Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699300 | XP_039685386.1 | 99.231 | 130 | 1 | 0 | 25 | 154 | 1 | 130 | 2.07e-87 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699300 | sp|Q9ZQX4|VATF_ARATH | 87.302 | 126 | 16 | 0 | 25 | 150 | 1 | 126 | 2.10e-78 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699300 | I3SQD3 | 99.231 | 130 | 1 | 0 | 25 | 154 | 1 | 130 | 9.90e-88 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077320 | Msa0699300 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
| Msa0616090 | Msa0699300 | 0.814113 | 1.817612e-51 | -8.615850e-47 |
| Msa0616580 | Msa0699300 | 0.809472 | 1.860753e-50 | -8.615850e-47 |
| Msa0699300 | Msa0699910 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0699300 | Msa0700410 | 0.807671 | 4.510901e-50 | -8.615850e-47 |
| Msa0699300 | Msa1078480 | 0.811316 | 7.442242e-51 | -8.615850e-47 |
| Msa0699300 | Msa1078640 | 0.815542 | 8.762720e-52 | -8.615850e-47 |
| Msa0169710 | Msa0699300 | 0.820835 | 5.560802e-53 | -8.615850e-47 |
| Msa0195030 | Msa0699300 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0315660 | Msa0699300 | 0.802035 | 6.791388e-49 | -8.615850e-47 |
| Msa0562170 | Msa0699300 | 0.819399 | 1.185474e-52 | -8.615850e-47 |
| Msa0569980 | Msa0699300 | -0.810429 | 1.157787e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699300 | MtrunA17_Chr8g0375211 | 99.231 | 130 | 1 | 0 | 25 | 154 | 1 | 130 | 1.91e-91 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699300 | AT4G02620.1 | 87.302 | 126 | 16 | 0 | 25 | 150 | 1 | 126 | 2.14e-79 | 231 |
Find 49 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAGATGGGCTAATTTA+TGG | 0.167977 | 4_4:+69947073 | Msa0699300:three_prime_UTR |
| ATCCTTTGATTGCAGCTTTC+AGG | 0.178093 | 4_4:+69946936 | Msa0699300:three_prime_UTR |
| TACCATAGTTGGGTTTCTTT+TGG | 0.252743 | 4_4:+69945371 | Msa0699300:CDS |
| TTGTCTTCAGCTATTCGATA+TGG | 0.341107 | 4_4:+69944064 | Msa0699300:intron |
| CTCATGATTCAGTTCTTTCA+CGG | 0.364488 | 4_4:+69946862 | Msa0699300:CDS |
| TCCTTTGATTGCAGCTTTCA+GGG | 0.364620 | 4_4:+69946937 | Msa0699300:three_prime_UTR |
| TTTCCACAGGATACCATAGT+TGG | 0.389583 | 4_4:+69945360 | Msa0699300:intron |
| GAAGGGATTTCAAGAATTGC+AGG | 0.394210 | 4_4:-69946816 | None:intergenic |
| ATTTCAAGAATTGCAGGAAC+TGG | 0.410123 | 4_4:-69946810 | None:intergenic |
| GAATCATGAGCAGGATCATA+AGG | 0.423283 | 4_4:-69946849 | None:intergenic |
| AGCCAAAAGAAACCCAACTA+TGG | 0.431491 | 4_4:-69945373 | None:intergenic |
| CTTGAATGATCTGTATTGTT+TGG | 0.433385 | 4_4:+69947024 | Msa0699300:three_prime_UTR |
| ACTTACTTGAATCCACAATA+AGG | 0.438291 | 4_4:-69945434 | None:intergenic |
| TGCAGGTTGCAAATATGATA+AGG | 0.450588 | 4_4:+69946763 | Msa0699300:intron |
| CGGCGGAGCGTGACGGAGAC+GGG | 0.452843 | 4_4:-69943632 | None:intergenic |
| GATGAATTGTTGGCAGGAAT+CGG | 0.453548 | 4_4:-69944098 | None:intergenic |
| GGCAATAAGTGATGAATTGT+TGG | 0.454916 | 4_4:-69944108 | None:intergenic |
| TGACGGAGACGGGAGGAATC+CGG | 0.464286 | 4_4:-69943622 | None:intergenic |
| GGGCTAATTTATGGTTACCT+TGG | 0.465335 | 4_4:+69947082 | Msa0699300:three_prime_UTR |
| GCTTACCTCGTCAGCAATCA+TGG | 0.470639 | 4_4:-69944129 | None:intergenic |
| TCCATCTCATCTGTCGCATC+CGG | 0.474981 | 4_4:+69943657 | Msa0699300:CDS |
| GAAGACAAATTACCTTATTG+TGG | 0.485357 | 4_4:+69945422 | Msa0699300:CDS |
| TTCCACAGGATACCATAGTT+GGG | 0.495606 | 4_4:+69945361 | Msa0699300:intron |
| TTCAATGCTGAATCAGTGGC+AGG | 0.511114 | 4_4:+69946897 | Msa0699300:CDS |
| TCATGATTCAGTTCTTTCAC+GGG | 0.514197 | 4_4:+69946863 | Msa0699300:CDS |
| CCATCTTGAAGATCTATGAC+AGG | 0.531131 | 4_4:-69947061 | None:intergenic |
| AATTGATAATATTTCATCCA+AGG | 0.534028 | 4_4:-69947099 | None:intergenic |
| ACGGCGGAGCGTGACGGAGA+CGG | 0.535709 | 4_4:-69943633 | None:intergenic |
| CATGCAATCTTCAAATCAGA+TGG | 0.539964 | 4_4:-69947163 | None:intergenic |
| GGCAGGAATCGGAACTCTGT+TGG | 0.544048 | 4_4:-69944087 | None:intergenic |
| ATAAGTGATGAATTGTTGGC+AGG | 0.546049 | 4_4:-69944104 | None:intergenic |
| AATCATGAGCAGGATCATAA+GGG | 0.560484 | 4_4:-69946848 | None:intergenic |
| ACCCTGAAAGCTGCAATCAA+AGG | 0.565789 | 4_4:-69946938 | None:intergenic |
| GAAAGAACTGAATCATGAGC+AGG | 0.572900 | 4_4:-69946858 | None:intergenic |
| CTGTCATAGATCTTCAAGAT+GGG | 0.578380 | 4_4:+69947062 | Msa0699300:three_prime_UTR |
| TATTGCCATGATTGCTGACG+AGG | 0.587291 | 4_4:+69944124 | Msa0699300:CDS |
| ATGGAGACGGCGGAGCGTGA+CGG | 0.587931 | 4_4:-69943639 | None:intergenic |
| CCTGTCATAGATCTTCAAGA+TGG | 0.596437 | 4_4:+69947061 | Msa0699300:three_prime_UTR |
| ACCGGATGCGACAGATGAGA+TGG | 0.611335 | 4_4:-69943658 | None:intergenic |
| TCTCTTCAATGCTGAATCAG+TGG | 0.629677 | 4_4:+69946893 | Msa0699300:CDS |
| TGCGACAGATGAGATGGAGA+CGG | 0.641361 | 4_4:-69943652 | None:intergenic |
| AACGACTGTCAAACAAATCG+AGG | 0.646091 | 4_4:+69946061 | Msa0699300:CDS |
| CAAAGAATTCTCAACACGGG+AGG | 0.652854 | 4_4:+69946091 | Msa0699300:CDS |
| CGGAGCGTGACGGAGACGGG+AGG | 0.660477 | 4_4:-69943629 | None:intergenic |
| ATTCAAAGAATTCTCAACAC+GGG | 0.675761 | 4_4:+69946088 | Msa0699300:CDS |
| CATTCAAAGAATTCTCAACA+CGG | 0.678390 | 4_4:+69946087 | Msa0699300:CDS |
| CATGAGCAGGATCATAAGGG+TGG | 0.700765 | 4_4:-69946845 | None:intergenic |
| GACAGATGAGATGGAGACGG+CGG | 0.703991 | 4_4:-69943649 | None:intergenic |
| TGGGAAACGTTGACATACGT+CGG | 0.705364 | 4_4:+69945400 | Msa0699300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAATTTAAATATTAA+TGG | - | chr4_4:69939059-69939078 | None:intergenic | 0.0% |
| !!! | TATTTTTTTAAATATATTAT+CGG | + | chr4_4:69940189-69940208 | Msa0699300:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr4_4:69942619-69942638 | Msa0699300:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr4_4:69942620-69942639 | Msa0699300:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr4_4:69942619-69942638 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr4_4:69942620-69942639 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr4_4:69942619-69942638 | Msa0699300:intron | 0.0% |
| !! | AATAGTATATATATAAAGTA+AGG | + | chr4_4:69939186-69939205 | Msa0699300:intron | 10.0% |
| !! | AAATATTGGATTTAAAAAAT+AGG | - | chr4_4:69939265-69939284 | None:intergenic | 10.0% |
| !! | TATAGTATATATATAAAGTA+AGG | + | chr4_4:69939457-69939476 | Msa0699300:intron | 10.0% |
| !!! | ACTTTTAGAAAAAAAAAAAT+AGG | + | chr4_4:69940506-69940525 | Msa0699300:intron | 10.0% |
| !! | TATTAATTTAATAACGAATA+TGG | + | chr4_4:69940695-69940714 | Msa0699300:intron | 10.0% |
| !! | AAATTAAATAAAATATTCAG+TGG | - | chr4_4:69941104-69941123 | None:intergenic | 10.0% |
| !! | AAGAAAGAAAAAAAATTTAA+TGG | - | chr4_4:69941198-69941217 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTCTTTTTTTT+AGG | + | chr4_4:69941204-69941223 | Msa0699300:intron | 10.0% |
| !!! | ATAAACATTTTTTAAGTATT+CGG | - | chr4_4:69942051-69942070 | None:intergenic | 10.0% |
| !!! | GAATATTGTTTTTTTTTTTT+TGG | - | chr4_4:69942505-69942524 | None:intergenic | 10.0% |
