695 | 5.789414e-95 | -8.615850e-47 |
| Msa0072570 | Msa0134580 | 0.817108 | 3.912474e-52 | -8.615850e-47 |
| Msa0075350 | Msa0134580 | 0.852786 | 3.673320e-61 | -8.615850e-47 |
| Msa0086160 | Msa0134580 | 0.812267 | 4.621092e-51 | -8.615850e-47 |
| Msa0087910 | Msa0134580 | 0.947419 | 6.980091e-106 | -8.615850e-47 |
| Msa0089540 | Msa0134580 | 0.814685 | 1.358581e-51 | -8.615850e-47 |
| Msa0094210 | Msa0134580 | 0.816619 | 5.036412e-52 | -8.615850e-47 |
| Msa0114570 | Msa0134580 | 0.813753 | 2.182295e-51 | -8.615850e-47 |
| Msa0114600 | Msa0134580 | 0.883014 | 6.418303e-71 | -8.615850e-47 |
| Msa0123290 | Msa0134580 | 0.819132 | 1.363662e-52 | -8.615850e-47 |
| Msa0128330 | Msa0134580 | 0.882844 | 7.406502e-71 | -8.615850e-47 |
| Msa0128750 | Msa0134580 | 0.805263 | 1.452651e-49 | -8.615850e-47 |
| Msa0132460 | Msa0134580 | 0.918285 | 1.881175e-86 | -8.615850e-47 |
| Msa0134580 | Msa0167860 | 0.879301 | 1.393179e-69 | -8.615850e-47 |
| Msa0134580 | Msa0173250 | 0.817124 | 3.879460e-52 | -8.615850e-47 |
| Msa0134580 | Msa0174580 | 0.880525 | 5.107807e-70 | -8.615850e-47 |
| Msa0134580 | Msa0182050 | 0.919732 | 3.114165e-87 | -8.615850e-47 |
| Msa0134580 | Msa0182100 | 0.878252 | 3.263703e-69 | -8.615850e-47 |
| Msa0134580 | Msa0183840 | 0.802814 | 4.691715e-49 | -8.615850e-47 |
| Msa0134580 | Msa0187810 | 0.819233 | 1.293509e-52 | -8.615850e-47 |
| Msa0134580 | Msa0188740 | 0.844962 | 5.461551e-59 | -8.615850e-47 |
| Msa0134580 | Msa0191450 | 0.879636 | 1.059801e-69 | -8.615850e-47 |
| Msa0134580 | Msa0191550 | 0.892991 | 9.516472e-75 | -8.615850e-47 |
| Msa0134580 | Msa0192050 | 0.825676 | 4.116567e-54 | -8.615850e-47 |
| Msa0134580 | Msa0192300 | 0.862130 | 6.302074e-64 | -8.615850e-47 |
| Msa0134580 | Msa0192750 | 0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0134580 | Msa0194940 | 0.903779 | 2.437687e-79 | -8.615850e-47 |
| Msa0134580 | Msa0195030 | 0.801372 | 9.287312e-49 | -8.615850e-47 |
| Msa0134580 | Msa0210330 | 0.804160 | 2.468545e-49 | -8.615850e-47 |
| Msa0134580 | Msa0210360 | 0.801105 | 1.053248e-48 | -8.615850e-47 |
| Msa0134580 | Msa0222730 | 0.847870 | 8.794117e-60 | -8.615850e-47 |
| Msa0134580 | Msa0228540 | 0.836172 | 1.093216e-56 | -8.615850e-47 |
| Msa0134580 | Msa0234850 | 0.804288 | 2.321399e-49 | -8.615850e-47 |
| Msa0134580 | Msa0234900 | 0.800963 | 1.126215e-48 | -8.615850e-47 |
| Msa0134580 | Msa0235050 | 0.850623 | 1.506159e-60 | -8.615850e-47 |
| Msa0134580 | Msa0237180 | 0.808398 | 3.159217e-50 | -8.615850e-47 |
| Msa0134580 | Msa0239420 | 0.805932 | 1.051532e-49 | -8.615850e-47 |
| Msa0134580 | Msa0243750 | 0.800527 | 1.382130e-48 | -8.615850e-47 |
| Msa0134580 | Msa0264640 | 0.829046 | 6.406656e-55 | -8.615850e-47 |
| Msa0134580 | Msa0270160 | 0.843466 | 1.377377e-58 | -8.615850e-47 |
| Msa0134580 | Msa0277600 | 0.921419 | 3.667074e-88 | -8.615850e-47 |
| Msa0134580 | Msa0281330 | 0.832191 | 1.088082e-55 | -8.615850e-47 |
| Msa0134580 | Msa0281370 | 0.837465 | 5.117029e-57 | -8.615850e-47 |
| Msa0134580 | Msa0282290 | 0.801676 | 8.047732e-49 | -8.615850e-47 |
| Msa0134580 | Msa0297830 | 0.803526 | 3.342630e-49 | -8.615850e-47 |
| Msa0134580 | Msa0301220 | 0.855302 | 6.909906e-62 | -8.615850e-47 |
| Msa0134580 | Msa0301250 | 0.862797 | 3.928055e-64 | -8.615850e-47 |
| Msa0134580 | Msa0312210 | 0.828444 | 8.958480e-55 | -8.615850e-47 |
| Msa0134580 | Msa0313060 | 0.884504 | 1.812421e-71 | -8.615850e-47 |
| Msa0134580 | Msa0315430 | 0.889906 | 1.591856e-73 | -8.615850e-47 |
| Msa0134580 | Msa0315660 | 0.809740 | 1.629504e-50 | -8.615850e-47 |
| Msa0134580 | Msa0335840 | 0.817118 | 3.892125e-52 | -8.615850e-47 |
| Msa0134580 | Msa0340560 | 0.868310 | 7.179462e-66 | -8.615850e-47 |
| Msa0134580 | Msa0356640 | 0.806879 | 6.639398e-50 | -8.615850e-47 |
| Msa0134580 | Msa0369410 | 0.860938 | 1.456368e-63 | -8.615850e-47 |
| Msa0134580 | Msa0371490 | 0.868597 | 5.801002e-66 | -8.615850e-47 |
| Msa0134580 | Msa0377370 | 0.801023 | 1.094630e-48 | -8.615850e-47 |
| Msa0134580 | Msa0377520 | 0.841742 | 3.951842e-58 | -8.615850e-47 |
| Msa0134580 | Msa0382950 | 0.822808 | 1.942723e-53 | -8.615850e-47 |
| Msa0134580 | Msa0382960 | 0.817434 | 3.304161e-52 | -8.615850e-47 |
| Msa0134580 | Msa0385030 | 0.803519 | 3.353317e-49 | -8.615850e-47 |
| Msa0134580 | Msa0388250 | 0.803785 | 2.952928e-49 | -8.615850e-47 |
| Msa0134580 | Msa0416210 | 0.801422 | 9.071720e-49 | -8.615850e-47 |
| Msa0134580 | Msa0419710 | 0.834140 | 3.560981e-56 | -8.615850e-47 |
| Msa0134580 | Msa0426090 | 0.902528 | 8.840722e-79 | -8.615850e-47 |
| Msa0134580 | Msa0426250 | 0.917232 | 6.818770e-86 | -8.615850e-47 |
| Msa0134580 | Msa0430130 | 0.807938 | 3.958279e-50 | -8.615850e-47 |
| Msa0134580 | Msa0432750 | 0.846421 | 2.195883e-59 | -8.615850e-47 |
| Msa0134580 | Msa0433630 | 0.803442 | 3.478948e-49 | -8.615850e-47 |
| Msa0134580 | Msa0450150 | 0.854403 | 1.259894e-61 | -8.615850e-47 |
| Msa0134580 | Msa0463520 | 0.823179 | 1.592531e-53 | -8.615850e-47 |
| Msa0134580 | Msa0469430 | 0.801672 | 8.062109e-49 | -8.615850e-47 |
| Msa0134580 | Msa0472480 | 0.896023 | 5.488835e-76 | -8.615850e-47 |
| Msa0134580 | Msa0475810 | 0.922701 | 6.982048e-89 | -8.615850e-47 |
| Msa0134580 | Msa0479980 | 0.843557 | 1.302643e-58 | -8.615850e-47 |
| Msa0134580 | Msa0481520 | 0.901046 | 3.980524e-78 | -8.615850e-47 |
| Msa0134580 | Msa0482260 | 0.818218 | 2.198922e-52 | -8.615850e-47 |
| Msa0134580 | Msa0482560 | 0.801408 | 9.134128e-49 | -8.615850e-47 |
| Msa0134580 | Msa0495620 | 0.806369 | 8.507646e-50 | -8.615850e-47 |
