AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1334560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1334560 MtrunA17_Chr4g0071391 92.375 459 29 4 1 457 1 455 0.0 787
Msa1334560 MtrunA17_Chr7g0258851 46.524 374 196 2 83 452 218 591 1.68e-131 392
Msa1334560 MtrunA17_Chr1g0175671 46.739 368 192 2 86 451 147 512 1.36e-130 387
Msa1334560 MtrunA17_Chr5g0413271 48.688 343 166 3 109 449 143 477 2.07e-129 383
Msa1334560 MtrunA17_Chr4g0068111 46.875 352 179 4 108 454 111 459 1.79e-127 377
Msa1334560 MtrunA17_Chr7g0269991 51.479 338 157 3 111 448 137 467 9.90e-127 376
Msa1334560 MtrunA17_Chr1g0213281 42.822 411 213 5 49 456 132 523 5.51e-126 376
Msa1334560 MtrunA17_Chr8g0368461 47.207 358 166 4 110 449 177 529 1.19e-125 375
Msa1334560 MtrunA17_Chr7g0259711 43.305 351 191 4 111 455 91 439 6.34e-104 317
Msa1334560 MtrunA17_Chr2g0287901 42.938 354 185 6 111 454 97 443 9.90e-101 308
Msa1334560 MtrunA17_Chr3g0105301 38.439 346 193 5 111 448 43 376 2.09e-90 279
Msa1334560 MtrunA17_Chr5g0430371 38.418 354 190 6 111 448 58 399 6.90e-89 276
Msa1334560 MtrunA17_Chr1g0171171 37.830 341 195 5 109 448 51 375 8.77e-86 267
Msa1334560 MtrunA17_Chr3g0097891 38.857 350 184 9 106 449 26 351 1.28e-83 261
Msa1334560 MtrunA17_Chr5g0413851 38.674 362 193 11 92 449 24 360 3.20e-83 260
Msa1334560 MtrunA17_Chr2g0325481 37.901 343 184 6 110 448 49 366 6.09e-83 260
Msa1334560 MtrunA17_Chr4g0045951 36.919 344 195 5 108 450 42 364 2.07e-82 258
Msa1334560 MtrunA17_Chr2g0314801 37.353 340 190 7 109 445 31 350 2.38e-82 258
Msa1334560 MtrunA17_Chr1g0210771 37.572 346 194 7 107 448 55 382 2.86e-82 258
Msa1334560 MtrunA17_Chr2g0283581 37.537 341 190 7 111 450 42 360 3.11e-82 258
Msa1334560 MtrunA17_Chr3g0126021 36.286 350 206 6 111 455 129 466 1.39e-81 259
Msa1334560 MtrunA17_Chr4g0006991 36.240 367 216 7 93 448 68 427 2.67e-81 258
Msa1334560 MtrunA17_Chr4g0045941 36.950 341 193 5 111 450 33 352 4.74e-81 254
Msa1334560 MtrunA17_Chr8g0384151 36.047 344 203 5 108 448 87 416 3.20e-79 252
Msa1334560 MtrunA17_Chr4g0041011 35.103 339 197 6 111 448 47 363 8.59e-79 249
Msa1334560 MtrunA17_Chr3g0085071 37.026 343 190 7 109 448 44 363 9.36e-79 249
Msa1334560 MtrunA17_Chr3g0085081 35.897 351 194 7 106 448 21 348 4.03e-76 241
Msa1334560 MtrunA17_Chr2g0314791 37.216 352 185 13 106 449 23 346 8.48e-76 241
Msa1334560 MtrunA17_Chr3g0091031 34.694 343 198 6 109 448 29 348 2.96e-75 239
Msa1334560 MtrunA17_Chr3g0113671 35.165 364 204 9 105 449 100 450 5.92e-74 239
Msa1334560 MtrunA17_Chr3g0114101 36.571 350 202 9 111 448 89 430 2.11e-73 237
Msa1334560 MtrunA17_Chr5g0437601 37.143 350 200 8 111 448 83 424 3.47e-73 236
Msa1334560 MtrunA17_Chr5g0437291 36.066 366 203 10 106 451 160 514 3.59e-72 236
Msa1334560 MtrunA17_Chr1g0178081 37.288 354 157 7 106 452 50 345 1.41e-71 230
Msa1334560 MtrunA17_Chr8g0360521 35.043 351 203 10 111 448 71 409 2.90e-71 231
Msa1334560 MtrunA17_Chr4g0005491 35.457 361 199 11 107 446 58 405 4.23e-71 231
Msa1334560 MtrunA17_Chr7g0242701 34.005 397 241 9 63 448 41 427 8.47e-70 228
Msa1334560 MtrunA17_Chr4g0005481 34.648 355 203 9 109 448 106 446 2.38e-68 224
Msa1334560 MtrunA17_Chr7g0243301 33.333 363 216 9 106 451 59 412 1.27e-66 219
Msa1334560 MtrunA17_Chr6g0476041 29.426 401 240 10 74 448 131 514 9.72e-53 185
Msa1334560 MtrunA17_Chr8g0347321 28.401 419 245 13 56 449 52 440 2.10e-50 177
Msa1334560 MtrunA17_Chr1g0188191 30.056 356 215 8 111 444 234 577 1.96e-49 177
Msa1334560 MtrunA17_Chr4g0049421 30.959 365 207 17 111 449 48 393 1.61e-48 171
Msa1334560 MtrunA17_Chr1g0209921 35.833 240 136 7 109 345 42 266 3.94e-47 163
Msa1334560 MtrunA17_Chr6g0456681 31.335 367 219 11 109 455 62 415 4.16e-47 167
Msa1334560 MtrunA17_Chr8g0391481 31.421 366 207 12 109 448 25 372 5.22e-47 166
Msa1334560 MtrunA17_Chr6g0456691 27.532 385 239 11 95 456 60 427 3.04e-46 166
Msa1334560 MtrunA17_Chr5g0414091 32.055 365 207 14 109 448 83 431 3.97e-46 165
Msa1334560 MtrunA17_Chr2g0283851 31.129 363 208 14 112 449 56 401 1.26e-44 160
Msa1334560 MtrunA17_Chr5g0414061 32.869 359 208 13 110 448 93 438 4.45e-44 160
Msa1334560 MtrunA17_Chr8g0387921 27.766 461 253 16 15 449 14 420 1.11e-43 158
Msa1334560 MtrunA17_Chr6g0451321 26.875 480 299 17 3 456 12 465 3.59e-43 158
Msa1334560 MtrunA17_Chr5g0414051 30.481 374 218 13 100 448 64 420 4.05e-43 157
Msa1334560 MtrunA17_Chr6g0455901 30.952 378 189 17 111 448 71 416 1.65e-42 155
Msa1334560 MtrunA17_Chr7g0226991 28.935 432 243 18 48 448 4 402 3.49e-42 154
Msa1334560 MtrunA17_Chr5g0414041 32.000 375 206 13 111 456 87 441 4.46e-42 154
Msa1334560 MtrunA17_Chr4g0070341 28.977 352 228 13 109 448 130 471 7.81e-42 154
Msa1334560 MtrunA17_Chr3g0140371 30.495 364 206 14 111 448 18 360 1.14e-41 152
Msa1334560 MtrunA17_Chr8g0384421 28.531 354 227 12 109 448 131 472 3.93e-41 152
Msa1334560 MtrunA17_Chr2g0287931 42.520 127 68 2 171 294 2 126 1.01e-29 112
Msa1334560 MtrunA17_Chr7g0221271 39.815 108 62 1 95 199 60 167 1.91e-23 97.8
Msa1334560 MtrunA17_Chr7g0221291 39.815 108 62 1 95 199 60 167 4.69e-23 95.5
Msa1334560 MtrunA17_Chr7g0221281 28.745 247 145 9 226 451 3 239 4.29e-20 89.7
Msa1334560 MtrunA17_Chr3g0085101 33.333 105 68 1 308 410 1 105 1.62e-17 78.6
Msa1334560 MtrunA17_Chr5g0414081 29.756 205 117 7 274 456 8 207 6.85e-17 79.3
Msa1334560 MtrunA17_Chr1g0209931 50.704 71 28 2 379 449 30 93 4.94e-15 70.9
Msa1334560 MtrunA17_Chr2g0287911 47.368 57 23 1 110 166 60 109 5.09e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1334560 AT5G20590.1 60.625 480 145 4 9 451 10 482 0.0 602
Msa1334560 AT5G20590.2 56.649 376 119 4 9 347 10 378 1.82e-150 433
Msa1334560 AT1G60790.1 49.304 359 177 3 96 449 175 533 6.88e-136 402
Msa1334560 AT5G06700.1 48.415 347 177 2 107 451 251 597 1.15e-132 396
Msa1334560 AT3G12060.1 48.286 350 179 1 104 451 189 538 1.22e-131 392
Msa1334560 AT3G62390.1 39.659 469 251 7 7 449 10 472 5.25e-127 377
Msa1334560 AT5G49340.1 46.197 355 187 3 102 452 91 445 2.43e-121 362
Msa1334560 AT3G06080.2 44.886 352 185 4 111 455 103 452 3.88e-109 331
Msa1334560 AT5G19160.1 42.973 370 191 6 99 452 83 448 3.63e-108 328
Msa1334560 AT3G62390.2 37.600 375 205 5 7 355 10 381 3.52e-91 283