| !! | TATATATATATATATACACA+CGG | - | chr4_4:69942615-69942634 | None:intergenic | 10.0% |
| !! | TATATATATATATACTACTC+CGG | + | chr4_4:69938519-69938538 | Msa0699300:intron | 15.0% |
| !! | TTAAGGATAAAGTAAAAAAA+TGG | - | chr4_4:69938859-69938878 | None:intergenic | 15.0% |
| !! | TTTCTGTTACATAAAATATT+AGG | - | chr4_4:69939360-69939379 | None:intergenic | 15.0% |
| !! | TCTACAACAAATATTTAATT+TGG | + | chr4_4:69939540-69939559 | Msa0699300:intron | 15.0% |
| !! | GAATTCAATAAAAAAAGTTA+AGG | - | chr4_4:69940025-69940044 | None:intergenic | 15.0% |
| !! | AATAGTATATATACAAAGTA+AGG | + | chr4_4:69940119-69940138 | Msa0699300:intron | 15.0% |
| !! | TCAAACAAAAATCTTTAATT+AGG | + | chr4_4:69940625-69940644 | Msa0699300:intron | 15.0% |
| !! | TACATGAAATAATATATAAC+TGG | - | chr4_4:69940655-69940674 | None:intergenic | 15.0% |
| !! | AAATAAAATTTATCAAGGAT+TGG | - | chr4_4:69940887-69940906 | None:intergenic | 15.0% |
| !! | ATTAGAAGAAATAATAGTAT+AGG | - | chr4_4:69941438-69941457 | None:intergenic | 15.0% |
| !! | TTATGAATTATGAATAAGAA+TGG | - | chr4_4:69941701-69941720 | None:intergenic | 15.0% |
| !! | ATAATAAAACAAAATAGGAA+TGG | - | chr4_4:69941739-69941758 | None:intergenic | 15.0% |
| !! | ATACTAGTATTATTATACAA+AGG | + | chr4_4:69942187-69942206 | Msa0699300:intron | 15.0% |
| !! | TACTAGTATTATTATACAAA+GGG | + | chr4_4:69942188-69942207 | Msa0699300:intron | 15.0% |
| !!! | AACGATTGTTTTTATTTTAT+TGG | - | chr4_4:69942321-69942340 | None:intergenic | 15.0% |
| !! | ATATATATATATATACACAC+GGG | - | chr4_4:69942614-69942633 | None:intergenic | 15.0% |
| !! | AGACATTGTATTATATATAT+GGG | - | chr4_4:69943266-69943285 | None:intergenic | 15.0% |
| !! | AAGACATTGTATTATATATA+TGG | - | chr4_4:69943267-69943286 | None:intergenic | 15.0% |
| !!! | GAAAAAAACTTATTTTTTGT+TGG | + | chr4_4:69943312-69943331 | Msa0699300:intron | 15.0% |
| !!! | AATAATAGACATTTTTTTTC+AGG | + | chr4_4:69943351-69943370 | Msa0699300:intron | 15.0% |
| !! | AAAGAATTGAAAATACTATA+AGG | + | chr4_4:69943401-69943420 | Msa0699300:intron | 15.0% |
| !! | GAATTAAAAAATTTACAAGT+TGG | - | chr4_4:69943712-69943731 | None:intergenic | 15.0% |
| !! | GAAAACTCAATTAATAAAAA+AGG | - | chr4_4:69944582-69944601 | None:intergenic | 15.0% |
| !! | ACTAGTTATTCAAATTAATA+GGG | - | chr4_4:69945184-69945203 | None:intergenic | 15.0% |
| !!! | AAAAAATCTAAAATGGAATT+GGG | - | chr4_4:69945265-69945284 | None:intergenic | 15.0% |
| !!! | AAAAAAATCTAAAATGGAAT+TGG | - | chr4_4:69945266-69945285 | None:intergenic | 15.0% |
| !! | TTTACTTACTATTATTTATG+AGG | + | chr4_4:69945469-69945488 | Msa0699300:intron | 15.0% |
| !! | TTACTTACTATTATTTATGA+GGG | + | chr4_4:69945470-69945489 | Msa0699300:intron | 15.0% |
| !! | TATGAAATGTATTAAAGATA+AGG | - | chr4_4:69945730-69945749 | None:intergenic | 15.0% |
| !!! | ATTTTGAAAAGAGAAAAAGT+CGG | - | chr4_4:69938702-69938721 | None:intergenic | 20.0% |
| !!! | TTATTTTCATTGAATGTTGA+GGG | - | chr4_4:69938727-69938746 | None:intergenic | 20.0% |
| !!! | GTTTGTCACAATTTTTTTTA+AGG | - | chr4_4:69938876-69938895 | None:intergenic | 20.0% |
| !! | AAAAATATTGCGAATAAATG+TGG | - | chr4_4:69939505-69939524 | None:intergenic | 20.0% |
| !!! | ATTGATAATTTATAGTGGAA+GGG | - | chr4_4:69940094-69940113 | None:intergenic | 20.0% |
| !!! | GATTGATTGATAATTTATAG+TGG | - | chr4_4:69940099-69940118 | None:intergenic | 20.0% |
| !! | AATTGCAATATCAACATAAT+GGG | - | chr4_4:69940367-69940386 | None:intergenic | 20.0% |
| !! | AGATGCACAAATAAAATTAA+TGG | - | chr4_4:69940790-69940809 | None:intergenic | 20.0% |
| !!! | TCCTTGATAAATTTTATTTG+CGG | + | chr4_4:69940888-69940907 | Msa0699300:intron | 20.0% |
| !! | AGCAGTATATATATAAAGTA+AGG | + | chr4_4:69940978-69940997 | Msa0699300:intron | 20.0% |
| !! | AAAAATATTGAGAATGAATG+TGG | - | chr4_4:69941026-69941045 | None:intergenic | 20.0% |
| !!! | TATAGTTTGTTGAGATATTT+TGG | - | chr4_4:69941155-69941174 | None:intergenic | 20.0% |
| !! | AAAAAACCAATTGAGTAATA+TGG | - | chr4_4:69941269-69941288 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTGAGGAAAAAA+AGG | + | chr4_4:69941283-69941302 | Msa0699300:intron | 20.0% |
| !!! | GATTGTTTTTTTTTTCTTTC+AGG | + | chr4_4:69941525-69941544 | Msa0699300:intron | 20.0% |
| !! | CAGAAGAAAAAAAATAGTAT+AGG | - | chr4_4:69941655-69941674 | None:intergenic | 20.0% |
| !! | ATAATTCATAATTGAGTTTG+TGG | + | chr4_4:69941710-69941729 | Msa0699300:intron | 20.0% |
| !! | ATAATACTAGTATATTTACC+CGG | - | chr4_4:69942180-69942199 | None:intergenic | 20.0% |
| !! | ACTAGTATTATTATACAAAG+GGG | + | chr4_4:69942189-69942208 | Msa0699300:intron | 20.0% |
| !!! | AAACAATCGTTGATAATATA+AGG | + | chr4_4:69942330-69942349 | Msa0699300:intron | 20.0% |
| !! | AGATTTCATACATTTAAATG+TGG | - | chr4_4:69942464-69942483 | None:intergenic | 20.0% |
| !! | AAGAGAATTATTACCATAAA+AGG | - | chr4_4:69943199-69943218 | None:intergenic | 20.0% |
| !!! | ATGGTAATAATTCTCTTTTA+TGG | + | chr4_4:69943202-69943221 | Msa0699300:intron | 20.0% |
| !!! | AATTGATTCATAGTAATCAA+GGG | + | chr4_4:69944003-69944022 | Msa0699300:intron | 20.0% |
| !!! | TAAGAAAGTATATACAACAT+GGG | - | chr4_4:69944160-69944179 | None:intergenic | 20.0% |
| !!! | ATAAGAAAGTATATACAACA+TGG | - | chr4_4:69944161-69944180 | None:intergenic | 20.0% |
| !!! | TTAAAGATCTATTTTGCTAT+TGG | + | chr4_4:69944309-69944328 | Msa0699300:intron | 20.0% |
| !! | TTAATAAAAAAGGAAATCAG+TGG | - | chr4_4:69944572-69944591 | None:intergenic | 20.0% |
| !!! | TTTTTGCTAGAATCTATTTA+AGG | - | chr4_4:69944604-69944623 | None:intergenic | 20.0% |
| !! | TAACAGGATTTAAATGAAAT+AGG | + | chr4_4:69944625-69944644 | Msa0699300:intron | 20.0% |
| !! | AAATACCAGCTTATATAATA+TGG | - | chr4_4:69944800-69944819 | None:intergenic | 20.0% |
| !!! | TGTTTTATTTCCTTATTTCA+GGG | - | chr4_4:69944952-69944971 | None:intergenic | 20.0% |
| !! | CTAGTTATTCAAATTAATAG+GGG | - | chr4_4:69945183-69945202 | None:intergenic | 20.0% |
| !! | CACTAGTTATTCAAATTAAT+AGG | - | chr4_4:69945185-69945204 | None:intergenic | 20.0% |
| !!! | AATTCAATTTTATTTTCCAC+AGG | + | chr4_4:69945347-69945366 | Msa0699300:intron | 20.0% |
| !! | TTAACAGGAAAAAATTGTAT+GGG | - | chr4_4:69945511-69945530 | None:intergenic | 20.0% |
| !! | ATTAACAGGAAAAAATTGTA+TGG | - | chr4_4:69945512-69945531 | None:intergenic | 20.0% |
| !!! | AACACATGTACTATTTTTAT+TGG | - | chr4_4:69945598-69945617 | None:intergenic | 20.0% |
| !!! | TTCAAAACAAATTGATTTGA+CGG | + | chr4_4:69946001-69946020 | Msa0699300:intron | 20.0% |
| !! | ATGAAATATGACTTACAAAT+TGG | - | chr4_4:69946139-69946158 | None:intergenic | 20.0% |
| !! | AATTTGTAAGTCATATTTCA+TGG | + | chr4_4:69946138-69946157 | Msa0699300:intron | 20.0% |
| !! | AACATGTGTTAAACTATAAT+AGG | - | chr4_4:69946299-69946318 | None:intergenic | 20.0% |
| !!! | AAAATGTTGACTAGTTTATA+TGG | + | chr4_4:69946547-69946566 | Msa0699300:intron | 20.0% |
| !!! | AATTGATAATATTTCATCCA+AGG | - | chr4_4:69947102-69947121 | None:intergenic | 20.0% |
| !! | TTTCCAATGATTTGAAACAT+TGG | + | chr4_4:69938449-69938468 | Msa0699300:intron | 25.0% |
