AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0192050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0192050 MtrunA17_Chr2g0282161 99.099 555 5 0 1 555 1 555 0.0 1125
Msa0192050 MtrunA17_Chr5g0440381 32.163 541 350 5 1 533 5 536 1.47e-94 299
Msa0192050 MtrunA17_Chr3g0123341 33.461 523 332 9 9 524 18 531 2.26e-89 285
Msa0192050 MtrunA17_Chr8g0380331 30.697 531 347 8 13 527 13 538 1.11e-71 239
Msa0192050 MtrunA17_Chr1g0160221 29.063 523 345 12 24 538 29 533 8.99e-68 228
Msa0192050 MtrunA17_Chr6g0461541 28.755 546 361 12 1 538 5 530 3.46e-66 224
Msa0192050 MtrunA17_Chr7g0214841 26.966 534 348 10 22 532 20 534 5.73e-66 223
Msa0192050 MtrunA17_Chr7g0272821 29.848 526 347 11 7 524 6 517 2.14e-63 216
Msa0192050 MtrunA17_Chr7g0241881 29.167 528 348 10 7 524 6 517 1.00e-61 212
Msa0192050 MtrunA17_Chr3g0139481 31.061 264 174 4 267 524 212 473 9.32e-27 113
Msa0192050 MtrunA17_Chr3g0139481 36.301 146 93 0 20 165 25 170 9.93e-26 110
Msa0192050 MtrunA17_Chr4g0069951 27.758 281 174 6 168 429 406 676 3.02e-20 95.5
Msa0192050 MtrunA17_Chr8g0392171 26.797 306 176 8 192 485 2 271 7.20e-19 87.0
Msa0192050 MtrunA17_Chr4g0044341 25.769 260 170 6 168 414 409 658 2.22e-16 83.2
Msa0192050 MtrunA17_Chr8g0345151 27.854 219 134 6 228 430 473 683 3.88e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0192050 AT5G26360.1 89.550 555 58 0 1 555 1 555 0.0 1017
Msa0192050 AT3G11830.1 33.457 541 343 5 1 533 5 536 7.04e-95 300
Msa0192050 AT3G11830.2 33.272 541 342 6 1 533 5 534 3.17e-92 293
Msa0192050 AT1G24510.1 34.549 521 329 8 9 524 18 531 1.49e-90 288
Msa0192050 AT3G18190.1 31.418 522 342 9 10 524 22 534 2.01e-77 254
Msa0192050 AT1G24510.3 32.787 488 311 9 42 524 3 478 3.04e-76 249
Msa0192050 AT1G24510.2 32.900 462 298 8 68 524 1 455 2.67e-72 238
Msa0192050 AT3G20050.1 30.114 528 352 6 14 527 14 538 3.85e-71 238
Msa0192050 AT3G03960.1 27.778 522 353 11 24 538 32 536 6.82e-65 221
Msa0192050 AT5G20890.1 29.356 528 347 10 7 524 6 517 7.35e-62 213
Msa0192050 AT5G16070.1 25.497 553 371 8 4 534 2 535 7.95e-60 207
Msa0192050 AT3G02530.1 25.362 552 370 8 4 532 2 534 1.71e-59 206
Msa0192050 AT4G33240.4 27.046 281 176 6 168 429 396 666 1.54e-20 96.7
Msa0192050 AT4G33240.2 27.046 281 176 6 168 429 398 668 1.54e-20 96.7
Msa0192050 AT4G33240.6 27.046 281 176 6 168 429 399 669 1.58e-20 96.7
Msa0192050 AT4G33240.1 27.046 281 176 6 168 429 399 669 1.58e-20 96.7
Msa0192050 AT4G33240.7 27.046 281 176 6 168 429 399 669 1.58e-20 96.7
Msa0192050 AT4G33240.5 27.046 281 176 6 168 429 399 669 1.64e-20 96.7
Msa0192050 AT4G33240.3 27.046 281 176 6 168 429 399 669 1.75e-20 96.7
Msa0192050 AT3G14270.2 26.335 281 179 7 168 430 411 681 2.18e-17 86.7
Msa0192050 AT3G14270.1 26.335 281 179 7 168 430 411 681 2.18e-17 86.7
Msa0192050 AT1G71010.1 23.954 263 177 5 165 414 352 604 2.00e-16 83.6

Find 166 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTATTCTTAAGAAATTT+TGG 0.088730 2_1:-7788676 Msa0192050:three_prime_UTR
ACCAAATTCACAAGTCAATT+TGG 0.107359 2_1:-7791749 Msa0192050:CDS
CCCAAATTGACTTGTGAATT+TGG 0.111350 2_1:+7791748 None:intergenic
AAGCTTGTACTGTATTATTA+AGG 0.193579 2_1:-7789853 Msa0192050:CDS
TGTTCAAGTGTCATGCTTTA+TGG 0.197536 2_1:-7788587 Msa0192050:three_prime_UTR
TTATTTGAAGTTAAGAAAAT+TGG 0.228729 2_1:-7789917 Msa0192050:CDS
CTGAGGACTGCATGATTTCT+AGG 0.231010 2_1:+7794741 None:intergenic
CCACCTCCAGGAACAAGTTT+TGG 0.245793 2_1:+7789670 None:intergenic
AGTTTGTGCCTTCACATTAT+AGG 0.249274 2_1:+7788931 None:intergenic
TTGCCCTCTTGAGTATAAAA+AGG 0.258332 2_1:-7790236 Msa0192050:CDS
AAGCTGCATGCATGCTTCTA+AGG 0.263661 2_1:-7788892 Msa0192050:CDS
AGATACTTTGGTTCTGGATT+TGG 0.264897 2_1:-7794800 Msa0192050:five_prime_UTR
GGCTTTGAAGGGCCTGCTCC+AGG 0.267217 2_1:+7788830 None:intergenic
CCAAATTCACAAGTCAATTT+GGG 0.281512 2_1:-7791748 Msa0192050:CDS
TCTGATGTCGGTACTGGTGC+TGG 0.297029 2_1:-7789941 Msa0192050:CDS
AGAAGAAGATACTTTGGTTC+TGG 0.305393 2_1:-7794806 Msa0192050:five_prime_UTR
TCACCGACACAAGGCATAAA+AGG 0.316749 2_1:+7788434 None:intergenic
AAGATGCTTCTTGATGCTTC+TGG 0.319424 2_1:-7793451 Msa0192050:CDS
AGAGAAGGGTCTTAGTGATT+TGG 0.323297 2_1:-7790086 Msa0192050:CDS
AAACTTGATATGCGATTATA+TGG 0.328901 2_1:-7788412 Msa0192050:three_prime_UTR
ATCTCCGACTTCTTCGTCTT+GGG 0.330557 2_1:+7792632 None:intergenic
TGAAGTTGGGAGGTGGTTAA+AGG 0.330730 2_1:+7795007 None:intergenic
TTTCAGAACATACATCGTTC+TGG 0.333868 2_1:-7788476 Msa0192050:three_prime_UTR
CTCCATGCTTGCTCAGATAA+TGG 0.339131 2_1:+7790059 None:intergenic
CATCTCCGACTTCTTCGTCT+TGG 0.342454 2_1:+7792631 None:intergenic
CACCGCATGCCTTGGCAATT+CGG 0.351778 2_1:+7789999 None:intergenic
AAGGAGGAGGAGGCGGCGTT+AGG 0.354666 2_1:+7795026 None:intergenic
GTCTCAATCTTAGGCTTTGA+AGG 0.361612 2_1:+7788818 None:intergenic
ACAGTGTTCCATTCATTTCC+AGG 0.362739 2_1:-7795119 Msa0192050:five_prime_UTR
GACTCTTTGAAACGTGAGTC+TGG 0.365350 2_1:-7793663 Msa0192050:CDS
ACAACAGTGGGTGTTGATAT+TGG 0.375171 2_1:-7790427 Msa0192050:CDS
AATAATACAGTACAAGCTTT+GGG 0.376013 2_1:+7789857 None:intergenic
ACCACATCTGTCATCATTCT+TGG 0.376651 2_1:-7792606 Msa0192050:intron
AGGAGGAGGAGGCGGCGTTA+GGG 0.378043 2_1:+7795027 None:intergenic
TAATAATACAGTACAAGCTT+TGG 0.380733 2_1:+7789856 None:intergenic
TTTAACCACCTCCCAACTTC+AGG 0.380930 2_1:-7795005 Msa0192050:intron
GCTTTGAAGGGCCTGCTCCA+GGG 0.381395 2_1:+7788831 None:intergenic
ATCTTTCTCCTCATCTTGCC+AGG 0.386648 2_1:+7790286 None:intergenic
AAGAAGCAGGCCCCTGGAGC+AGG 0.394021 2_1:-7788842 Msa0192050:CDS
TCTCCCTCGGTCTCAATCTT+AGG 0.395252 2_1:+7788809 None:intergenic
TAAGAAGTTCAGCATTTGTT+TGG 0.396948 2_1:+7790206 None:intergenic
AATGCATGGATTGGCATTGA+TGG 0.400045 2_1:-7789256 Msa0192050:CDS
TGCAGCATATAACAAAGCTT+TGG 0.404233 2_1:-7792150 Msa0192050:intron
AGCTTGTACTGTATTATTAA+GGG 0.412154 2_1:-7789852 Msa0192050:CDS
CTTGTAGTGCGGTCATTGTC+CGG 0.414199 2_1:+7789383 None:intergenic
GAATCCTCAAGCTGCGCACC+AGG 0.416463 2_1:+7790352 None:intergenic
CTGGAGTCTCTTGTTGAAGT+TGG 0.416658 2_1:-7790173 Msa0192050:CDS
ATTATTAAGGGGTGCTAGTA+AGG 0.424390 2_1:-7789840 Msa0192050:CDS
GAACAGACCAGATGAGTTGC+AGG 0.428469 2_1:-7789966 Msa0192050:CDS
GATATAATTCGTACAACATT+GGG 0.434382 2_1:-7793490 Msa0192050:CDS
TTCTCTGTAACAACCAAGTC+TGG 0.436296 2_1:+7790103 None:intergenic
TGAAAATTATAGCATGCAAA+TGG 0.436575 2_1:-7789283 Msa0192050:intron
TGAATCTATTCCACGTACTT+TGG 0.438051 2_1:-7789431 Msa0192050:CDS
CTCGCCGTCGGCATCTCCCT+CGG 0.440258 2_1:+7788796 None:intergenic
CTTTGAAGGGCCTGCTCCAG+GGG 0.441053 2_1:+7788832 None:intergenic
TCAGACTCCTGCAACTCATC+TGG 0.446459 2_1:+7789959 None:intergenic
GCAATGGCAGCAGCTTCATA+TGG 0.448185 2_1:+7789457 None:intergenic