| Msa0134580 | Msa0511760 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0134580 | Msa0517480 | 0.856428 | 3.238518e-62 | -8.615850e-47 |
| Msa0134580 | Msa0521510 | 0.805581 | 1.245783e-49 | -8.615850e-47 |
| Msa0134580 | Msa0529900 | 0.907301 | 5.872356e-81 | -8.615850e-47 |
| Msa0134580 | Msa0540480 | 0.829584 | 4.743310e-55 | -8.615850e-47 |
| Msa0134580 | Msa0547920 | 0.902528 | 8.840722e-79 | -8.615850e-47 |
| Msa0134580 | Msa0573550 | 0.918184 | 2.129480e-86 | -8.615850e-47 |
| Msa0134580 | Msa0574780 | 0.809055 | 2.285962e-50 | -8.615850e-47 |
| Msa0134580 | Msa0578010 | 0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0134580 | Msa0579830 | 0.838410 | 2.923199e-57 | -8.615850e-47 |
| Msa0134580 | Msa0582070 | 0.861433 | 1.029327e-63 | -8.615850e-47 |
| Msa0134580 | Msa0585570 | 0.818121 | 2.312859e-52 | -8.615850e-47 |
| Msa0134580 | Msa0591050 | 0.809796 | 1.585399e-50 | -8.615850e-47 |
| Msa0134580 | Msa0597240 | 0.862601 | 4.515642e-64 | -8.615850e-47 |
| Msa0134580 | Msa0602900 | 0.887342 | 1.552958e-72 | -8.615850e-47 |
| Msa0134580 | Msa0605890 | 0.876985 | 9.029603e-69 | -8.615850e-47 |
| Msa0134580 | Msa0612040 | 0.812268 | 4.618747e-51 | -8.615850e-47 |
| Msa0134580 | Msa0619230 | 0.878721 | 2.233739e-69 | -8.615850e-47 |
| Msa0134580 | Msa0622230 | 0.882069 | 1.418145e-70 | -8.615850e-47 |
| Msa0134580 | Msa0629280 | 0.832588 | 8.678932e-56 | -8.615850e-47 |
| Msa0134580 | Msa0643960 | 0.892337 | 1.742808e-74 | -8.615850e-47 |
| Msa0134580 | Msa0649890 | 0.830108 | 3.535528e-55 | -8.615850e-47 |
| Msa0134580 | Msa0652160 | 0.803020 | 4.255396e-49 | -8.615850e-47 |
| Msa0134580 | Msa0653060 | 0.893873 | 4.188253e-75 | -8.615850e-47 |
| Msa0134580 | Msa0663400 | 0.830953 | 2.196198e-55 | -8.615850e-47 |
| Msa0134580 | Msa0681220 | 0.821174 | 4.645369e-53 | -8.615850e-47 |
| Msa0134580 | Msa0686550 | 0.803755 | 2.995912e-49 | -8.615850e-47 |
| Msa0134580 | Msa0694400 | 0.889440 | 2.418200e-73 | -8.615850e-47 |
| Msa0134580 | Msa0694710 | 0.816330 | 5.847052e-52 | -8.615850e-47 |
| Msa0134580 | Msa0704860 | 0.869209 | 3.674711e-66 | -8.615850e-47 |
| Msa0134580 | Msa0705800 | 0.804677 | 1.925795e-49 | -8.615850e-47 |
| Msa0134580 | Msa0708630 | 0.918485 | 1.469627e-86 | -8.615850e-47 |
| Msa0134580 | Msa0718560 | 0.809065 | 2.274633e-50 | -8.615850e-47 |
| Msa0134580 | Msa0741510 | 0.845641 | 3.578008e-59 | -8.615850e-47 |
| Msa0134580 | Msa0748350 | 0.896674 | 2.940084e-76 | -8.615850e-47 |
| Msa0134580 | Msa0749000 | 0.804491 | 2.106182e-49 | -8.615850e-47 |
| Msa0134580 | Msa0758420 | 0.803583 | 3.253381e-49 | -8.615850e-47 |
| Msa0134580 | Msa0767280 | 0.808318 | 3.284739e-50 | -8.615850e-47 |
| Msa0134580 | Msa0788380 | 0.824080 | 9.795196e-54 | -8.615850e-47 |
| Msa0134580 | Msa0790450 | 0.872320 | 3.481730e-67 | -8.615850e-47 |
| Msa0134580 | Msa0796490 | 0.821492 | 3.923004e-53 | -8.615850e-47 |
| Msa0134580 | Msa0799830 | 0.808029 | 3.786258e-50 | -8.615850e-47 |
| Msa0134580 | Msa0802000 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
| Msa0134580 | Msa0822580 | 0.802929 | 4.442803e-49 | -8.615850e-47 |
| Msa0134580 | Msa0838070 | 0.822899 | 1.850500e-53 | -8.615850e-47 |
| Msa0134580 | Msa0846900 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0134580 | Msa0861320 | 0.843239 | 1.583267e-58 | -8.615850e-47 |
| Msa0134580 | Msa0902220 | 0.801020 | 1.096578e-48 | -8.615850e-47 |
| Msa0134580 | Msa0927910 | 0.810437 | 1.153445e-50 | -8.615850e-47 |
| Msa0134580 | Msa0929680 | 0.830618 | 2.652881e-55 | -8.615850e-47 |
| Msa0134580 | Msa0929700 | 0.918802 | 9.939917e-87 | -8.615850e-47 |
| Msa0134580 | Msa0930100 | 0.835030 | 2.127029e-56 | -8.615850e-47 |
| Msa0134580 | Msa0930790 | 0.832774 | 7.800731e-56 | -8.615850e-47 |
| Msa0134580 | Msa0930890 | 0.812725 | 3.668969e-51 | -8.615850e-47 |
| Msa0134580 | Msa0966120 | 0.800940 | 1.138255e-48 | -8.615850e-47 |
| Msa0134580 | Msa1001620 | 0.806672 | 7.343002e-50 | -8.615850e-47 |
| Msa0134580 | Msa1004780 | 0.809565 | 1.776954e-50 | -8.615850e-47 |
| Msa0134580 | Msa1025200 | 0.876590 | 1.237228e-68 | -8.615850e-47 |
| Msa0134580 | Msa1025220 | 0.866246 | 3.280774e-65 | -8.615850e-47 |
| Msa0134580 | Msa1037290 | 0.845860 | 3.120026e-59 | -8.615850e-47 |
| Msa0134580 | Msa1040160 | 0.865086 | 7.621243e-65 | -8.615850e-47 |
| Msa0134580 | Msa1041680 | 0.811527 | 6.695046e-51 | -8.615850e-47 |
| Msa0134580 | Msa1047020 | 0.846194 | 2.531557e-59 | -8.615850e-47 |
| Msa0134580 | Msa1050100 | 0.892324 | 1.763629e-74 | -8.615850e-47 |
| Msa0134580 | Msa1054280 | 0.843278 | 1.545758e-58 | -8.615850e-47 |
| Msa0134580 | Msa1078870 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
| Msa0134580 | Msa1078980 | 0.826167 | 3.146861e-54 | -8.615850e-47 |
| Msa0134580 | Msa1079910 | 0.803238 | 3.835660e-49 | -8.615850e-47 |
| Msa0134580 | Msa1079920 | 0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0134580 | Msa1082170 | 0.829486 | 5.011447e-55 | -8.615850e-47 |
| Msa0134580 | Msa1083370 | 0.881933 | 1.588755e-70 | -8.615850e-47 |
| Msa0134580 | Msa1085850 | 0.816122 | 6.507795e-52 | -8.615850e-47 |
| Msa0134580 | Msa1109310 | 0.857751 | 1.318706e-62 | -8.615850e-47 |
| Msa0134580 | Msa1116940 | 0.811177 | 7.974500e-51 | -8.615850e-47 |
| Msa0134580 | Msa1124850 | 0.855756 | 5.096531e-62 | -8.615850e-47 |
| Msa0134580 | Msa1126520 | 0.810623 | 1.051312e-50 | -8.615850e-47 |
| Msa0134580 | Msa1126690 | 0.871441 | 6.818784e-67 | -8.615850e-47 |
| Msa0134580 | Msa1144610 | 0.802015 | 6.856476e-49 | -8.615850e-47 |
| Msa0134580 | Msa1156830 | 0.804357 | 2.245540e-49 | -8.615850e-47 |