| ! | ATTTCTTTCATAATAGTGAC+CGG | - | chr4_4:69938541-69938560 | None:intergenic | 25.0% |
| !! | ATAAAGAAAATAGCCTCTTT+TGG | + | chr4_4:69938675-69938694 | Msa0699300:intron | 25.0% |
| !!! | GTTATTTTCATTGAATGTTG+AGG | - | chr4_4:69938728-69938747 | None:intergenic | 25.0% |
| ! | AAAAATATTGCGAATAAACG+TGG | - | chr4_4:69939234-69939253 | None:intergenic | 25.0% |
| !! | GATTGATTGATGATTTATAG+TGG | - | chr4_4:69939412-69939431 | None:intergenic | 25.0% |
| !! | GATTGATAATTTATAGTGGA+AGG | - | chr4_4:69940095-69940114 | None:intergenic | 25.0% |
| ! | AAAAATATTGCGAATAAACG+TGG | - | chr4_4:69939234-69939253 | None:intergenic | 25.0% |
| ! | CAATTGCAATATCAACATAA+TGG | - | chr4_4:69940368-69940387 | None:intergenic | 25.0% |
| ! | CATTATGTTGATATTGCAAT+TGG | + | chr4_4:69940366-69940385 | Msa0699300:intron | 25.0% |
| !! | TGTACAGAGATATTTTTCTT+AGG | + | chr4_4:69940401-69940420 | Msa0699300:intron | 25.0% |
| !! | ATTAGTAATTTGTGAATACC+TGG | - | chr4_4:69940606-69940625 | None:intergenic | 25.0% |
| ! | ATTTACGAGTGCTTATAATA+AGG | + | chr4_4:69940814-69940833 | Msa0699300:intron | 25.0% |
| !! | AATTTATCAAGGATTGGTAT+GGG | - | chr4_4:69940881-69940900 | None:intergenic | 25.0% |
| !! | AAATTTATCAAGGATTGGTA+TGG | - | chr4_4:69940882-69940901 | None:intergenic | 25.0% |
| ! | TCCGCAAATAAAATTTATCA+AGG | - | chr4_4:69940892-69940911 | None:intergenic | 25.0% |
| ! | TTAACACCATATTACTCAAT+TGG | + | chr4_4:69941260-69941279 | Msa0699300:intron | 25.0% |
| ! | AAAAAGCTTAGATCAAAAGA+AGG | - | chr4_4:69941391-69941410 | None:intergenic | 25.0% |
| ! | TGAAACAGAAACAATAGTAT+AGG | - | chr4_4:69941616-69941635 | None:intergenic | 25.0% |
| !!! | TATACTATTGTTTCTGTTTC+AGG | + | chr4_4:69941615-69941634 | Msa0699300:intron | 25.0% |
| ! | AAATACCTATTGCTAAACTA+CGG | - | chr4_4:69941843-69941862 | None:intergenic | 25.0% |
| ! | CAGAGACAAATATAATTAAC+TGG | - | chr4_4:69942107-69942126 | None:intergenic | 25.0% |
| ! | CAGTTAATTATATTTGTCTC+TGG | + | chr4_4:69942105-69942124 | Msa0699300:intron | 25.0% |
| ! | CATTTAAATGTGGATAAATG+AGG | - | chr4_4:69942454-69942473 | None:intergenic | 25.0% |
| !! | AAAAAGTAGGTCTTTTTACA+GGG | - | chr4_4:69942530-69942549 | None:intergenic | 25.0% |
| !! | AAAAAAGTAGGTCTTTTTAC+AGG | - | chr4_4:69942531-69942550 | None:intergenic | 25.0% |
| ! | CTAAACTAGTTGAAAAAAGT+AGG | - | chr4_4:69942543-69942562 | None:intergenic | 25.0% |
| !!! | CTTTTTTCAACTAGTTTAGT+TGG | + | chr4_4:69942544-69942563 | Msa0699300:intron | 25.0% |
| ! | TCACCTATTAAATGTATAAG+TGG | + | chr4_4:69942572-69942591 | Msa0699300:intron | 25.0% |
| ! | CACCTATTAAATGTATAAGT+GGG | + | chr4_4:69942573-69942592 | Msa0699300:intron | 25.0% |
| ! | TTCCCACTTATACATTTAAT+AGG | - | chr4_4:69942578-69942597 | None:intergenic | 25.0% |
| ! | AAGTAGTTAAATACACCTTA+AGG | - | chr4_4:69942766-69942785 | None:intergenic | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | + | chr4_4:69942808-69942827 | Msa0699300:intron | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr4_4:69942808-69942827 | None:intergenic | 25.0% |
| !! | TTTTAACAACATTCACCTTA+AGG | + | chr4_4:69942894-69942913 | Msa0699300:intron | 25.0% |
| ! | AAGTTGTTAAATACACCTTA+AGG | - | chr4_4:69942912-69942931 | None:intergenic | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+GGG | + | chr4_4:69942955-69942974 | Msa0699300:intron | 25.0% |
| ! | ATATATATGGAAATGCTAAC+CGG | + | chr4_4:69943075-69943094 | Msa0699300:intron | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | + | chr4_4:69943183-69943202 | Msa0699300:intron | 25.0% |
| ! | AATGAATTACGTGTTGAAAA+TGG | - | chr4_4:69943784-69943803 | None:intergenic | 25.0% |
| !!! | AACCTTTTTTTTTCTCGATT+TGG | + | chr4_4:69943882-69943901 | Msa0699300:intron | 25.0% |
| ! | ATCCAAATCGAGAAAAAAAA+AGG | - | chr4_4:69943887-69943906 | None:intergenic | 25.0% |
| !! | GAATTGATTCATAGTAATCA+AGG | + | chr4_4:69944002-69944021 | Msa0699300:intron | 25.0% |
| ! | AATCAGATGATATGATAACT+AGG | + | chr4_4:69944209-69944228 | Msa0699300:intron | 25.0% |
| !! | TATTAGCTAAGATGATTTTG+CGG | - | chr4_4:69944258-69944277 | None:intergenic | 25.0% |
| !! | ACTATTATTGTACATTTTCC+TGG | + | chr4_4:69944376-69944395 | Msa0699300:intron | 25.0% |
| ! | AGATTCTAGCAAAAATTAAC+AGG | + | chr4_4:69944609-69944628 | Msa0699300:intron | 25.0% |
| ! | AAATGAAATAGGAAATTGTG+AGG | + | chr4_4:69944636-69944655 | Msa0699300:intron | 25.0% |
| !! | AAATTTAGTTTCTTTGGATG+AGG | - | chr4_4:69944666-69944685 | None:intergenic | 25.0% |
| !! | AGAGACAAATTTAGTTTCTT+TGG | - | chr4_4:69944672-69944691 | None:intergenic | 25.0% |
| ! | TCTCTGATAAAATTGAAGAA+AGG | + | chr4_4:69944689-69944708 | Msa0699300:intron | 25.0% |
| ! | CTCTGATAAAATTGAAGAAA+GGG | + | chr4_4:69944690-69944709 | Msa0699300:intron | 25.0% |
| ! | TACTTCCATATTATATAAGC+TGG | + | chr4_4:69944792-69944811 | Msa0699300:intron | 25.0% |
| ! | ATACTCCTATTTCATTAACA+AGG | - | chr4_4:69944841-69944860 | None:intergenic | 25.0% |
| !! | TAGATTTGACTTAGAGTAAT+TGG | - | chr4_4:69944906-69944925 | None:intergenic | 25.0% |
| ! | TAGCCAATTACTAGTATAAA+CGG | + | chr4_4:69944924-69944943 | Msa0699300:intron | 25.0% |
| !!! | GTGTTTTATTTCCTTATTTC+AGG | - | chr4_4:69944953-69944972 | None:intergenic | 25.0% |
| ! | AAAATCAGATATAGTTCAGT+CGG | + | chr4_4:69945137-69945156 | Msa0699300:intron | 25.0% |
| ! | TAACAGGAAAAAATTGTATG+GGG | - | chr4_4:69945510-69945529 | None:intergenic | 25.0% |
| ! | TGTATTAAAGATAAGGTTTG+TGG | - | chr4_4:69945723-69945742 | None:intergenic | 25.0% |
| !! | AAACCGTAGAATACTTATTT+TGG | + | chr4_4:69945769-69945788 | Msa0699300:intron | 25.0% |
| !!! | AACCGTAGAATACTTATTTT+GGG | + | chr4_4:69945770-69945789 | Msa0699300:intron | 25.0% |
| ! | TTTATGCAAAGGTTATTAGT+AGG | + | chr4_4:69945806-69945825 | Msa0699300:intron | 25.0% |
| !! | AGGATAAGTAAAAAGTCTTT+TGG | - | chr4_4:69946274-69946293 | None:intergenic | 25.0% |
| ! | GTGTTAAACTATAATAGGTA+AGG | - | chr4_4:69946294-69946313 | None:intergenic | 25.0% |
| !!! | TTTTAATTATCTACTGCATC+AGG | + | chr4_4:69946365-69946384 | Msa0699300:intron | 25.0% |
| !! | ATTTTATGATTGAATCTCAC+TGG | - | chr4_4:69946466-69946485 | None:intergenic | 25.0% |
| ! | GTGAGATTCAATCATAAAAT+TGG | + | chr4_4:69946466-69946485 | Msa0699300:intron | 25.0% |
| ! | TCAGTTATTAGTTGGATATT+TGG | + | chr4_4:69946592-69946611 | Msa0699300:intron | 25.0% |
| ! | TAAATAACCCAAGATTGTAA+CGG | - | chr4_4:69946721-69946740 | None:intergenic | 25.0% |
| ! | TATAATTTCTTTGACTATGC+AGG | + | chr4_4:69946746-69946765 | Msa0699300:intron | 25.0% |
| !! | TGCAAATATGATAAGGTTTT+TGG | + | chr4_4:69946770-69946789 | Msa0699300:CDS | 25.0% |
| !!! | TTGTTTTGCTTTGTACATTA+TGG | + | chr4_4:69946966-69946985 | Msa0699300:three_prime_UTR | 25.0% |
| TCAATCTTCTCTCATTAGTA+TGG | + | chr4_4:69938405-69938424 | Msa0699300:intron | 30.0% | |
| ACACCAATGTTTCAAATCAT+TGG | - | chr4_4:69938455-69938474 | None:intergenic | 30.0% | |
| ! | ATTTGAAACATTGGTGTATC+TGG | + | chr4_4:69938458-69938477 | Msa0699300:intron | 30.0% |
| ! | ATGAGTGTTCATTTTCATAG+TGG | - | chr4_4:69938485-69938504 | None:intergenic | 30.0% |