Msa1334560 AT5G06230.2 39.886 351 197 5 109 449 19 365 1.54e-88 275
Msa1334560 AT5G06230.1 37.975 395 211 7 65 449 36 406 2.38e-88 276
Msa1334560 AT2G30900.1 40.173 346 180 8 109 448 41 365 3.12e-88 274
Msa1334560 AT1G48880.1 37.607 351 204 4 102 451 106 442 5.78e-88 276
Msa1334560 AT3G11570.1 40.557 323 184 3 131 449 102 420 1.63e-87 274
Msa1334560 AT2G31110.2 36.571 350 200 6 101 449 35 363 2.63e-86 269
Msa1334560 AT5G58600.1 37.822 349 194 9 111 449 66 401 5.47e-86 269
Msa1334560 AT1G78710.1 38.286 350 193 8 102 449 29 357 1.98e-85 266
Msa1334560 AT2G42570.1 36.056 355 203 6 95 448 33 364 4.00e-82 258
Msa1334560 AT3G54260.1 35.544 377 203 9 92 449 20 375 6.44e-82 258
Msa1334560 AT3G55990.1 34.411 433 250 12 37 449 66 484 1.15e-79 255
Msa1334560 AT2G30010.1 37.746 355 194 9 110 449 55 397 1.02e-78 250
Msa1334560 AT2G30010.2 37.746 355 194 9 110 449 98 440 2.22e-78 251
Msa1334560 AT2G34070.1 35.088 342 199 6 111 450 65 385 6.22e-78 248
Msa1334560 AT1G29050.1 34.311 341 202 5 111 450 61 380 1.99e-77 246
Msa1334560 AT3G14850.2 35.632 348 197 7 107 449 30 355 8.05e-76 241
Msa1334560 AT5G19160.2 44.531 256 133 3 99 347 83 336 1.24e-75 241
Msa1334560 AT2G40160.1 33.421 380 230 9 86 449 52 424 1.70e-74 240
Msa1334560 AT2G40160.2 33.684 380 229 9 86 449 52 424 3.64e-74 240
Msa1334560 AT3G06080.1 44.958 238 130 1 111 347 103 340 8.83e-74 236
Msa1334560 AT5G01360.2 34.435 363 215 9 100 448 25 378 4.07e-73 235
Msa1334560 AT1G73140.1 35.714 378 211 12 90 454 53 411 5.95e-73 236
Msa1334560 AT5G01360.1 34.435 363 215 9 100 448 81 434 1.46e-72 235
Msa1334560 AT2G40150.1 34.890 364 201 10 110 449 70 421 1.19e-71 233
Msa1334560 AT3G11030.1 34.278 353 207 9 111 448 106 448 1.25e-69 228
Msa1334560 AT5G01620.2 33.708 356 206 9 109 448 108 449 2.43e-69 228
Msa1334560 AT5G01620.1 33.708 356 206 9 109 448 108 449 2.43e-69 228
Msa1334560 AT5G01620.3 33.708 356 206 9 109 448 116 457 2.94e-69 228
Msa1334560 AT2G38320.1 32.231 363 210 10 109 449 57 405 1.10e-65 217
Msa1334560 AT2G40320.1 33.618 351 215 7 109 448 79 422 4.35e-65 216
Msa1334560 AT5G06230.3 35.495 293 162 4 65 350 36 308 4.34e-59 196
Msa1334560 AT1G78710.2 32.665 349 161 9 102 449 22 297 3.46e-58 194
Msa1334560 AT2G38320.2 32.121 330 189 9 141 449 7 322 4.50e-57 192
Msa1334560 AT2G31110.3 34.836 244 146 3 101 344 35 265 9.64e-56 186
Msa1334560 AT2G30900.2 38.723 235 127 5 109 340 41 261 1.28e-55 186
Msa1334560 AT4G25360.1 30.769 403 239 10 65 444 135 520 2.50e-55 192
Msa1334560 AT4G25360.2 30.769 403 239 10 65 444 135 520 2.50e-55 192
Msa1334560 AT5G58600.2 35.865 237 137 5 111 345 66 289 3.74e-53 180
Msa1334560 AT2G34070.2 33.824 272 157 6 181 450 1 251 7.74e-53 178
Msa1334560 AT1G01430.1 26.709 468 280 14 13 456 27 455 1.26e-50 178
Msa1334560 AT5G51640.1 30.556 396 231 12 82 448 108 488 2.14e-50 179
Msa1334560 AT1G70230.1 30.562 409 224 14 65 448 38 411 3.95e-50 176
Msa1334560 AT5G64470.3 30.812 357 214 15 111 450 55 395 1.08e-49 174
Msa1334560 AT5G15890.1 29.756 410 239 14 62 448 139 522 2.75e-48 173
Msa1334560 AT3G14850.1 34.307 274 153 7 181 449 1 252 3.15e-48 166
Msa1334560 AT5G64470.2 30.601 366 209 16 111 450 55 401 7.71e-48 169
Msa1334560 AT2G31110.1 37.500 224 123 5 227 448 6 214 2.79e-47 162
Msa1334560 AT4G01080.1 29.282 362 214 9 110 449 90 431 4.43e-47 168
Msa1334560 AT5G64020.1 30.748 361 218 13 111 448 57 408 9.86e-47 167
Msa1334560 AT2G40160.3 31.343 268 171 5 86 347 52 312 1.37e-46 164
Msa1334560 AT2G14530.1 29.670 364 211 16 111 448 62 406 8.05e-46 164
Msa1334560 AT3G28150.1 30.108 372 222 13 100 448 54 410 2.46e-44 160
Msa1334560 AT5G20680.6 28.501 407 246 12 61 448 77 457 2.41e-43 159
Msa1334560 AT5G20680.4 28.713 404 243 12 64 448 174 551 3.07e-43 160
Msa1334560 AT5G20680.1 28.713 404 243 12 64 448 174 551 3.07e-43 160
Msa1334560 AT5G20680.3 28.713 404 243 12 64 448 174 551 3.07e-43 160
Msa1334560 AT5G20680.5 28.713 404 243 12 64 448 174 551 3.07e-43 160
Msa1334560 AT5G20680.2 28.501 407 246 12 61 448 153 533 3.46e-43 160
Msa1334560 AT4G23790.1 29.167 384 229 14 92 449 62 428 4.26e-43 157
Msa1334560 AT3G02440.1 30.362 359 212 13 111 448 127 468 2.14e-42 156
Msa1334560 AT3G02440.2 30.362 359 212 13 111 448 135 476 2.32e-42 156
Msa1334560 AT4G11090.1 29.288 379 233 15 96 453 66 430 4.00e-40 149
Msa1334560 AT5G15900.1 27.027 370 233 11 100 448 56 409 7.46e-38 143
Msa1334560 AT5G15900.2 27.027 370 233 11 100 448 75 428 8.30e-38 143
Msa1334560 AT2G37720.1 28.997 369 216 17 104 448 136 482 8.60e-38 144
Msa1334560 AT5G64470.4 29.213 267 164 10 105 357 49 304 8.02e-33 127
Msa1334560 AT5G64470.1 29.213 267 164 10 105 357 49 304 1.27e-32 126

Find 170 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGCCATTGGTGTCTTCC+TGG 0.168068 8_4:-55019587 Msa1334560:CDS
GCCTCAACTCCATCAAATTT+TGG 0.182186 8_4:+55020494 None:intergenic
GATATTCTTCTGCTCATTTC+AGG 0.196516 8_4:-55020391 Msa1334560:intron
GACCAATTATTATATTTATA+TGG 0.267655 8_4:+55023497 None:intergenic
GTTGCTATGCGACCTGGATT+TGG 0.298382 8_4:+55023432 None:intergenic
TTAAAGAGTCCTTTCTTTGC+AGG 0.298621 8_4:-55019493 Msa1334560:three_prime_UTR
CTATAAAGACATGGGGAAAA+TGG 0.301251 8_4:-55020460 Msa1334560:CDS
GTTACATTTAGTAATTTAAC+TGG 0.305417 8_4:+55019701 None:intergenic
AACCATATAAATATAATAAT+TGG 0.306901 8_4:-55023499 Msa1334560:five_prime_UTR
TATCTATATCCAAAATTTGA+TGG 0.330959 8_4:-55020503 Msa1334560:CDS
AGATAAATTAACCAGGCTTT+GGG 0.335048 8_4:-55019196 Msa1334560:three_prime_UTR
TAGATAAATTAACCAGGCTT+TGG 0.338245 8_4:-55019197 Msa1334560:three_prime_UTR
GAGAGAGAGAAGGTATGATA+TGG 0.338426 8_4:+55023249 None:intergenic
GTCTTTGGCAAGAGCATAAC+AGG 0.347223 8_4:-55019641 Msa1334560:CDS
TTTGTACAAACCTCTATTCC+TGG 0.360129 8_4:-55023546 Msa1334560:five_prime_UTR
AATTCATGGGGTGGAAATTA+CGG 0.361129 8_4:+55019249 None:intergenic
CACACAGAATGGACTCGAAT+TGG 0.368869 8_4:+55021742 None:intergenic
GGTGAGATCAAGACCATTAC+AGG 0.369615 8_4:+55019271 None:intergenic
GATGGTCACCCATCTGTCTT+TGG 0.372601 8_4:-55019656 Msa1334560:CDS
GCTGCAGTCCTGCCGCTTCA+TGG 0.385392 8_4:+55019604 None:intergenic
AGAGACATTTGATGAATTCA+TGG 0.386113 8_4:+55019235 None:intergenic