| Msa0134580 | Msa1163320 | 0.808389 | 3.172926e-50 | -8.615850e-47 |
| Msa0134580 | Msa1164150 | 0.862676 | 4.280014e-64 | -8.615850e-47 |
| Msa0134580 | Msa1165640 | 0.883058 | 6.184155e-71 | -8.615850e-47 |
| Msa0134580 | Msa1166570 | 0.815579 | 8.600167e-52 | -8.615850e-47 |
| Msa0134580 | Msa1166670 | 0.848785 | 4.913385e-60 | -8.615850e-47 |
| Msa0134580 | Msa1167540 | 0.833289 | 5.807649e-56 | -8.615850e-47 |
| Msa0134580 | Msa1169180 | 0.824535 | 7.658324e-54 | -8.615850e-47 |
| Msa0134580 | Msa1180000 | 0.826451 | 2.694066e-54 | -8.615850e-47 |
| Msa0134580 | Msa1186030 | 0.854419 | 1.246236e-61 | -8.615850e-47 |
| Msa0134580 | Msa1203560 | 0.870630 | 1.262170e-66 | -8.615850e-47 |
| Msa0134580 | Msa1206240 | 0.801568 | 8.470083e-49 | -8.615850e-47 |
| Msa0134580 | Msa1208330 | 0.819241 | 1.287543e-52 | -8.615850e-47 |
| Msa0134580 | Msa1218610 | 0.819058 | 1.417795e-52 | -8.615850e-47 |
| Msa0134580 | Msa1219760 | 0.830260 | 3.245264e-55 | -8.615850e-47 |
| Msa0134580 | Msa1220580 | 0.824284 | 8.771800e-54 | -8.615850e-47 |
| Msa0134580 | Msa1227080 | 0.835065 | 2.083928e-56 | -8.615850e-47 |
| Msa0134580 | Msa1235950 | 0.835092 | 2.052170e-56 | -8.615850e-47 |
| Msa0134580 | Msa1235980 | 0.842569 | 2.386761e-58 | -8.615850e-47 |
| Msa0134580 | Msa1237040 | 0.862515 | 4.799438e-64 | -8.615850e-47 |
| Msa0134580 | Msa1240270 | 0.842342 | 2.741145e-58 | -8.615850e-47 |
| Msa0134580 | Msa1255830 | 0.867263 | 1.556850e-65 | -8.615850e-47 |
| Msa0134580 | Msa1255850 | 0.887096 | 1.925754e-72 | -8.615850e-47 |
| Msa0134580 | Msa1258460 | 0.851096 | 1.108819e-60 | -8.615850e-47 |
| Msa0134580 | Msa1258540 | 0.853574 | 2.183668e-61 | -8.615850e-47 |
| Msa0134580 | Msa1266680 | 0.809583 | 1.761525e-50 | -8.615850e-47 |
| Msa0134580 | Msa1270640 | 0.812905 | 3.350457e-51 | -8.615850e-47 |
| Msa0134580 | Msa1270710 | 0.810263 | 1.257482e-50 | -8.615850e-47 |
| Msa0134580 | Msa1278130 | 0.832478 | 9.237631e-56 | -8.615850e-47 |
| Msa0134580 | Msa1284060 | 0.867103 | 1.750718e-65 | -8.615850e-47 |
| Msa0134580 | Msa1295150 | 0.834336 | 3.179093e-56 | -8.615850e-47 |
| Msa0134580 | Msa1295170 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
| Msa0134580 | Msa1296090 | 0.868860 | 4.767930e-66 | -8.615850e-47 |
| Msa0134580 | Msa1311400 | 0.853958 | 1.692996e-61 | -8.615850e-47 |
| Msa0134580 | Msa1317390 | 0.854578 | 1.121212e-61 | -8.615850e-47 |
| Msa0134580 | Msa1330730 | 0.835592 | 1.534289e-56 | -8.615850e-47 |
| Msa0134580 | Msa1333370 | 0.834055 | 3.738601e-56 | -8.615850e-47 |
| Msa0134580 | Msa1334560 | 0.819798 | 9.611012e-53 | -8.615850e-47 |
| Msa0134580 | Msa1341780 | 0.870213 | 1.729355e-66 | -8.615850e-47 |
| Msa0134580 | Msa1351020 | 0.881185 | 2.960222e-70 | -8.615850e-47 |
| Msa0134580 | Msa1351910 | 0.832675 | 8.257237e-56 | -8.615850e-47 |
| Msa0134580 | Msa1353300 | 0.818893 | 1.545699e-52 | -8.615850e-47 |
| Msa0134580 | Msa1358710 | 0.816165 | 6.365988e-52 | -8.615850e-47 |
| Msa0134580 | Msa1363910 | 0.848921 | 4.504323e-60 | -8.615850e-47 |
| Msa0134580 | Msa1367540 | 0.846646 | 1.905788e-59 | -8.615850e-47 |
| Msa0134580 | Msa1368920 | 0.846883 | 1.641872e-59 | -8.615850e-47 |
| Msa0134580 | Msa1371410 | 0.855616 | 5.598656e-62 | -8.615850e-47 |
| Msa0134580 | Msa1385480 | 0.882561 | 9.398399e-71 | -8.615850e-47 |
| Msa0134580 | Msa1390760 | 0.877053 | 8.552036e-69 | -8.615850e-47 |
| Msa0134580 | Msa1410570 | 0.816826 | 4.526953e-52 | -8.615850e-47 |
| Msa0134580 | Msa1413570 | 0.804268 | 2.343938e-49 | -8.615850e-47 |
| Msa0134580 | Msa1415620 | 0.850446 | 1.689522e-60 | -8.615850e-47 |
| Msa0134580 | Msa1421510 | 0.808358 | 3.220759e-50 | -8.615850e-47 |
| Msa0134580 | Msa1424570 | 0.884372 | 2.029113e-71 | -8.615850e-47 |
| Msa0134580 | Msa1426120 | 0.804385 | 2.215887e-49 | -8.615850e-47 |
| Msa0134580 | Msa1432310 | 0.862387 | 5.255183e-64 | -8.615850e-47 |
| Msa0134580 | Msa1446410 | 0.846800 | 1.730127e-59 | -8.615850e-47 |
| Msa0134580 | Msa1449160 | 0.869845 | 2.281017e-66 | -8.615850e-47 |
| Msa0134580 | Msa1450560 | 0.878019 | 3.938713e-69 | -8.615850e-47 |
| Msa0134580 | Msa1463570 | 0.882333 | 1.137818e-70 | -8.615850e-47 |
| Msa0134580 | Msa1465700 | 0.835078 | 2.068745e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134580 | MtrunA17_Chr1g0204941 | 98.544 | 206 | 3 | 0 | 3 | 208 | 56 | 261 | 5.01e-153 | 424 |
| Msa0134580 | MtrunA17_Chr3g0081171 | 95.631 | 206 | 9 | 0 | 3 | 208 | 56 | 261 | 7.37e-147 | 409 |
| Msa0134580 | MtrunA17_Chr5g0394611 | 92.718 | 206 | 15 | 0 | 3 | 208 | 56 | 261 | 7.04e-142 | 396 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134580 | AT3G04840.1 | 85.507 | 207 | 29 | 1 | 3 | 208 | 56 | 262 | 6.89e-133 | 374 |
| Msa0134580 | AT4G34670.1 | 85.507 | 207 | 29 | 1 | 3 | 208 | 56 | 262 | 4.20e-132 | 372 |
Find 76 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAAACTTGGGAGCTTTA+AGG | 0.168578 | 1_3:-66126747 | None:intergenic |
| ATTGGATTGGGCATGGGAGC+TGG | 0.247452 | 1_3:+66127495 | Msa0134580:three_prime_UTR |
| ATCAGATATGCATGCTATAT+TGG | 0.286319 | 1_3:+66127477 | Msa0134580:three_prime_UTR |
| ATTTGGTCCTTGTAGGTTCA+TGG | 0.319619 | 1_3:+66127187 | Msa0134580:intron |
| GTTTCTCACCCCAAGTCTTT+TGG | 0.335249 | 1_3:+66127581 | Msa0134580:three_prime_UTR |
| AAAGCTCCCAAGTTTGATCT+TGG | 0.357514 | 1_3:+66126751 | Msa0134580:CDS |
| GTTTGATCTTGGAAAATTGA+TGG | 0.369245 | 1_3:+66126762 | Msa0134580:CDS |
| GAAATTGTTGGAGCTTGATT+TGG | 0.369823 | 1_3:+66127280 | Msa0134580:exon |
| AAATTCATTCCCGAGATGAT+TGG | 0.381702 | 1_3:+66126655 | Msa0134580:CDS |