| ! | TTGTCACACGATATATTTTG+TGG | - | chr4_4:69938817-69938836 | None:intergenic | 30.0% |
| ! | TTCATCATCTCGACTTATTT+TGG | - | chr4_4:69938979-69938998 | None:intergenic | 30.0% |
| GAAGGCTTATAAGAATTGTT+AGG | + | chr4_4:69939758-69939777 | Msa0699300:intron | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | - | chr4_4:69939789-69939808 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr4_4:69939794-69939813 | Msa0699300:intron | 30.0% |
| GAACTTACTGAATACAAAAG+TGG | + | chr4_4:69940231-69940250 | Msa0699300:intron | 30.0% | |
| ! | TAATTTGTGAATACCTGGTT+TGG | - | chr4_4:69940601-69940620 | None:intergenic | 30.0% |
| !!! | CTCAATTGGTTTTTTCATTG+AGG | + | chr4_4:69941274-69941293 | Msa0699300:intron | 30.0% |
| CTGCTCAAAATATGTGATTA+TGG | - | chr4_4:69941353-69941372 | None:intergenic | 30.0% | |
| ! | TCAAAAGAAGGTTTGAGTTT+CGG | - | chr4_4:69941379-69941398 | None:intergenic | 30.0% |
| !! | TCTAAGCTTTTTCTTTCTTC+AGG | + | chr4_4:69941399-69941418 | Msa0699300:intron | 30.0% |
| AAACTTGTAGGTGTTTGTAA+TGG | - | chr4_4:69941575-69941594 | None:intergenic | 30.0% | |
| ATAGTATAGGTGTTAGTTCA+AGG | - | chr4_4:69941603-69941622 | None:intergenic | 30.0% | |
| ATAGTATAGGTGTTAGTTCA+AGG | - | chr4_4:69941603-69941622 | None:intergenic | 30.0% | |
| GATTGACATCCATTCATAAT+TGG | + | chr4_4:69941950-69941969 | Msa0699300:intron | 30.0% | |
| GACATTGCATAATTTATGCA+GGG | + | chr4_4:69942406-69942425 | Msa0699300:intron | 30.0% | |
| ACATTGCATAATTTATGCAG+GGG | + | chr4_4:69942407-69942426 | Msa0699300:intron | 30.0% | |
| !!! | ACACCAACTAGTTTTTATGT+GGG | + | chr4_4:69942721-69942740 | Msa0699300:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | + | chr4_4:69942807-69942826 | Msa0699300:intron | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | - | chr4_4:69942867-69942886 | None:intergenic | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | + | chr4_4:69942867-69942886 | Msa0699300:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr4_4:69942807-69942826 | None:intergenic | 30.0% |
| CACACCTTAATAAAAACTAG+TGG | + | chr4_4:69942954-69942973 | Msa0699300:intron | 30.0% | |
| !!! | ACACCCACTAGTTTTTATTA+AGG | - | chr4_4:69942961-69942980 | None:intergenic | 30.0% |
| ! | TATATATATAGGGGTTTGCT+AGG | - | chr4_4:69942986-69943005 | None:intergenic | 30.0% |
| ACTGGTTAAGGTTATGAAAA+AGG | + | chr4_4:69943108-69943127 | Msa0699300:intron | 30.0% | |
| ATTGAAAACAGAATGCGAAT+TGG | - | chr4_4:69943840-69943859 | None:intergenic | 30.0% | |
| CAACTTGAAAGCTTAACAAT+AGG | - | chr4_4:69943977-69943996 | None:intergenic | 30.0% | |
| ! | AATACAACGAATAGCATTGA+TGG | - | chr4_4:69944045-69944064 | None:intergenic | 30.0% |
| TCTTGAAAGGATCAAATTCA+GGG | + | chr4_4:69944446-69944465 | Msa0699300:intron | 30.0% | |
| TTCAGGGTTTAGAAAATAAG+TGG | + | chr4_4:69944462-69944481 | Msa0699300:intron | 30.0% | |
| TAGAAAATAAGTGGATGGAT+AGG | + | chr4_4:69944471-69944490 | Msa0699300:intron | 30.0% | |
| TGACTTCTTAAGTCATCTTA+TGG | - | chr4_4:69944519-69944538 | None:intergenic | 30.0% | |
| ! | AAAAGGAAATCAGTGGTTTT+AGG | - | chr4_4:69944565-69944584 | None:intergenic | 30.0% |
| ! | GATTGCCTTGTTAATGAAAT+AGG | + | chr4_4:69944833-69944852 | Msa0699300:intron | 30.0% |
| GTTCCGTTTATACTAGTAAT+TGG | - | chr4_4:69944930-69944949 | None:intergenic | 30.0% | |
| !!! | ATTGTATGGATTTTGGCTTT+GGG | - | chr4_4:69944982-69945001 | None:intergenic | 30.0% |
| ! | AACTGTCATTGTATGGATTT+TGG | - | chr4_4:69944989-69945008 | None:intergenic | 30.0% |
| AAAATCCATACAATGACAGT+TGG | + | chr4_4:69944988-69945007 | Msa0699300:intron | 30.0% | |
| GAAGACAAATTACCTTATTG+TGG | + | chr4_4:69945422-69945441 | Msa0699300:CDS | 30.0% | |
| ACTTACTTGAATCCACAATA+AGG | - | chr4_4:69945437-69945456 | None:intergenic | 30.0% | |
| AACAGGAAAAAATTGTATGG+GGG | - | chr4_4:69945509-69945528 | None:intergenic | 30.0% | |
| ACAATCAGAAATAGGTGAAA+AGG | - | chr4_4:69945566-69945585 | None:intergenic | 30.0% | |
| !!! | TTTTCACCTATTTCTGATTG+TGG | + | chr4_4:69945565-69945584 | Msa0699300:intron | 30.0% |
| CATTTCTACACATCCTATAT+AGG | - | chr4_4:69945691-69945710 | None:intergenic | 30.0% | |
| ! | AAGTATTCTACGGTTTTTCT+GGG | - | chr4_4:69945765-69945784 | None:intergenic | 30.0% |
| ! | TAAGTATTCTACGGTTTTTC+TGG | - | chr4_4:69945766-69945785 | None:intergenic | 30.0% |
| TGCCCAAAATAAGTATTCTA+CGG | - | chr4_4:69945775-69945794 | None:intergenic | 30.0% | |
| !!! | TAGAATACTTATTTTGGGCA+TGG | + | chr4_4:69945775-69945794 | Msa0699300:intron | 30.0% |
| !!! | AGAATACTTATTTTGGGCAT+GGG | + | chr4_4:69945776-69945795 | Msa0699300:intron | 30.0% |
| !!! | TGGGCTATTTTTTTATGCAA+AGG | + | chr4_4:69945795-69945814 | Msa0699300:intron | 30.0% |
| TTAATTGGTACTTGAACCTT+GGG | + | chr4_4:69945845-69945864 | Msa0699300:intron | 30.0% | |
| !! | TCAAGTTCTGAAAATATTCC+TGG | + | chr4_4:69945962-69945981 | Msa0699300:intron | 30.0% |
| CATTCAAAGAATTCTCAACA+CGG | + | chr4_4:69946087-69946106 | Msa0699300:CDS | 30.0% | |
| ATTCAAAGAATTCTCAACAC+GGG | + | chr4_4:69946088-69946107 | Msa0699300:CDS | 30.0% | |
| !! | AACAGCCTGAATCATTTTTA+TGG | - | chr4_4:69946164-69946183 | None:intergenic | 30.0% |
| AGTTTAACACATGTTCTGTT+TGG | + | chr4_4:69946304-69946323 | Msa0699300:intron | 30.0% | |
| TGGTAATCAACACTATTGTT+AGG | + | chr4_4:69946324-69946343 | Msa0699300:intron | 30.0% | |
| GGTAATCAACACTATTGTTA+GGG | + | chr4_4:69946325-69946344 | Msa0699300:intron | 30.0% | |
| ! | CATTAACCTCATGTAAGTTT+TGG | - | chr4_4:69946393-69946412 | None:intergenic | 30.0% |
| ATGAGGTTAATGAATAATGC+TGG | + | chr4_4:69946401-69946420 | Msa0699300:intron | 30.0% | |
| AATGAATAATGCTGGATAAC+TGG | + | chr4_4:69946409-69946428 | Msa0699300:intron | 30.0% | |
| !! | TGACTAGTTTATATGGTCAT+TGG | + | chr4_4:69946554-69946573 | Msa0699300:intron | 30.0% |
| ! | ATAGTTTTTAAATCCCAGCT+AGG | - | chr4_4:69946653-69946672 | None:intergenic | 30.0% |
| TAAAAACTATTTCATGCACC+CGG | + | chr4_4:69946663-69946682 | Msa0699300:intron | 30.0% | |
| ! | AAGGTTTTCTAAATAGGAAC+CGG | - | chr4_4:69946685-69946704 | None:intergenic | 30.0% |
| ! | AGCAAGAAGGTTTTCTAAAT+AGG | - | chr4_4:69946691-69946710 | None:intergenic | 30.0% |
| AGAAAACCTTCTTGCTTATT+TGG | + | chr4_4:69946695-69946714 | Msa0699300:intron | 30.0% | |
| CTTGAATGATCTGTATTGTT+TGG | + | chr4_4:69947024-69947043 | Msa0699300:three_prime_UTR | 30.0% | |
| TCTCTTGTAATAGAGACTAG+AGG | + | chr4_4:69938606-69938625 | Msa0699300:intron | 35.0% | |
| CTCTTGTAATAGAGACTAGA+GGG | + | chr4_4:69938607-69938626 | Msa0699300:intron | 35.0% | |
| ATATACACACACATTAGCGT+AGG | + | chr4_4:69939115-69939134 | Msa0699300:intron | 35.0% | |
| CATTAGCGTAGGAAAAAAAG+AGG | + | chr4_4:69939126-69939145 | Msa0699300:intron | 35.0% | |
| GAAGATGCATCTTGTTGATA+TGG | - | chr4_4:69939790-69939809 | None:intergenic | 35.0% | |
| !! | AAAAGACTCATGTTGGTTTG+TGG | + | chr4_4:69939932-69939951 | Msa0699300:intron | 35.0% |
| !! | AAAGACTCATGTTGGTTTGT+GGG | + | chr4_4:69939933-69939952 | Msa0699300:intron | 35.0% |