AACAAAGATGTGGTTGCCCC+TGG 0.456951 2_1:-7790304 Msa0192050:CDS
GAATAATTAAATACTTAAAG+AGG 0.457173 2_1:+7788690 None:intergenic
TTCAGAACATACATCGTTCT+GGG 0.461999 2_1:-7788475 Msa0192050:three_prime_UTR
GCTTTAAGAAGAAGATACTT+TGG 0.463826 2_1:-7794812 Msa0192050:five_prime_UTR
GTTCTTGTCAATGAAAGCTT+CGG 0.464365 2_1:+7792275 None:intergenic
TTACGGTCTTGAGCATCAAT+AGG 0.467143 2_1:+7792092 None:intergenic
AATGCAGGAGGACAAATGTT+GGG 0.467727 2_1:-7791794 Msa0192050:intron
GTGGTTAAAGGAGGAGGAGG+CGG 0.469687 2_1:+7795019 None:intergenic
TGAAAACAAGCAACTCTCAA+TGG 0.474330 2_1:+7788509 None:intergenic
CCAAAACTTGTTCCTGGAGG+TGG 0.476990 2_1:-7789670 Msa0192050:CDS
GCGTAGAAGTTACCTGAAGT+TGG 0.478067 2_1:+7794993 None:intergenic
AAGCATGCATGCAGCTTCAA+TGG 0.478250 2_1:+7788898 None:intergenic
TGGGAGGTGGTTAAAGGAGG+AGG 0.480754 2_1:+7795013 None:intergenic
CAGTGTTCCATTCATTTCCA+GGG 0.482579 2_1:-7795118 Msa0192050:five_prime_UTR
CAGGAGTCTGATGTCGGTAC+TGG 0.489559 2_1:-7789947 Msa0192050:CDS
ATCAAGAAGAAGCAGGCCCC+TGG 0.492359 2_1:-7788848 Msa0192050:CDS
CGTAGAAGTTACCTGAAGTT+GGG 0.492520 2_1:+7794994 None:intergenic
TGATATAATTCGTACAACAT+TGG 0.494523 2_1:-7793491 Msa0192050:CDS
CGAGTGAGTAACAGAGAGAA+AGG 0.498095 2_1:+7795062 None:intergenic
GAGGTGGTTAAAGGAGGAGG+AGG 0.498153 2_1:+7795016 None:intergenic
TGAGGATTCGAGAGTTCTCA+AGG 0.501299 2_1:-7790338 Msa0192050:CDS
TAGAAAACCCTGGAAATGAA+TGG 0.510330 2_1:+7795111 None:intergenic
AGAGGATCACCTTTGACGCC+TGG 0.511277 2_1:+7793616 None:intergenic
GAGTCTCTTGTTGAAGTTGG+AGG 0.512986 2_1:-7790170 Msa0192050:CDS
AGCATATAACAAAGCTTTGG+AGG 0.514704 2_1:-7792147 Msa0192050:CDS
ATTGGCATTGATGGAAATAC+TGG 0.514728 2_1:-7789247 Msa0192050:CDS
CGTACTTTGGCACAAAATTG+TGG 0.516524 2_1:-7789418 Msa0192050:CDS
ATAAAACATCAGCACAATCA+AGG 0.520322 2_1:+7788651 None:intergenic
ATTGTGGAGTAAACGTCATC+CGG 0.520410 2_1:-7789402 Msa0192050:CDS
GACTTGGTTGTTACAGAGAA+GGG 0.522462 2_1:-7790100 Msa0192050:CDS
CTGATGTCGGTACTGGTGCT+GGG 0.526357 2_1:-7789940 Msa0192050:CDS
TGAGGACTGCATGATTTCTA+GGG 0.527998 2_1:+7794742 None:intergenic
AACTTCTTAAAGAAGAAGAC+TGG 0.529976 2_1:-7790192 Msa0192050:CDS
CGGACAATGACCGCACTACA+AGG 0.532946 2_1:-7789382 Msa0192050:CDS
TGAGGTTGAAAGAAACCTAC+AGG 0.532972 2_1:-7789807 Msa0192050:intron
AAGCATCTTTAGCATGGACC+TGG 0.533448 2_1:+7793465 None:intergenic
GAGACAAGTACCTTGGCAGC+TGG 0.535922 2_1:+7792846 None:intergenic
TCTTTCTCCTCATCTTGCCA+GGG 0.536384 2_1:+7790287 None:intergenic
AAATGCAGGAGGACAAATGT+TGG 0.537076 2_1:-7791795 Msa0192050:intron
GGTGCATCATGCTAATATCC+AGG 0.537436 2_1:-7793634 Msa0192050:CDS
ATCTCTGTAGCACCACCTCC+AGG 0.539267 2_1:+7789658 None:intergenic
CAATGAAAGCTTCGGCAACA+TGG 0.540939 2_1:+7792283 None:intergenic
GGTCCCTGGTGCGCAGCTTG+AGG 0.544252 2_1:-7790356 Msa0192050:CDS
GTAAACTACAACAGGAATTG+TGG 0.545065 2_1:-7792916 Msa0192050:intron
AGTTGGGAGGTGGTTAAAGG+AGG 0.547736 2_1:+7795010 None:intergenic
ATCAAGGTTGAGAAGGTCCC+TGG 0.551852 2_1:-7790370 Msa0192050:CDS
TGCTAATATCCAGGCGTCAA+AGG 0.552854 2_1:-7793625 Msa0192050:intron
ATTGAAGTTTAAACCAGACT+TGG 0.553489 2_1:-7790116 Msa0192050:CDS
GAGTGGAATCAAGAAGAAGC+AGG 0.556687 2_1:-7788855 Msa0192050:CDS
TGGAATAGATTCAAAAGCAA+TGG 0.561218 2_1:+7789441 None:intergenic
TATCTACATCTCTTAAACCA+TGG 0.561631 2_1:+7790404 None:intergenic
CAAATTCACAAGTCAATTTG+GGG 0.565801 2_1:-7791747 Msa0192050:CDS
AAATTATATCAAGGTTGAGA+AGG 0.566760 2_1:-7790377 Msa0192050:CDS
TATTGCTCATCCAGCTGCCA+AGG 0.569445 2_1:-7792856 Msa0192050:intron
TGCCATTATCTGAGCAAGCA+TGG 0.569972 2_1:-7790061 Msa0192050:CDS
AATGGAGAAAATGCATGGAT+TGG 0.569974 2_1:-7789265 Msa0192050:CDS
CAGAAGAGTTCTTCTATCGA+AGG 0.570379 2_1:-7789613 Msa0192050:CDS
TTCGTACAACATTGGGACCC+AGG 0.571407 2_1:-7793483 Msa0192050:CDS
TCTCAATCTTAGGCTTTGAA+GGG 0.572066 2_1:+7788819 None:intergenic
AATAACAGCACCGCATGCCT+TGG 0.573559 2_1:+7789991 None:intergenic
CAAGACGAAGAAGTCGGAGA+TGG 0.577173 2_1:-7792630 Msa0192050:CDS
AGACTTGGTTGTTACAGAGA+AGG 0.577254 2_1:-7790101 Msa0192050:CDS
GTGGGTGTTGATATTGGCCA+TGG 0.577458 2_1:-7790421 Msa0192050:CDS
TGGAAGGATTTGCTCGCCGT+CGG 0.584192 2_1:+7788784 None:intergenic
TTGCTTAAACAAACAGTACC+AGG 0.586765 2_1:+7788627 None:intergenic
GCTTGTACTGTATTATTAAG+GGG 0.588332 2_1:-7789851 Msa0192050:CDS
AGTAATGTTTAACAAAGATG+TGG 0.589801 2_1:-7790314 Msa0192050:CDS
AGTTACCTGAAGTTGGGAGG+TGG 0.593806 2_1:+7795000 None:intergenic
TTCTATCGAAGGCATTGAGA+AGG 0.594600 2_1:-7789602 Msa0192050:intron
CATCCTACAGTTATTTGCCG+AGG 0.596745 2_1:-7792249 Msa0192050:intron
AATCCTCAAGCTGCGCACCA+GGG 0.598531 2_1:+7790353 None:intergenic
TATTGATGCTACTACAACAG+TGG 0.599428 2_1:-7790440 Msa0192050:CDS
ATCAAGAAGCATCTTTAGCA+TGG 0.599778 2_1:+7793459 None:intergenic
GAAACGTGAGTCTGGAGCAA+AGG 0.599966 2_1:-7793655 Msa0192050:CDS
TGCTGACATGAAAGAGCGCA+AGG 0.603461 2_1:-7789218 Msa0192050:intron
TGATAATAACCGAATTGCCA+AGG 0.604859 2_1:-7790008 Msa0192050:CDS
ATGCTTCTTGATGCTTCTGG+AGG 0.606288 2_1:-7793448 Msa0192050:intron
AGGATTGATGATATAGTGAG+TGG 0.606903 2_1:-7788872 Msa0192050:CDS
GAAAACAAACAGTTTCAGCC+TGG 0.607018 2_1:+7788533 None:intergenic
AACCGAATTGCCAAGGCATG+CGG 0.607588 2_1:-7790001 Msa0192050:CDS
ATGCAAATGGAGAAAATGCA+TGG 0.610848 2_1:-7789270 Msa0192050:CDS
CTTACTGAGAACTACAACTG+AGG 0.611153 2_1:+7794724 None:intergenic
TAGTAAGGATCTCTTGAATG+AGG 0.616230 2_1:-7789825 Msa0192050:CDS
CTTTCTCCTCATCTTGCCAG+GGG 0.618134 2_1:+7790288 None:intergenic
TTACCTCGGCAAATAACTGT+AGG 0.621545 2_1:+7792246 None:intergenic
CTGGGATGCCTATAATGTGA+AGG 0.622790 2_1:-7788939 Msa0192050:CDS
AGGATGCCATGTCTGTTGCT+AGG 0.623139 2_1:-7789708 Msa0192050:CDS
ATGCAGGAGGACAAATGTTG+GGG 0.628171 2_1:-7791793 Msa0192050:intron
CTGGGTAAATGCGATTACGC+AGG 0.637515 2_1:-7788457 Msa0192050:three_prime_UTR
AAGCCTAAGATTGAGACCGA+GGG 0.639435 2_1:-7788812 Msa0192050:CDS
AAAGCCTAAGATTGAGACCG+AGG 0.639722 2_1:-7788813 Msa0192050:CDS
GGAATTGTGGTAACAAACGA+TGG 0.639749 2_1:-7792903 Msa0192050:CDS
AGCATCTTTAGCATGGACCT+GGG 0.641425 2_1:+7793466 None:intergenic
GAGACCGAGGGAGATGCCGA+CGG 0.648360 2_1:-7788800 Msa0192050:CDS
TATCAAGTTTCACCGACACA+AGG 0.650310 2_1:+7788425 None:intergenic
GTTGGAGGAAGAATACATTG+AGG 0.653847 2_1:-7790155 Msa0192050:CDS
GAGTTGCAGGAGTCTGATGT+CGG 0.655712 2_1:-7789953 Msa0192050:CDS
ATTGATGCTACTACAACAGT+GGG 0.658789 2_1:-7790439 Msa0192050:CDS
TATGTTCCTAGCAACAGACA+TGG 0.662859 2_1:+7789702 None:intergenic
CAAAATGAACTAGAAAACCC+TGG 0.664601 2_1:+7795101 None:intergenic
ACCAAGAATGATGACAGATG+TGG 0.671414 2_1:+7792605 None:intergenic
AATCCAAAACTTGTTCCTGG+AGG 0.673753 2_1:-7789673 Msa0192050:CDS