| GAGCTGGGTGATTATTGATT+TGG | 0.385457 | 1_3:+66127511 | Msa0134580:three_prime_UTR |
| AAGTATACATTTAACCTCAT+TGG | 0.408595 | 1_3:+66127625 | Msa0134580:three_prime_UTR |
| GACTAATAAACATAAGTAAC+AGG | 0.412325 | 1_3:-66127332 | None:intergenic |
| TAGAGTGTTTGAGGTTTCAT+TGG | 0.413434 | 1_3:+66125967 | Msa0134580:CDS |
| AATTCATTCCCGAGATGATT+GGG | 0.425172 | 1_3:+66126656 | Msa0134580:CDS |
| GGGACGAAGAACATGCGTTC+AGG | 0.425585 | 1_3:+66126002 | Msa0134580:CDS |
| GTTTCATTGGCTGATCTTCA+AGG | 0.434675 | 1_3:+66125980 | Msa0134580:CDS |
| AGCATCATCTTGTGATTTGA+AGG | 0.436321 | 1_3:+66126621 | Msa0134580:CDS |
| CAAAATAAAACCGCTGCACT+TGG | 0.439170 | 1_3:-66127393 | None:intergenic |
| TCCGTCGCCATTTCATCAGC+AGG | 0.447536 | 1_3:-66127247 | None:intergenic |
| ACTCAAGCATAGAGTGTTTG+AGG | 0.454600 | 1_3:+66125958 | Msa0134580:CDS |
| TACCAAGAGGAGAGCTAACC+AGG | 0.455144 | 1_3:+66126300 | Msa0134580:CDS |
| TTGGATTGGGCATGGGAGCT+GGG | 0.457638 | 1_3:+66127496 | Msa0134580:three_prime_UTR |
| GGATGAACACGTTCTGCAAT+GGG | 0.459558 | 1_3:-66126711 | None:intergenic |
| ATCTTGTGATTTGAAGGGAT+TGG | 0.459981 | 1_3:+66126627 | Msa0134580:CDS |
| AACATGCGTTCAGGAAGATT+AGG | 0.468997 | 1_3:+66126011 | Msa0134580:CDS |
| TATGCATGCTATATTGGATT+GGG | 0.472378 | 1_3:+66127483 | Msa0134580:three_prime_UTR |
| ATCTCTTTCCCAATCATCTC+GGG | 0.472425 | 1_3:-66126664 | None:intergenic |
| CGGATGAACACGTTCTGCAA+TGG | 0.478333 | 1_3:-66126712 | None:intergenic |
| CTGACTAGATTGTGCATAGC+AGG | 0.478379 | 1_3:-66126332 | None:intergenic |
| AGAGAGGCCTGCTGATGAAA+TGG | 0.479682 | 1_3:+66127240 | Msa0134580:CDS |
| GAGGAACCTACTGAAATTGT+TGG | 0.484047 | 1_3:+66127268 | Msa0134580:CDS |
| ATATGCATGCTATATTGGAT+TGG | 0.488879 | 1_3:+66127482 | Msa0134580:three_prime_UTR |
| TGGTCAGATCCGTAGGAAGA+TGG | 0.499805 | 1_3:+66126579 | Msa0134580:intron |
| CACCTGGTTAGCTCTCCTCT+TGG | 0.502596 | 1_3:-66126302 | None:intergenic |
| AACTGACAAACTGAGGTCAT+TGG | 0.506332 | 1_3:+66126192 | Msa0134580:CDS |
| TGAGGTCATTGGTGCGTAAG+TGG | 0.507827 | 1_3:+66126203 | Msa0134580:CDS |
| TCAAATCACAAGATGATGCT+TGG | 0.512552 | 1_3:-66126618 | None:intergenic |
| TCATCTCGGGAATGAATTTG+AGG | 0.518795 | 1_3:-66126651 | None:intergenic |
| CATAGCAGGTCCTCTTCACC+TGG | 0.518854 | 1_3:-66126318 | None:intergenic |
| TTTCATTGGCTGATCTTCAA+GGG | 0.523908 | 1_3:+66125981 | Msa0134580:CDS |
| TGCTATATTGGATTGGGCAT+GGG | 0.525910 | 1_3:+66127489 | Msa0134580:three_prime_UTR |
| TATACATTTAACCTCATTGG+AGG | 0.528971 | 1_3:+66127628 | Msa0134580:three_prime_UTR |
| CTTTATTTGGTCAGATCCGT+AGG | 0.534876 | 1_3:+66126572 | Msa0134580:intron |
| TTGAGAGCTGAAGATGTTCA+AGG | 0.537527 | 1_3:+66126034 | Msa0134580:CDS |
| ATGGGCACAACCAAAAGACT+TGG | 0.538736 | 1_3:-66127591 | None:intergenic |
| GCATCATCTTGTGATTTGAA+GGG | 0.543515 | 1_3:+66126622 | Msa0134580:CDS |
| GATCTCTTTCCCAATCATCT+CGG | 0.545949 | 1_3:-66126665 | None:intergenic |
| TGCTGATGAAATGGCGACGG+AGG | 0.555297 | 1_3:+66127249 | Msa0134580:CDS |
| GGAGAGCTAACCAGGTGAAG+AGG | 0.557404 | 1_3:+66126308 | Msa0134580:CDS |
| TGGGCACAACCAAAAGACTT+GGG | 0.557728 | 1_3:-66127590 | None:intergenic |
| GAATGACAGATTGCTTCAGA+TGG | 0.560187 | 1_3:+66125935 | Msa0134580:intron |
| CTCTGAGGATGTTGGCACAA+AGG | 0.562498 | 1_3:+66127216 | Msa0134580:CDS |
| GAAAATTCCTTCCTCCAATG+AGG | 0.569781 | 1_3:-66127639 | None:intergenic |
| CATTTAACCTCATTGGAGGA+AGG | 0.575102 | 1_3:+66127632 | Msa0134580:three_prime_UTR |
| ACAATCTAGTCAGATTAGAC+AGG | 0.580594 | 1_3:+66126342 | Msa0134580:CDS |
| CAAGCTCCAACAATTTCAGT+AGG | 0.582102 | 1_3:-66127274 | None:intergenic |
| GGAGATTACTCTGAGGATGT+TGG | 0.587473 | 1_3:+66127208 | Msa0134580:CDS |
| GGGTGATTATTGATTTGGTG+TGG | 0.590317 | 1_3:+66127516 | Msa0134580:three_prime_UTR |
| TGATCTCAACCATCTTCCTA+CGG | 0.590794 | 1_3:-66126588 | None:intergenic |
| ATGCTATATTGGATTGGGCA+TGG | 0.591758 | 1_3:+66127488 | Msa0134580:three_prime_UTR |
| GCCTGCTGATGAAATGGCGA+CGG | 0.592955 | 1_3:+66127246 | Msa0134580:CDS |
| TTCATTGGCTGATCTTCAAG+GGG | 0.595752 | 1_3:+66125982 | Msa0134580:CDS |
| CAGTAGTCTTGACATCCACA+TGG | 0.596992 | 1_3:-66126243 | None:intergenic |
| AACTCTTATTGAAGCCCATG+TGG | 0.605950 | 1_3:+66126228 | Msa0134580:CDS |
| TGATCTTGGAAAATTGATGG+AGG | 0.612140 | 1_3:+66126765 | Msa0134580:CDS |
| TGAGAGCTGAAGATGTTCAA+GGG | 0.612312 | 1_3:+66126035 | Msa0134580:CDS |
| CAATGGGTAAATACTAGACG+TGG | 0.627663 | 1_3:-66126695 | None:intergenic |
| CTACTGATAATTACACATTG+AGG | 0.636083 | 1_3:+66126260 | Msa0134580:CDS |
| TTTGCATTGGATTTACCAAG+AGG | 0.649561 | 1_3:+66126287 | Msa0134580:CDS |
| ATGTTGGCACAAAGGTAGAG+AGG | 0.654238 | 1_3:+66127224 | Msa0134580:CDS |
| ACTTGGCTTACATAGAACTC+AGG | 0.670546 | 1_3:-66127376 | None:intergenic |
| TCTATGTAAGCCAAGTGCAG+CGG | 0.672422 | 1_3:+66127383 | Msa0134580:three_prime_UTR |
| GGGCACAACCAAAAGACTTG+GGG | 0.672707 | 1_3:-66127589 | None:intergenic |
| ATTTCACAACTGACAAACTG+AGG | 0.681977 | 1_3:+66126185 | Msa0134580:CDS |
| AGTAGTCTTGACATCCACAT+GGG | 0.706350 | 1_3:-66126242 | None:intergenic |
| GGTTCATGGAGATTACTCTG+AGG | 0.741731 | 1_3:+66127201 | Msa0134580:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATTAAAATTTAAA+AGG | - | chr1_3:66127076-66127095 | None:intergenic | 0.0% |
| !! | AATAAAAATTAAAATTTAAA+AGG | - | chr1_3:66127076-66127095 | None:intergenic | 0.0% |
| !!! | TTTTTATTTTTTATTTACAG+GGG | + | chr1_3:66126158-66126177 | Msa0134580:intron | 10.0% |
| !! | GATATTATGAAAATAAATAT+TGG | - | chr1_3:66126834-66126853 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTTTATTTACAG+GGG | + | chr1_3:66126158-66126177 | Msa0134580:intron | 10.0% |