ATCTACTCCATTACGAGATT+AGG 0.390804 8_4:-55019055 Msa1334560:three_prime_UTR
GAATGGACTCGAATTGGTTT+CGG 0.393223 8_4:+55021748 None:intergenic
AGGATGGACCCATTTAAAAC+TGG 0.405373 8_4:+55019782 None:intergenic
CAAGAACCTGGTTCATAAAT+CGG 0.407682 8_4:+55023020 None:intergenic
GTGGAGGATTGTTGCGGTGG+TGG 0.408628 8_4:+55023221 None:intergenic
AGAACAATGCGAGGAAGAAA+AGG 0.413314 8_4:+55023357 None:intergenic
TTGTACATCAAAATCTAATC+AGG 0.413672 8_4:+55019160 None:intergenic
GCAGCCATTGGTGTCTTCCT+GGG 0.414628 8_4:-55019586 Msa1334560:CDS
TTCTTCGTTGCTATGCGACC+TGG 0.418201 8_4:+55023426 None:intergenic
ATTCATGGGGTGGAAATTAC+GGG 0.423902 8_4:+55019250 None:intergenic
TGATGCGATTCTAGCTTTGA+AGG 0.426591 8_4:-55023087 Msa1334560:CDS
ACCGGGCACTGGTGGGCTCA+TGG 0.427472 8_4:-55020991 Msa1334560:CDS
TTGTCATGATATACAACTAA+TGG 0.429066 8_4:+55019401 None:intergenic
TCTTCAACACCGGGCACTGG+TGG 0.429397 8_4:-55020999 Msa1334560:CDS
TCTTTGACAGAGGTGGAGAC+TGG 0.430709 8_4:-55019838 Msa1334560:intron
TTTATCATGTTTCCAAATCC+AGG 0.432169 8_4:-55023444 Msa1334560:five_prime_UTR
GATTGTTGCGGTGGTGGCGG+CGG 0.435023 8_4:+55023227 None:intergenic
GACATTCTCGTCTTCAACAC+CGG 0.435168 8_4:-55021009 Msa1334560:CDS
GTGTTTCATTTCACCTGTAA+TGG 0.437603 8_4:-55019284 Msa1334560:three_prime_UTR
ATGAGGTTTCCAGCGCCATT+TGG 0.439292 8_4:+55022938 None:intergenic
AGAAAGAAGTAAAGAAGAGA+AGG 0.439632 8_4:-55019449 Msa1334560:three_prime_UTR
AGAGGTGGAGACTGGGACTC+AGG 0.443792 8_4:-55019830 Msa1334560:CDS
AGACCGATGGAGAGACGTTA+AGG 0.448977 8_4:+55019117 None:intergenic
AGATCTGTGTGAGGAGAGAG+AGG 0.459272 8_4:+55023278 None:intergenic
ATTAGCTCATTCCATGCATC+AGG 0.462538 8_4:+55019560 None:intergenic
TCCATGAGCCCACCAGTGCC+CGG 0.463009 8_4:+55020990 None:intergenic
TGAGCTAATTTATGCCACTT+TGG 0.465610 8_4:-55019546 Msa1334560:CDS
GAGGATTGTTGCGGTGGTGG+CGG 0.467782 8_4:+55023224 None:intergenic
TCCTTTGAAAATGAAGATAG+TGG 0.468152 8_4:-55019750 Msa1334560:CDS
ACACGATCCTGCTGAATTCA+CGG 0.468320 8_4:+55019303 None:intergenic
GCGATTTATACAATGGAACT+TGG 0.468450 8_4:-55023061 Msa1334560:CDS
CTACTGATGACCAGGAATAG+AGG 0.475718 8_4:+55023536 None:intergenic
GATAGTGGAAGAAGTGATCC+TGG 0.478208 8_4:-55019735 Msa1334560:CDS
TTCCACCCCGTGAATTCAGC+AGG 0.482844 8_4:-55019310 Msa1334560:three_prime_UTR
CACGATCCTGCTGAATTCAC+GGG 0.486381 8_4:+55019304 None:intergenic
TAACCAGGCTTTGGGGTGTA+GGG 0.489490 8_4:-55019188 Msa1334560:three_prime_UTR
GTCAGCCCTCTTCCAGCGGT+TGG 0.489842 8_4:+55021029 None:intergenic
ATGATACTCATTATACCAAA+TGG 0.490084 8_4:-55022953 Msa1334560:CDS
CTTTGACAGAGGTGGAGACT+GGG 0.493381 8_4:-55019837 Msa1334560:intron
GCTTATGATTGCAAAATCAA+TGG 0.496546 8_4:-55022981 Msa1334560:CDS
GAGACATTTGATGAATTCAT+GGG 0.496859 8_4:+55019236 None:intergenic
TTAACCAGGCTTTGGGGTGT+AGG 0.497656 8_4:-55019189 Msa1334560:three_prime_UTR
TTGAATGTCGGTAACGGTGG+TGG 0.500175 8_4:+55023202 None:intergenic
TGAGATCTCATTTCCTTGTG+AGG 0.501551 8_4:-55021122 Msa1334560:CDS
GAAAGAAGTAAAGAAGAGAA+GGG 0.502261 8_4:-55019448 Msa1334560:three_prime_UTR
TAACTGGAACCTTCATTCCC+AGG 0.502611 8_4:+55019717 None:intergenic
GAAAGGTAAACAACTAATGC+TGG 0.505310 8_4:-55021787 Msa1334560:CDS
TCGTCTTCAACACCGGGCAC+TGG 0.506054 8_4:-55021002 Msa1334560:CDS
ATCGACAGTGGCACCGCCAA+TGG 0.506656 8_4:+55023169 None:intergenic
CAAAGGATAGTTATTCAGGA+TGG 0.507427 8_4:+55019766 None:intergenic
CTTCAACACCGGGCACTGGT+GGG 0.508299 8_4:-55020998 Msa1334560:CDS
AAGTATACTCCTGCAAAGAA+AGG 0.508890 8_4:+55019484 None:intergenic
AAGGAATGCGATTTATACAA+TGG 0.511789 8_4:-55023068 Msa1334560:CDS
CTCATTATACCAAATGGCGC+TGG 0.512407 8_4:-55022947 Msa1334560:CDS
AGAAGTGATCCTGGGAATGA+AGG 0.515523 8_4:-55019726 Msa1334560:CDS
CTAATCTACTACTGATGACC+AGG 0.515909 8_4:+55023528 None:intergenic
AGACGTCCAACCGCTGGAAG+AGG 0.517702 8_4:-55021035 Msa1334560:CDS
AGCGGCAGGACTGCAGCCAT+TGG 0.523845 8_4:-55019598 Msa1334560:CDS
GTGTGTACTTCGTGAAGGCT+TGG 0.524231 8_4:-55021724 Msa1334560:CDS
TTCACGAAGTACACACAGAA+TGG 0.526243 8_4:+55021731 None:intergenic
GAGATCTCATTTCCTTGTGA+GGG 0.527350 8_4:-55021121 Msa1334560:CDS
GACTCAGGTGGGTCATGCTA+CGG 0.527562 8_4:-55019815 Msa1334560:CDS
TTCCATGCATCAGGTACCCC+AGG 0.530759 8_4:+55019569 None:intergenic
ATCTCATTTCCTTGTGAGGG+AGG 0.531071 8_4:-55021118 Msa1334560:CDS
GAACCCTACACCCCAAAGCC+TGG 0.531157 8_4:+55019185 None:intergenic
TTCCTGGGGTACCTGATGCA+TGG 0.531298 8_4:-55019571 Msa1334560:CDS
AATAGAGAAGGACAACAAGC+AGG 0.532438 8_4:+55018992 None:intergenic
CATGGTCACACAATATCTAA+AGG 0.534276 8_4:-55021675 Msa1334560:CDS
AATGTCGGTAACGGTGGTGG+AGG 0.538791 8_4:+55023205 None:intergenic
GACAGTGGCACCGCCAATGG+AGG 0.539372 8_4:+55023172 None:intergenic
TCCAAAATTTGATGGAGTTG+AGG 0.539425 8_4:-55020495 Msa1334560:CDS
CAACCTCAACCCTCCATTGG+CGG 0.539489 8_4:-55023182 Msa1334560:CDS
TTGACAAGACGTCCAACCGC+TGG 0.543425 8_4:-55021041 Msa1334560:CDS
ATTCAACCTCAACCCTCCAT+TGG 0.545044 8_4:-55023185 Msa1334560:CDS
AGAATAAATTACTATAAAGA+AGG 0.546605 8_4:-55020530 Msa1334560:CDS
GAAAGTCTCCATGAAGCGGC+AGG 0.547739 8_4:-55019612 Msa1334560:CDS
CACACAATATCTAAAGGAAG+AGG 0.548764 8_4:-55021669 Msa1334560:CDS
ATCCTACATTGTCAATAGAT+CGG 0.548798 8_4:-55021065 Msa1334560:CDS
CAACAGCTGATAGCATGATA+AGG 0.551187 8_4:-55019354 Msa1334560:three_prime_UTR
CTGACTAATTTCCGCAAGGA+TGG 0.554074 8_4:-55019674 Msa1334560:CDS
TTACTGTAGGTTTAGTGCCA+AGG 0.554186 8_4:-55021826 Msa1334560:intron
AGACATACCTAATCTCGTAA+TGG 0.554283 8_4:+55019048 None:intergenic
AAATGGCGCTGGAAACCTCA+TGG 0.554636 8_4:-55022936 Msa1334560:CDS
AAAGGGTCGCGACAGTGTAA+CGG 0.558790 8_4:+55023375 None:intergenic
CGACAGTGTAACGGTTATTG+TGG 0.561678 8_4:+55023384 None:intergenic
ATACAATGGAACTTGGGTAG+AGG 0.561813 8_4:-55023054 Msa1334560:CDS
GGTGGAGACTGGGACTCAGG+TGG 0.563762 8_4:-55019827 Msa1334560:CDS
CAGCCATTGGTGTCTTCCTG+GGG 0.564368 8_4:-55019585 Msa1334560:CDS
TGCTCTTGCCAAAGACAGAT+GGG 0.565108 8_4:+55019648 None:intergenic
TCTCATTTCCTTGTGAGGGA+GGG 0.571728 8_4:-55021117 Msa1334560:CDS
CGATTTATACAATGGAACTT+GGG 0.573614 8_4:-55023060 Msa1334560:CDS
GTGGAGACTGGGACTCAGGT+GGG 0.575618 8_4:-55019826 Msa1334560:CDS
CAGAAAGGCTATAAAGACAT+GGG 0.576036 8_4:-55020468 Msa1334560:CDS
CTCATGGATGTGATCTTCCA+AGG 0.576806 8_4:-55022920 Msa1334560:intron