AGAAGTTACCTGAAGTTGGG+AGG 0.674421 2_1:+7794997 None:intergenic
TGGTTGCCCCTGGCAAGATG+AGG 0.674881 2_1:-7790294 Msa0192050:CDS
CAATCAAGAAGAATGATACG+TGG 0.679875 2_1:+7790256 None:intergenic
CGCACCCAAGACGAAGAAGT+CGG 0.680075 2_1:-7792636 Msa0192050:CDS
GAGGATTCGAGAGTTCTCAA+GGG 0.691262 2_1:-7790337 Msa0192050:CDS
AATCAAGAAGAATGATACGT+GGG 0.699347 2_1:+7790257 None:intergenic
TTAGTGCAATCAGAAGACTG+AGG 0.785980 2_1:-7790036 Msa0192050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATTTTCAAACATTTT+AGG - chr2_1:7791869-7791888 Msa0192050:intron 10.0%
!! TTTAAATATAATTCAATAGT+AGG + chr2_1:7793039-7793058 None:intergenic 10.0%
!! AGATATTAAAAATTATATCA+AGG - chr2_1:7793145-7793164 Msa0192050:intron 10.0%
!!! TAATTATTCTTAAGAAATTT+TGG - chr2_1:7794855-7794874 Msa0192050:intron 10.0%
!!! AATTATTCTTAAGAAATTTT+GGG - chr2_1:7794856-7794875 Msa0192050:intron 10.0%
!!! TTGAAAATGATTTTAAACAT+AGG - chr2_1:7789553-7789572 Msa0192050:intron 15.0%
!!! ACAACGTTAAATTTTTTTTT+AGG + chr2_1:7789594-7789613 None:intergenic 15.0%
!!! TAGATTATTCTTTTAAAATG+TGG + chr2_1:7789662-7789681 None:intergenic 15.0%
!! TGTTTAACATCAATATATAT+AGG + chr2_1:7790964-7790983 None:intergenic 15.0%
!!! TTTTTTTTTGCTTATAACTT+GGG + chr2_1:7792078-7792097 None:intergenic 15.0%
!!! TTTTTTTTTTGCTTATAACT+TGG + chr2_1:7792079-7792098 None:intergenic 15.0%
!!! AAAGTTTTTTGCTTATAATT+TGG - chr2_1:7792444-7792463 Msa0192050:intron 15.0%
!!! AAGTTTTTTGCTTATAATTT+GGG - chr2_1:7792445-7792464 Msa0192050:intron 15.0%
!!! TTAGGAAATAAAACTATTTT+AGG - chr2_1:7792568-7792587 Msa0192050:intron 15.0%
!!! TTATTTGAAGTTAAGAAAAT+TGG - chr2_1:7793614-7793633 Msa0192050:intron 15.0%
!! GAATAATTAAATACTTAAAG+AGG + chr2_1:7794844-7794863 None:intergenic 15.0%
!!! ATTTTATTACCAAATGATTC+TGG + chr2_1:7789485-7789504 None:intergenic 20.0%
!! TCTAATGTGAAAACAAAATA+TGG + chr2_1:7789514-7789533 None:intergenic 20.0%
!!! AAATGATTTTAAACATAGGT+TGG - chr2_1:7789557-7789576 Msa0192050:intron 20.0%
!!! TCAATTTTAACTTTGTACAT+GGG + chr2_1:7789707-7789726 None:intergenic 20.0%
!!! TAAGCATAGCTTTTTAAATA+TGG - chr2_1:7789809-7789828 Msa0192050:CDS 20.0%
!!! TTGTTGTTTCTAATTTAATG+TGG - chr2_1:7789992-7790011 Msa0192050:CDS 20.0%
!!! TTGTTTTCTTAAATTACTAC+AGG + chr2_1:7790171-7790190 None:intergenic 20.0%
!! AATAAGAAAATATTTAGCCT+CGG + chr2_1:7790386-7790405 None:intergenic 20.0%
!!! TGGTAATTTTTATAAGAGTT+TGG - chr2_1:7790456-7790475 Msa0192050:intron 20.0%
!! TGATAGGAAAAAAAAACTTA+CGG + chr2_1:7791459-7791478 None:intergenic 20.0%
!!! TTTTTTTTTCCTATCAAGAT+TGG - chr2_1:7791463-7791482 Msa0192050:intron 20.0%
!! TTCTATATTCCGATTATTTA+TGG - chr2_1:7791549-7791568 Msa0192050:intron 20.0%
!!! TTTTTGTTAATCAATGCAAT+TGG - chr2_1:7791967-7791986 Msa0192050:intron 20.0%
!!! GGAAATAAAACTATTTTGTT+TGG + chr2_1:7792157-7792176 None:intergenic 20.0%
!! TTGGAACAACAAATTTAAAT+TGG - chr2_1:7792413-7792432 Msa0192050:intron 20.0%
!!! TTTTTGCTTATAATTTGAGA+CGG - chr2_1:7792482-7792501 Msa0192050:intron 20.0%
!!! ATTTGTTTTGATTTTCAATG+TGG - chr2_1:7792520-7792539 Msa0192050:intron 20.0%
!! TTATTTATACACTATTAGCT+AGG + chr2_1:7792636-7792655 None:intergenic 20.0%
!! CTTATAGTAGCATTAAATTT+GGG + chr2_1:7792783-7792802 None:intergenic 20.0%
!! ACTTATAGTAGCATTAAATT+TGG + chr2_1:7792784-7792803 None:intergenic 20.0%
!! ATATAATTCAATAGTAGGAA+AGG + chr2_1:7793034-7793053 None:intergenic 20.0%
!!! AAATAATGATGGATAGTTTT+CGG + chr2_1:7794384-7794403 None:intergenic 20.0%
!! TAAAAATAAATGGATAACGA+AGG + chr2_1:7794432-7794451 None:intergenic 20.0%
!!! TATCCATTTATTTTTAAACG+AGG - chr2_1:7794436-7794455 Msa0192050:intron 20.0%
!!! TCTGATAATGTTTTGTATTA+TGG - chr2_1:7794562-7794581 Msa0192050:intron 20.0%
!!! CTGATAATGTTTTGTATTAT+GGG - chr2_1:7794563-7794582 Msa0192050:intron 20.0%
! AAATGAAAACACTTTCAGAT+CGG + chr2_1:7788570-7788589 None:intergenic 25.0%
!! AAATCGAAAGTGTAAAAGAA+GGG + chr2_1:7788652-7788671 None:intergenic 25.0%
!! AAAATCGAAAGTGTAAAAGA+AGG + chr2_1:7788653-7788672 None:intergenic 25.0%
!!! TTTTTGTTCTAAATGACTCA+TGG - chr2_1:7788856-7788875 Msa0192050:CDS 25.0%
!!! GATTTCGAATGTATTGATTA+TGG - chr2_1:7788981-7789000 Msa0192050:intron 25.0%
!!! TTGTGTATTGGTTTATGTTT+TGG - chr2_1:7789280-7789299 Msa0192050:intron 25.0%
! AAATGTGGACAGATATAAAA+TGG + chr2_1:7789647-7789666 None:intergenic 25.0%
!!! CTCAATTTTAACTTTGTACA+TGG + chr2_1:7789708-7789727 None:intergenic 25.0%
! GAATGTTGTTAGAAAATAAG+CGG - chr2_1:7789727-7789746 Msa0192050:intron 25.0%
! AATGTTGTTAGAAAATAAGC+GGG - chr2_1:7789728-7789747 Msa0192050:intron 25.0%
!! ATAGCTTTTTAAATATGGAG+TGG - chr2_1:7789814-7789833 Msa0192050:CDS 25.0%
! TGATATAATTCGTACAACAT+TGG - chr2_1:7790040-7790059 Msa0192050:CDS 25.0%
! GATATAATTCGTACAACATT+GGG - chr2_1:7790041-7790060 Msa0192050:CDS 25.0%
! TAACATCATATGTAAGTTGT+AGG - chr2_1:7790495-7790514 Msa0192050:intron 25.0%
! AGTTTACAGGAAAAAAGAAT+AGG + chr2_1:7790602-7790621 None:intergenic 25.0%
!! ATTTTATTGATATTGCTTCG+TGG - chr2_1:7790717-7790736 Msa0192050:intron 25.0%
!! ATTACTGATGTTATTTGTGT+GGG + chr2_1:7790993-7791012 None:intergenic 25.0%
!! AATTACTGATGTTATTTGTG+TGG + chr2_1:7790994-7791013 None:intergenic 25.0%
! AGGAGAATTTAAATTACTAC+GGG + chr2_1:7791038-7791057 None:intergenic 25.0%
! GAGGAGAATTTAAATTACTA+CGG + chr2_1:7791039-7791058 None:intergenic 25.0%
! ATGTGTTGTCATATACTAAA+TGG - chr2_1:7791143-7791162 Msa0192050:intron 25.0%
! ATTAATACGATACATTACCT+CGG + chr2_1:7791302-7791321 None:intergenic 25.0%
! TAATGTATCGTATTAATCAG+CGG - chr2_1:7791305-7791324 Msa0192050:intron 25.0%
!! GTACACAATTTTATACTGTA+AGG + chr2_1:7791337-7791356 None:intergenic 25.0%
! AAAAATGTACCAATCTTGAT+AGG + chr2_1:7791475-7791494 None:intergenic 25.0%
! TATATTCCGATTATTTATGG+AGG - chr2_1:7791552-7791571 Msa0192050:intron 25.0%
! TATGTCAAGAAGAAATTCAA+AGG + chr2_1:7791691-7791710 None:intergenic 25.0%
! TTTCGTTCATCAATAGAATT+GGG + chr2_1:7791718-7791737 None:intergenic 25.0%
!! TTTTCGTTCATCAATAGAAT+TGG + chr2_1:7791719-7791738 None:intergenic 25.0%
! TGAGCAAAGAATATCATATT+TGG + chr2_1:7791849-7791868 None:intergenic 25.0%
!!! TTTTAGGTTGATGTTTAACT+TGG - chr2_1:7791885-7791904 Msa0192050:intron 25.0%
! ATTGGTTATTATTCATGTGA+TGG - chr2_1:7791985-7792004 Msa0192050:intron 25.0%
! ATTATTCATGTGATGGTTAT+TGG - chr2_1:7791992-7792011 Msa0192050:intron 25.0%
! AATACTATGAAGGGTAATTT+AGG + chr2_1:7792550-7792569 None:intergenic 25.0%
!!! AGTTGTTTTGATTTTCAATG+TGG + chr2_1:7792208-7792227 None:intergenic 25.0%
! AATACTATGAAGGGTAATTT+AGG - chr2_1:7792550-7792569 Msa0192050:intron 25.0%
! TAAAGCAGTTGAATTGAAAA+AGG + chr2_1:7792605-7792624 None:intergenic 25.0%