| !! | GATATTATGAAAATAAATAT+TGG | - | chr1_3:66126834-66126853 | None:intergenic | 10.0% |
| !!! | AAAATCTTTTGACAAATTTT+TGG | + | chr1_3:66126059-66126078 | Msa0134580:CDS | 15.0% |
| !!! | AAATCTTTTGACAAATTTTT+GGG | + | chr1_3:66126060-66126079 | Msa0134580:CDS | 15.0% |
| !!! | AAATATATCTGAATTTTGTT+TGG | + | chr1_3:66127444-66127463 | Msa0134580:three_prime_UTR | 15.0% |
| !!! | AAAATCTTTTGACAAATTTT+TGG | + | chr1_3:66126059-66126078 | Msa0134580:CDS | 15.0% |
| !!! | AAATCTTTTGACAAATTTTT+GGG | + | chr1_3:66126060-66126079 | Msa0134580:CDS | 15.0% |
| !!! | AAATATATCTGAATTTTGTT+TGG | + | chr1_3:66127444-66127463 | Msa0134580:three_prime_UTR | 15.0% |
| !!! | AATAGCTTTTAATAATCTGA+AGG | - | chr1_3:66126984-66127003 | None:intergenic | 20.0% |
| !!! | AATAGCTTTTAATAATCTGA+AGG | - | chr1_3:66126984-66127003 | None:intergenic | 20.0% |
| !!! | AAATTTTTGGGTATGATATG+CGG | + | chr1_3:66126072-66126091 | Msa0134580:intron | 25.0% |
| ! | ACAACATTATGACAAATAGA+TGG | - | chr1_3:66126100-66126119 | None:intergenic | 25.0% |
| !! | TTTGTCATAATGTTGTTTGT+TGG | + | chr1_3:66126104-66126123 | Msa0134580:intron | 25.0% |
| !!! | AATCACTTGTTTTGAACTTA+TGG | + | chr1_3:66126498-66126517 | Msa0134580:intron | 25.0% |
| ! | ACTAATGTAACACCTTTATT+TGG | + | chr1_3:66126559-66126578 | Msa0134580:intron | 25.0% |
| !! | AATTTTCCAAGATCAAACTT+GGG | - | chr1_3:66126760-66126779 | None:intergenic | 25.0% |
| !! | AAAAACTTTGGTTGTTACTT+TGG | + | chr1_3:66126864-66126883 | Msa0134580:intron | 25.0% |
| !! | TTTGGAAAGTTTGAAGTAAT+TGG | - | chr1_3:66126933-66126952 | None:intergenic | 25.0% |
| !!! | TAATAATCTGAAGGTGTTTA+TGG | - | chr1_3:66126975-66126994 | None:intergenic | 25.0% |
| !!! | AATCAATGACACTTTTTAGA+TGG | - | chr1_3:66127154-66127173 | None:intergenic | 25.0% |
| !!! | AAAGTGTCATTGATTTGATT+TGG | + | chr1_3:66127159-66127178 | Msa0134580:intron | 25.0% |
| ! | GACTAATAAACATAAGTAAC+AGG | - | chr1_3:66127335-66127354 | None:intergenic | 25.0% |
| !! | TATACTTTTCAGCAATGAAT+GGG | - | chr1_3:66127612-66127631 | None:intergenic | 25.0% |
| ! | AAGTATACATTTAACCTCAT+TGG | + | chr1_3:66127625-66127644 | Msa0134580:three_prime_UTR | 25.0% |
| !!! | AAATTTTTGGGTATGATATG+CGG | + | chr1_3:66126072-66126091 | Msa0134580:intron | 25.0% |
| ! | ACAACATTATGACAAATAGA+TGG | - | chr1_3:66126100-66126119 | None:intergenic | 25.0% |
| !! | TTTGTCATAATGTTGTTTGT+TGG | + | chr1_3:66126104-66126123 | Msa0134580:intron | 25.0% |
| !!! | AATCACTTGTTTTGAACTTA+TGG | + | chr1_3:66126498-66126517 | Msa0134580:intron | 25.0% |
| ! | ACTAATGTAACACCTTTATT+TGG | + | chr1_3:66126559-66126578 | Msa0134580:intron | 25.0% |
| !! | AATTTTCCAAGATCAAACTT+GGG | - | chr1_3:66126760-66126779 | None:intergenic | 25.0% |
| !! | AAAAACTTTGGTTGTTACTT+TGG | + | chr1_3:66126864-66126883 | Msa0134580:intron | 25.0% |
| !! | TTTGGAAAGTTTGAAGTAAT+TGG | - | chr1_3:66126933-66126952 | None:intergenic | 25.0% |
| !!! | TAATAATCTGAAGGTGTTTA+TGG | - | chr1_3:66126975-66126994 | None:intergenic | 25.0% |
| !!! | AATCAATGACACTTTTTAGA+TGG | - | chr1_3:66127154-66127173 | None:intergenic | 25.0% |
| !!! | AAAGTGTCATTGATTTGATT+TGG | + | chr1_3:66127159-66127178 | Msa0134580:intron | 25.0% |
| ! | GACTAATAAACATAAGTAAC+AGG | - | chr1_3:66127335-66127354 | None:intergenic | 25.0% |
| !! | TATACTTTTCAGCAATGAAT+GGG | - | chr1_3:66127612-66127631 | None:intergenic | 25.0% |
| ! | AAGTATACATTTAACCTCAT+TGG | + | chr1_3:66127625-66127644 | Msa0134580:three_prime_UTR | 25.0% |
| CTACTGATAATTACACATTG+AGG | + | chr1_3:66126260-66126279 | Msa0134580:CDS | 30.0% | |
| CAGATATTAGTGATTCAACA+AGG | + | chr1_3:66126413-66126432 | Msa0134580:intron | 30.0% | |
| ! | AGGTATCCAACACATATTTT+AGG | + | chr1_3:66126433-66126452 | Msa0134580:intron | 30.0% |
| GTTCTACCTAAAATATGTGT+TGG | - | chr1_3:66126442-66126461 | None:intergenic | 30.0% | |
| AGCAGCATTTCATAAAAGAA+AGG | - | chr1_3:66126464-66126483 | None:intergenic | 30.0% | |
| !! | CTTTAAGGATCTTCACTTTT+CGG | - | chr1_3:66126735-66126754 | None:intergenic | 30.0% |
| ! | CAATTTTCCAAGATCAAACT+TGG | - | chr1_3:66126761-66126780 | None:intergenic | 30.0% |
| GTTTGATCTTGGAAAATTGA+TGG | + | chr1_3:66126762-66126781 | Msa0134580:CDS | 30.0% | |
| !! | GATTTGATTTGGTTGCTATT+TGG | + | chr1_3:66127170-66127189 | Msa0134580:intron | 30.0% |
| ATCAGATATGCATGCTATAT+TGG | + | chr1_3:66127477-66127496 | Msa0134580:three_prime_UTR | 30.0% | |
| ATATGCATGCTATATTGGAT+TGG | + | chr1_3:66127482-66127501 | Msa0134580:three_prime_UTR | 30.0% | |
| TATGCATGCTATATTGGATT+GGG | + | chr1_3:66127483-66127502 | Msa0134580:three_prime_UTR | 30.0% | |
| ! | GTATACTTTTCAGCAATGAA+TGG | - | chr1_3:66127613-66127632 | None:intergenic | 30.0% |
| TATACATTTAACCTCATTGG+AGG | + | chr1_3:66127628-66127647 | Msa0134580:three_prime_UTR | 30.0% | |
| CTACTGATAATTACACATTG+AGG | + | chr1_3:66126260-66126279 | Msa0134580:CDS | 30.0% | |
| CAGATATTAGTGATTCAACA+AGG | + | chr1_3:66126413-66126432 | Msa0134580:intron | 30.0% | |
| ! | AGGTATCCAACACATATTTT+AGG | + | chr1_3:66126433-66126452 | Msa0134580:intron | 30.0% |
| GTTCTACCTAAAATATGTGT+TGG | - | chr1_3:66126442-66126461 | None:intergenic | 30.0% | |
| AGCAGCATTTCATAAAAGAA+AGG | - | chr1_3:66126464-66126483 | None:intergenic | 30.0% | |
| !! | CTTTAAGGATCTTCACTTTT+CGG | - | chr1_3:66126735-66126754 | None:intergenic | 30.0% |
| ! | CAATTTTCCAAGATCAAACT+TGG | - | chr1_3:66126761-66126780 | None:intergenic | 30.0% |
| GTTTGATCTTGGAAAATTGA+TGG | + | chr1_3:66126762-66126781 | Msa0134580:CDS | 30.0% | |
| !! | GATTTGATTTGGTTGCTATT+TGG | + | chr1_3:66127170-66127189 | Msa0134580:intron | 30.0% |