ATTCTGTGTGTACTTCGTGA+AGG 0.579237 8_4:-55021729 Msa1334560:CDS
ATGATTGCAAAATCAATGGA+AGG 0.581693 8_4:-55022977 Msa1334560:CDS
GACGTCCAACCGCTGGAAGA+GGG 0.584315 8_4:-55021034 Msa1334560:CDS
ATCCGATCTATTGACAATGT+AGG 0.584511 8_4:+55021063 None:intergenic
ATGCTCTTGCCAAAGACAGA+TGG 0.584534 8_4:+55019647 None:intergenic
GATTATCCGATTTATGAACC+AGG 0.585634 8_4:-55023026 Msa1334560:CDS
AGCAAAATGTATGAGATACA+TGG 0.585784 8_4:-55021693 Msa1334560:CDS
TCATAAGCTTCATCAACGTA+AGG 0.586089 8_4:+55022996 None:intergenic
AAGCAGATTGTCTACTATCG+TGG 0.591772 8_4:-55020413 Msa1334560:CDS
TGAGCAGGACTATGATTGTA+CGG 0.591789 8_4:-55021154 Msa1334560:intron
TGGAGATAGAGATCTGTGTG+AGG 0.592073 8_4:+55023269 None:intergenic
TAACCTTAACGTCTCTCCAT+CGG 0.593598 8_4:-55019120 Msa1334560:three_prime_UTR
ACATTCTCGTCTTCAACACC+GGG 0.594424 8_4:-55021008 Msa1334560:CDS
ACAGTGGCACCGCCAATGGA+GGG 0.595559 8_4:+55023173 None:intergenic
TTGAGGTTGAATGTCGGTAA+CGG 0.595881 8_4:+55023196 None:intergenic
GAACAATGCGAGGAAGAAAA+GGG 0.596574 8_4:+55023358 None:intergenic
TGGAGTTGAGGCATACAGAA+AGG 0.596745 8_4:-55020483 Msa1334560:CDS
GCACCGCCAATGGAGGGTTG+AGG 0.598777 8_4:+55023179 None:intergenic
GGTAAACAACTAATGCTGGT+AGG 0.608787 8_4:-55021783 Msa1334560:CDS
ATAGTGGAAGAAGTGATCCT+GGG 0.612075 8_4:-55019734 Msa1334560:CDS
ACAGAAAGGCTATAAAGACA+TGG 0.612533 8_4:-55020469 Msa1334560:CDS
GTCTGTATTCGTAACAGCAA+CGG 0.613924 8_4:+55023121 None:intergenic
TGTCTGTTGCAAAACCAAAG+TGG 0.617839 8_4:+55019532 None:intergenic
TACGAACTCCCTCCCTCACA+AGG 0.618151 8_4:+55021109 None:intergenic
GCAAGAGCATAACAGGTGGA+AGG 0.619291 8_4:-55019634 Msa1334560:CDS
TCAACGTAAGGACAAGAACC+TGG 0.622466 8_4:+55023008 None:intergenic
CATTTGATGAATTCATGGGG+TGG 0.625552 8_4:+55019240 None:intergenic
GGAGTTCGTATGAATGCACA+AGG 0.632015 8_4:-55021096 Msa1334560:CDS
GATCTTACACGTGAGATGCA+CGG 0.634627 8_4:+55023475 None:intergenic
GAAGGAAAGTCTCCATGAAG+CGG 0.635411 8_4:-55019616 Msa1334560:CDS
GTGGTGGAGGATTGTTGCGG+TGG 0.637075 8_4:+55023218 None:intergenic
CAGACATTAGCAAATAGAGA+AGG 0.637709 8_4:+55018980 None:intergenic
GGTGGCGGCGGAGAGAGAGA+AGG 0.641683 8_4:+55023239 None:intergenic
AAAGCTGACTAATTTCCGCA+AGG 0.645537 8_4:-55019678 Msa1334560:CDS
TTGTGAGAAAGAACAATGCG+AGG 0.647296 8_4:+55023348 None:intergenic
AGAAGGGCAGTTGAGTACAA+TGG 0.648447 8_4:-55019432 Msa1334560:three_prime_UTR
GATAAATTAACCAGGCTTTG+GGG 0.651974 8_4:-55019195 Msa1334560:three_prime_UTR
GAATGTCAGCCCTCTTCCAG+CGG 0.657009 8_4:+55021025 None:intergenic
GTGTGCGAGAATGAGACCGA+TGG 0.667407 8_4:+55019104 None:intergenic
AAAGCGTAGATAAATTAACC+AGG 0.668602 8_4:-55019203 Msa1334560:three_prime_UTR
AGACATTTGATGAATTCATG+GGG 0.674647 8_4:+55019237 None:intergenic
AGAAAGGCTATAAAGACATG+GGG 0.676470 8_4:-55020467 Msa1334560:CDS
ATGATCATCGACATCGACAG+TGG 0.680354 8_4:+55023157 None:intergenic
TGTGTGAGGAGAGAGAGGAG+TGG 0.682320 8_4:+55023283 None:intergenic
AGGTTGAATGTCGGTAACGG+TGG 0.682616 8_4:+55023199 None:intergenic
GGAGGGTTGAGGTTGAATGT+CGG 0.682787 8_4:+55023190 None:intergenic
GTACCCCAGGAAGACACCAA+TGG 0.683720 8_4:+55019582 None:intergenic
ATCCTGCTGAATTCACGGGG+TGG 0.683840 8_4:+55019308 None:intergenic
TGCTGTTACGAATACAGACG+AGG 0.687566 8_4:-55023117 Msa1334560:CDS
CAGATGGGTGACCATCCTTG+CGG 0.688035 8_4:+55019663 None:intergenic
ACGGTGGTGGAGGATTGTTG+CGG 0.694908 8_4:+55023215 None:intergenic
TTTGGCAAGAGCATAACAGG+TGG 0.699834 8_4:-55019638 Msa1334560:CDS
CTTGGAAGATCACATCCATG+AGG 0.719148 8_4:+55022921 None:intergenic
ACGATCCTGCTGAATTCACG+GGG 0.720946 8_4:+55019305 None:intergenic
GAGTTCGTATGAATGCACAA+GGG 0.808659 8_4:-55021095 Msa1334560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCATATAAATATAATAAT+TGG - chr8_4:55019034-55019053 Msa1334560:three_prime_UTR 10.0%
!! GACCAATTATTATATTTATA+TGG + chr8_4:55019039-55019058 None:intergenic 15.0%
!! AAATACTTACAAAATGATTA+AGG - chr8_4:55021271-55021290 Msa1334560:intron 15.0%
!!! ATGTTTATCTTGTTAAATTT+TGG - chr8_4:55021839-55021858 Msa1334560:intron 15.0%
!!! ATAAAAACTAATTTGTGAAA+GGG + chr8_4:55021872-55021891 None:intergenic 15.0%
!!! AATAAAAACTAATTTGTGAA+AGG + chr8_4:55021873-55021892 None:intergenic 15.0%
!! AGAATAAATTACTATAAAGA+AGG - chr8_4:55022003-55022022 Msa1334560:intron 15.0%
!!! TAAAATTTTTACAAAATACG+AGG + chr8_4:55022236-55022255 None:intergenic 15.0%
!! TAAATAGGATTCAAGTAATT+TGG - chr8_4:55019753-55019772 Msa1334560:CDS 20.0%
!!! AAGTAATTTGGTTTGATTTA+GGG - chr8_4:55019765-55019784 Msa1334560:CDS 20.0%
!! TATATGTCAAATGATTAAGA+TGG - chr8_4:55020280-55020299 Msa1334560:intron 20.0%
!! TAATAAGTAGTTCATGTAAT+TGG + chr8_4:55020998-55021017 None:intergenic 20.0%
!!! ATAAAGTACTGTCTATATTT+TGG - chr8_4:55021223-55021242 Msa1334560:intron 20.0%
!!! CAGATTTTATTATTTTCACA+GGG + chr8_4:55021316-55021335 None:intergenic 20.0%
!! TGAAAATAATAAAATCTGGA+TGG - chr8_4:55021318-55021337 Msa1334560:intron 20.0%
!! GAAAATAATAAAATCTGGAT+GGG - chr8_4:55021319-55021338 Msa1334560:intron 20.0%
!! TGTTAGAATTCAATAAACAT+GGG + chr8_4:55021667-55021686 None:intergenic 20.0%
!! ATGTTAGAATTCAATAAACA+TGG + chr8_4:55021668-55021687 None:intergenic 20.0%
!! ATGTTTATTGAATTCTAACA+TGG - chr8_4:55021667-55021686 Msa1334560:CDS 20.0%
!! AACATGGTCAAAAAATAAAA+AGG - chr8_4:55021683-55021702 Msa1334560:CDS 20.0%
!! TATCTATATCCAAAATTTGA+TGG - chr8_4:55022030-55022049 Msa1334560:intron 20.0%
!!! TAAAAGATTTAGCTACTTTT+AGG - chr8_4:55022254-55022273 Msa1334560:intron 20.0%
!! GTTACATTTAGTAATTTAAC+TGG + chr8_4:55022835-55022854 None:intergenic 20.0%
! ATGATACTCATTATACCAAA+TGG - chr8_4:55019580-55019599 Msa1334560:CDS 25.0%
! TCAATGTGATGTTCATAAAT+AGG - chr8_4:55019738-55019757 Msa1334560:CDS 25.0%
!!! CAAGTAATTTGGTTTGATTT+AGG - chr8_4:55019764-55019783 Msa1334560:CDS 25.0%
! TGCTGCTACTATTTATTAAA+CGG - chr8_4:55019796-55019815 Msa1334560:CDS 25.0%
! GAAATTATTTACCATGTTTG+CGG - chr8_4:55019977-55019996 Msa1334560:intron 25.0%
!!! GGTGGATTAAATTAAATTCT+GGG - chr8_4:55019998-55020017 Msa1334560:intron 25.0%
! GTTATCATGATAATAATGAG+TGG - chr8_4:55020063-55020082 Msa1334560:intron 25.0%
!! TCAAATGATTAAGATGGATT+TGG - chr8_4:55020286-55020305 Msa1334560:intron 25.0%