! TGAACAGGACTAAAATTTAA+TGG - chr2_1:7792705-7792724 Msa0192050:intron 25.0%
! GAACAGGACTAAAATTTAAT+GGG - chr2_1:7792706-7792725 Msa0192050:intron 25.0%
! CATTCACTATTGTTAAATGA+TGG - chr2_1:7792850-7792869 Msa0192050:intron 25.0%
! AAATTATATCAAGGTTGAGA+AGG - chr2_1:7793154-7793173 Msa0192050:intron 25.0%
! AGTAATGTTTAACAAAGATG+TGG - chr2_1:7793217-7793236 Msa0192050:intron 25.0%
! AATAATACAGTACAAGCTTT+GGG + chr2_1:7793677-7793696 None:intergenic 25.0%
! TAATAATACAGTACAAGCTT+TGG + chr2_1:7793678-7793697 None:intergenic 25.0%
! AAGCTTGTACTGTATTATTA+AGG - chr2_1:7793678-7793697 Msa0192050:intron 25.0%
! AGCTTGTACTGTATTATTAA+GGG - chr2_1:7793679-7793698 Msa0192050:intron 25.0%
! AATATCAATAACTAACCTGT+AGG + chr2_1:7793742-7793761 None:intergenic 25.0%
!!! TCCTAACTTTTAATTCATTC+TGG - chr2_1:7794018-7794037 Msa0192050:intron 25.0%
! ACCAGAATGAATTAAAAGTT+AGG + chr2_1:7794022-7794041 None:intergenic 25.0%
!! TAATTCTTGTTGATTATCAG+TGG - chr2_1:7794051-7794070 Msa0192050:intron 25.0%
! TGAAAATTATAGCATGCAAA+TGG - chr2_1:7794248-7794267 Msa0192050:intron 25.0%
! TTGCCTCGTTTAAAAATAAA+TGG + chr2_1:7794442-7794461 None:intergenic 25.0%
! AAACTTGATATGCGATTATA+TGG - chr2_1:7795119-7795138 Msa0192050:five_prime_UTR 25.0%
!! GCTTTAAGAAGAAGATACTT+TGG - chr2_1:7788719-7788738 Msa0192050:three_prime_UTR 30.0%
AAAAAAAGCTAACGCGTAAA+GGG + chr2_1:7788841-7788860 None:intergenic 30.0%
ATACATAAAACCAGTTCACT+CGG + chr2_1:7788936-7788955 None:intergenic 30.0%
!!! GAACTGGTTTTATGTATGTT+TGG - chr2_1:7788939-7788958 Msa0192050:CDS 30.0%
! GTTTCAAGTAGAATCAAATC+TGG - chr2_1:7789119-7789138 Msa0192050:intron 30.0%
TCAATTTCACAAAGTGTGTT+TGG + chr2_1:7789196-7789215 None:intergenic 30.0%
! ATGTGCAATGGTTTATGTTT+TGG - chr2_1:7789237-7789256 Msa0192050:CDS 30.0%
ACGTAAAAGTGATTGTGTAT+TGG - chr2_1:7789268-7789287 Msa0192050:CDS 30.0%
TTGAGTGTAAGAATCATGTT+TGG - chr2_1:7789337-7789356 Msa0192050:intron 30.0%
! TTCTGGAGAGAAAATTGATT+GGG + chr2_1:7789468-7789487 None:intergenic 30.0%
! ATTCTGGAGAGAAAATTGAT+TGG + chr2_1:7789469-7789488 None:intergenic 30.0%
! ATTTTCTCTCCAGAATCATT+TGG - chr2_1:7789473-7789492 Msa0192050:intron 30.0%
TCACATTAGAGAATGCATTA+TGG - chr2_1:7789524-7789543 Msa0192050:intron 30.0%
!!! ATTTTAACTTTGTACATGGG+TGG + chr2_1:7789704-7789723 None:intergenic 30.0%
CACATCAGAATTAAAACCAA+AGG + chr2_1:7789761-7789780 None:intergenic 30.0%
ATATGTAAGTTGTAGGTTCT+GGG - chr2_1:7790502-7790521 Msa0192050:intron 30.0%
! TTTTTCCTGTAAACTACAAC+AGG - chr2_1:7790607-7790626 Msa0192050:intron 30.0%
AAACAAAGAGAAAGTAAACG+TGG + chr2_1:7790817-7790836 None:intergenic 30.0%
!! TTCATACTTTCTGAAATTGC+TGG - chr2_1:7790835-7790854 Msa0192050:intron 30.0%
TTAAATTACTACGGGTATCA+GGG + chr2_1:7791030-7791049 None:intergenic 30.0%
TTTAAATTACTACGGGTATC+AGG + chr2_1:7791031-7791050 None:intergenic 30.0%
GTAATTTAAATTCTCCTCTC+TGG - chr2_1:7791041-7791060 Msa0192050:intron 30.0%
TAGTATATGACAACACATTC+TGG + chr2_1:7791141-7791160 None:intergenic 30.0%
!!! TACTTTTTCCCTGATTTATC+AGG - chr2_1:7791171-7791190 Msa0192050:intron 30.0%
AAAAGCAACCTGATAAATCA+GGG + chr2_1:7791182-7791201 None:intergenic 30.0%
AAAAAGCAACCTGATAAATC+AGG + chr2_1:7791183-7791202 None:intergenic 30.0%
ACTATTTGTGCAATCTATCT+AGG + chr2_1:7791583-7791602 None:intergenic 30.0%
TAGATTGCACAAATAGTTTG+TGG - chr2_1:7791586-7791605 Msa0192050:intron 30.0%
! AGATTGCACAAATAGTTTGT+GGG - chr2_1:7791587-7791606 Msa0192050:intron 30.0%
AAGCAAACAGAATTGCAATA+TGG + chr2_1:7791638-7791657 None:intergenic 30.0%
ACCAAATTCACAAGTCAATT+TGG - chr2_1:7791782-7791801 Msa0192050:CDS 30.0%
CCAAATTCACAAGTCAATTT+GGG - chr2_1:7791783-7791802 Msa0192050:CDS 30.0%
CAAATTCACAAGTCAATTTG+GGG - chr2_1:7791784-7791803 Msa0192050:CDS 30.0%
GGTAGAAAATTACAGTTATC+TGG + chr2_1:7791928-7791947 None:intergenic 30.0%
! TGTAATTTTCTACCAAAGCA+CGG - chr2_1:7791934-7791953 Msa0192050:intron 30.0%
! TTTTTGCTTATAACTTGGGA+CGG + chr2_1:7792074-7792093 None:intergenic 30.0%
TTTCTTAGTAAGTCTGATCT+TGG + chr2_1:7792111-7792130 None:intergenic 30.0%
AAAGAATTTAGGAGGTTCTA+AGG + chr2_1:7792251-7792270 None:intergenic 30.0%
TGAACAAGAAAGAATTTAGG+AGG + chr2_1:7792259-7792278 None:intergenic 30.0%
CAGTGAACAAGAAAGAATTT+AGG + chr2_1:7792262-7792281 None:intergenic 30.0%
AAATACTAGTTCCAAGGATT+AGG + chr2_1:7792338-7792357 None:intergenic 30.0%
GCTTATAATTTGGGTGAAAA+AGG - chr2_1:7792454-7792473 Msa0192050:intron 30.0%
TTATTTGTGCTCTTGTTCTT+TGG - chr2_1:7792661-7792680 Msa0192050:intron 30.0%
TGCACAGCTATAGTTATAAA+GGG + chr2_1:7792824-7792843 None:intergenic 30.0%
TAAATCCTGGAGTATAATCA+AGG + chr2_1:7793069-7793088 None:intergenic 30.0%
TATCTACATCTCTTAAACCA+TGG + chr2_1:7793130-7793149 None:intergenic 30.0%
AATCAAGAAGAATGATACGT+GGG + chr2_1:7793277-7793296 None:intergenic 30.0%
TAAGAAGTTCAGCATTTGTT+TGG + chr2_1:7793328-7793347 None:intergenic 30.0%
AACTTCTTAAAGAAGAAGAC+TGG - chr2_1:7793339-7793358 Msa0192050:intron 30.0%
ATTGAAGTTTAAACCAGACT+TGG - chr2_1:7793415-7793434 Msa0192050:intron 30.0%
GCTTGTACTGTATTATTAAG+GGG - chr2_1:7793680-7793699 Msa0192050:intron 30.0%
! AAAAATCCAAAACTTGTTCC+TGG - chr2_1:7793855-7793874 Msa0192050:intron 30.0%
TGGAATAGATTCAAAAGCAA+TGG + chr2_1:7794093-7794112 None:intergenic 30.0%
AATAGAAGTTAAAGAAGACC+AGG + chr2_1:7794226-7794245 None:intergenic 30.0%
TGACTTTGGCAAAATAATGA+TGG + chr2_1:7794395-7794414 None:intergenic 30.0%
CCATGTTTATTTCAGTACAA+CGG - chr2_1:7794476-7794495 Msa0192050:intron 30.0%
AGTCAAAAAAACAACGTCAA+GGG + chr2_1:7794789-7794808 None:intergenic 30.0%
AAGTCAAAAAAACAACGTCA+AGG + chr2_1:7794790-7794809 None:intergenic 30.0%
GTAGAGTTAAAAAATCTGCT+AGG - chr2_1:7794810-7794829 Msa0192050:five_prime_UTR 30.0%
ATAAAACATCAGCACAATCA+AGG + chr2_1:7794883-7794902 None:intergenic 30.0%
TAGAAAACCCTGGAAATGAA+TGG + chr2_1:7788423-7788442 None:intergenic 35.0%
CAAAATGAACTAGAAAACCC+TGG + chr2_1:7788433-7788452 None:intergenic 35.0%
!!! CAGGGTTTTCTAGTTCATTT+TGG - chr2_1:7788431-7788450 Msa0192050:three_prime_UTR 35.0%
!!! GGTTTTCTAGTTCATTTTGG+CGG - chr2_1:7788434-7788453 Msa0192050:three_prime_UTR 35.0%
! AAACCCTAAATCTGAAACGA+AGG + chr2_1:7788605-7788624 None:intergenic 35.0%
! AGAAGAAGATACTTTGGTTC+TGG - chr2_1:7788725-7788744 Msa0192050:three_prime_UTR 35.0%
!! AGATACTTTGGTTCTGGATT+TGG - chr2_1:7788731-7788750 Msa0192050:three_prime_UTR 35.0%
CAAAAAAAGCTAACGCGTAA+AGG + chr2_1:7788842-7788861 None:intergenic 35.0%
TATGAGTTCATGTTTGTCTG+CGG - chr2_1:7788897-7788916 Msa0192050:CDS 35.0%
! AAAATTGATTCCGAGTGAAC+TGG - chr2_1:7788923-7788942 Msa0192050:CDS 35.0%
TCAAGTAGAATCAAATCTGG+AGG - chr2_1:7789122-7789141 Msa0192050:intron 35.0%