| ATCAGATATGCATGCTATAT+TGG | + | chr1_3:66127477-66127496 | Msa0134580:three_prime_UTR | 30.0% | |
| ATATGCATGCTATATTGGAT+TGG | + | chr1_3:66127482-66127501 | Msa0134580:three_prime_UTR | 30.0% | |
| TATGCATGCTATATTGGATT+GGG | + | chr1_3:66127483-66127502 | Msa0134580:three_prime_UTR | 30.0% | |
| ! | GTATACTTTTCAGCAATGAA+TGG | - | chr1_3:66127613-66127632 | None:intergenic | 30.0% |
| TATACATTTAACCTCATTGG+AGG | + | chr1_3:66127628-66127647 | Msa0134580:three_prime_UTR | 30.0% | |
| ! | TAGAGTGTTTGAGGTTTCAT+TGG | + | chr1_3:66125967-66125986 | Msa0134580:CDS | 35.0% |
| ! | TTTCATTGGCTGATCTTCAA+GGG | + | chr1_3:66125981-66126000 | Msa0134580:CDS | 35.0% |
| ATTTCACAACTGACAAACTG+AGG | + | chr1_3:66126185-66126204 | Msa0134580:CDS | 35.0% | |
| ! | ACATTGAGGATGTTTTGCAT+TGG | + | chr1_3:66126274-66126293 | Msa0134580:CDS | 35.0% |
| TTTGCATTGGATTTACCAAG+AGG | + | chr1_3:66126287-66126306 | Msa0134580:CDS | 35.0% | |
| ACAATCTAGTCAGATTAGAC+AGG | + | chr1_3:66126342-66126361 | Msa0134580:CDS | 35.0% | |
| TCAAATCACAAGATGATGCT+TGG | - | chr1_3:66126621-66126640 | None:intergenic | 35.0% | |
| AGCATCATCTTGTGATTTGA+AGG | + | chr1_3:66126621-66126640 | Msa0134580:CDS | 35.0% | |
| GCATCATCTTGTGATTTGAA+GGG | + | chr1_3:66126622-66126641 | Msa0134580:CDS | 35.0% | |
| ATCTTGTGATTTGAAGGGAT+TGG | + | chr1_3:66126627-66126646 | Msa0134580:CDS | 35.0% | |
| AAATTCATTCCCGAGATGAT+TGG | + | chr1_3:66126655-66126674 | Msa0134580:CDS | 35.0% | |
| AATTCATTCCCGAGATGATT+GGG | + | chr1_3:66126656-66126675 | Msa0134580:CDS | 35.0% | |
| TGATCTTGGAAAATTGATGG+AGG | + | chr1_3:66126765-66126784 | Msa0134580:CDS | 35.0% | |
| ! | AACAACCAAAGTTTTTGTGC+AGG | - | chr1_3:66126860-66126879 | None:intergenic | 35.0% |
| CTTTCCAAAAGCTCTCTATT+CGG | + | chr1_3:66126944-66126963 | Msa0134580:intron | 35.0% | |
| ! | GTTTTCACACAAGCACTTAT+TGG | - | chr1_3:66127037-66127056 | None:intergenic | 35.0% |
| TCAAGCTAAAAGAGAACAGA+AGG | - | chr1_3:66127100-66127119 | None:intergenic | 35.0% | |
| GAAATTGTTGGAGCTTGATT+TGG | + | chr1_3:66127280-66127299 | Msa0134580:exon | 35.0% | |
| ! | TAGAGTGTTTGAGGTTTCAT+TGG | + | chr1_3:66125967-66125986 | Msa0134580:CDS | 35.0% |
| ! | TTTCATTGGCTGATCTTCAA+GGG | + | chr1_3:66125981-66126000 | Msa0134580:CDS | 35.0% |
| ATTTCACAACTGACAAACTG+AGG | + | chr1_3:66126185-66126204 | Msa0134580:CDS | 35.0% | |
| ! | ACATTGAGGATGTTTTGCAT+TGG | + | chr1_3:66126274-66126293 | Msa0134580:CDS | 35.0% |
| TTTGCATTGGATTTACCAAG+AGG | + | chr1_3:66126287-66126306 | Msa0134580:CDS | 35.0% | |
| ACAATCTAGTCAGATTAGAC+AGG | + | chr1_3:66126342-66126361 | Msa0134580:CDS | 35.0% | |
| TCAAATCACAAGATGATGCT+TGG | - | chr1_3:66126621-66126640 | None:intergenic | 35.0% | |
| AGCATCATCTTGTGATTTGA+AGG | + | chr1_3:66126621-66126640 | Msa0134580:CDS | 35.0% | |
| GCATCATCTTGTGATTTGAA+GGG | + | chr1_3:66126622-66126641 | Msa0134580:CDS | 35.0% | |
| ATCTTGTGATTTGAAGGGAT+TGG | + | chr1_3:66126627-66126646 | Msa0134580:CDS | 35.0% | |
| AAATTCATTCCCGAGATGAT+TGG | + | chr1_3:66126655-66126674 | Msa0134580:CDS | 35.0% | |
| AATTCATTCCCGAGATGATT+GGG | + | chr1_3:66126656-66126675 | Msa0134580:CDS | 35.0% | |
| TGATCTTGGAAAATTGATGG+AGG | + | chr1_3:66126765-66126784 | Msa0134580:CDS | 35.0% | |
| ! | AACAACCAAAGTTTTTGTGC+AGG | - | chr1_3:66126860-66126879 | None:intergenic | 35.0% |
| CTTTCCAAAAGCTCTCTATT+CGG | + | chr1_3:66126944-66126963 | Msa0134580:intron | 35.0% | |
| ! | GTTTTCACACAAGCACTTAT+TGG | - | chr1_3:66127037-66127056 | None:intergenic | 35.0% |
| TCAAGCTAAAAGAGAACAGA+AGG | - | chr1_3:66127100-66127119 | None:intergenic | 35.0% | |
| GAAATTGTTGGAGCTTGATT+TGG | + | chr1_3:66127280-66127299 | Msa0134580:exon | 35.0% | |
| GAATGACAGATTGCTTCAGA+TGG | + | chr1_3:66125935-66125954 | Msa0134580:intron | 40.0% | |
| ! | ACTCAAGCATAGAGTGTTTG+AGG | + | chr1_3:66125958-66125977 | Msa0134580:CDS | 40.0% |
| ! | GTTTCATTGGCTGATCTTCA+AGG | + | chr1_3:66125980-66125999 | Msa0134580:CDS | 40.0% |
| ! | TTCATTGGCTGATCTTCAAG+GGG | + | chr1_3:66125982-66126001 | Msa0134580:CDS | 40.0% |
| AACATGCGTTCAGGAAGATT+AGG | + | chr1_3:66126011-66126030 | Msa0134580:CDS | 40.0% | |
| TTGAGAGCTGAAGATGTTCA+AGG | + | chr1_3:66126034-66126053 | Msa0134580:CDS | 40.0% | |
| TGAGAGCTGAAGATGTTCAA+GGG | + | chr1_3:66126035-66126054 | Msa0134580:CDS | 40.0% | |
| AACTGACAAACTGAGGTCAT+TGG | + | chr1_3:66126192-66126211 | Msa0134580:CDS | 40.0% | |
| AACTCTTATTGAAGCCCATG+TGG | + | chr1_3:66126228-66126247 | Msa0134580:CDS | 40.0% | |
| ! | AGTAGTCTTGACATCCACAT+GGG | - | chr1_3:66126245-66126264 | None:intergenic | 40.0% |
| CTACGGATCTGACCAAATAA+AGG | - | chr1_3:66126574-66126593 | None:intergenic | 40.0% | |
| ! | CTTTATTTGGTCAGATCCGT+AGG | + | chr1_3:66126572-66126591 | Msa0134580:intron | 40.0% |
| TGATCTCAACCATCTTCCTA+CGG | - | chr1_3:66126591-66126610 | None:intergenic | 40.0% | |
| TCATCTCGGGAATGAATTTG+AGG | - | chr1_3:66126654-66126673 | None:intergenic | 40.0% | |
| ATCTCTTTCCCAATCATCTC+GGG | - | chr1_3:66126667-66126686 | None:intergenic | 40.0% | |
| GATCTCTTTCCCAATCATCT+CGG | - | chr1_3:66126668-66126687 | None:intergenic | 40.0% | |
| CAATGGGTAAATACTAGACG+TGG | - | chr1_3:66126698-66126717 | None:intergenic | 40.0% | |
| GATCAAACTTGGGAGCTTTA+AGG | - | chr1_3:66126750-66126769 | None:intergenic | 40.0% | |
| AAAGCTCCCAAGTTTGATCT+TGG | + | chr1_3:66126751-66126770 | Msa0134580:CDS | 40.0% | |
| TCGTTCCTGCACAAAAACTT+TGG | + | chr1_3:66126852-66126871 | Msa0134580:intron | 40.0% | |
| ! | GAAACCGAATAGAGAGCTTT+TGG | - | chr1_3:66126951-66126970 | None:intergenic | 40.0% |