!! TCATGCTTTTCAATTTTCAT+GGG + chr8_4:55020389-55020408 None:intergenic 25.0%
!! ATCATGCTTTTCAATTTTCA+TGG + chr8_4:55020390-55020409 None:intergenic 25.0%
! AATTGTTTCCACAAATAGAA+TGG + chr8_4:55020476-55020495 None:intergenic 25.0%
!! TGGAAACAATTTTAAACTTG+TGG - chr8_4:55020485-55020504 Msa1334560:CDS 25.0%
!! GGAAACAATTTTAAACTTGT+GGG - chr8_4:55020486-55020505 Msa1334560:CDS 25.0%
!!! CTACTTTGTTTTCAAATTTG+AGG - chr8_4:55020887-55020906 Msa1334560:intron 25.0%
!!! TGAATTCAATGTCATTTTCT+GGG + chr8_4:55021173-55021192 None:intergenic 25.0%
!!! ATGAATTCAATGTCATTTTC+TGG + chr8_4:55021174-55021193 None:intergenic 25.0%
!! CCAGATTTTATTATTTTCAC+AGG + chr8_4:55021317-55021336 None:intergenic 25.0%
! CCTGTGAAAATAATAAAATC+TGG - chr8_4:55021314-55021333 Msa1334560:intron 25.0%
!! TGTTCATTATGCTAAGATTT+TGG - chr8_4:55021350-55021369 Msa1334560:intron 25.0%
! TTAGAATTCAATAAACATGG+GGG + chr8_4:55021665-55021684 None:intergenic 25.0%
! GTTAGAATTCAATAAACATG+GGG + chr8_4:55021666-55021685 None:intergenic 25.0%
! ATCAACCGATTATATGTATT+AGG - chr8_4:55021792-55021811 Msa1334560:CDS 25.0%
! TCTTGCCTAATACATATAAT+CGG + chr8_4:55021800-55021819 None:intergenic 25.0%
! GTCTGTCAAAAATAAACAAT+GGG - chr8_4:55021937-55021956 Msa1334560:intron 25.0%
! ATACAGTTATAACTATTGTC+TGG - chr8_4:55022306-55022325 Msa1334560:intron 25.0%
! CATAATGATGTTGGAATATA+AGG + chr8_4:55022504-55022523 None:intergenic 25.0%
! CTTATATTCCAACATCATTA+TGG - chr8_4:55022502-55022521 Msa1334560:intron 25.0%
!!! TTTTTTCTCCTTTCTATTTG+AGG + chr8_4:55022621-55022640 None:intergenic 25.0%
!!! AAACTGAACCAGTTTTAAAT+GGG - chr8_4:55022743-55022762 Msa1334560:intron 25.0%
!! TTTTCAAAGGATAGTTATTC+AGG + chr8_4:55022774-55022793 None:intergenic 25.0%
! TTGTCATGATATACAACTAA+TGG + chr8_4:55023135-55023154 None:intergenic 25.0%
! TTGTACATCAAAATCTAATC+AGG + chr8_4:55023376-55023395 None:intergenic 25.0%
TTTATCATGTTTCCAAATCC+AGG - chr8_4:55019089-55019108 Msa1334560:three_prime_UTR 30.0%
AAGGAATGCGATTTATACAA+TGG - chr8_4:55019465-55019484 Msa1334560:three_prime_UTR 30.0%
CGATTTATACAATGGAACTT+GGG - chr8_4:55019473-55019492 Msa1334560:three_prime_UTR 30.0%
GCTTATGATTGCAAAATCAA+TGG - chr8_4:55019552-55019571 Msa1334560:CDS 30.0%
ATGATTGCAAAATCAATGGA+AGG - chr8_4:55019556-55019575 Msa1334560:CDS 30.0%
GTTGAAAATGACATCACAAA+CGG + chr8_4:55019676-55019695 None:intergenic 30.0%
AGATTTGAATCCATTAGAGA+AGG - chr8_4:55019937-55019956 Msa1334560:intron 30.0%
!! CGGTGGATTAAATTAAATTC+TGG - chr8_4:55019997-55020016 Msa1334560:intron 30.0%
ATGATAATAATGAGTGGACA+GGG - chr8_4:55020069-55020088 Msa1334560:intron 30.0%
!! AAAAGCATTATGCAGAAAGT+TGG - chr8_4:55020107-55020126 Msa1334560:intron 30.0%
CCTGTCTAAATAACTTAAGA+CGG + chr8_4:55020165-55020184 None:intergenic 30.0%
!! CAAAACACAGTAAGTTTTGA+AGG + chr8_4:55020431-55020450 None:intergenic 30.0%
TAATATGTGAAAGAAGTGGA+CGG + chr8_4:55020690-55020709 None:intergenic 30.0%
ACAGTAATATGTGAAAGAAG+TGG + chr8_4:55020694-55020713 None:intergenic 30.0%
CTTCTTTCACATATTACTGT+AGG - chr8_4:55020694-55020713 Msa1334560:intron 30.0%
AGCAAAATGTATGAGATACA+TGG - chr8_4:55020840-55020859 Msa1334560:intron 30.0%
TTTGTAAGTTTGTCTCTTCA+AGG - chr8_4:55021065-55021084 Msa1334560:CDS 30.0%
! TTATTTTCACAGGGAAATGA+TGG + chr8_4:55021307-55021326 None:intergenic 30.0%
ATCCTACATTGTCAATAGAT+CGG - chr8_4:55021468-55021487 Msa1334560:intron 30.0%
TGATTGTGTACATTCAATTC+AGG - chr8_4:55021612-55021631 Msa1334560:intron 30.0%
CCAAGAGAAGTTACAAATAT+AGG + chr8_4:55021743-55021762 None:intergenic 30.0%
CCTATATTTGTAACTTCTCT+TGG - chr8_4:55021740-55021759 Msa1334560:CDS 30.0%
!!! CAGACGACTTGTTAATTTTA+TGG + chr8_4:55021922-55021941 None:intergenic 30.0%
CGTCTGTCAAAAATAAACAA+TGG - chr8_4:55021936-55021955 Msa1334560:intron 30.0%
!!! TAGTAGACAATCTGCTTTTT+TGG + chr8_4:55022117-55022136 None:intergenic 30.0%
GGTAGAAATAAACTGGAAAA+CGG + chr8_4:55022208-55022227 None:intergenic 30.0%
AACTATTGTCTGGAAATCAA+TGG - chr8_4:55022316-55022335 Msa1334560:intron 30.0%
! CTAAGTGATTTTCAACTTCA+TGG + chr8_4:55022386-55022405 None:intergenic 30.0%
CTATCATTCCTCAAATAGAA+AGG - chr8_4:55022610-55022629 Msa1334560:intron 30.0%
CAGCAATATGATATGACTTA+TGG + chr8_4:55022670-55022689 None:intergenic 30.0%
!!! GAAACTGAACCAGTTTTAAA+TGG - chr8_4:55022742-55022761 Msa1334560:intron 30.0%
! TCCTTTGAAAATGAAGATAG+TGG - chr8_4:55022783-55022802 Msa1334560:intron 30.0%
! TCCACTATCTTCATTTTCAA+AGG + chr8_4:55022787-55022806 None:intergenic 30.0%
! TTTTGCAACAGACAAATTCA+AGG - chr8_4:55023010-55023029 Msa1334560:CDS 30.0%
AGAAAGAAGTAAAGAAGAGA+AGG - chr8_4:55023084-55023103 Msa1334560:CDS 30.0%
GAAAGAAGTAAAGAAGAGAA+GGG - chr8_4:55023085-55023104 Msa1334560:CDS 30.0%
!!! TGATAAGGCTTTTTCATTGA+TGG - chr8_4:55023194-55023213 Msa1334560:CDS 30.0%
AGACATTTGATGAATTCATG+GGG + chr8_4:55023299-55023318 None:intergenic 30.0%
GAGACATTTGATGAATTCAT+GGG + chr8_4:55023300-55023319 None:intergenic 30.0%
AGAGACATTTGATGAATTCA+TGG + chr8_4:55023301-55023320 None:intergenic 30.0%
AAAGCGTAGATAAATTAACC+AGG - chr8_4:55023330-55023349 Msa1334560:CDS 30.0%
TAGATAAATTAACCAGGCTT+TGG - chr8_4:55023336-55023355 Msa1334560:CDS 30.0%
AGATAAATTAACCAGGCTTT+GGG - chr8_4:55023337-55023356 Msa1334560:CDS 30.0%
TTTGTACAAACCTCTATTCC+TGG - chr8_4:55018987-55019006 Msa1334560:three_prime_UTR 35.0%
GCGATTTATACAATGGAACT+TGG - chr8_4:55019472-55019491 Msa1334560:three_prime_UTR 35.0%
GATTATCCGATTTATGAACC+AGG - chr8_4:55019507-55019526 Msa1334560:exon 35.0%
CAAGAACCTGGTTCATAAAT+CGG + chr8_4:55019516-55019535 None:intergenic 35.0%
TCATAAGCTTCATCAACGTA+AGG + chr8_4:55019540-55019559 None:intergenic 35.0%
AATTCATTAGAGAGTGACCT+TGG + chr8_4:55019633-55019652 None:intergenic 35.0%
TAACGCGATTTGATTGTCAA+GGG + chr8_4:55019899-55019918 None:intergenic 35.0%
ATAACGCGATTTGATTGTCA+AGG + chr8_4:55019900-55019919 None:intergenic 35.0%
TATTCAACAGCCTTCTCTAA+TGG + chr8_4:55019950-55019969 None:intergenic 35.0%
ATTATTTACCATGTTTGCGG+TGG - chr8_4:55019980-55019999 Msa1334560:intron 35.0%
AATTTAATCCACCGCAAACA+TGG + chr8_4:55019991-55020010 None:intergenic 35.0%
! TTTTCCCAACATTGAACTCA+AGG + chr8_4:55020034-55020053 None:intergenic 35.0%
CATGATAATAATGAGTGGAC+AGG - chr8_4:55020068-55020087 Msa1334560:intron 35.0%