ATCAATTATGCCTCCAAAAG+TGG - chr2_1:7789168-7789187 Msa0192050:intron 35.0%
AAAGTGACTTGAATGTGCAA+TGG - chr2_1:7789225-7789244 Msa0192050:CDS 35.0%
CTTGATTCTAACTTGAAGCT+AGG + chr2_1:7789380-7789399 None:intergenic 35.0%
ATGTTTGTCTGTTCTCGAAT+AGG + chr2_1:7789421-7789440 None:intergenic 35.0%
GTGTTTCTTTCTCTCTAGTT+AGG - chr2_1:7789619-7789638 Msa0192050:CDS 35.0%
!!! AAGCACTACTTAGTTTTGGT+CGG + chr2_1:7789950-7789969 None:intergenic 35.0%
! TAGCAAGCACTACTTAGTTT+TGG + chr2_1:7789954-7789973 None:intergenic 35.0%
! TTAATGTGGTTGTTGTTGAC+TGG - chr2_1:7790006-7790025 Msa0192050:CDS 35.0%
!! ATCAAGAAGCATCTTTAGCA+TGG + chr2_1:7790075-7790094 None:intergenic 35.0%
ACTTATTGCCTATAAAGCAC+TGG - chr2_1:7790129-7790148 Msa0192050:CDS 35.0%
TTGAATGTAATCCCATGTGT+TGG - chr2_1:7790196-7790215 Msa0192050:CDS 35.0%
ACACCTTCAATCATAAGTGT+TGG - chr2_1:7790239-7790258 Msa0192050:CDS 35.0%
!! AATCATAAGTGTTGGTGCTA+CGG - chr2_1:7790247-7790266 Msa0192050:CDS 35.0%
ACGGAGCTTATAGCTTATTA+AGG - chr2_1:7790266-7790285 Msa0192050:CDS 35.0%
TTTGCAATTGTCATTCACTG+AGG - chr2_1:7790308-7790327 Msa0192050:CDS 35.0%
!! ACTGAGGTTCTAGCTTATTA+AGG - chr2_1:7790324-7790343 Msa0192050:CDS 35.0%
CTGAGATGTACATAGTTTCT+TGG - chr2_1:7790420-7790439 Msa0192050:CDS 35.0%
CATATGTAAGTTGTAGGTTC+TGG - chr2_1:7790501-7790520 Msa0192050:intron 35.0%
AGAATAGGTGTCTAAGTACT+CGG + chr2_1:7790587-7790606 None:intergenic 35.0%
CAATTCCTGTTGTAGTTTAC+AGG + chr2_1:7790615-7790634 None:intergenic 35.0%
GTAAACTACAACAGGAATTG+TGG - chr2_1:7790615-7790634 Msa0192050:intron 35.0%
!! TTCTGAAATTGCTGGCTTAT+TGG - chr2_1:7790843-7790862 Msa0192050:intron 35.0%
!! AAATTGCTGGCTTATTGGAA+TGG - chr2_1:7790848-7790867 Msa0192050:intron 35.0%
TGAACTGAGATTCTTTCACA+TGG - chr2_1:7791077-7791096 Msa0192050:intron 35.0%
GTTCTTGTCAATGAAAGCTT+CGG + chr2_1:7791259-7791278 None:intergenic 35.0%
TGCAGCATATAACAAAGCTT+TGG - chr2_1:7791381-7791400 Msa0192050:intron 35.0%
! AGCATATAACAAAGCTTTGG+AGG - chr2_1:7791384-7791403 Msa0192050:intron 35.0%
! TGAACTTTTGCAAATCCACT+TGG + chr2_1:7791512-7791531 None:intergenic 35.0%
ATTCCGATTATTTATGGAGG+TGG - chr2_1:7791555-7791574 Msa0192050:intron 35.0%
TGGGTAGTAATTCATAGTAC+AGG - chr2_1:7791611-7791630 Msa0192050:intron 35.0%
GGGTAGTAATTCATAGTACA+GGG - chr2_1:7791612-7791631 Msa0192050:intron 35.0%
CTATTGATGAACGAAAATGC+AGG - chr2_1:7791722-7791741 Msa0192050:intron 35.0%
!! CCCAAATTGACTTGTGAATT+TGG + chr2_1:7791786-7791805 None:intergenic 35.0%
TGCTGTGAGTATATTTCTCT+TGG - chr2_1:7791814-7791833 Msa0192050:intron 35.0%
AATTACATCAATCCGTGCTT+TGG + chr2_1:7791949-7791968 None:intergenic 35.0%
! TAGACAACTGTGTTGATGTT+AGG - chr2_1:7792019-7792038 Msa0192050:intron 35.0%
! AGACAACTGTGTTGATGTTA+GGG - chr2_1:7792020-7792039 Msa0192050:intron 35.0%
AGTACAGTGTAATGAAGATG+TGG + chr2_1:7792051-7792070 None:intergenic 35.0%
GGCGTGTAAAATACTATGAA+GGG + chr2_1:7792541-7792560 None:intergenic 35.0%
TGGCGTGTAAAATACTATGA+AGG + chr2_1:7792540-7792559 None:intergenic 35.0%
! AGGCTGATGTTTTCATTAGA+CGG + chr2_1:7792315-7792334 None:intergenic 35.0%
TCCTTGGAACTAGTATTTCA+CGG - chr2_1:7792340-7792359 Msa0192050:intron 35.0%
! CGGTAATTGAGTAGATGTTT+TGG - chr2_1:7792360-7792379 Msa0192050:intron 35.0%
! TTGCTTATAATTTGAGACGG+AGG - chr2_1:7792485-7792504 Msa0192050:intron 35.0%
! TGCTTATAATTTGAGACGGA+GGG - chr2_1:7792486-7792505 Msa0192050:intron 35.0%
TGGCGTGTAAAATACTATGA+AGG - chr2_1:7792540-7792559 Msa0192050:intron 35.0%
GGCGTGTAAAATACTATGAA+GGG - chr2_1:7792541-7792560 Msa0192050:intron 35.0%
GTGCACAGCTATAGTTATAA+AGG + chr2_1:7792825-7792844 None:intergenic 35.0%
CTATTGTTAAATGATGGCTG+TGG - chr2_1:7792856-7792875 Msa0192050:intron 35.0%
CATGCAATCAATGCTGTTAA+TGG + chr2_1:7793010-7793029 None:intergenic 35.0%
TAGCATCAATAGCTAAATCC+TGG + chr2_1:7793082-7793101 None:intergenic 35.0%
TATTGATGCTACTACAACAG+TGG - chr2_1:7793091-7793110 Msa0192050:intron 35.0%
ATTGATGCTACTACAACAGT+GGG - chr2_1:7793092-7793111 Msa0192050:intron 35.0%
CAATCAAGAAGAATGATACG+TGG + chr2_1:7793278-7793297 None:intergenic 35.0%
TTGCCCTCTTGAGTATAAAA+AGG - chr2_1:7793295-7793314 Msa0192050:intron 35.0%
TGCCCTCTTGAGTATAAAAA+GGG - chr2_1:7793296-7793315 Msa0192050:intron 35.0%
! CACCCTTTTTATACTCAAGA+GGG + chr2_1:7793301-7793320 None:intergenic 35.0%
! TCACCCTTTTTATACTCAAG+AGG + chr2_1:7793302-7793321 None:intergenic 35.0%
TGATAATAACCGAATTGCCA+AGG - chr2_1:7793523-7793542 Msa0192050:intron 35.0%
!! ATTATTAAGGGGTGCTAGTA+AGG - chr2_1:7793691-7793710 Msa0192050:intron 35.0%
TAGTAAGGATCTCTTGAATG+AGG - chr2_1:7793706-7793725 Msa0192050:intron 35.0%
AGAAAGCAGCATGATCAAAT+AGG + chr2_1:7793785-7793804 None:intergenic 35.0%
TGAATCTATTCCACGTACTT+TGG - chr2_1:7794100-7794119 Msa0192050:intron 35.0%
!! TCTTACTTTTCCTTGTAGTG+CGG + chr2_1:7794162-7794181 None:intergenic 35.0%
ATGCAAATGGAGAAAATGCA+TGG - chr2_1:7794261-7794280 Msa0192050:intron 35.0%
AATGGAGAAAATGCATGGAT+TGG - chr2_1:7794266-7794285 Msa0192050:intron 35.0%
!! ATTGGCATTGATGGAAATAC+TGG - chr2_1:7794284-7794303 Msa0192050:intron 35.0%
TCCTAACTCTAATGTGACTT+TGG + chr2_1:7794409-7794428 None:intergenic 35.0%
CCGTTGTACTGAAATAAACA+TGG + chr2_1:7794479-7794498 None:intergenic 35.0%
!! TTTGTATTATGGGCTAGATC+TGG - chr2_1:7794573-7794592 Msa0192050:intron 35.0%
!! TTGTATTATGGGCTAGATCT+GGG - chr2_1:7794574-7794593 Msa0192050:intron 35.0%
AGTTTGTGCCTTCACATTAT+AGG + chr2_1:7794603-7794622 None:intergenic 35.0%
! AGGATTGATGATATAGTGAG+TGG - chr2_1:7794659-7794678 Msa0192050:intron 35.0%
!! TCTCAATCTTAGGCTTTGAA+GGG + chr2_1:7794715-7794734 None:intergenic 35.0%
!! TTGTGCTGATGTTTTATACC+TGG - chr2_1:7794886-7794905 Msa0192050:intron 35.0%
TTGCTTAAACAAACAGTACC+AGG + chr2_1:7794907-7794926 None:intergenic 35.0%
TGTTCAAGTGTCATGCTTTA+TGG - chr2_1:7794944-7794963 Msa0192050:intron 35.0%
!!! TGTTGTTTTAAGATTGTGCC+AGG - chr2_1:7794980-7794999 Msa0192050:intron 35.0%
TGAAAACAAGCAACTCTCAA+TGG + chr2_1:7795025-7795044 None:intergenic 35.0%
TTTCAGAACATACATCGTTC+TGG - chr2_1:7795055-7795074 Msa0192050:five_prime_UTR 35.0%
TTCAGAACATACATCGTTCT+GGG - chr2_1:7795056-7795075 Msa0192050:five_prime_UTR 35.0%
ACAGTGTTCCATTCATTTCC+AGG - chr2_1:7788412-7788431 Msa0192050:three_prime_UTR 40.0%
CAGTGTTCCATTCATTTCCA+GGG - chr2_1:7788413-7788432 Msa0192050:three_prime_UTR 40.0%
CGTAGAAGTTACCTGAAGTT+GGG + chr2_1:7788540-7788559 None:intergenic 40.0%
CCACCTTCGTTTCAGATTTA+GGG - chr2_1:7788599-7788618 Msa0192050:three_prime_UTR 40.0%
AGGGCAAAACGAAGAAATAC+TGG + chr2_1:7788633-7788652 None:intergenic 40.0%
TGAGGACTGCATGATTTCTA+GGG + chr2_1:7788792-7788811 None:intergenic 40.0%