| ATTTGGTCCTTGTAGGTTCA+TGG | + | chr1_3:66127187-66127206 | Msa0134580:intron | 40.0% | |
| GTAATCTCCATGAACCTACA+AGG | - | chr1_3:66127197-66127216 | None:intergenic | 40.0% | |
| GAGGAACCTACTGAAATTGT+TGG | + | chr1_3:66127268-66127287 | Msa0134580:CDS | 40.0% | |
| CAAGCTCCAACAATTTCAGT+AGG | - | chr1_3:66127277-66127296 | None:intergenic | 40.0% | |
| ACTTGGCTTACATAGAACTC+AGG | - | chr1_3:66127379-66127398 | None:intergenic | 40.0% | |
| CAAAATAAAACCGCTGCACT+TGG | - | chr1_3:66127396-66127415 | None:intergenic | 40.0% | |
| ! | ATGCTATATTGGATTGGGCA+TGG | + | chr1_3:66127488-66127507 | Msa0134580:three_prime_UTR | 40.0% |
| ! | TGCTATATTGGATTGGGCAT+GGG | + | chr1_3:66127489-66127508 | Msa0134580:three_prime_UTR | 40.0% |
| ! | GAGCTGGGTGATTATTGATT+TGG | + | chr1_3:66127511-66127530 | Msa0134580:three_prime_UTR | 40.0% |
| !! | GGGTGATTATTGATTTGGTG+TGG | + | chr1_3:66127516-66127535 | Msa0134580:three_prime_UTR | 40.0% |
| CATTTAACCTCATTGGAGGA+AGG | + | chr1_3:66127632-66127651 | Msa0134580:three_prime_UTR | 40.0% | |
| GAAAATTCCTTCCTCCAATG+AGG | - | chr1_3:66127642-66127661 | None:intergenic | 40.0% | |
| GAATGACAGATTGCTTCAGA+TGG | + | chr1_3:66125935-66125954 | Msa0134580:intron | 40.0% | |
| ! | ACTCAAGCATAGAGTGTTTG+AGG | + | chr1_3:66125958-66125977 | Msa0134580:CDS | 40.0% |
| ! | GTTTCATTGGCTGATCTTCA+AGG | + | chr1_3:66125980-66125999 | Msa0134580:CDS | 40.0% |
| ! | TTCATTGGCTGATCTTCAAG+GGG | + | chr1_3:66125982-66126001 | Msa0134580:CDS | 40.0% |
| AACATGCGTTCAGGAAGATT+AGG | + | chr1_3:66126011-66126030 | Msa0134580:CDS | 40.0% | |
| TTGAGAGCTGAAGATGTTCA+AGG | + | chr1_3:66126034-66126053 | Msa0134580:CDS | 40.0% | |
| TGAGAGCTGAAGATGTTCAA+GGG | + | chr1_3:66126035-66126054 | Msa0134580:CDS | 40.0% | |
| AACTGACAAACTGAGGTCAT+TGG | + | chr1_3:66126192-66126211 | Msa0134580:CDS | 40.0% | |
| AACTCTTATTGAAGCCCATG+TGG | + | chr1_3:66126228-66126247 | Msa0134580:CDS | 40.0% | |
| ! | AGTAGTCTTGACATCCACAT+GGG | - | chr1_3:66126245-66126264 | None:intergenic | 40.0% |
| CTACGGATCTGACCAAATAA+AGG | - | chr1_3:66126574-66126593 | None:intergenic | 40.0% | |
| ! | CTTTATTTGGTCAGATCCGT+AGG | + | chr1_3:66126572-66126591 | Msa0134580:intron | 40.0% |
| TGATCTCAACCATCTTCCTA+CGG | - | chr1_3:66126591-66126610 | None:intergenic | 40.0% | |
| TCATCTCGGGAATGAATTTG+AGG | - | chr1_3:66126654-66126673 | None:intergenic | 40.0% | |
| ATCTCTTTCCCAATCATCTC+GGG | - | chr1_3:66126667-66126686 | None:intergenic | 40.0% | |
| GATCTCTTTCCCAATCATCT+CGG | - | chr1_3:66126668-66126687 | None:intergenic | 40.0% | |
| CAATGGGTAAATACTAGACG+TGG | - | chr1_3:66126698-66126717 | None:intergenic | 40.0% | |
| GATCAAACTTGGGAGCTTTA+AGG | - | chr1_3:66126750-66126769 | None:intergenic | 40.0% | |
| AAAGCTCCCAAGTTTGATCT+TGG | + | chr1_3:66126751-66126770 | Msa0134580:CDS | 40.0% | |
| TCGTTCCTGCACAAAAACTT+TGG | + | chr1_3:66126852-66126871 | Msa0134580:intron | 40.0% | |
| ! | GAAACCGAATAGAGAGCTTT+TGG | - | chr1_3:66126951-66126970 | None:intergenic | 40.0% |
| ATTTGGTCCTTGTAGGTTCA+TGG | + | chr1_3:66127187-66127206 | Msa0134580:intron | 40.0% | |
| GTAATCTCCATGAACCTACA+AGG | - | chr1_3:66127197-66127216 | None:intergenic | 40.0% | |
| GAGGAACCTACTGAAATTGT+TGG | + | chr1_3:66127268-66127287 | Msa0134580:CDS | 40.0% | |
| CAAGCTCCAACAATTTCAGT+AGG | - | chr1_3:66127277-66127296 | None:intergenic | 40.0% | |
| ACTTGGCTTACATAGAACTC+AGG | - | chr1_3:66127379-66127398 | None:intergenic | 40.0% | |
| CAAAATAAAACCGCTGCACT+TGG | - | chr1_3:66127396-66127415 | None:intergenic | 40.0% | |
| ! | ATGCTATATTGGATTGGGCA+TGG | + | chr1_3:66127488-66127507 | Msa0134580:three_prime_UTR | 40.0% |
| ! | TGCTATATTGGATTGGGCAT+GGG | + | chr1_3:66127489-66127508 | Msa0134580:three_prime_UTR | 40.0% |
| ! | GAGCTGGGTGATTATTGATT+TGG | + | chr1_3:66127511-66127530 | Msa0134580:three_prime_UTR | 40.0% |
| !! | GGGTGATTATTGATTTGGTG+TGG | + | chr1_3:66127516-66127535 | Msa0134580:three_prime_UTR | 40.0% |
| CATTTAACCTCATTGGAGGA+AGG | + | chr1_3:66127632-66127651 | Msa0134580:three_prime_UTR | 40.0% | |
| GAAAATTCCTTCCTCCAATG+AGG | - | chr1_3:66127642-66127661 | None:intergenic | 40.0% | |
| ! | CAGTAGTCTTGACATCCACA+TGG | - | chr1_3:66126246-66126265 | None:intergenic | 45.0% |
| CTGACTAGATTGTGCATAGC+AGG | - | chr1_3:66126335-66126354 | None:intergenic | 45.0% | |
| GGATGAACACGTTCTGCAAT+GGG | - | chr1_3:66126714-66126733 | None:intergenic | 45.0% | |
| !! | GGTTGCTATTTGGTCCTTGT+AGG | + | chr1_3:66127180-66127199 | Msa0134580:intron | 45.0% |
| GGTTCATGGAGATTACTCTG+AGG | + | chr1_3:66127201-66127220 | Msa0134580:intron | 45.0% | |
| ! | GGAGATTACTCTGAGGATGT+TGG | + | chr1_3:66127208-66127227 | Msa0134580:CDS | 45.0% |
| ATGTTGGCACAAAGGTAGAG+AGG | + | chr1_3:66127224-66127243 | Msa0134580:CDS | 45.0% | |
| TCTATGTAAGCCAAGTGCAG+CGG | + | chr1_3:66127383-66127402 | Msa0134580:three_prime_UTR | 45.0% | |
| ! | GTTTCTCACCCCAAGTCTTT+TGG | + | chr1_3:66127581-66127600 | Msa0134580:three_prime_UTR | 45.0% |
| TGGGCACAACCAAAAGACTT+GGG | - | chr1_3:66127593-66127612 | None:intergenic | 45.0% | |
| ATGGGCACAACCAAAAGACT+TGG | - | chr1_3:66127594-66127613 | None:intergenic | 45.0% | |
| ! | CAGTAGTCTTGACATCCACA+TGG | - | chr1_3:66126246-66126265 | None:intergenic | 45.0% |
| CTGACTAGATTGTGCATAGC+AGG | - | chr1_3:66126335-66126354 | None:intergenic | 45.0% | |
| GGATGAACACGTTCTGCAAT+GGG | - | chr1_3:66126714-66126733 | None:intergenic | 45.0% | |
| !! | GGTTGCTATTTGGTCCTTGT+AGG | + | chr1_3:66127180-66127199 | Msa0134580:intron | 45.0% |