| !! | ATCAACATAATGGGTACATC+TGG | - | chr4_4:69940358-69940377 | None:intergenic | 35.0% |
| ! | GTTTGGAGTTATTGAACTTC+AGG | - | chr4_4:69940584-69940603 | None:intergenic | 35.0% |
| AAGTTCAATAACTCCAAACC+AGG | + | chr4_4:69940585-69940604 | Msa0699300:intron | 35.0% | |
| ATACTGCTAGTGTATTTACC+CGG | - | chr4_4:69940966-69940985 | None:intergenic | 35.0% | |
| CAATCAGTAAACTTACTCGT+AGG | - | chr4_4:69941510-69941529 | None:intergenic | 35.0% | |
| ATGCCAGAAACAATAGTTCA+AGG | - | chr4_4:69941552-69941571 | None:intergenic | 35.0% | |
| ! | TTCAAGGATCTGAAACTTGT+AGG | - | chr4_4:69941587-69941606 | None:intergenic | 35.0% |
| AATAAGAATGGAGAGAAGAG+CGG | - | chr4_4:69941689-69941708 | None:intergenic | 35.0% | |
| ! | TGAGTGTCATTATAGCAGTA+GGG | + | chr4_4:69941928-69941947 | Msa0699300:intron | 35.0% |
| GTGTGTTCCTATAGACTATT+GGG | - | chr4_4:69942004-69942023 | None:intergenic | 35.0% | |
| TGTGTGTTCCTATAGACTAT+TGG | - | chr4_4:69942005-69942024 | None:intergenic | 35.0% | |
| GCAAAGTTATATGTCTAACC+CGG | + | chr4_4:69942148-69942167 | Msa0699300:intron | 35.0% | |
| CAAAGTTATATGTCTAACCC+GGG | + | chr4_4:69942149-69942168 | Msa0699300:intron | 35.0% | |
| GGACATTGCATAATTTATGC+AGG | + | chr4_4:69942405-69942424 | Msa0699300:intron | 35.0% | |
| ! | TAAATGAGGTGTTCAGAGTT+CGG | - | chr4_4:69942440-69942459 | None:intergenic | 35.0% |
| !!! | CACACCAACTAGTTTTTATG+TGG | + | chr4_4:69942720-69942739 | Msa0699300:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+TGG | - | chr4_4:69942727-69942746 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAGCTACACCTTA+AGG | + | chr4_4:69942748-69942767 | Msa0699300:intron | 35.0% |
| TGTATGTTAGCAACTCCTAT+AGG | - | chr4_4:69942850-69942869 | None:intergenic | 35.0% | |
| ! | ATTTACAAGTTGGAGAGCAA+AGG | - | chr4_4:69943702-69943721 | None:intergenic | 35.0% |
| GCGAATTGGAACAATTTGAT+CGG | - | chr4_4:69943826-69943845 | None:intergenic | 35.0% | |
| TTGTCTTCAGCTATTCGATA+TGG | + | chr4_4:69944064-69944083 | Msa0699300:intron | 35.0% | |
| ATAAGTGATGAATTGTTGGC+AGG | - | chr4_4:69944107-69944126 | None:intergenic | 35.0% | |
| GGCAATAAGTGATGAATTGT+TGG | - | chr4_4:69944111-69944130 | None:intergenic | 35.0% | |
| ACTAGGATGCATGATTGAAT+AGG | + | chr4_4:69944226-69944245 | Msa0699300:intron | 35.0% | |
| CTAGGATGCATGATTGAATA+GGG | + | chr4_4:69944227-69944246 | Msa0699300:intron | 35.0% | |
| !! | TTTTCTTAAGAAGTGTGCAG+TGG | - | chr4_4:69944353-69944372 | None:intergenic | 35.0% |
| ! | TATTGTACATTTTCCTGGTG+TGG | + | chr4_4:69944381-69944400 | Msa0699300:intron | 35.0% |
| GGGTTTAATAGGTTAGGTTT+AGG | + | chr4_4:69944420-69944439 | Msa0699300:intron | 35.0% | |
| ! | TAGGTTTAGGTTCTCTTGAA+AGG | + | chr4_4:69944433-69944452 | Msa0699300:intron | 35.0% |
| CTCTTGAAAGGATCAAATTC+AGG | + | chr4_4:69944445-69944464 | Msa0699300:intron | 35.0% | |
| GGGTTTAGAAAATAAGTGGA+TGG | + | chr4_4:69944466-69944485 | Msa0699300:intron | 35.0% | |
| GAAAGGGATTTAGAGATCAT+AGG | + | chr4_4:69944706-69944725 | Msa0699300:intron | 35.0% | |
| ATAAACGGAACCCTGAAATA+AGG | + | chr4_4:69944939-69944958 | Msa0699300:intron | 35.0% | |
| !!! | TTGTATGGATTTTGGCTTTG+GGG | - | chr4_4:69944981-69945000 | None:intergenic | 35.0% |
| !!! | CATTGTATGGATTTTGGCTT+TGG | - | chr4_4:69944983-69945002 | None:intergenic | 35.0% |
| ! | ACTTTCAGTTTTCAGCCATA+GGG | - | chr4_4:69945081-69945100 | None:intergenic | 35.0% |
| ! | TACTTTCAGTTTTCAGCCAT+AGG | - | chr4_4:69945082-69945101 | None:intergenic | 35.0% |
| ! | TACCATAGTTGGGTTTCTTT+TGG | + | chr4_4:69945371-69945390 | Msa0699300:CDS | 35.0% |
| AACATGATGCACAGATTAAC+AGG | - | chr4_4:69945526-69945545 | None:intergenic | 35.0% | |
| CATCTACCACAATCAGAAAT+AGG | - | chr4_4:69945574-69945593 | None:intergenic | 35.0% | |
| AGACTTACTGTTGTATATCG+TGG | + | chr4_4:69945634-69945653 | Msa0699300:intron | 35.0% | |
| ! | AGTATTCTACGGTTTTTCTG+GGG | - | chr4_4:69945764-69945783 | None:intergenic | 35.0% |
| ACCAATTAACCTCAGTTTCA+GGG | - | chr4_4:69945834-69945853 | None:intergenic | 35.0% | |
| TACCAATTAACCTCAGTTTC+AGG | - | chr4_4:69945835-69945854 | None:intergenic | 35.0% | |
| GTTAATTGGTACTTGAACCT+TGG | + | chr4_4:69945844-69945863 | Msa0699300:intron | 35.0% | |
| AAACTGAGCAAGAAATTACC+AGG | - | chr4_4:69945983-69946002 | None:intergenic | 35.0% | |
| CATGGCCATAAAAATGATTC+AGG | + | chr4_4:69946156-69946175 | Msa0699300:intron | 35.0% | |
| CACTATTGTTAGGGAAAATC+TGG | + | chr4_4:69946334-69946353 | Msa0699300:intron | 35.0% | |
| TATTGTTAGGGAAAATCTGG+AGG | + | chr4_4:69946337-69946356 | Msa0699300:intron | 35.0% | |
| ATTGTTAGGGAAAATCTGGA+GGG | + | chr4_4:69946338-69946357 | Msa0699300:intron | 35.0% | |
| TTGTCGACATTTAAACCCAA+AGG | - | chr4_4:69946511-69946530 | None:intergenic | 35.0% | |
| CTGTTGGATCAGTTATTAGT+TGG | + | chr4_4:69946584-69946603 | Msa0699300:intron | 35.0% | |
| ! | AGGTTTTCTAAATAGGAACC+GGG | - | chr4_4:69946684-69946703 | None:intergenic | 35.0% |
| TTATTTGGCCGTTACAATCT+TGG | + | chr4_4:69946710-69946729 | Msa0699300:intron | 35.0% | |
| TATTTGGCCGTTACAATCTT+GGG | + | chr4_4:69946711-69946730 | Msa0699300:intron | 35.0% | |
| TGCAGGTTGCAAATATGATA+AGG | + | chr4_4:69946763-69946782 | Msa0699300:intron | 35.0% | |
| ATTTCAAGAATTGCAGGAAC+TGG | - | chr4_4:69946813-69946832 | None:intergenic | 35.0% | |
| AATCATGAGCAGGATCATAA+GGG | - | chr4_4:69946851-69946870 | None:intergenic | 35.0% | |
| CTCATGATTCAGTTCTTTCA+CGG | + | chr4_4:69946862-69946881 | Msa0699300:CDS | 35.0% | |
| TCATGATTCAGTTCTTTCAC+GGG | + | chr4_4:69946863-69946882 | Msa0699300:CDS | 35.0% | |
| CTGTCATAGATCTTCAAGAT+GGG | + | chr4_4:69947062-69947081 | Msa0699300:three_prime_UTR | 35.0% | |
| !! | CTTCAAGATGGGCTAATTTA+TGG | + | chr4_4:69947073-69947092 | Msa0699300:three_prime_UTR | 35.0% |
| AGAAAAAGTCGGTCCAAAAG+AGG | - | chr4_4:69938691-69938710 | None:intergenic | 40.0% | |
| TCGGTTCCTCTTATTAACGT+GGG | - | chr4_4:69939679-69939698 | None:intergenic | 40.0% | |
| TTCGGTTCCTCTTATTAACG+TGG | - | chr4_4:69939680-69939699 | None:intergenic | 40.0% | |
| TAAGAGGAACCGAATCACAT+CGG | + | chr4_4:69939686-69939705 | Msa0699300:intron | 40.0% | |
| !!! | TGCTTGACTTGGAGCAATTT+TGG | + | chr4_4:69939850-69939869 | Msa0699300:intron | 40.0% |
| !!! | GCTTGACTTGGAGCAATTTT+GGG | + | chr4_4:69939851-69939870 | Msa0699300:intron | 40.0% |
| !!! | ACTTGGAGCAATTTTGGGAT+GGG | + | chr4_4:69939856-69939875 | Msa0699300:intron | 40.0% |
| !! | AAGACTCATGTTGGTTTGTG+GGG | + | chr4_4:69939934-69939953 | Msa0699300:intron | 40.0% |
| GCAATCCTAAAAAGCAGTCT+GGG | + | chr4_4:69939964-69939983 | Msa0699300:intron | 40.0% | |
| !!! | AACATCCCAGACTGCTTTTT+AGG | - | chr4_4:69939972-69939991 | None:intergenic | 40.0% |
| ! | TATCGGAGTATTAGCTGCAA+AGG | + | chr4_4:69940206-69940225 | Msa0699300:intron | 40.0% |
| ! | ATCGGAGTATTAGCTGCAAA+GGG | + | chr4_4:69940207-69940226 | Msa0699300:intron | 40.0% |
| ACCAATTATACGCAGAGGAA+GGG | + | chr4_4:69940267-69940286 | Msa0699300:intron | 40.0% | |
| CTTCCTGAATATGTGTAACC+CGG | + | chr4_4:69940934-69940953 | Msa0699300:intron | 40.0% | |
| TTCCTGAATATGTGTAACCC+GGG | + | chr4_4:69940935-69940954 | Msa0699300:intron | 40.0% | |
| ATGAATGTGGAAGTGACATG+TGG | - | chr4_4:69941013-69941032 | None:intergenic | 40.0% | |
| GGTCCTTGAACTATTGTTTC+TGG | + | chr4_4:69941546-69941565 | Msa0699300:intron | 40.0% | |
| CTATTGCTAAACTACGGAAC+TGG | - | chr4_4:69941837-69941856 | None:intergenic | 40.0% | |
| CAGTTCCGTAGTTTAGCAAT+AGG | + | chr4_4:69941835-69941854 | Msa0699300:intron | 40.0% | |
| TGTATGTGAACCCAGTATAG+CGG | + | chr4_4:69941891-69941910 | Msa0699300:intron | 40.0% | |
| TTGTGAATGTCCGCTATACT+GGG | - | chr4_4:69941904-69941923 | None:intergenic | 40.0% | |
| ATTGTGAATGTCCGCTATAC+TGG | - | chr4_4:69941905-69941924 | None:intergenic | 40.0% | |
| !! | GTATAGCGGACATTCACAAT+TGG | + | chr4_4:69941905-69941924 | Msa0699300:intron | 40.0% |
| ! | GTGAGTGTCATTATAGCAGT+AGG | + | chr4_4:69941927-69941946 | Msa0699300:intron | 40.0% |
| TGGCATGCACCAATTATGAA+TGG | - | chr4_4:69941962-69941981 | None:intergenic | 40.0% | |
| ATTGGTGCATGCCATTATAG+TGG | + | chr4_4:69941968-69941987 | Msa0699300:intron | 40.0% | |
| CCTATAGACTATTGGGTTCA+CGG | - | chr4_4:69941997-69942016 | None:intergenic | 40.0% | |
| TTGATGTCCCCTAACTCAAT+TGG | + | chr4_4:69942379-69942398 | Msa0699300:intron | 40.0% | |
| TGTCCCTACCAATTGAGTTA+GGG | - | chr4_4:69942390-69942409 | None:intergenic | 40.0% | |
| ATGTCCCTACCAATTGAGTT+AGG | - | chr4_4:69942391-69942410 | None:intergenic | 40.0% | |
| TGCATAATTTATGCAGGGGT+CGG | + | chr4_4:69942411-69942430 | Msa0699300:intron | 40.0% | |
| ! | TATACACACGGGTTTAAAGC+TGG | - | chr4_4:69942603-69942622 | None:intergenic | 40.0% |
| GTATCCTAGCAAATGCCTAT+AGG | + | chr4_4:69942832-69942851 | Msa0699300:intron | 40.0% | |
| AACTCCTATAGGCATTTGCT+AGG | - | chr4_4:69942839-69942858 | None:intergenic | 40.0% | |
| !! | TATATATGGGTGCTGCTAAC+CGG | - | chr4_4:69943253-69943272 | None:intergenic | 40.0% |
| TAGTCGAGTTAAACTCGTTG+AGG | + | chr4_4:69943290-69943309 | Msa0699300:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr4_4:69943426-69943445 | Msa0699300:intron | 40.0% |
| TCCTTAACATGTGTCCTTGA+GGG | - | chr4_4:69943443-69943462 | None:intergenic | 40.0% | |
| TTCCTTAACATGTGTCCTTG+AGG | - | chr4_4:69943444-69943463 | None:intergenic | 40.0% | |
| AAAGGATGAATAGAACGCAC+CGG | - | chr4_4:69943679-69943698 | None:intergenic | 40.0% | |
| GATGAATTGTTGGCAGGAAT+CGG | - | chr4_4:69944101-69944120 | None:intergenic | 40.0% | |
| TAGAAGGCTTGGGGTTTAAT+AGG | + | chr4_4:69944409-69944428 | Msa0699300:intron | 40.0% | |
| GATTGCATCACACATAGTCA+AGG | + | chr4_4:69944759-69944778 | Msa0699300:intron | 40.0% | |
| ACTGCTTGGTACAAATCACA+GGG | - | chr4_4:69944869-69944888 | None:intergenic | 40.0% | |
| ACACTCCAACTGTCATTGTA+TGG | - | chr4_4:69944996-69945015 | None:intergenic | 40.0% | |
| TACAATGACAGTTGGAGTGT+TGG | + | chr4_4:69944996-69945015 | Msa0699300:intron | 40.0% | |
| ACCGCACTAAAATATCCCTA+TGG | + | chr4_4:69945063-69945082 | Msa0699300:intron | 40.0% | |
| !!! | GCCATAGGGATATTTTAGTG+CGG | - | chr4_4:69945067-69945086 | None:intergenic | 40.0% |
| CGGCAATTGAACATTACAAC+TGG | + | chr4_4:69945157-69945176 | Msa0699300:intron | 40.0% | |
| TTTCCACAGGATACCATAGT+TGG | + | chr4_4:69945360-69945379 | Msa0699300:intron | 40.0% | |
| TTCCACAGGATACCATAGTT+GGG | + | chr4_4:69945361-69945380 | Msa0699300:intron | 40.0% | |
| AGCCAAAAGAAACCCAACTA+TGG | - | chr4_4:69945376-69945395 | None:intergenic | 40.0% | |
| ! | ATAGTTGGGTTTCTTTTGGC+TGG | + | chr4_4:69945375-69945394 | Msa0699300:CDS | 40.0% |
| ATCTGTGCATCATGTTCATG+TGG | + | chr4_4:69945530-69945549 | Msa0699300:intron | 40.0% | |
| CAGAAATAGGTGAAAAGGCA+GGG | - | chr4_4:69945561-69945580 | None:intergenic | 40.0% | |
| TCAGAAATAGGTGAAAAGGC+AGG | - | chr4_4:69945562-69945581 | None:intergenic | 40.0% | |
| TGGACCTCGTAAATAAGCAT+GGG | + | chr4_4:69945654-69945673 | Msa0699300:intron | 40.0% | |
| TATCCCCATGCTTATTTACG+AGG | - | chr4_4:69945661-69945680 | None:intergenic | 40.0% | |
| GGGATATGTCTCTCCTATAT+AGG | + | chr4_4:69945675-69945694 | Msa0699300:intron | 40.0% | |
| AGTAATCCAAGTACTACCCA+AGG | - | chr4_4:69945864-69945883 | None:intergenic | 40.0% | |
| AACGACTGTCAAACAAATCG+AGG | + | chr4_4:69946061-69946080 | Msa0699300:CDS | 40.0% | |
| AAGTAGGAACTAACAGTAGC+AGG | - | chr4_4:69946221-69946240 | None:intergenic | 40.0% | |
| CTGTTAGTTCCTACTTCCTA+CGG | + | chr4_4:69946225-69946244 | Msa0699300:intron | 40.0% | |
| ACGTAATAAGCTGATGTCTC+AGG | - | chr4_4:69946251-69946270 | None:intergenic | 40.0% | |
| CAGGTTCCAAAACTTACATG+AGG | + | chr4_4:69946384-69946403 | Msa0699300:intron | 40.0% | |
| TTCTTTCGATAGCCATCCTT+TGG | + | chr4_4:69946492-69946511 | Msa0699300:intron | 40.0% | |
| TCTTTCGATAGCCATCCTTT+GGG | + | chr4_4:69946493-69946512 | Msa0699300:intron | 40.0% | |
| CGACATTTAAACCCAAAGGA+TGG | - | chr4_4:69946507-69946526 | None:intergenic | 40.0% | |
| CAATGGCTGAATGAGCTAAA+AGG | - | chr4_4:69946624-69946643 | None:intergenic | 40.0% | |
| TAACGGCCAAATAAGCAAGA+AGG | - | chr4_4:69946704-69946723 | None:intergenic | 40.0% | |
| GAAGGGATTTCAAGAATTGC+AGG | - | chr4_4:69946819-69946838 | None:intergenic | 40.0% | |
| ! | CATAAGGGTGGTCTTTTGAA+GGG | - | chr4_4:69946836-69946855 | None:intergenic | 40.0% |
| ! | TCATAAGGGTGGTCTTTTGA+AGG | - | chr4_4:69946837-69946856 | None:intergenic | 40.0% |
| GAATCATGAGCAGGATCATA+AGG | - | chr4_4:69946852-69946871 | None:intergenic | 40.0% | |
| GAAAGAACTGAATCATGAGC+AGG | - | chr4_4:69946861-69946880 | None:intergenic | 40.0% | |
| TCTCTTCAATGCTGAATCAG+TGG | + | chr4_4:69946893-69946912 | Msa0699300:CDS | 40.0% | |
| ATCCTTTGATTGCAGCTTTC+AGG | + | chr4_4:69946936-69946955 | Msa0699300:three_prime_UTR | 40.0% | |
| TCCTTTGATTGCAGCTTTCA+GGG | + | chr4_4:69946937-69946956 | Msa0699300:three_prime_UTR | 40.0% | |
| CCATCTTGAAGATCTATGAC+AGG | - | chr4_4:69947064-69947083 | None:intergenic | 40.0% | |
| CCTGTCATAGATCTTCAAGA+TGG | + | chr4_4:69947061-69947080 | Msa0699300:three_prime_UTR | 40.0% | |
| GGGCTAATTTATGGTTACCT+TGG | + | chr4_4:69947082-69947101 | Msa0699300:three_prime_UTR | 40.0% | |
| ATAAACGTGGAAGTGACACG+TGG | - | chr4_4:69939221-69939240 | None:intergenic | 45.0% | |
| ! | TTTTTGTAACACCCACGACG+TGG | + | chr4_4:69939582-69939601 | Msa0699300:intron | 45.0% |
| AACCTTTCGTATCCAACTGG+CGG | - | chr4_4:69939619-69939638 | None:intergenic | 45.0% | |
| TTAACGTGGGGTCATCCTTA+CGG | - | chr4_4:69939666-69939685 | None:intergenic | 45.0% | |
| GATGACCCCACGTTAATAAG+AGG | + | chr4_4:69939670-69939689 | Msa0699300:intron | 45.0% | |
| CGGTTCCTCTTATTAACGTG+GGG | - | chr4_4:69939678-69939697 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGATT+CGG | - | chr4_4:69939698-69939717 | None:intergenic | 45.0% | |
| CGAATCACATCGGAATGAGA+GGG | + | chr4_4:69939696-69939715 | Msa0699300:intron | 45.0% | |
| CATGTAGTCCCATACCTACA+CGG | - | chr4_4:69939731-69939750 | None:intergenic | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | + | chr4_4:69939736-69939755 | Msa0699300:intron | 45.0% | |
| GCTTAACTGCGGAGTTCTTA+TGG | - | chr4_4:69939829-69939848 | None:intergenic | 45.0% | |
| AAGTCAAGCACGCTTAACTG+CGG | - | chr4_4:69939840-69939859 | None:intergenic | 45.0% | |
| !! | GACTTGGAGCAATTTTGGGA+TGG | + | chr4_4:69939855-69939874 | Msa0699300:intron | 45.0% |
| CACGCTGAAAAGACTCATGT+TGG | + | chr4_4:69939925-69939944 | Msa0699300:intron | 45.0% | |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | + | chr4_4:69939942-69939961 | Msa0699300:intron | 45.0% |
| GGCAATCCTAAAAAGCAGTC+TGG | + | chr4_4:69939963-69939982 | Msa0699300:intron | 45.0% | |
| ATAAACGTGGAAGTGACACG+TGG | - | chr4_4:69939221-69939240 | None:intergenic | 45.0% | |
| ! | GCGTATAATTGGTGGTTGGT+TGG | - | chr4_4:69940260-69940279 | None:intergenic | 45.0% |
| ! | CTCTGCGTATAATTGGTGGT+TGG | - | chr4_4:69940264-69940283 | None:intergenic | 45.0% |
| CAACCACCAATTATACGCAG+AGG | + | chr4_4:69940262-69940281 | Msa0699300:intron | 45.0% | |
| CTTCCTCTGCGTATAATTGG+TGG | - | chr4_4:69940268-69940287 | None:intergenic | 45.0% | |
| CACCAATTATACGCAGAGGA+AGG | + | chr4_4:69940266-69940285 | Msa0699300:intron | 45.0% | |
| TCCCTTCCTCTGCGTATAAT+TGG | - | chr4_4:69940271-69940290 | None:intergenic | 45.0% | |
| GAAACTCACGTGCACACTAT+CGG | + | chr4_4:69940291-69940310 | Msa0699300:intron | 45.0% | |
| GTTCACGGTGTCCACTATAA+TGG | - | chr4_4:69941982-69942001 | None:intergenic | 45.0% | |
| CCGTGAACCCAATAGTCTAT+AGG | + | chr4_4:69941994-69942013 | Msa0699300:intron | 45.0% | |
| TGTCCCCTAACTCAATTGGT+AGG | + | chr4_4:69942383-69942402 | Msa0699300:intron | 45.0% | |
| GTCCCCTAACTCAATTGGTA+GGG | + | chr4_4:69942384-69942403 | Msa0699300:intron | 45.0% | |
| GTCCCTACCAATTGAGTTAG+GGG | - | chr4_4:69942389-69942408 | None:intergenic | 45.0% | |
| GCATAATTTATGCAGGGGTC+GGG | + | chr4_4:69942412-69942431 | Msa0699300:intron | 45.0% | |
| CATAATTTATGCAGGGGTCG+GGG | + | chr4_4:69942413-69942432 | Msa0699300:intron | 45.0% | |
| TATACTTAACCAGTTCCCCG+AGG | + | chr4_4:69943225-69943244 | Msa0699300:intron | 45.0% | |
| ! | CAAGTTGGAGAGCAAAGGAA+AGG | - | chr4_4:69943697-69943716 | None:intergenic | 45.0% |
| TATTGCCATGATTGCTGACG+AGG | + | chr4_4:69944124-69944143 | Msa0699300:CDS | 45.0% | |
| ! | TGTGGAGTACTAGAAGGCTT+GGG | + | chr4_4:69944399-69944418 | Msa0699300:intron | 45.0% |
| GGCTTGGGGTTTAATAGGTT+AGG | + | chr4_4:69944414-69944433 | Msa0699300:intron | 45.0% | |
| ATGGATAGGTTCTCGAGGAA+GGG | + | chr4_4:69944485-69944504 | Msa0699300:intron | 45.0% | |
| TGCATCACACATAGTCAAGG+AGG | + | chr4_4:69944762-69944781 | Msa0699300:intron | 45.0% | |
| GACTGCTTGGTACAAATCAC+AGG | - | chr4_4:69944870-69944889 | None:intergenic | 45.0% | |
| !!! | TATTTTAGTGCGGTGCTGCT+AGG | - | chr4_4:69945057-69945076 | None:intergenic | 45.0% |
| AACCCAACTATGGTATCCTG+TGG | - | chr4_4:69945366-69945385 | None:intergenic | 45.0% | |
| TGGGAAACGTTGACATACGT+CGG | + | chr4_4:69945400-69945419 | Msa0699300:CDS | 45.0% | |
| GTGGACCTCGTAAATAAGCA+TGG | + | chr4_4:69945653-69945672 | Msa0699300:intron | 45.0% | |
| GGACCTCGTAAATAAGCATG+GGG | + | chr4_4:69945655-69945674 | Msa0699300:intron | 45.0% | |
| GCCCTGAAACTGAGGTTAAT+TGG | + | chr4_4:69945830-69945849 | Msa0699300:intron | 45.0% | |
| CTTGAACCTTGGGTAGTACT+TGG | + | chr4_4:69945855-69945874 | Msa0699300:intron | 45.0% | |
| CAAAGAATTCTCAACACGGG+AGG | + | chr4_4:69946091-69946110 | Msa0699300:CDS | 45.0% | |
| GGAACTAACAGTAGCAGGTA+TGG | - | chr4_4:69946216-69946235 | None:intergenic | 45.0% | |
| TCTCACTGGTACTGTCACAT+TGG | - | chr4_4:69946452-69946471 | None:intergenic | 45.0% | |
| !! | GGTCATTGGTTTCTCACTGT+TGG | + | chr4_4:69946568-69946587 | Msa0699300:intron | 45.0% |
| GGCTGAATGAGCTAAAAGGA+CGG | - | chr4_4:69946620-69946639 | None:intergenic | 45.0% | |
| AGCCATTGTGATATCCTAGC+TGG | + | chr4_4:69946636-69946655 | Msa0699300:intron | 45.0% | |
| GCCATTGTGATATCCTAGCT+GGG | + | chr4_4:69946637-69946656 | Msa0699300:intron | 45.0% | |
| TCCCAGCTAGGATATCACAA+TGG | - | chr4_4:69946641-69946660 | None:intergenic | 45.0% | |
| TTCAATGCTGAATCAGTGGC+AGG | + | chr4_4:69946897-69946916 | Msa0699300:CDS | 45.0% | |
| ACCCTGAAAGCTGCAATCAA+AGG | - | chr4_4:69946941-69946960 | None:intergenic | 45.0% | |
| !! | ATTTATGTAATATTAAATAT+TGG | - | chr4_4:69939279-69939298 | None:intergenic | 5.0% |
| !!! | TTTATTATTTCTTTATATTT+TGG | + | chr4_4:69940483-69940502 | Msa0699300:intron | 5.0% |
| !! | TTTATATATATAATATAAGA+TGG | + | chr4_4:69941476-69941495 | Msa0699300:intron | 5.0% |
| !! | TAATAATAATAAAACAAAAT+AGG | - | chr4_4:69941744-69941763 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr4_4:69942995-69943014 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAATCTAAAA+TGG | - | chr4_4:69945272-69945291 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTGTAAT+TGG | + | chr4_4:69945282-69945301 | Msa0699300:intron | 5.0% |
| GATATCGAAAGCCACGTCGT+GGG | - | chr4_4:69939596-69939615 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCAACTGGC+GGG | - | chr4_4:69939618-69939637 | None:intergenic | 50.0% | |
| GGGAACCTTTCGTATCCAAC+TGG | - | chr4_4:69939622-69939641 | None:intergenic | 50.0% | |
| ATAGTGTCCGTTCCAACTGG+CGG | - | chr4_4:69939643-69939662 | None:intergenic | 50.0% | |
| TGGAACGGACACTATCCGTA+AGG | + | chr4_4:69939648-69939667 | Msa0699300:intron | 50.0% | |
| CCGAATCACATCGGAATGAG+AGG | + | chr4_4:69939695-69939714 | Msa0699300:intron | 50.0% | |
| ACATCGGAATGAGAGGGATC+CGG | + | chr4_4:69939702-69939721 | Msa0699300:intron | 50.0% | |
| CGTGTAGGTATGGGACTACA+TGG | + | chr4_4:69939729-69939748 | Msa0699300:intron | 50.0% | |
| GGGACTACATGGTTGAAGGA+AGG | + | chr4_4:69939740-69939759 | Msa0699300:intron | 50.0% | |
| GCAGTTAAGCGTGCTTGACT+TGG | + | chr4_4:69939839-69939858 | Msa0699300:intron | 50.0% | |
| !!! | TTTTGGGATGGGTGACCTAC+CGG | + | chr4_4:69939867-69939886 | Msa0699300:intron | 50.0% |
| TGCCCGGGTTACACATATTC+AGG | - | chr4_4:69940940-69940959 | None:intergenic | 50.0% | |
| TATATTTACCCGGCGTTGCC+CGG | - | chr4_4:69942170-69942189 | None:intergenic | 50.0% | |
| ATAACCTTAACCAGTGCCCC+GGG | - | chr4_4:69943103-69943122 | None:intergenic | 50.0% | |
| CATAACCTTAACCAGTGCCC+CGG | - | chr4_4:69943104-69943123 | None:intergenic | 50.0% | |
| GCCCTCAAGGACACATGTTA+AGG | + | chr4_4:69943439-69943458 | Msa0699300:intron | 50.0% | |
| !! | ACTAGCTTTGAGAGTGCGTG+TGG | + | chr4_4:69943576-69943595 | Msa0699300:intron | 50.0% |
| !! | CTAGCTTTGAGAGTGCGTGT+GGG | + | chr4_4:69943577-69943596 | Msa0699300:intron | 50.0% |
| TAGCAGCTCTCGAAACAGAC+CGG | + | chr4_4:69943603-69943622 | Msa0699300:intron | 50.0% | |
| TGCGACAGATGAGATGGAGA+CGG | - | chr4_4:69943655-69943674 | None:intergenic | 50.0% | |
| TCCATCTCATCTGTCGCATC+CGG | + | chr4_4:69943657-69943676 | Msa0699300:CDS | 50.0% | |
| GCTTACCTCGTCAGCAATCA+TGG | - | chr4_4:69944132-69944151 | None:intergenic | 50.0% | |
| ! | TCCTGGTGTGGAGTACTAGA+AGG | + | chr4_4:69944393-69944412 | Msa0699300:intron | 50.0% |
| ! | GTGTGGAGTACTAGAAGGCT+TGG | + | chr4_4:69944398-69944417 | Msa0699300:intron | 50.0% |
| ! | GTGGAGTACTAGAAGGCTTG+GGG | + | chr4_4:69944400-69944419 | Msa0699300:intron | 50.0% |
| AGTGGATGGATAGGTTCTCG+AGG | + | chr4_4:69944480-69944499 | Msa0699300:intron | 50.0% | |
| GATGGATAGGTTCTCGAGGA+AGG | + | chr4_4:69944484-69944503 | Msa0699300:intron | 50.0% | |
| ! | ACCAAGCAGTCTGAAACTGC+AGG | + | chr4_4:69944879-69944898 | Msa0699300:intron | 50.0% |
| ACCTGCAGTTTCAGACTGCT+TGG | - | chr4_4:69944883-69944902 | None:intergenic | 50.0% | |
| !! | TGGGTTTCTTTTGGCTGGAG+TGG | + | chr4_4:69945380-69945399 | Msa0699300:CDS | 50.0% |
| !! | GGGTTTCTTTTGGCTGGAGT+GGG | + | chr4_4:69945381-69945400 | Msa0699300:CDS | 50.0% |
| TAGTAGGTGCCCTGAAACTG+AGG | + | chr4_4:69945822-69945841 | Msa0699300:intron | 50.0% | |
| CATGAGCAGGATCATAAGGG+TGG | - | chr4_4:69946848-69946867 | None:intergenic | 50.0% | |
| GGATATCGAAAGCCACGTCG+TGG | - | chr4_4:69939597-69939616 | None:intergenic | 55.0% | |
| GCTTTCGATATCCCGCCAGT+TGG | + | chr4_4:69939604-69939623 | Msa0699300:intron | 55.0% | |
| TCCCGCCAGTTGGATACGAA+AGG | + | chr4_4:69939614-69939633 | Msa0699300:intron | 55.0% | |
| TACGAAAGGTTCCCGCCAGT+TGG | + | chr4_4:69939628-69939647 | Msa0699300:intron | 55.0% | |
| AAGGTTCCCGCCAGTTGGAA+CGG | + | chr4_4:69939633-69939652 | Msa0699300:intron | 55.0% | |
| TAGTGTCCGTTCCAACTGGC+GGG | - | chr4_4:69939642-69939661 | None:intergenic | 55.0% | |
| CGGATAGTGTCCGTTCCAAC+TGG | - | chr4_4:69939646-69939665 | None:intergenic | 55.0% | |
| ! | TTTGGGATGGGTGACCTACC+GGG | + | chr4_4:69939868-69939887 | Msa0699300:intron | 55.0% |
| TGACCTACCGGGAAGTTTCC+CGG | + | chr4_4:69939879-69939898 | Msa0699300:intron | 55.0% | |
| TTACCGGGAAACTTCCCGGT+AGG | - | chr4_4:69939885-69939904 | None:intergenic | 55.0% | |
| ACGCTTACCGGGAAACTTCC+CGG | - | chr4_4:69939889-69939908 | None:intergenic | 55.0% | |
| TGTATTTACCCGGCGTTGCC+CGG | - | chr4_4:69940956-69940975 | None:intergenic | 55.0% | |
| ATATTTACCCGGCGTTGCCC+GGG | - | chr4_4:69942169-69942188 | None:intergenic | 55.0% | |
| TGGAAATGCTAACCGGTGCC+CGG | + | chr4_4:69943082-69943101 | Msa0699300:intron | 55.0% | |
| GACAGATGAGATGGAGACGG+CGG | - | chr4_4:69943652-69943671 | None:intergenic | 55.0% | |
| ACCGGATGCGACAGATGAGA+TGG | - | chr4_4:69943661-69943680 | None:intergenic | 55.0% | |
| GGCAGGAATCGGAACTCTGT+TGG | - | chr4_4:69944090-69944109 | None:intergenic | 55.0% | |
| GCCTTCTAGTACTCCACACC+AGG | - | chr4_4:69944397-69944416 | None:intergenic | 55.0% | |
| TGTCTCAGGCCGTAGGAAGT+AGG | - | chr4_4:69946237-69946256 | None:intergenic | 55.0% | |
| AAGCTGATGTCTCAGGCCGT+AGG | - | chr4_4:69946244-69946263 | None:intergenic | 55.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | + | chr4_4:69939705-69939724 | Msa0699300:intron | 60.0% | |
| ATCCGGAGGCCGTGTAGGTA+TGG | + | chr4_4:69939719-69939738 | Msa0699300:intron | 60.0% | |
| TCCGGAGGCCGTGTAGGTAT+GGG | + | chr4_4:69939720-69939739 | Msa0699300:intron | 60.0% | |
| TCCCATACCTACACGGCCTC+CGG | - | chr4_4:69939724-69939743 | None:intergenic | 60.0% | |
| TCCTCACTCGCACGCTTACC+GGG | - | chr4_4:69939900-69939919 | None:intergenic | 60.0% | |
| GTCCTCACTCGCACGCTTAC+CGG | - | chr4_4:69939901-69939920 | None:intergenic | 60.0% | |
| ATGTGTAACCCGGGCAACGC+CGG | + | chr4_4:69940944-69940963 | Msa0699300:intron | 60.0% | |
| GTATTTACCCGGCGTTGCCC+GGG | - | chr4_4:69940955-69940974 | None:intergenic | 60.0% | |
| ATGTCTAACCCGGGCAACGC+CGG | + | chr4_4:69942158-69942177 | Msa0699300:intron | 60.0% | |
| GGAAATGCTAACCGGTGCCC+GGG | + | chr4_4:69943083-69943102 | Msa0699300:intron | 60.0% | |
| GAAATGCTAACCGGTGCCCG+GGG | + | chr4_4:69943084-69943103 | Msa0699300:intron | 60.0% | |
| TAACCAGTTCCCCGAGGCAC+CGG | + | chr4_4:69943231-69943250 | Msa0699300:intron | 60.0% | |
| TGACGGAGACGGGAGGAATC+CGG | - | chr4_4:69943625-69943644 | None:intergenic | 60.0% | |
| TCCCGGTAAGCGTGCGAGTG+AGG | + | chr4_4:69939896-69939915 | Msa0699300:intron | 65.0% | |
| TGTGTAACCCGGGCAACGCC+GGG | + | chr4_4:69940945-69940964 | Msa0699300:intron | 65.0% | |
| TGTCTAACCCGGGCAACGCC+GGG | + | chr4_4:69942159-69942178 | Msa0699300:intron | 65.0% | |
| TTAACCAGTGCCCCGGGCAC+CGG | - | chr4_4:69943097-69943116 | None:intergenic | 65.0% | |
| TAACCGGTGCCTCGGGGAAC+TGG | - | chr4_4:69943237-69943256 | None:intergenic | 65.0% | |
| TGCTGCTAACCGGTGCCTCG+GGG | - | chr4_4:69943243-69943262 | None:intergenic | 65.0% | |
| ! | GTGCTGCTAACCGGTGCCTC+GGG | - | chr4_4:69943244-69943263 | None:intergenic | 65.0% |
| !! | GGTGCTGCTAACCGGTGCCT+CGG | - | chr4_4:69943245-69943264 | None:intergenic | 65.0% |
| ATGGAGACGGCGGAGCGTGA+CGG | - | chr4_4:69943642-69943661 | None:intergenic | 65.0% | |
| GAGGGATCCGGAGGCCGTGT+AGG | + | chr4_4:69939714-69939733 | Msa0699300:intron | 70.0% | |
| !! | GGTGCCCGGGGCACTGGTTA+AGG | + | chr4_4:69943096-69943115 | Msa0699300:intron | 70.0% |
| ! | ACGGCGGAGCGTGACGGAGA+CGG | - | chr4_4:69943636-69943655 | None:intergenic | 70.0% |
| CTAACCGGTGCCCGGGGCAC+TGG | + | chr4_4:69943090-69943109 | Msa0699300:intron | 75.0% | |
| ! | CGGAGCGTGACGGAGACGGG+AGG | - | chr4_4:69943632-69943651 | None:intergenic | 75.0% |
| ! | CGGCGGAGCGTGACGGAGAC+GGG | - | chr4_4:69943635-69943654 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69938372 | 69947178 | 69938372 | ID=Msa0699300;Name=Msa0699300 |
| chr4_4 | mRNA | 69938372 | 69947178 | 69938372 | ID=Msa0699300-mRNA-1;Parent=Msa0699300;Name=Msa0699300-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.8|0.66|0.83|0.8|0.66|6|246|154 |
| chr4_4 | exon | 69938372 | 69938376 | 69938372 | ID=Msa0699300-mRNA-1:exon:21064;Parent=Msa0699300-mRNA-1 |
| chr4_4 | exon | 69943621 | 69943678 | 69943621 | ID=Msa0699300-mRNA-1:exon:21065;Parent=Msa0699300-mRNA-1 |
| chr4_4 | exon | 69944074 | 69944145 | 69944074 | ID=Msa0699300-mRNA-1:exon:21066;Parent=Msa0699300-mRNA-1 |
| chr4_4 | exon | 69945369 | 69945450 | 69945369 | ID=Msa0699300-mRNA-1:exon:21067;Parent=Msa0699300-mRNA-1 |
| chr4_4 | exon | 69946060 | 69946142 | 69946060 | ID=Msa0699300-mRNA-1:exon:21068;Parent=Msa0699300-mRNA-1 |
| chr4_4 | exon | 69946768 | 69947178 | 69946768 | ID=Msa0699300-mRNA-1:exon:21069;Parent=Msa0699300-mRNA-1 |
| chr4_4 | CDS | 69938372 | 69938376 | 69938372 | ID=Msa0699300-mRNA-1:cds;Parent=Msa0699300-mRNA-1 |
| chr4_4 | CDS | 69943621 | 69943678 | 69943621 | ID=Msa0699300-mRNA-1:cds;Parent=Msa0699300-mRNA-1 |
| chr4_4 | CDS | 69944074 | 69944145 | 69944074 | ID=Msa0699300-mRNA-1:cds;Parent=Msa0699300-mRNA-1 |
| chr4_4 | CDS | 69945369 | 69945450 | 69945369 | ID=Msa0699300-mRNA-1:cds;Parent=Msa0699300-mRNA-1 |
| chr4_4 | CDS | 69946060 | 69946142 | 69946060 | ID=Msa0699300-mRNA-1:cds;Parent=Msa0699300-mRNA-1 |
| chr4_4 | CDS | 69946768 | 69946932 | 69946768 | ID=Msa0699300-mRNA-1:cds;Parent=Msa0699300-mRNA-1 |
| chr4_4 | three_prime_UTR | 69946933 | 69947178 | 69946933 | ID=Msa0699300-mRNA-1:three_prime_utr;Parent=Msa0699300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