CTTACTGAGAACTACAACTG+AGG + chr2_1:7788810-7788829 None:intergenic 40.0%
!! AGTGTGTTTGGTTCCACTTT+TGG + chr2_1:7789184-7789203 None:intergenic 40.0%
TGGAGAGAAAATTGATTGGG+AGG + chr2_1:7789465-7789484 None:intergenic 40.0%
TGGGTGGCTGAAATGATATA+TGG + chr2_1:7789688-7789707 None:intergenic 40.0%
TTTGGTCGGTAATCAGTAAG+AGG + chr2_1:7789936-7789955 None:intergenic 40.0%
AAGATGCTTCTTGATGCTTC+TGG - chr2_1:7790080-7790099 Msa0192050:CDS 40.0%
TATCAGTGCCAGTGCTTTAT+AGG + chr2_1:7790140-7790159 None:intergenic 40.0%
CTGATATGACACCAACACAT+GGG + chr2_1:7790210-7790229 None:intergenic 40.0%
TCTGATATGACACCAACACA+TGG + chr2_1:7790211-7790230 None:intergenic 40.0%
! CTTATGATTGAAGGTGTGTC+CGG + chr2_1:7790236-7790255 None:intergenic 40.0%
GCACCAACACTTATGATTGA+AGG + chr2_1:7790245-7790264 None:intergenic 40.0%
CGGTGAATGACAATTGCAAA+CGG + chr2_1:7790366-7790385 None:intergenic 40.0%
TTTGCAATTGTCATTCACCG+AGG - chr2_1:7790366-7790385 Msa0192050:CDS 40.0%
! TTCTTGGTGATTGCAAGATG+TGG - chr2_1:7790436-7790455 Msa0192050:CDS 40.0%
GGAATTGTGGTAACAAACGA+TGG - chr2_1:7790628-7790647 Msa0192050:intron 40.0%
AGAATGAGAGACAAGTACCT+TGG + chr2_1:7790695-7790714 None:intergenic 40.0%
GTGAGCAAGAACGTACTATA+TGG + chr2_1:7790754-7790773 None:intergenic 40.0%
ACCACATCTGTCATCATTCT+TGG - chr2_1:7790925-7790944 Msa0192050:intron 40.0%
ACCAAGAATGATGACAGATG+TGG + chr2_1:7790929-7790948 None:intergenic 40.0%
! TACGGGTATCAGGGAATTTT+AGG + chr2_1:7791021-7791040 None:intergenic 40.0%
AAAGCAACTTAACACCAGAG+AGG + chr2_1:7791058-7791077 None:intergenic 40.0%
!! TCTCATCATTTTTGTGCAGC+TGG - chr2_1:7791216-7791235 Msa0192050:intron 40.0%
TTACCTCGGCAAATAACTGT+AGG + chr2_1:7791288-7791307 None:intergenic 40.0%
!! AGGCATCGCAATTTTGTCAA+TGG + chr2_1:7791422-7791441 None:intergenic 40.0%
TTACGGTCTTGAGCATCAAT+AGG + chr2_1:7791442-7791461 None:intergenic 40.0%
! CTTTTGCAAATCCACTTGGA+GGG + chr2_1:7791508-7791527 None:intergenic 40.0%
! ACTTTTGCAAATCCACTTGG+AGG + chr2_1:7791509-7791528 None:intergenic 40.0%
GTGCCACCTCCATAAATAAT+CGG + chr2_1:7791561-7791580 None:intergenic 40.0%
GATGAGTGATGTATACTGCT+AGG + chr2_1:7791669-7791688 None:intergenic 40.0%
TTGATGAACGAAAATGCAGG+AGG - chr2_1:7791725-7791744 Msa0192050:intron 40.0%
AAATGCAGGAGGACAAATGT+TGG - chr2_1:7791736-7791755 Msa0192050:CDS 40.0%
AATGCAGGAGGACAAATGTT+GGG - chr2_1:7791737-7791756 Msa0192050:CDS 40.0%
TACTAGTTCCAAGGATTAGG+AGG + chr2_1:7792335-7792354 None:intergenic 40.0%
ACCGTGAAATACTAGTTCCA+AGG + chr2_1:7792344-7792363 None:intergenic 40.0%
!! TTGTTTCTGTTCGAGTGAAC+AGG - chr2_1:7792690-7792709 Msa0192050:intron 40.0%
GCAATCAATGCTGTTAATGG+AGG + chr2_1:7793007-7793026 None:intergenic 40.0%
GTTGTCCTTGATTATACTCC+AGG - chr2_1:7793061-7793080 Msa0192050:intron 40.0%
!! ACAACAGTGGGTGTTGATAT+TGG - chr2_1:7793104-7793123 Msa0192050:intron 40.0%
GTTGGAGGAAGAATACATTG+AGG - chr2_1:7793376-7793395 Msa0192050:intron 40.0%
TTCTCTGTAACAACCAAGTC+TGG + chr2_1:7793431-7793450 None:intergenic 40.0%
! AGACTTGGTTGTTACAGAGA+AGG - chr2_1:7793430-7793449 Msa0192050:intron 40.0%
! GACTTGGTTGTTACAGAGAA+GGG - chr2_1:7793431-7793450 Msa0192050:intron 40.0%
AGAGAAGGGTCTTAGTGATT+TGG - chr2_1:7793445-7793464 Msa0192050:intron 40.0%
TTAGTGCAATCAGAAGACTG+AGG - chr2_1:7793495-7793514 Msa0192050:CDS 40.0%
TGAGGTTGAAAGAAACCTAC+AGG - chr2_1:7793724-7793743 Msa0192050:intron 40.0%
GCAGCATGATCAAATAGGTT+TGG + chr2_1:7793780-7793799 None:intergenic 40.0%
TATGTTCCTAGCAACAGACA+TGG + chr2_1:7793832-7793851 None:intergenic 40.0%
! AATCCAAAACTTGTTCCTGG+AGG - chr2_1:7793858-7793877 Msa0192050:intron 40.0%
CAGAAGAGTTCTTCTATCGA+AGG - chr2_1:7793918-7793937 Msa0192050:intron 40.0%
!! TTCTATCGAAGGCATTGAGA+AGG - chr2_1:7793929-7793948 Msa0192050:intron 40.0%
ATGCTTCATCCATGTTCGAT+GGG - chr2_1:7793988-7794007 Msa0192050:intron 40.0%
GAATTCAAACCCATCGAACA+TGG + chr2_1:7794000-7794019 None:intergenic 40.0%
! CAATTTTGTGCCAAAGTACG+TGG + chr2_1:7794113-7794132 None:intergenic 40.0%
CGTACTTTGGCACAAAATTG+TGG - chr2_1:7794113-7794132 Msa0192050:intron 40.0%
ATTGTGGAGTAAACGTCATC+CGG - chr2_1:7794129-7794148 Msa0192050:intron 40.0%
!! AATGCATGGATTGGCATTGA+TGG - chr2_1:7794275-7794294 Msa0192050:intron 40.0%
GCCAAAGTCACATTAGAGTT+AGG - chr2_1:7794405-7794424 Msa0192050:intron 40.0%
! GTCTCAATCTTAGGCTTTGA+AGG + chr2_1:7794716-7794735 None:intergenic 40.0%
! AAGTGTGTTTTCAGTCTGGA+AGG + chr2_1:7794766-7794785 None:intergenic 40.0%
GAAAACAAACAGTTTCAGCC+TGG + chr2_1:7795001-7795020 None:intergenic 40.0%
TATCAAGTTTCACCGACACA+AGG + chr2_1:7795109-7795128 None:intergenic 40.0%
CGAGTGAGTAACAGAGAGAA+AGG + chr2_1:7788472-7788491 None:intergenic 45.0%
TGAAGTTGGGAGGTGGTTAA+AGG + chr2_1:7788527-7788546 None:intergenic 45.0%
TTTAACCACCTCCCAACTTC+AGG - chr2_1:7788526-7788545 Msa0192050:three_prime_UTR 45.0%
AGAAGTTACCTGAAGTTGGG+AGG + chr2_1:7788537-7788556 None:intergenic 45.0%
GCGTAGAAGTTACCTGAAGT+TGG + chr2_1:7788541-7788560 None:intergenic 45.0%
GCCACCTTCGTTTCAGATTT+AGG - chr2_1:7788598-7788617 Msa0192050:three_prime_UTR 45.0%
! CCCTAAATCTGAAACGAAGG+TGG + chr2_1:7788602-7788621 None:intergenic 45.0%
CTGAGGACTGCATGATTTCT+AGG + chr2_1:7788793-7788812 None:intergenic 45.0%
!! GTGTTTGGTTCCACTTTTGG+AGG + chr2_1:7789181-7789200 None:intergenic 45.0%
! ATAAGCGGGCTCTTAACCTT+TGG - chr2_1:7789742-7789761 Msa0192050:intron 45.0%
! TCCACGCTTTAAATGTGCAG+AGG - chr2_1:7789846-7789865 Msa0192050:CDS 45.0%
! TCCTCTGCACATTTAAAGCG+TGG + chr2_1:7789850-7789869 None:intergenic 45.0%
!! GACTCTTTGAAACGTGAGTC+TGG - chr2_1:7789868-7789887 Msa0192050:CDS 45.0%
GGTGCATCATGCTAATATCC+AGG - chr2_1:7789897-7789916 Msa0192050:CDS 45.0%
TGCTAATATCCAGGCGTCAA+AGG - chr2_1:7789906-7789925 Msa0192050:CDS 45.0%
! TGTGGTTGTTGTTGACTGGA+AGG - chr2_1:7790010-7790029 Msa0192050:CDS 45.0%
AGCATCTTTAGCATGGACCT+GGG + chr2_1:7790068-7790087 None:intergenic 45.0%
AAGCATCTTTAGCATGGACC+TGG + chr2_1:7790069-7790088 None:intergenic 45.0%
ATGCTTCTTGATGCTTCTGG+AGG - chr2_1:7790083-7790102 Msa0192050:CDS 45.0%
!! GTTGGTGTCATATCAGACAC+CGG - chr2_1:7790214-7790233 Msa0192050:CDS 45.0%
TTCTTGCTCACGTCCTTTGA+AGG - chr2_1:7790763-7790782 Msa0192050:intron 45.0%
CCAGAAAGTTGTGCCTTCAA+AGG + chr2_1:7790779-7790798 None:intergenic 45.0%
! CCTTTGAAGGCACAACTTTC+TGG - chr2_1:7790776-7790795 Msa0192050:intron 45.0%
ATCTCCGACTTCTTCGTCTT+GGG + chr2_1:7790902-7790921 None:intergenic 45.0%
CAATGAAAGCTTCGGCAACA+TGG + chr2_1:7791251-7791270 None:intergenic 45.0%
CATCCTACAGTTATTTGCCG+AGG - chr2_1:7791282-7791301 Msa0192050:intron 45.0%
TTTGTCACAAACCCTCCAAG+TGG - chr2_1:7791494-7791513 Msa0192050:intron 45.0%
! TGCACAAATAGTTTGTGGGC+TGG - chr2_1:7791591-7791610 Msa0192050:intron 45.0%