| GGTTCATGGAGATTACTCTG+AGG | + | chr1_3:66127201-66127220 | Msa0134580:intron | 45.0% | |
| ! | GGAGATTACTCTGAGGATGT+TGG | + | chr1_3:66127208-66127227 | Msa0134580:CDS | 45.0% |
| ATGTTGGCACAAAGGTAGAG+AGG | + | chr1_3:66127224-66127243 | Msa0134580:CDS | 45.0% | |
| TCTATGTAAGCCAAGTGCAG+CGG | + | chr1_3:66127383-66127402 | Msa0134580:three_prime_UTR | 45.0% | |
| ! | GTTTCTCACCCCAAGTCTTT+TGG | + | chr1_3:66127581-66127600 | Msa0134580:three_prime_UTR | 45.0% |
| TGGGCACAACCAAAAGACTT+GGG | - | chr1_3:66127593-66127612 | None:intergenic | 45.0% | |
| ATGGGCACAACCAAAAGACT+TGG | - | chr1_3:66127594-66127613 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTTTTTATTTAC+AGG | + | chr1_3:66126156-66126175 | Msa0134580:intron | 5.0% |
| !!! | ATTTTTATTTTTTATTTACA+GGG | + | chr1_3:66126157-66126176 | Msa0134580:intron | 5.0% |
| !! | ATATTATGAAAATAAATATT+GGG | - | chr1_3:66126833-66126852 | None:intergenic | 5.0% |
| !!! | TATTTTTATTTTTTATTTAC+AGG | + | chr1_3:66126156-66126175 | Msa0134580:intron | 5.0% |
| !!! | ATTTTTATTTTTTATTTACA+GGG | + | chr1_3:66126157-66126176 | Msa0134580:intron | 5.0% |
| !! | ATATTATGAAAATAAATATT+GGG | - | chr1_3:66126833-66126852 | None:intergenic | 5.0% |
| TGAGGTCATTGGTGCGTAAG+TGG | + | chr1_3:66126203-66126222 | Msa0134580:CDS | 50.0% | |
| TACCAAGAGGAGAGCTAACC+AGG | + | chr1_3:66126300-66126319 | Msa0134580:CDS | 50.0% | |
| TGGTCAGATCCGTAGGAAGA+TGG | + | chr1_3:66126579-66126598 | Msa0134580:intron | 50.0% | |
| CGGATGAACACGTTCTGCAA+TGG | - | chr1_3:66126715-66126734 | None:intergenic | 50.0% | |
| ! | CTCTGAGGATGTTGGCACAA+AGG | + | chr1_3:66127216-66127235 | Msa0134580:CDS | 50.0% |
| AGAGAGGCCTGCTGATGAAA+TGG | + | chr1_3:66127240-66127259 | Msa0134580:CDS | 50.0% | |
| GGGCACAACCAAAAGACTTG+GGG | - | chr1_3:66127592-66127611 | None:intergenic | 50.0% | |
| TGAGGTCATTGGTGCGTAAG+TGG | + | chr1_3:66126203-66126222 | Msa0134580:CDS | 50.0% | |
| TACCAAGAGGAGAGCTAACC+AGG | + | chr1_3:66126300-66126319 | Msa0134580:CDS | 50.0% | |
| TGGTCAGATCCGTAGGAAGA+TGG | + | chr1_3:66126579-66126598 | Msa0134580:intron | 50.0% | |
| CGGATGAACACGTTCTGCAA+TGG | - | chr1_3:66126715-66126734 | None:intergenic | 50.0% | |
| ! | CTCTGAGGATGTTGGCACAA+AGG | + | chr1_3:66127216-66127235 | Msa0134580:CDS | 50.0% |
| AGAGAGGCCTGCTGATGAAA+TGG | + | chr1_3:66127240-66127259 | Msa0134580:CDS | 50.0% | |
| GGGCACAACCAAAAGACTTG+GGG | - | chr1_3:66127592-66127611 | None:intergenic | 50.0% | |
| GGGACGAAGAACATGCGTTC+AGG | + | chr1_3:66126002-66126021 | Msa0134580:CDS | 55.0% | |
| ! | CACCTGGTTAGCTCTCCTCT+TGG | - | chr1_3:66126305-66126324 | None:intergenic | 55.0% |
| GGAGAGCTAACCAGGTGAAG+AGG | + | chr1_3:66126308-66126327 | Msa0134580:CDS | 55.0% | |
| CATAGCAGGTCCTCTTCACC+TGG | - | chr1_3:66126321-66126340 | None:intergenic | 55.0% | |
| GCCTGCTGATGAAATGGCGA+CGG | + | chr1_3:66127246-66127265 | Msa0134580:CDS | 55.0% | |
| TCCGTCGCCATTTCATCAGC+AGG | - | chr1_3:66127250-66127269 | None:intergenic | 55.0% | |
| TGCTGATGAAATGGCGACGG+AGG | + | chr1_3:66127249-66127268 | Msa0134580:CDS | 55.0% | |
| ! | ATTGGATTGGGCATGGGAGC+TGG | + | chr1_3:66127495-66127514 | Msa0134580:three_prime_UTR | 55.0% |
| ! | TTGGATTGGGCATGGGAGCT+GGG | + | chr1_3:66127496-66127515 | Msa0134580:three_prime_UTR | 55.0% |
| GGGACGAAGAACATGCGTTC+AGG | + | chr1_3:66126002-66126021 | Msa0134580:CDS | 55.0% | |
| ! | CACCTGGTTAGCTCTCCTCT+TGG | - | chr1_3:66126305-66126324 | None:intergenic | 55.0% |
| GGAGAGCTAACCAGGTGAAG+AGG | + | chr1_3:66126308-66126327 | Msa0134580:CDS | 55.0% | |
| CATAGCAGGTCCTCTTCACC+TGG | - | chr1_3:66126321-66126340 | None:intergenic | 55.0% | |
| GCCTGCTGATGAAATGGCGA+CGG | + | chr1_3:66127246-66127265 | Msa0134580:CDS | 55.0% | |
| TCCGTCGCCATTTCATCAGC+AGG | - | chr1_3:66127250-66127269 | None:intergenic | 55.0% | |
| TGCTGATGAAATGGCGACGG+AGG | + | chr1_3:66127249-66127268 | Msa0134580:CDS | 55.0% | |
| ! | ATTGGATTGGGCATGGGAGC+TGG | + | chr1_3:66127495-66127514 | Msa0134580:three_prime_UTR | 55.0% |
| ! | TTGGATTGGGCATGGGAGCT+GGG | + | chr1_3:66127496-66127515 | Msa0134580:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 66125924 | 66127661 | 66125924 | ID=Msa0134580;Name=Msa0134580 |
| chr1_3 | mRNA | 66125924 | 66127661 | 66125924 | ID=Msa0134580-mRNA-1;Parent=Msa0134580;Name=Msa0134580-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.75|0.6|0.8|1|1|5|364|208 |
| chr1_3 | exon | 66125924 | 66125929 | 66125924 | ID=Msa0134580-mRNA-1:exon:22527;Parent=Msa0134580-mRNA-1 |
| chr1_3 | exon | 66125944 | 66126081 | 66125944 | ID=Msa0134580-mRNA-1:exon:22528;Parent=Msa0134580-mRNA-1 |
| chr1_3 | exon | 66126178 | 66126363 | 66126178 | ID=Msa0134580-mRNA-1:exon:22529;Parent=Msa0134580-mRNA-1 |
| chr1_3 | exon | 66126586 | 66126786 | 66126586 | ID=Msa0134580-mRNA-1:exon:22530;Parent=Msa0134580-mRNA-1 |
| chr1_3 | exon | 66127202 | 66127661 | 66127202 | ID=Msa0134580-mRNA-1:exon:22531;Parent=Msa0134580-mRNA-1 |
| chr1_3 | CDS | 66125924 | 66125929 | 66125924 | ID=Msa0134580-mRNA-1:cds;Parent=Msa0134580-mRNA-1 |
| chr1_3 | CDS | 66125944 | 66126081 | 66125944 | ID=Msa0134580-mRNA-1:cds;Parent=Msa0134580-mRNA-1 |
| chr1_3 | CDS | 66126178 | 66126363 | 66126178 | ID=Msa0134580-mRNA-1:cds;Parent=Msa0134580-mRNA-1 |
| chr1_3 | CDS | 66126586 | 66126786 | 66126586 | ID=Msa0134580-mRNA-1:cds;Parent=Msa0134580-mRNA-1 |
| chr1_3 | CDS | 66127202 | 66127297 | 66127202 | ID=Msa0134580-mRNA-1:cds;Parent=Msa0134580-mRNA-1 |
| chr1_3 | three_prime_UTR | 66127298 | 66127661 | 66127298 | ID=Msa0134580-mRNA-1:three_prime_utr;Parent=Msa0134580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