CCGTCTTAAGTTATTTAGAC+AGG - chr8_4:55020162-55020181 Msa1334560:intron 35.0%
TTATAGAGGGAAGATTGGAT+TGG - chr8_4:55020211-55020230 Msa1334560:intron 35.0%
!! TGGATTGGTAGTAGATAGTT+CGG - chr8_4:55020226-55020245 Msa1334560:intron 35.0%
! GTTCGGTAACTGTTGATAAA+TGG - chr8_4:55020243-55020262 Msa1334560:intron 35.0%
AATTCAAATTGAAGAGCTCC+AGG - chr8_4:55020350-55020369 Msa1334560:intron 35.0%
!!! CAGTAAGTTTTGAAGGAACA+CGG + chr8_4:55020424-55020443 None:intergenic 35.0%
! TGTTTTGCCAGCAATTTTTC+AGG - chr8_4:55020444-55020463 Msa1334560:CDS 35.0%
GTCAATTCCTGAAAAATTGC+TGG + chr8_4:55020454-55020473 None:intergenic 35.0%
GGAATTGACCATTCTATTTG+TGG - chr8_4:55020465-55020484 Msa1334560:CDS 35.0%
! AAGCATAGCTTCTTTTGATG+TGG - chr8_4:55020528-55020547 Msa1334560:CDS 35.0%
GAAAGGTAAACAACTAATGC+TGG - chr8_4:55020746-55020765 Msa1334560:intron 35.0%
CATGGTCACACAATATCTAA+AGG - chr8_4:55020858-55020877 Msa1334560:intron 35.0%
CACACAATATCTAAAGGAAG+AGG - chr8_4:55020864-55020883 Msa1334560:intron 35.0%
TTTGTCTCTTCAAGGTTTGA+TGG - chr8_4:55021073-55021092 Msa1334560:CDS 35.0%
TTGTCTCTTCAAGGTTTGAT+GGG - chr8_4:55021074-55021093 Msa1334560:CDS 35.0%
ATCCGATCTATTGACAATGT+AGG + chr8_4:55021473-55021492 None:intergenic 35.0%
GTACATTCAATTCAGGAAAC+TGG - chr8_4:55021619-55021638 Msa1334560:intron 35.0%
! AGTTTTTATTCCCTGCTATG+TGG - chr8_4:55021883-55021902 Msa1334560:intron 35.0%
TCCAAAATTTGATGGAGTTG+AGG - chr8_4:55022038-55022057 Msa1334560:intron 35.0%
ACAGAAAGGCTATAAAGACA+TGG - chr8_4:55022064-55022083 Msa1334560:intron 35.0%
CAGAAAGGCTATAAAGACAT+GGG - chr8_4:55022065-55022084 Msa1334560:intron 35.0%
AGAAAGGCTATAAAGACATG+GGG - chr8_4:55022066-55022085 Msa1334560:intron 35.0%
CTATAAAGACATGGGGAAAA+TGG - chr8_4:55022073-55022092 Msa1334560:intron 35.0%
GATATTCTTCTGCTCATTTC+AGG - chr8_4:55022142-55022161 Msa1334560:intron 35.0%
AATAAACTGGAAAACGGACA+AGG + chr8_4:55022202-55022221 None:intergenic 35.0%
!! TTTCCAGTTTATTTCTACCG+AGG - chr8_4:55022209-55022228 Msa1334560:intron 35.0%
!! TTCCAGTTTATTTCTACCGA+GGG - chr8_4:55022210-55022229 Msa1334560:intron 35.0%
!! TTAGCCGTTCTAAAGTGAAA+GGG + chr8_4:55022460-55022479 None:intergenic 35.0%
!! TTTAGCCGTTCTAAAGTGAA+AGG + chr8_4:55022461-55022480 None:intergenic 35.0%
CCTATTCTCCATAATGATGT+TGG + chr8_4:55022513-55022532 None:intergenic 35.0%
CCAACATCATTATGGAGAAT+AGG - chr8_4:55022510-55022529 Msa1334560:intron 35.0%
CATTATGGAGAATAGGAAAG+TGG - chr8_4:55022517-55022536 Msa1334560:intron 35.0%
ACTTATGGAGCAATTAGTAG+TGG + chr8_4:55022655-55022674 None:intergenic 35.0%
CAAAGGATAGTTATTCAGGA+TGG + chr8_4:55022770-55022789 None:intergenic 35.0%
! TGAGCTAATTTATGCCACTT+TGG - chr8_4:55022987-55023006 Msa1334560:CDS 35.0%
TTAAAGAGTCCTTTCTTTGC+AGG - chr8_4:55023040-55023059 Msa1334560:CDS 35.0%
AAGTATACTCCTGCAAAGAA+AGG + chr8_4:55023052-55023071 None:intergenic 35.0%
GTGTTTCATTTCACCTGTAA+TGG - chr8_4:55023249-55023268 Msa1334560:CDS 35.0%
AATTCATGGGGTGGAAATTA+CGG + chr8_4:55023287-55023306 None:intergenic 35.0%
GATAAATTAACCAGGCTTTG+GGG - chr8_4:55023338-55023357 Msa1334560:CDS 35.0%
ATCTACTCCATTACGAGATT+AGG - chr8_4:55023478-55023497 Msa1334560:five_prime_UTR 35.0%
AGACATACCTAATCTCGTAA+TGG + chr8_4:55023488-55023507 None:intergenic 35.0%
CAGACATTAGCAAATAGAGA+AGG + chr8_4:55023556-55023575 None:intergenic 35.0%
CTAATCTACTACTGATGACC+AGG + chr8_4:55019008-55019027 None:intergenic 40.0%
GAACAATGCGAGGAAGAAAA+GGG + chr8_4:55019178-55019197 None:intergenic 40.0%
AGAACAATGCGAGGAAGAAA+AGG + chr8_4:55019179-55019198 None:intergenic 40.0%
TTGTGAGAAAGAACAATGCG+AGG + chr8_4:55019188-55019207 None:intergenic 40.0%
! GAGAGAGAGAAGGTATGATA+TGG + chr8_4:55019287-55019306 None:intergenic 40.0%
TTGAGGTTGAATGTCGGTAA+CGG + chr8_4:55019340-55019359 None:intergenic 40.0%
GTCTGTATTCGTAACAGCAA+CGG + chr8_4:55019415-55019434 None:intergenic 40.0%
!! TGATGCGATTCTAGCTTTGA+AGG - chr8_4:55019446-55019465 Msa1334560:three_prime_UTR 40.0%
ATACAATGGAACTTGGGTAG+AGG - chr8_4:55019479-55019498 Msa1334560:three_prime_UTR 40.0%
!! TTATTAAACGGTGTTACCGC+AGG - chr8_4:55019808-55019827 Msa1334560:CDS 40.0%
!! TTCAGGTTTATTTCTGCGAG+TGG - chr8_4:55019846-55019865 Msa1334560:intron 40.0%
TAGAGCCTTGAGTTCAATGT+TGG - chr8_4:55020026-55020045 Msa1334560:intron 40.0%
AGAGCCTTGAGTTCAATGTT+GGG - chr8_4:55020027-55020046 Msa1334560:intron 40.0%
AGCATTATGCAGAAAGTTGG+AGG - chr8_4:55020110-55020129 Msa1334560:intron 40.0%
! ATGTAAGCGCTGCATTATAG+AGG - chr8_4:55020197-55020216 Msa1334560:intron 40.0%
! TGTAAGCGCTGCATTATAGA+GGG - chr8_4:55020198-55020217 Msa1334560:intron 40.0%
CTGCATTATAGAGGGAAGAT+TGG - chr8_4:55020206-55020225 Msa1334560:intron 40.0%
ATGGGTTTGAGTATGATTCC+TGG + chr8_4:55020371-55020390 None:intergenic 40.0%
ACTAACAGCTGAGAAGCAAA+GGG + chr8_4:55020634-55020653 None:intergenic 40.0%
TACTAACAGCTGAGAAGCAA+AGG + chr8_4:55020635-55020654 None:intergenic 40.0%
TTACTGTAGGTTTAGTGCCA+AGG - chr8_4:55020707-55020726 Msa1334560:intron 40.0%
! GTTTAGTGCCAAGGACTTTT+TGG - chr8_4:55020716-55020735 Msa1334560:intron 40.0%
!! GACTTTTTGGCAAGACTGAA+AGG - chr8_4:55020729-55020748 Msa1334560:intron 40.0%
GGTAAACAACTAATGCTGGT+AGG - chr8_4:55020750-55020769 Msa1334560:intron 40.0%
! GAATGGACTCGAATTGGTTT+CGG + chr8_4:55020788-55020807 None:intergenic 40.0%
TTCACGAAGTACACACAGAA+TGG + chr8_4:55020805-55020824 None:intergenic 40.0%
ATTCTGTGTGTACTTCGTGA+AGG - chr8_4:55020804-55020823 Msa1334560:intron 40.0%
TGAGCAGGACTATGATTGTA+CGG - chr8_4:55021379-55021398 Msa1334560:intron 40.0%
TGAGATCTCATTTCCTTGTG+AGG - chr8_4:55021411-55021430 Msa1334560:intron 40.0%
GAGATCTCATTTCCTTGTGA+GGG - chr8_4:55021412-55021431 Msa1334560:intron 40.0%
GAGTTCGTATGAATGCACAA+GGG - chr8_4:55021438-55021457 Msa1334560:intron 40.0%
GAAAGACAAACCACATAGCA+GGG + chr8_4:55021896-55021915 None:intergenic 40.0%
TGAAAGACAAACCACATAGC+AGG + chr8_4:55021897-55021916 None:intergenic 40.0%
! GCCTCAACTCCATCAAATTT+TGG + chr8_4:55022042-55022061 None:intergenic 40.0%
AAGCAGATTGTCTACTATCG+TGG - chr8_4:55022120-55022139 Msa1334560:intron 40.0%
TTTACAAAATACGAGGCCCT+CGG + chr8_4:55022229-55022248 None:intergenic 40.0%
! TGCACCCTTTCACTTTAGAA+CGG - chr8_4:55022453-55022472 Msa1334560:intron 40.0%
! AGGATGGACCCATTTAAAAC+TGG + chr8_4:55022754-55022773 None:intergenic 40.0%
! ATAGTGGAAGAAGTGATCCT+GGG - chr8_4:55022799-55022818 Msa1334560:intron 40.0%
AAAGCTGACTAATTTCCGCA+AGG - chr8_4:55022855-55022874 Msa1334560:intron 40.0%
ATTAGCTCATTCCATGCATC+AGG + chr8_4:55022976-55022995 None:intergenic 40.0%
TGTCTGTTGCAAAACCAAAG+TGG + chr8_4:55023004-55023023 None:intergenic 40.0%
!! CAGGAGTATACTTTTTGTGC+AGG - chr8_4:55023059-55023078 Msa1334560:CDS 40.0%
CAACAGCTGATAGCATGATA+AGG - chr8_4:55023179-55023198 Msa1334560:CDS 40.0%
ATTCATGGGGTGGAAATTAC+GGG + chr8_4:55023286-55023305 None:intergenic 40.0%
CATTTGATGAATTCATGGGG+TGG + chr8_4:55023296-55023315 None:intergenic 40.0%
TAACCTTAACGTCTCTCCAT+CGG - chr8_4:55023413-55023432 Msa1334560:exon 40.0%
AATAGAGAAGGACAACAAGC+AGG + chr8_4:55023544-55023563 None:intergenic 40.0%
CTACTGATGACCAGGAATAG+AGG + chr8_4:55019000-55019019 None:intergenic 45.0%
GATCTTACACGTGAGATGCA+CGG + chr8_4:55019061-55019080 None:intergenic 45.0%
CGACAGTGTAACGGTTATTG+TGG + chr8_4:55019152-55019171 None:intergenic 45.0%
TGGAGATAGAGATCTGTGTG+AGG + chr8_4:55019267-55019286 None:intergenic 45.0%
ATTCAACCTCAACCCTCCAT+TGG - chr8_4:55019348-55019367 Msa1334560:three_prime_UTR 45.0%
ATGATCATCGACATCGACAG+TGG + chr8_4:55019379-55019398 None:intergenic 45.0%
TGCTGTTACGAATACAGACG+AGG - chr8_4:55019416-55019435 Msa1334560:three_prime_UTR 45.0%
TCAACGTAAGGACAAGAACC+TGG + chr8_4:55019528-55019547 None:intergenic 45.0%
CTCATTATACCAAATGGCGC+TGG - chr8_4:55019586-55019605 Msa1334560:CDS 45.0%
CTTGGAAGATCACATCCATG+AGG + chr8_4:55019615-55019634 None:intergenic 45.0%
CTCATGGATGTGATCTTCCA+AGG - chr8_4:55019613-55019632 Msa1334560:CDS 45.0%
!! AGGTTTATTTCTGCGAGTGG+AGG - chr8_4:55019849-55019868 Msa1334560:intron 45.0%
ATCAAATCGCGTTATTGCGC+TGG - chr8_4:55019905-55019924 Msa1334560:intron 45.0%
CAGTCTTGCCAAAAAGTCCT+TGG + chr8_4:55020727-55020746 None:intergenic 45.0%
! CACACAGAATGGACTCGAAT+TGG + chr8_4:55020794-55020813 None:intergenic 45.0%
ATCTCATTTCCTTGTGAGGG+AGG - chr8_4:55021415-55021434 Msa1334560:intron 45.0%
TCTCATTTCCTTGTGAGGGA+GGG - chr8_4:55021416-55021435 Msa1334560:intron 45.0%
GGAGTTCGTATGAATGCACA+AGG - chr8_4:55021437-55021456 Msa1334560:intron 45.0%
GACATTCTCGTCTTCAACAC+CGG - chr8_4:55021524-55021543 Msa1334560:intron 45.0%
ACATTCTCGTCTTCAACACC+GGG - chr8_4:55021525-55021544 Msa1334560:intron 45.0%
CTCATGGAAAAACTGCTCGA+GGG - chr8_4:55021558-55021577 Msa1334560:intron 45.0%
TGGAGTTGAGGCATACAGAA+AGG - chr8_4:55022050-55022069 Msa1334560:intron 45.0%
TGTCTGGAAATCAATGGCTG+AGG - chr8_4:55022322-55022341 Msa1334560:intron 45.0%
TGCTGCTGAATCTTTGACAG+AGG - chr8_4:55022685-55022704 Msa1334560:intron 45.0%
TGCTGAATCTTTGACAGAGG+TGG - chr8_4:55022688-55022707 Msa1334560:intron 45.0%
!! GATAGTGGAAGAAGTGATCC+TGG - chr8_4:55022798-55022817 Msa1334560:intron 45.0%
AGAAGTGATCCTGGGAATGA+AGG - chr8_4:55022807-55022826 Msa1334560:intron 45.0%
TAACTGGAACCTTCATTCCC+AGG + chr8_4:55022819-55022838 None:intergenic 45.0%
CTGACTAATTTCCGCAAGGA+TGG - chr8_4:55022859-55022878 Msa1334560:intron 45.0%
TGCTCTTGCCAAAGACAGAT+GGG + chr8_4:55022888-55022907 None:intergenic 45.0%
ATGCTCTTGCCAAAGACAGA+TGG + chr8_4:55022889-55022908 None:intergenic 45.0%
! GTCTTTGGCAAGAGCATAAC+AGG - chr8_4:55022892-55022911 Msa1334560:intron 45.0%
! TTTGGCAAGAGCATAACAGG+TGG - chr8_4:55022895-55022914 Msa1334560:intron 45.0%
GAAGGAAAGTCTCCATGAAG+CGG - chr8_4:55022917-55022936 Msa1334560:intron 45.0%
AGAAGGGCAGTTGAGTACAA+TGG - chr8_4:55023101-55023120 Msa1334560:CDS 45.0%
ACACGATCCTGCTGAATTCA+CGG + chr8_4:55023233-55023252 None:intergenic 45.0%
GGTGAGATCAAGACCATTAC+AGG + chr8_4:55023265-55023284 None:intergenic 45.0%
GTTGCTATGCGACCTGGATT+TGG + chr8_4:55019104-55019123 None:intergenic 50.0%
TTCTTCGTTGCTATGCGACC+TGG + chr8_4:55019110-55019129 None:intergenic 50.0%
AAAGGGTCGCGACAGTGTAA+CGG + chr8_4:55019161-55019180 None:intergenic 50.0%
AGATCTGTGTGAGGAGAGAG+AGG + chr8_4:55019258-55019277 None:intergenic 50.0%
! TTGAATGTCGGTAACGGTGG+TGG + chr8_4:55019334-55019353 None:intergenic 50.0%
! AGGTTGAATGTCGGTAACGG+TGG + chr8_4:55019337-55019356 None:intergenic 50.0%
GGAGGGTTGAGGTTGAATGT+CGG + chr8_4:55019346-55019365 None:intergenic 50.0%
ATGAGGTTTCCAGCGCCATT+TGG + chr8_4:55019598-55019617 None:intergenic 50.0%
! AAATGGCGCTGGAAACCTCA+TGG - chr8_4:55019597-55019616 Msa1334560:CDS 50.0%
ATCGAACTAAACGACGCCTG+CGG + chr8_4:55019827-55019846 None:intergenic 50.0%
! GGCGTCGTTTAGTTCGATTC+AGG - chr8_4:55019829-55019848 Msa1334560:CDS 50.0%
!! AGTTGGAGGAGCACTTGTGA+TGG - chr8_4:55020124-55020143 Msa1334560:intron 50.0%
GTGTGTACTTCGTGAAGGCT+TGG - chr8_4:55020809-55020828 Msa1334560:intron 50.0%
!!! AGATTTTGGAGCGCTTGAGC+AGG - chr8_4:55021364-55021383 Msa1334560:intron 50.0%
GCTCATGGAAAAACTGCTCG+AGG - chr8_4:55021557-55021576 Msa1334560:intron 50.0%
GGAAAAACTGCTCGAGGGTT+AGG - chr8_4:55021563-55021582 Msa1334560:intron 50.0%
GGCCCTCGGTAGAAATAAAC+TGG + chr8_4:55022215-55022234 None:intergenic 50.0%
TCTTTGACAGAGGTGGAGAC+TGG - chr8_4:55022695-55022714 Msa1334560:intron 50.0%
CTTTGACAGAGGTGGAGACT+GGG - chr8_4:55022696-55022715 Msa1334560:intron 50.0%
GATGGTCACCCATCTGTCTT+TGG - chr8_4:55022877-55022896 Msa1334560:intron 50.0%
! GCAAGAGCATAACAGGTGGA+AGG - chr8_4:55022899-55022918 Msa1334560:intron 50.0%
ACGATCCTGCTGAATTCACG+GGG + chr8_4:55023231-55023250 None:intergenic 50.0%
CACGATCCTGCTGAATTCAC+GGG + chr8_4:55023232-55023251 None:intergenic 50.0%
!! TTAACCAGGCTTTGGGGTGT+AGG - chr8_4:55023344-55023363 Msa1334560:CDS 50.0%
!! TAACCAGGCTTTGGGGTGTA+GGG - chr8_4:55023345-55023364 Msa1334560:CDS 50.0%
AGACCGATGGAGAGACGTTA+AGG + chr8_4:55023419-55023438 None:intergenic 50.0%
TGTGTGAGGAGAGAGAGGAG+TGG + chr8_4:55019253-55019272 None:intergenic 55.0%
!! ACGGTGGTGGAGGATTGTTG+CGG + chr8_4:55019321-55019340 None:intergenic 55.0%
! AATGTCGGTAACGGTGGTGG+AGG + chr8_4:55019331-55019350 None:intergenic 55.0%
CAACCTCAACCCTCCATTGG+CGG - chr8_4:55019351-55019370 Msa1334560:three_prime_UTR 55.0%
TACGAACTCCCTCCCTCACA+AGG + chr8_4:55021427-55021446 None:intergenic 55.0%
TTGACAAGACGTCCAACCGC+TGG - chr8_4:55021492-55021511 Msa1334560:intron 55.0%
GAATGTCAGCCCTCTTCCAG+CGG + chr8_4:55021511-55021530 None:intergenic 55.0%
GACTCAGGTGGGTCATGCTA+CGG - chr8_4:55022718-55022737 Msa1334560:intron 55.0%
CAGATGGGTGACCATCCTTG+CGG + chr8_4:55022873-55022892 None:intergenic 55.0%
GAAAGTCTCCATGAAGCGGC+AGG - chr8_4:55022921-55022940 Msa1334560:CDS 55.0%
! TGCAGCCATTGGTGTCTTCC+TGG - chr8_4:55022946-55022965 Msa1334560:CDS 55.0%
! GCAGCCATTGGTGTCTTCCT+GGG - chr8_4:55022947-55022966 Msa1334560:CDS 55.0%
! CAGCCATTGGTGTCTTCCTG+GGG - chr8_4:55022948-55022967 Msa1334560:CDS 55.0%
GTACCCCAGGAAGACACCAA+TGG + chr8_4:55022954-55022973 None:intergenic 55.0%
! TTCCTGGGGTACCTGATGCA+TGG - chr8_4:55022962-55022981 Msa1334560:CDS 55.0%
TTCCATGCATCAGGTACCCC+AGG + chr8_4:55022967-55022986 None:intergenic 55.0%
TTCCACCCCGTGAATTCAGC+AGG - chr8_4:55023223-55023242 Msa1334560:CDS 55.0%
ATCCTGCTGAATTCACGGGG+TGG + chr8_4:55023228-55023247 None:intergenic 55.0%
GTGTGCGAGAATGAGACCGA+TGG + chr8_4:55023432-55023451 None:intergenic 55.0%
! GAGGATTGTTGCGGTGGTGG+CGG + chr8_4:55019312-55019331 None:intergenic 60.0%
GTGGAGGATTGTTGCGGTGG+TGG + chr8_4:55019315-55019334 None:intergenic 60.0%
! GTGGTGGAGGATTGTTGCGG+TGG + chr8_4:55019318-55019337 None:intergenic 60.0%
ACAGTGGCACCGCCAATGGA+GGG + chr8_4:55019363-55019382 None:intergenic 60.0%
ATCGACAGTGGCACCGCCAA+TGG + chr8_4:55019367-55019386 None:intergenic 60.0%
AGACGTCCAACCGCTGGAAG+AGG - chr8_4:55021498-55021517 Msa1334560:intron 60.0%
GACGTCCAACCGCTGGAAGA+GGG - chr8_4:55021499-55021518 Msa1334560:intron 60.0%
TCGTCTTCAACACCGGGCAC+TGG - chr8_4:55021531-55021550 Msa1334560:intron 60.0%
!! TCTTCAACACCGGGCACTGG+TGG - chr8_4:55021534-55021553 Msa1334560:intron 60.0%
!! CTTCAACACCGGGCACTGGT+GGG - chr8_4:55021535-55021554 Msa1334560:intron 60.0%
AGAGGTGGAGACTGGGACTC+AGG - chr8_4:55022703-55022722 Msa1334560:intron 60.0%
GTGGAGACTGGGACTCAGGT+GGG - chr8_4:55022707-55022726 Msa1334560:intron 60.0%
GAACCCTACACCCCAAAGCC+TGG + chr8_4:55023351-55023370 None:intergenic 60.0%
!! GATTGTTGCGGTGGTGGCGG+CGG + chr8_4:55019309-55019328 None:intergenic 65.0%
GCACCGCCAATGGAGGGTTG+AGG + chr8_4:55019357-55019376 None:intergenic 65.0%
GACAGTGGCACCGCCAATGG+AGG + chr8_4:55019364-55019383 None:intergenic 65.0%
GTCAGCCCTCTTCCAGCGGT+TGG + chr8_4:55021507-55021526 None:intergenic 65.0%
TCCATGAGCCCACCAGTGCC+CGG + chr8_4:55021546-55021565 None:intergenic 65.0%
GGTGGAGACTGGGACTCAGG+TGG - chr8_4:55022706-55022725 Msa1334560:intron 65.0%
! GCTGCAGTCCTGCCGCTTCA+TGG + chr8_4:55022932-55022951 None:intergenic 65.0%
AGCGGCAGGACTGCAGCCAT+TGG - chr8_4:55022935-55022954 Msa1334560:CDS 65.0%
! GGTGGCGGCGGAGAGAGAGA+AGG + chr8_4:55019297-55019316 None:intergenic 70.0%
!! ACCGGGCACTGGTGGGCTCA+TGG - chr8_4:55021542-55021561 Msa1334560:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 55018959 55023596 55018959 ID=Msa1334560;Name=Msa1334560
chr8_4 mRNA 55018959 55023596 55018959 ID=Msa1334560-mRNA-1;Parent=Msa1334560;Name=Msa1334560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=182|1|1|1|1|1|5|558|457
chr8_4 exon 55018959 55019850 55018959 ID=Msa1334560-mRNA-1:exon:17157;Parent=Msa1334560-mRNA-1
chr8_4 exon 55020392 55020550 55020392 ID=Msa1334560-mRNA-1:exon:17156;Parent=Msa1334560-mRNA-1
chr8_4 exon 55020976 55021169 55020976 ID=Msa1334560-mRNA-1:exon:17155;Parent=Msa1334560-mRNA-1
chr8_4 exon 55021647 55021839 55021647 ID=Msa1334560-mRNA-1:exon:17154;Parent=Msa1334560-mRNA-1
chr8_4 exon 55022921 55023596 55022921 ID=Msa1334560-mRNA-1:exon:17153;Parent=Msa1334560-mRNA-1
chr8_4 five_prime_UTR 55023415 55023596 55023415 ID=Msa1334560-mRNA-1:five_prime_utr;Parent=Msa1334560-mRNA-1
chr8_4 CDS 55022921 55023414 55022921 ID=Msa1334560-mRNA-1:cds;Parent=Msa1334560-mRNA-1
chr8_4 CDS 55021647 55021839 55021647 ID=Msa1334560-mRNA-1:cds;Parent=Msa1334560-mRNA-1
chr8_4 CDS 55020976 55021169 55020976 ID=Msa1334560-mRNA-1:cds;Parent=Msa1334560-mRNA-1
chr8_4 CDS 55020392 55020550 55020392 ID=Msa1334560-mRNA-1:cds;Parent=Msa1334560-mRNA-1
chr8_4 CDS 55019517 55019850 55019517 ID=Msa1334560-mRNA-1:cds;Parent=Msa1334560-mRNA-1
chr8_4 three_prime_UTR 55018959 55019516 55018959 ID=Msa1334560-mRNA-1:three_prime_utr;Parent=Msa1334560-mRNA-1
Gene Sequence

>Msa1334560

ATGATTTTCCACAATAACCGTTACACTGTCGCGACCCTTTTCTTCCTCGCATTGTTCTTTCTCACAATTTTCTTCTATTCATTCTTCTTCTTCTTCTTCAACACAACAACCACTCCTCTCTCTCCTCACACAGATCTCTATCTCCATATCATACCTTCTCTCTCTCCGCCGCCACCACCGCAACAATCCTCCACCACCGTTACCGACATTCAACCTCAACCCTCCATTGGCGGTGCCACTGTCGATGTCGATGATCATGAATCTGTTGATTCCGTTGCTGTTACGAATACAGACGAGGTTGATGATGATGCGATTCTAGCTTTGAAGGAATGCGATTTATACAATGGAACTTGGGTAGAGGATGAAGATTATCCGATTTATGAACCAGGTTCTTGTCCTTACGTTGATGAAGCTTATGATTGCAAAATCAATGGAAGGAATGATACTCATTATACCAAATGGCGCTGGAAACCTCATGGATGTGATCTTCCAAGGTTTAGTGCCAAGGACTTTTTGGCAAGACTGAAAGGTAAACAACTAATGCTGGTAGGAGATTCTATGAACCGAAACCAATTCGAGTCCATTCTGTGTGTACTTCGTGAAGGCTTGGACAATAAGAGCAAAATGTATGAGATACATGGTCACACAATATCTAAAGGAAGAGGCTACTTTGTTTTCAAATTTGAGGACTATGATTGTACGGTGTCATTTGTGAGATCTCATTTCCTTGTGAGGGAGGGAGTTCGTATGAATGCACAAGGGAGTTCAAATCCTACATTGTCAATAGATCGGATTGACAAGACGTCCAACCGCTGGAAGAGGGCTGACATTCTCGTCTTCAACACCGGGCACTGGTGGGCTCATGGAAAAACTGCTCGAGGAATAAATTACTATAAAGAAGGTGATTATCTATATCCAAAATTTGATGGAGTTGAGGCATACAGAAAGGCTATAAAGACATGGGGAAAATGGATCGACAATAATATCAATCCAAAAAAGCAGATTGTCTACTATCGTGGATATTCTTCTGCTCATTTCAGAGGTGGAGACTGGGACTCAGGTGGGTCATGCTACGGTGAAACTGAACCAGTTTTAAATGGGTCCATCCTGAATAACTATCCTTTGAAAATGAAGATAGTGGAAGAAGTGATCCTGGGAATGAAGGTTCCAGTTAAATTACTAAATGTAACAAAGCTGACTAATTTCCGCAAGGATGGTCACCCATCTGTCTTTGGCAAGAGCATAACAGGTGGAAGGAAAGTCTCCATGAAGCGGCAGGACTGCAGCCATTGGTGTCTTCCTGGGGTACCTGATGCATGGAATGAGCTAATTTATGCCACTTTGGTTTTGCAACAGACAAATTCAAGGAATTGA
Protein sequence

>Msa1334560

MIFHNNRYTVATLFFLALFFLTIFFYSFFFFFFNTTTTPLSPHTDLYLHIIPSLSPPPPPQQSSTTVTDIQPQPSIGGATVDVDDHESVDSVAVTNTDEVDDDAILALKECDLYNGTWVEDEDYPIYEPGSCPYVDEAYDCKINGRNDTHYTKWRWKPHGCDLPRFSAKDFLARLKGKQLMLVGDSMNRNQFESILCVLREGLDNKSKMYEIHGHTISKGRGYFVFKFEDYDCTVSFVRSHFLVREGVRMNAQGSSNPTLSIDRIDKTSNRWKRADILVFNTGHWWAHGKTARGINYYKEGDYLYPKFDGVEAYRKAIKTWGKWIDNNINPKKQIVYYRGYSSAHFRGGDWDSGGSCYGETEPVLNGSILNNYPLKMKIVEEVILGMKVPVKLLNVTKLTNFRKDGHPSVFGKSITGGRKVSMKRQDCSHWCLPGVPDAWNELIYATLVLQQTNSRN*