! GCACAAATAGTTTGTGGGCT+GGG - chr2_1:7791592-7791611 Msa0192050:intron 45.0%
ATGCAGGAGGACAAATGTTG+GGG - chr2_1:7791738-7791757 Msa0192050:CDS 45.0%
GGGCTTGTAAAAAGCTGCAT+AGG - chr2_1:7791758-7791777 Msa0192050:CDS 45.0%
! CAACTGTGTTGATGTTAGGG+AGG - chr2_1:7792023-7792042 Msa0192050:intron 45.0%
AACATCAGCCTCCTAATCCT+TGG - chr2_1:7792324-7792343 Msa0192050:intron 45.0%
GCCTATAACGTCACAATGGT+GGG + chr2_1:7792948-7792967 None:intergenic 45.0%
TGAGGATTCGAGAGTTCTCA+AGG - chr2_1:7793193-7793212 Msa0192050:intron 45.0%
GAGGATTCGAGAGTTCTCAA+GGG - chr2_1:7793194-7793213 Msa0192050:intron 45.0%
TCTTTCTCCTCATCTTGCCA+GGG + chr2_1:7793247-7793266 None:intergenic 45.0%
ATCTTTCTCCTCATCTTGCC+AGG + chr2_1:7793248-7793267 None:intergenic 45.0%
CTGGAGTCTCTTGTTGAAGT+TGG - chr2_1:7793358-7793377 Msa0192050:intron 45.0%
GAGTCTCTTGTTGAAGTTGG+AGG - chr2_1:7793361-7793380 Msa0192050:intron 45.0%
TGCCATTATCTGAGCAAGCA+TGG - chr2_1:7793470-7793489 Msa0192050:CDS 45.0%
CTCCATGCTTGCTCAGATAA+TGG + chr2_1:7793475-7793494 None:intergenic 45.0%
! CTGAAACTCTTTTGCATGCC+AGG - chr2_1:7793803-7793822 Msa0192050:intron 45.0%
!! CTGTTGTTTCGTTGAACCAG+TGG - chr2_1:7793965-7793984 Msa0192050:intron 45.0%
! AACATGGATGAAGCATCCAC+TGG + chr2_1:7793984-7794003 None:intergenic 45.0%
GATGCTTCATCCATGTTCGA+TGG - chr2_1:7793987-7794006 Msa0192050:intron 45.0%
!!! ATGCTCTTTTCTCTGAAGCC+TGG - chr2_1:7794205-7794224 Msa0192050:intron 45.0%
CTGGGATGCCTATAATGTGA+AGG - chr2_1:7794592-7794611 Msa0192050:intron 45.0%
AAGCATGCATGCAGCTTCAA+TGG + chr2_1:7794636-7794655 None:intergenic 45.0%
AAGCTGCATGCATGCTTCTA+AGG - chr2_1:7794639-7794658 Msa0192050:intron 45.0%
GAGTGGAATCAAGAAGAAGC+AGG - chr2_1:7794676-7794695 Msa0192050:intron 45.0%
AAAGCCTAAGATTGAGACCG+AGG - chr2_1:7794718-7794737 Msa0192050:intron 45.0%
AAGCCTAAGATTGAGACCGA+GGG - chr2_1:7794719-7794738 Msa0192050:intron 45.0%
!! AGGGAAGTGTGTTTTCAGTC+TGG + chr2_1:7794770-7794789 None:intergenic 45.0%
! AGGCCTTTTATGCCTTGTGT+CGG - chr2_1:7795094-7795113 Msa0192050:five_prime_UTR 45.0%
TCACCGACACAAGGCATAAA+AGG + chr2_1:7795100-7795119 None:intergenic 45.0%
AGTTGGGAGGTGGTTAAAGG+AGG + chr2_1:7788524-7788543 None:intergenic 50.0%
AGTTACCTGAAGTTGGGAGG+TGG + chr2_1:7788534-7788553 None:intergenic 50.0%
CTGAAACGAAGGTGGCGAAT+CGG + chr2_1:7788594-7788613 None:intergenic 50.0%
! GAAACGTGAGTCTGGAGCAA+AGG - chr2_1:7789876-7789895 Msa0192050:CDS 50.0%
TTCGTACAACATTGGGACCC+AGG - chr2_1:7790048-7790067 Msa0192050:CDS 50.0%
TATTGCTCATCCAGCTGCCA+AGG - chr2_1:7790675-7790694 Msa0192050:intron 50.0%
CATCTCCGACTTCTTCGTCT+TGG + chr2_1:7790903-7790922 None:intergenic 50.0%
CAAGACGAAGAAGTCGGAGA+TGG - chr2_1:7790901-7790920 Msa0192050:intron 50.0%
! CATGCTAACTTGTGCCCCAA+GGG + chr2_1:7792759-7792778 None:intergenic 50.0%
! TCATGCTAACTTGTGCCCCA+AGG + chr2_1:7792760-7792779 None:intergenic 50.0%
CCTTCACGGATCGTCTAAGA+CGG + chr2_1:7792921-7792940 None:intergenic 50.0%
CGTCTTAGACGATCCGTGAA+GGG - chr2_1:7792919-7792938 Msa0192050:intron 50.0%
GCCCACCATTGTGACGTTAT+AGG - chr2_1:7792944-7792963 Msa0192050:intron 50.0%
GGCCTATAACGTCACAATGG+TGG + chr2_1:7792949-7792968 None:intergenic 50.0%
TGCGGCCTATAACGTCACAA+TGG + chr2_1:7792952-7792971 None:intergenic 50.0%
TGTGACGTTATAGGCCGCAA+TGG - chr2_1:7792953-7792972 Msa0192050:intron 50.0%
GCCGCAATGGCGTGTTTATA+GGG - chr2_1:7792966-7792985 Msa0192050:intron 50.0%
GCCCTATAAACACGCCATTG+CGG + chr2_1:7792970-7792989 None:intergenic 50.0%
!! GTGGGTGTTGATATTGGCCA+TGG - chr2_1:7793110-7793129 Msa0192050:intron 50.0%
ATCAAGGTTGAGAAGGTCCC+TGG - chr2_1:7793161-7793180 Msa0192050:intron 50.0%
AACAAAGATGTGGTTGCCCC+TGG - chr2_1:7793227-7793246 Msa0192050:intron 50.0%
CTTTCTCCTCATCTTGCCAG+GGG + chr2_1:7793246-7793265 None:intergenic 50.0%
AACCGAATTGCCAAGGCATG+CGG - chr2_1:7793530-7793549 Msa0192050:intron 50.0%
AATAACAGCACCGCATGCCT+TGG + chr2_1:7793543-7793562 None:intergenic 50.0%
GAACAGACCAGATGAGTTGC+AGG - chr2_1:7793565-7793584 Msa0192050:intron 50.0%
TCAGACTCCTGCAACTCATC+TGG + chr2_1:7793575-7793594 None:intergenic 50.0%
GAGTTGCAGGAGTCTGATGT+CGG - chr2_1:7793578-7793597 Msa0192050:intron 50.0%
TAGCAACAGACATGGCATCC+TGG + chr2_1:7793824-7793843 None:intergenic 50.0%
AGGATGCCATGTCTGTTGCT+AGG - chr2_1:7793823-7793842 Msa0192050:intron 50.0%
! CCACCTCCAGGAACAAGTTT+TGG + chr2_1:7793864-7793883 None:intergenic 50.0%
! CCAAAACTTGTTCCTGGAGG+TGG - chr2_1:7793861-7793880 Msa0192050:intron 50.0%
GCAATGGCAGCAGCTTCATA+TGG + chr2_1:7794077-7794096 None:intergenic 50.0%
CTTGTAGTGCGGTCATTGTC+CGG + chr2_1:7794151-7794170 None:intergenic 50.0%
! TGCTGACATGAAAGAGCGCA+AGG - chr2_1:7794313-7794332 Msa0192050:intron 50.0%
TCTCCCTCGGTCTCAATCTT+AGG + chr2_1:7794725-7794744 None:intergenic 50.0%
CTGGGTAAATGCGATTACGC+AGG - chr2_1:7795074-7795093 Msa0192050:five_prime_UTR 50.0%
GTGGTTAAAGGAGGAGGAGG+CGG + chr2_1:7788515-7788534 None:intergenic 55.0%
GAGGTGGTTAAAGGAGGAGG+AGG + chr2_1:7788518-7788537 None:intergenic 55.0%
TGGGAGGTGGTTAAAGGAGG+AGG + chr2_1:7788521-7788540 None:intergenic 55.0%
AGAGGATCACCTTTGACGCC+TGG + chr2_1:7789918-7789937 None:intergenic 55.0%
GAGACAAGTACCTTGGCAGC+TGG + chr2_1:7790688-7790707 None:intergenic 55.0%
CGCACCCAAGACGAAGAAGT+CGG - chr2_1:7790895-7790914 Msa0192050:intron 55.0%
CCGTCTTAGACGATCCGTGA+AGG - chr2_1:7792918-7792937 Msa0192050:intron 55.0%
!! CAATGGTGGGCATCCCTTCA+CGG + chr2_1:7792935-7792954 None:intergenic 55.0%
GGCCGCAATGGCGTGTTTAT+AGG - chr2_1:7792965-7792984 Msa0192050:intron 55.0%
AATCCTCAAGCTGCGCACCA+GGG + chr2_1:7793181-7793200 None:intergenic 55.0%
CACCGCATGCCTTGGCAATT+CGG + chr2_1:7793535-7793554 None:intergenic 55.0%
CAGGAGTCTGATGTCGGTAC+TGG - chr2_1:7793584-7793603 Msa0192050:intron 55.0%
!! TCTGATGTCGGTACTGGTGC+TGG - chr2_1:7793590-7793609 Msa0192050:intron 55.0%
!! CTGATGTCGGTACTGGTGCT+GGG - chr2_1:7793591-7793610 Msa0192050:intron 55.0%
ATCTCTGTAGCACCACCTCC+AGG + chr2_1:7793876-7793895 None:intergenic 55.0%
CGGACAATGACCGCACTACA+AGG - chr2_1:7794149-7794168 Msa0192050:intron 55.0%
ATCAAGAAGAAGCAGGCCCC+TGG - chr2_1:7794683-7794702 Msa0192050:intron 55.0%
! TGGAAGGATTTGCTCGCCGT+CGG + chr2_1:7794750-7794769 None:intergenic 55.0%
TGTGCCCCAACTTGTGCCCT+TGG - chr2_1:7792740-7792759 Msa0192050:intron 60.0%
GTGCCCCAACTTGTGCCCTT+GGG - chr2_1:7792741-7792760 Msa0192050:intron 60.0%
TGCCCCAACTTGTGCCCTTG+GGG - chr2_1:7792742-7792761 Msa0192050:intron 60.0%
! TGCCCCAAGGGCACAAGTTG+GGG + chr2_1:7792747-7792766 None:intergenic 60.0%
! GTGCCCCAAGGGCACAAGTT+GGG + chr2_1:7792748-7792767 None:intergenic 60.0%
! TGTGCCCCAAGGGCACAAGT+TGG + chr2_1:7792749-7792768 None:intergenic 60.0%
TCTGCCATGCCATTCCGCCA+CGG + chr2_1:7792887-7792906 None:intergenic 60.0%
GAATCCTCAAGCTGCGCACC+AGG + chr2_1:7793182-7793201 None:intergenic 60.0%
TGGTTGCCCCTGGCAAGATG+AGG - chr2_1:7793237-7793256 Msa0192050:intron 60.0%
! CTTTGAAGGGCCTGCTCCAG+GGG + chr2_1:7794702-7794721 None:intergenic 60.0%
!! GCTTTGAAGGGCCTGCTCCA+GGG + chr2_1:7794703-7794722 None:intergenic 60.0%
AGGAGGAGGAGGCGGCGTTA+GGG + chr2_1:7788507-7788526 None:intergenic 65.0%
AAGGAGGAGGAGGCGGCGTT+AGG + chr2_1:7788508-7788527 None:intergenic 65.0%
AAGAAGCAGGCCCCTGGAGC+AGG - chr2_1:7794689-7794708 Msa0192050:intron 65.0%
!! GGCTTTGAAGGGCCTGCTCC+AGG + chr2_1:7794704-7794723 None:intergenic 65.0%
GAGACCGAGGGAGATGCCGA+CGG - chr2_1:7794731-7794750 Msa0192050:CDS 65.0%
TGATGGCTGTGGCGCTGCCG+TGG - chr2_1:7792867-7792886 Msa0192050:CDS 70.0%
! GCTGCCGTGGCGGAATGGCA+TGG - chr2_1:7792880-7792899 Msa0192050:CDS 70.0%
GGTCCCTGGTGCGCAGCTTG+AGG - chr2_1:7793175-7793194 Msa0192050:intron 70.0%
CTCGCCGTCGGCATCTCCCT+CGG + chr2_1:7794738-7794757 None:intergenic 70.0%
TGGCTGTGGCGCTGCCGTGG+CGG - chr2_1:7792870-7792889 Msa0192050:CDS 75.0%
! GTGGCGCTGCCGTGGCGGAA+TGG - chr2_1:7792875-7792894 Msa0192050:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 7788397 7795156 7788397 ID=Msa0192050;Name=Msa0192050
chr2_1 mRNA 7788397 7795156 7788397 ID=Msa0192050-mRNA-1;Parent=Msa0192050;Name=Msa0192050-mRNA-1;_AED=0.07;_eAED=0.07;_QI=236|1|1|1|0.92|0.85|14|381|555
chr2_1 exon 7788397 7788963 7788397 ID=Msa0192050-mRNA-1:exon:3648;Parent=Msa0192050-mRNA-1
chr2_1 exon 7789219 7789293 7789219 ID=Msa0192050-mRNA-1:exon:3647;Parent=Msa0192050-mRNA-1
chr2_1 exon 7789378 7789482 7789378 ID=Msa0192050-mRNA-1:exon:3646;Parent=Msa0192050-mRNA-1
chr2_1 exon 7789603 7789728 7789603 ID=Msa0192050-mRNA-1:exon:3645;Parent=Msa0192050-mRNA-1
chr2_1 exon 7789808 7790470 7789808 ID=Msa0192050-mRNA-1:exon:3644;Parent=Msa0192050-mRNA-1
chr2_1 exon 7791736 7791809 7791736 ID=Msa0192050-mRNA-1:exon:3643;Parent=Msa0192050-mRNA-1
chr2_1 exon 7792096 7792167 7792096 ID=Msa0192050-mRNA-1:exon:3642;Parent=Msa0192050-mRNA-1
chr2_1 exon 7792250 7792318 7792250 ID=Msa0192050-mRNA-1:exon:3641;Parent=Msa0192050-mRNA-1
chr2_1 exon 7792607 7792676 7792607 ID=Msa0192050-mRNA-1:exon:3640;Parent=Msa0192050-mRNA-1
chr2_1 exon 7792857 7792924 7792857 ID=Msa0192050-mRNA-1:exon:3639;Parent=Msa0192050-mRNA-1
chr2_1 exon 7793449 7793521 7793449 ID=Msa0192050-mRNA-1:exon:3638;Parent=Msa0192050-mRNA-1
chr2_1 exon 7793626 7793687 7793626 ID=Msa0192050-mRNA-1:exon:3637;Parent=Msa0192050-mRNA-1
chr2_1 exon 7794729 7794838 7794729 ID=Msa0192050-mRNA-1:exon:3636;Parent=Msa0192050-mRNA-1
chr2_1 exon 7795006 7795156 7795006 ID=Msa0192050-mRNA-1:exon:3635;Parent=Msa0192050-mRNA-1
chr2_1 five_prime_UTR 7795006 7795156 7795006 ID=Msa0192050-mRNA-1:five_prime_utr;Parent=Msa0192050-mRNA-1
chr2_1 five_prime_UTR 7794754 7794838 7794754 ID=Msa0192050-mRNA-1:five_prime_utr;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7794729 7794753 7794729 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7793626 7793687 7793626 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7793449 7793521 7793449 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7792857 7792924 7792857 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7792607 7792676 7792607 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7792250 7792318 7792250 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7792096 7792167 7792096 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7791736 7791809 7791736 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7789808 7790470 7789808 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7789603 7789728 7789603 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7789378 7789482 7789378 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7789219 7789293 7789219 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 CDS 7788778 7788963 7788778 ID=Msa0192050-mRNA-1:cds;Parent=Msa0192050-mRNA-1
chr2_1 three_prime_UTR 7788397 7788777 7788397 ID=Msa0192050-mRNA-1:three_prime_utr;Parent=Msa0192050-mRNA-1
Gene Sequence

>Msa0192050

ATGCAGTCCTCAGTTGTAGTTCTCAAGGACTCTTTGAAACGTGAGTCTGGAGCAAAGGTGCATCATGCTAATATCCAGGCGTCAAAGGCTGTTGCTGATATAATTCGTACAACATTGGGACCCAGGTCCATGCTAAAGATGCTTCTTGATGCTTCTGGAGGAATTGTGGTAACAAACGATGGAAATGCTATCTTACGTGAATTAGATATTGCTCATCCAGCTGCCAAGTCTATGATTGAATTAAGTCGCACCCAAGACGAAGAAGTCGGAGATGGAACCACATCTGTCATCATTCTTGCTGGTGAGATGCTCCATGTTGCCGAAGCTTTCATTGACAAGAACTATCATCCTACAGTTATTTGCCGAGCATATAACAAAGCTTTGGAGGATGCTATTGCTGCCATTGACAAAATTGCGATGCCTATTGATGCTCAAGACCGAGGACAAATGTTGGGGCTTGTAAAAAGCTGCATAGGCACCAAATTCACAAGTCAATTTGGGGATTTAATTGCTGATTTAGCTATTGATGCTACTACAACAGTGGGTGTTGATATTGGCCATGGTTTAAGAGATGTAGATATTAAAAATTATATCAAGGTTGAGAAGGTCCCTGGTGCGCAGCTTGAGGATTCGAGAGTTCTCAAGGGAGTAATGTTTAACAAAGATGTGGTTGCCCCTGGCAAGATGAGGAGAAAGATTGTTAACCCACGTATCATTCTTCTTGATTGCCCTCTTGAGTATAAAAAGGGTGAAAACCAAACAAATGCTGAACTTCTTAAAGAAGAAGACTGGAGTCTCTTGTTGAAGTTGGAGGAAGAATACATTGAGGAGCTCTGCATGCAGATATTGAAGTTTAAACCAGACTTGGTTGTTACAGAGAAGGGTCTTAGTGATTTGGCATGCCATTATCTGAGCAAGCATGGAGTTAGTGCAATCAGAAGACTGAGGAAAACTGATAATAACCGAATTGCCAAGGCATGCGGTGCTGTTATTGTGAACAGACCAGATGAGTTGCAGGAGTCTGATGTCGGTACTGGTGCTGGGTTATTTGAAGTTAAGAAAATTGGAGACGAGTACTTTGCTTTTATTGTTGATTGCAAAGAACCCAAAGCTTGTACTGTATTATTAAGGGGTGCTAGTAAGGATCTCTTGAATGAGGTTGAAAGAAACCTACAGGATGCCATGTCTGTTGCTAGGAACATAATAAAAAATCCAAAACTTGTTCCTGGAGGTGGTGCTACAGAGATGACTGTGTCAGCTGCTTTGAAACAGAAGAGTTCTTCTATCGAAGGCATTGAGAAGTGGCCATATGAAGCTGCTGCCATTGCTTTTGAATCTATTCCACGTACTTTGGCACAAAATTGTGGAGTAAACGTCATCCGGACAATGACCGCACTACAAGGAAAACATGCAAATGGAGAAAATGCATGGATTGGCATTGATGGAAATACTGGTGTCATTGCTGACATGAAAGAGCGCAAGATCTGGGATGCCTATAATGTGAAGGCACAAACTTTTAAGACTGCCATTGAAGCTGCATGCATGCTTCTAAGGATTGATGATATAGTGAGTGGAATCAAGAAGAAGCAGGCCCCTGGAGCAGGCCCTTCAAAGCCTAAGATTGAGACCGAGGGAGATGCCGACGGCGAGCAAATCCTTCCAGACTGA

Protein sequence

>Msa0192050

MQSSVVVLKDSLKRESGAKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDIAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFIDKNYHPTVICRAYNKALEDAIAAIDKIAMPIDAQDRGQMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDIGHGLRDVDIKNYIKVEKVPGAQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELLKEEDWSLLLKLEEEYIEELCMQILKFKPDLVVTEKGLSDLACHYLSKHGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEYFAFIVDCKEPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATEMTVSAALKQKSSSIEGIEKWPYEAAAIAFESIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGVIADMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGAGPSKPKIETEGDADGEQILPD*