Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1078480 | XP_024625911.1 | 98.371 | 307 | 3 | 1 | 1 | 307 | 1 | 305 | 0.0 | 572 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1078480 | sp|Q9FYB7|RSZ32_ARATH | 64.706 | 255 | 66 | 5 | 1 | 238 | 1 | 248 | 3.49e-85 | 260 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1078480 | A0A396HBT0 | 98.371 | 307 | 3 | 1 | 1 | 307 | 1 | 305 | 0.0 | 572 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0071640 | Msa1078480 | 0.814894 | 1.221107e-51 | -8.615850e-47 |
Msa0699300 | Msa1078480 | 0.811316 | 7.442242e-51 | -8.615850e-47 |
Msa0169710 | Msa1078480 | 0.841873 | 3.649374e-58 | -8.615850e-47 |
Msa0183840 | Msa1078480 | 0.811501 | 6.784229e-51 | -8.615850e-47 |
Msa0195030 | Msa1078480 | 0.832889 | 7.305734e-56 | -8.615850e-47 |
Msa0237180 | Msa1078480 | 0.822175 | 2.726680e-53 | -8.615850e-47 |
Msa0376850 | Msa1078480 | 0.818519 | 1.879441e-52 | -8.615850e-47 |
Msa1078480 | Msa1078640 | 0.995257 | 1.694014e-214 | -8.615850e-47 |
Msa1078480 | Msa1102090 | 0.831274 | 1.831417e-55 | -8.615850e-47 |
Msa1078480 | Msa1169470 | 0.919352 | 5.012534e-87 | -8.615850e-47 |
Msa0274940 | Msa1078480 | 0.827783 | 1.292711e-54 | -8.615850e-47 |
Msa0315660 | Msa1078480 | 0.829715 | 4.407736e-55 | -8.615850e-47 |
Msa0516830 | Msa1078480 | 0.817206 | 3.718474e-52 | -8.615850e-47 |
Msa0526490 | Msa1078480 | -0.814119 | 1.811804e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1078480 | MtrunA17_Chr7g0263341 | 98.371 | 307 | 3 | 1 | 1 | 307 | 1 | 305 | 0.0 | 572 |
Msa1078480 | MtrunA17_Chr1g0192221 | 51.190 | 84 | 35 | 2 | 13 | 91 | 40 | 122 | 9.18e-16 | 76.3 |
Msa1078480 | MtrunA17_Chr7g0269331 | 46.429 | 84 | 39 | 2 | 13 | 91 | 9 | 91 | 1.31e-12 | 67.0 |
Msa1078480 | MtrunA17_Chr8g0357591 | 33.621 | 116 | 61 | 4 | 13 | 120 | 245 | 352 | 2.05e-11 | 64.7 |
Msa1078480 | MtrunA17_Chr7g0272311 | 44.595 | 74 | 36 | 1 | 13 | 81 | 9 | 82 | 8.13e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1078480 | AT3G53500.2 | 64.706 | 255 | 66 | 5 | 1 | 238 | 1 | 248 | 3.55e-86 | 260 |
Msa1078480 | AT2G37340.1 | 81.457 | 151 | 22 | 1 | 1 | 151 | 1 | 145 | 6.10e-86 | 260 |
Msa1078480 | AT2G37340.5 | 78.182 | 110 | 18 | 1 | 42 | 151 | 1 | 104 | 1.38e-57 | 186 |
Msa1078480 | AT2G37340.3 | 78.182 | 110 | 18 | 1 | 42 | 151 | 1 | 104 | 1.38e-57 | 186 |
Msa1078480 | AT3G53500.1 | 75.000 | 120 | 23 | 2 | 42 | 160 | 1 | 114 | 1.88e-57 | 185 |
Msa1078480 | AT3G53500.3 | 75.000 | 120 | 23 | 2 | 42 | 160 | 1 | 114 | 1.88e-57 | 185 |
Msa1078480 | AT2G37340.2 | 77.451 | 102 | 17 | 1 | 50 | 151 | 20 | 115 | 1.90e-51 | 171 |
Msa1078480 | AT2G37340.6 | 77.451 | 102 | 17 | 1 | 50 | 151 | 20 | 115 | 1.90e-51 | 171 |
Msa1078480 | AT2G37340.4 | 77.451 | 102 | 17 | 1 | 50 | 151 | 20 | 115 | 1.90e-51 | 171 |
Msa1078480 | AT4G02430.1 | 50.000 | 82 | 36 | 1 | 13 | 89 | 9 | 90 | 1.05e-15 | 74.3 |
Msa1078480 | AT1G09140.3 | 50.649 | 77 | 33 | 1 | 10 | 81 | 6 | 82 | 4.03e-15 | 73.9 |
Msa1078480 | AT1G09140.1 | 50.649 | 77 | 33 | 1 | 10 | 81 | 6 | 82 | 4.59e-15 | 74.3 |
Msa1078480 | AT1G09140.2 | 50.649 | 77 | 33 | 1 | 10 | 81 | 6 | 82 | 5.42e-15 | 73.9 |
Msa1078480 | AT4G02430.3 | 50.000 | 82 | 36 | 1 | 13 | 89 | 9 | 90 | 7.25e-15 | 73.6 |
Msa1078480 | AT4G02430.4 | 50.000 | 82 | 36 | 1 | 13 | 89 | 9 | 90 | 8.07e-15 | 73.9 |
Msa1078480 | AT1G02840.1 | 48.780 | 82 | 37 | 1 | 13 | 89 | 9 | 90 | 4.34e-14 | 72.0 |
Msa1078480 | AT1G02840.4 | 48.780 | 82 | 37 | 1 | 13 | 89 | 9 | 90 | 7.49e-14 | 70.9 |
Msa1078480 | AT1G02840.5 | 48.780 | 82 | 37 | 1 | 13 | 89 | 9 | 90 | 7.49e-14 | 70.9 |
Msa1078480 | AT1G02840.3 | 48.780 | 82 | 37 | 1 | 13 | 89 | 9 | 90 | 7.49e-14 | 70.9 |
Msa1078480 | AT1G02840.2 | 48.780 | 82 | 37 | 1 | 13 | 89 | 9 | 90 | 9.92e-14 | 70.5 |
Msa1078480 | AT1G53720.1 | 31.933 | 119 | 68 | 2 | 13 | 123 | 245 | 358 | 3.95e-12 | 67.0 |
Msa1078480 | AT3G61860.1 | 32.479 | 234 | 124 | 8 | 13 | 216 | 4 | 233 | 9.85e-12 | 64.7 |
Find 129 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGGGATTCTAGGGAATATT+TGG | 0.121434 | 7_2:-77421400 | Msa1078480:CDS |
CTGCTGCGCCCATTAGCCTT+AGG | 0.207621 | 7_2:+77420615 | None:intergenic |
CCCGTGATTCTCGGGATTCT+AGG | 0.293289 | 7_2:-77421410 | Msa1078480:CDS |
TGGGGCTGCGGCTGCGGCTT+CGG | 0.294948 | 7_2:+77420589 | None:intergenic |
TGGCTAATGTAATAAGAAAA+AGG | 0.315290 | 7_2:+77420230 | None:intergenic |
TGCTTTAACTGTGGCATTGA+TGG | 0.325784 | 7_2:-77421348 | Msa1078480:CDS |
CTCGGGGTTCCCGTGATTCT+CGG | 0.326338 | 7_2:-77421419 | Msa1078480:CDS |
ACGAACTCGTTCCCGTGATC+TGG | 0.327875 | 7_2:-77423627 | Msa1078480:CDS |
GCGCATCTCCTGGGAATGAT+AGG | 0.340026 | 7_2:-77420722 | Msa1078480:CDS |
CATCCCTGGGGCTGCGGCTG+CGG | 0.349340 | 7_2:+77420583 | None:intergenic |
CTATCTTCATTGTCCCTTGA+GGG | 0.366692 | 7_2:+77420639 | None:intergenic |
CGGGATTCTAGGGAATATTT+GGG | 0.369880 | 7_2:-77421399 | Msa1078480:CDS |
GAAGCCGCAGCCGCAGCCCC+AGG | 0.370362 | 7_2:-77420587 | Msa1078480:CDS |
CACTGTAATCAGACCCATCT+TGG | 0.371288 | 7_2:+77420688 | None:intergenic |
TGGGCTCGAGATTGCAAAGC+TGG | 0.378836 | 7_2:-77421321 | Msa1078480:CDS |
GGGGCTCCTATCCTCATCCC+TGG | 0.383826 | 7_2:+77420569 | None:intergenic |
CCTCGCTACGATGATAAGTA+TGG | 0.384992 | 7_2:-77423683 | Msa1078480:CDS |
ACAGCCCGGCTCGCAGCTAT+AGG | 0.385941 | 7_2:-77420971 | Msa1078480:intron |
CGTGATCTATCTGAAGGAAC+TGG | 0.392264 | 7_2:+77420807 | None:intergenic |
GAGTCCTGAGCTCATTTATA+AGG | 0.393196 | 7_2:+77420490 | None:intergenic |
CGATCCACTTTCAAAGGGTT+AGG | 0.394976 | 7_2:-77424122 | Msa1078480:five_prime_UTR |
GAGCGGGTCTTCAGCAGATA+TGG | 0.401178 | 7_2:-77423605 | Msa1078480:CDS |
TTGGATGGTCGCGATATTGA+TGG | 0.402561 | 7_2:-77422331 | Msa1078480:CDS |
TGAATGCTTAATGATGCTTA+TGG | 0.403520 | 7_2:-77420414 | Msa1078480:three_prime_UTR |
TGATGATGCAAGATACAATT+TGG | 0.409460 | 7_2:-77422350 | Msa1078480:CDS |
GAAGATAGCCCTAAGGCTAA+TGG | 0.412338 | 7_2:-77420624 | Msa1078480:CDS |
GGGCTCCTATCCTCATCCCT+GGG | 0.414164 | 7_2:+77420570 | None:intergenic |
ACTGTGGCATTGATGGCCAC+TGG | 0.418962 | 7_2:-77421341 | Msa1078480:CDS |
CTTATTGTGGAATTTGCAAA+AGG | 0.421224 | 7_2:-77422301 | Msa1078480:CDS |
CAGCCGCAGCCCCAGGGATG+AGG | 0.434071 | 7_2:-77420580 | Msa1078480:CDS |
TCGGGGTTCCCGTGATTCTC+GGG | 0.450465 | 7_2:-77421418 | Msa1078480:CDS |
TTTAAATCATTCAGGTTCCT+CGG | 0.452728 | 7_2:-77421437 | Msa1078480:intron |
GCTGGAGAACGTGACCTGCC+TGG | 0.453809 | 7_2:+77421056 | None:intergenic |
TGCTGCGCCCATTAGCCTTA+GGG | 0.454836 | 7_2:+77420616 | None:intergenic |
TTAAATCATTCAGGTTCCTC+GGG | 0.454923 | 7_2:-77421436 | Msa1078480:intron |
TTGTCATCATCCTCCTCTAC+GGG | 0.456642 | 7_2:+77420549 | None:intergenic |
TTAAAGCAGCGTCCAGATCC+AGG | 0.456838 | 7_2:+77421363 | None:intergenic |
GAGATTGCAAAGCTGGGGAT+TGG | 0.463497 | 7_2:-77421314 | Msa1078480:CDS |
AAGATAGCCCTAAGGCTAAT+GGG | 0.465291 | 7_2:-77420623 | Msa1078480:CDS |
TTGGGTCGAGGTCCACCTCC+TGG | 0.467496 | 7_2:-77421381 | Msa1078480:CDS |
CCACAAAAGAGCGCATCTCC+TGG | 0.473439 | 7_2:-77420732 | Msa1078480:CDS |
CTGTGGCATTGATGGCCACT+GGG | 0.479381 | 7_2:-77421340 | Msa1078480:CDS |
CCGTGATTCTCGGGATTCTA+GGG | 0.479447 | 7_2:-77421409 | Msa1078480:CDS |
GCTGGAGAACGAGACCTGGC+TGG | 0.480780 | 7_2:+77421038 | None:intergenic |
CCAGGTCTCGTTCTCCAGCC+AGG | 0.481833 | 7_2:-77421034 | Msa1078480:CDS |
AAAACCTAACCCTTTGAAAG+TGG | 0.491426 | 7_2:+77424118 | None:intergenic |
GTTGTCATCATCCTCCTCTA+CGG | 0.498569 | 7_2:+77420548 | None:intergenic |
AGAAGCCGATCCACTTTCAA+AGG | 0.501384 | 7_2:-77424128 | Msa1078480:five_prime_UTR |
TATCCTCATCCCTGGGGCTG+CGG | 0.503485 | 7_2:+77420577 | None:intergenic |
TTTCCGCAGCGTTCGAGATG+TGG | 0.503829 | 7_2:-77422587 | Msa1078480:intron |
CTAGGAGAACGAGACCTGGC+TGG | 0.505412 | 7_2:+77421020 | None:intergenic |
GGGCTCGAGATTGCAAAGCT+GGG | 0.505931 | 7_2:-77421320 | Msa1078480:CDS |
CAGCCAGGTCTCGTTCTCCT+AGG | 0.514139 | 7_2:-77421019 | Msa1078480:CDS |
TTATAAATGAGCTCAGGACT+CGG | 0.515566 | 7_2:-77420488 | Msa1078480:three_prime_UTR |
AACAAAACATATGAATATCC+TGG | 0.516284 | 7_2:+77420465 | None:intergenic |
GTGTTTCACGTTCTCCAGGC+AGG | 0.517810 | 7_2:-77421070 | Msa1078480:CDS |
CCTGGCTGGAGAACGAGACC+TGG | 0.518309 | 7_2:+77421034 | None:intergenic |
GCAGGTCACGTTCTCCAGCC+AGG | 0.518573 | 7_2:-77421052 | Msa1078480:CDS |
AGGGTGGTTGCAACCCAAGA+TGG | 0.519504 | 7_2:-77420702 | Msa1078480:CDS |
TCACGGCTTCTGCCTCTCCT+AGG | 0.520626 | 7_2:+77421002 | None:intergenic |
ACTGTAATCAGACCCATCTT+GGG | 0.521356 | 7_2:+77420689 | None:intergenic |
AATGAGCTCAGGACTCGGCC+AGG | 0.524548 | 7_2:-77420483 | Msa1078480:three_prime_UTR |
TGGCAATACTCGCCTCTATG+TGG | 0.526514 | 7_2:-77423663 | Msa1078480:CDS |
TGATGGAAGTCGTCTTATTG+TGG | 0.526867 | 7_2:-77422314 | Msa1078480:CDS |
TCGACTATACTTCCTTGACT+TGG | 0.532326 | 7_2:+77420770 | None:intergenic |
CACAAAAGAGCGCATCTCCT+GGG | 0.532883 | 7_2:-77420731 | Msa1078480:CDS |
GCTATCTTCATTGTCCCTTG+AGG | 0.536005 | 7_2:+77420638 | None:intergenic |
AGAACAAGTGTTACCGCTGT+GGG | 0.537145 | 7_2:-77421290 | Msa1078480:CDS |
CTATACTTCCTTGACTTGGA+AGG | 0.537488 | 7_2:+77420774 | None:intergenic |
CCTAGAATCCCGAGAATCAC+GGG | 0.537583 | 7_2:+77421410 | None:intergenic |
CTCGTTCCCGTGATCTGGAG+CGG | 0.539186 | 7_2:-77423622 | Msa1078480:CDS |
TATCTTCATTGTCCCTTGAG+GGG | 0.543060 | 7_2:+77420640 | None:intergenic |
TTATTGTGGAATTTGCAAAA+GGG | 0.544758 | 7_2:-77422300 | Msa1078480:CDS |
GCAGCCCCAGGGATGAGGAT+AGG | 0.545596 | 7_2:-77420575 | Msa1078480:CDS |
GGGCTTCGATCTCTTCTGAC+AGG | 0.550887 | 7_2:+77420828 | None:intergenic |
TGAAGACCCGCTCCAGATCA+CGG | 0.552161 | 7_2:+77423615 | None:intergenic |
GGCAATACTCGCCTCTATGT+GGG | 0.553412 | 7_2:-77423662 | Msa1078480:CDS |
TTCTGACAGGAGATCTTGAT+CGG | 0.556640 | 7_2:+77420841 | None:intergenic |
CAGCGTCCAGATCCAGGAGG+TGG | 0.557824 | 7_2:+77421369 | None:intergenic |
GGGTGGTTGCAACCCAAGAT+GGG | 0.557970 | 7_2:-77420701 | Msa1078480:CDS |
TCTAGGGAATATTTGGGTCG+AGG | 0.558291 | 7_2:-77421393 | Msa1078480:CDS |
TTCCTTGACTTGGAAGGCGG+AGG | 0.565604 | 7_2:+77420780 | None:intergenic |
CGCATCTCCTGGGAATGATA+GGG | 0.566420 | 7_2:-77420721 | Msa1078480:CDS |
GGATAGGAGCCCCGTAGAGG+AGG | 0.567283 | 7_2:-77420559 | Msa1078480:CDS |
ACTGACCTATAGCTGCGAGC+CGG | 0.569164 | 7_2:+77420966 | None:intergenic |
CCCTAGAATCCCGAGAATCA+CGG | 0.570993 | 7_2:+77421409 | None:intergenic |
AAGCCGCAGCCGCAGCCCCA+GGG | 0.571588 | 7_2:-77420586 | Msa1078480:CDS |
GAAGACCCGCTCCAGATCAC+GGG | 0.572455 | 7_2:+77423616 | None:intergenic |
CTAACCCTTTGAAAGTGGAT+CGG | 0.574194 | 7_2:+77424123 | None:intergenic |
TATTGTGGAATTTGCAAAAG+GGG | 0.575734 | 7_2:-77422299 | Msa1078480:intron |
GAAGCCGATCCACTTTCAAA+GGG | 0.576229 | 7_2:-77424127 | Msa1078480:five_prime_UTR |
AATAAGGATTGGTACCTTGG+AGG | 0.577956 | 7_2:+77424086 | None:intergenic |
TGTTACCGCTGTGGGGAGAG+AGG | 0.579057 | 7_2:-77421282 | Msa1078480:CDS |
GAAGAGCAGAAGCCCCTCAA+GGG | 0.580119 | 7_2:-77420652 | Msa1078480:CDS |
TGAAGAGCAGAAGCCCCTCA+AGG | 0.584992 | 7_2:-77420653 | Msa1078480:CDS |
GTCCTCCGCCTTCCAAGTCA+AGG | 0.589515 | 7_2:-77420782 | Msa1078480:CDS |
GTGATCTATCTGAAGGAACT+GGG | 0.591868 | 7_2:+77420808 | None:intergenic |
TCTCCTAGGAGAACGAGACC+TGG | 0.593532 | 7_2:+77421016 | None:intergenic |
GCAACCACCCTATCATTCCC+AGG | 0.596323 | 7_2:+77420714 | None:intergenic |
ACAATTGTTGCAACCAACAG+AGG | 0.600917 | 7_2:+77420351 | None:intergenic |
TACTTCCTTGACTTGGAAGG+CGG | 0.601572 | 7_2:+77420777 | None:intergenic |
AAGACAAACGACCCACATAG+AGG | 0.604217 | 7_2:+77423651 | None:intergenic |
CCGTGACAGAAGCTACAGCC+CGG | 0.604984 | 7_2:-77420985 | Msa1078480:CDS |
GGCTCGAGATTGCAAAGCTG+GGG | 0.605985 | 7_2:-77421319 | Msa1078480:CDS |
CAGTTCCTTCAGATAGATCA+CGG | 0.612374 | 7_2:-77420806 | Msa1078480:CDS |
GATGCAAGATACAATTTGGA+TGG | 0.614822 | 7_2:-77422346 | Msa1078480:CDS |
TCTGGACGCTGCTTTAACTG+TGG | 0.621834 | 7_2:-77421357 | Msa1078480:CDS |
CCGGGCTGTAGCTTCTGTCA+CGG | 0.626094 | 7_2:+77420985 | None:intergenic |
GGACAATGAAGATAGCCCTA+AGG | 0.628195 | 7_2:-77420631 | Msa1078480:CDS |
GATATAAATAGTGAAACGCA+TGG | 0.631829 | 7_2:-77424153 | Msa1078480:five_prime_UTR |
AGGTCTCGTTCTCCTAGGAG+AGG | 0.635451 | 7_2:-77421014 | Msa1078480:CDS |
ATCTCCTGGGAATGATAGGG+TGG | 0.637023 | 7_2:-77420718 | Msa1078480:CDS |
GATGGGTCTGATTACAGTGA+TGG | 0.645059 | 7_2:-77420684 | Msa1078480:CDS |
AAGAACAAGTGTTACCGCTG+TGG | 0.645882 | 7_2:-77421291 | Msa1078480:CDS |
TGAGGATAGGAGCCCCGTAG+AGG | 0.657043 | 7_2:-77420562 | Msa1078480:CDS |
AGGGTAAGAACTTACAACAA+AGG | 0.661425 | 7_2:+77422546 | None:intergenic |
GGGTCTTCAGCAGATATGGA+AGG | 0.663027 | 7_2:-77423601 | Msa1078480:intron |
GGCTCCTATCCTCATCCCTG+GGG | 0.667502 | 7_2:+77420571 | None:intergenic |
AAGTATAGTCGATCTCCTGA+AGG | 0.670998 | 7_2:-77420759 | Msa1078480:CDS |
TAAATCATTCAGGTTCCTCG+GGG | 0.679098 | 7_2:-77421435 | Msa1078480:intron |
CTTGCATCATCAGCATCTCG+AGG | 0.683904 | 7_2:+77422361 | None:intergenic |
TGTCATCATCCTCCTCTACG+GGG | 0.697101 | 7_2:+77420550 | None:intergenic |
CTTTGCAATCTCGAGCCCAG+TGG | 0.704739 | 7_2:+77421325 | None:intergenic |
ATGCTTATGGTTATGAACAA+CGG | 0.706115 | 7_2:-77420401 | Msa1078480:three_prime_UTR |
GAACAAGTGTTACCGCTGTG+GGG | 0.707356 | 7_2:-77421289 | Msa1078480:CDS |
CCATACTTATCATCGTAGCG+AGG | 0.710626 | 7_2:+77423683 | None:intergenic |
CGAGAATCACGGGAACCCCG+AGG | 0.735565 | 7_2:+77421420 | None:intergenic |
TATGACCTCTCTCCCCACAG+CGG | 0.773660 | 7_2:+77421277 | None:intergenic |
AAGCAGCGTCCAGATCCAGG+AGG | 0.786991 | 7_2:+77421366 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GGAAAAATAAAAAATTAAAT+GGG | + | chr7_2:77420336-77420355 | None:intergenic | 10.0% |
!! | TGGAAAAATAAAAAATTAAA+TGG | + | chr7_2:77420337-77420356 | None:intergenic | 10.0% |
!!! | TTAATTTTTTATTTTTCCAT+CGG | - | chr7_2:77420338-77420357 | Msa1078480:three_prime_UTR | 10.0% |
!! | ATAAAAAATTAAATGGGAAT+AGG | + | chr7_2:77420330-77420349 | None:intergenic | 15.0% |
!! | AATAAAAAAGTAACAAAACA+GGG | + | chr7_2:77421838-77421857 | None:intergenic | 15.0% |
!! | AAATAAAAAAGTAACAAAAC+AGG | + | chr7_2:77421839-77421858 | None:intergenic | 15.0% |
!! | TTTCAAATATAAGCAAAAAT+TGG | - | chr7_2:77422293-77422312 | Msa1078480:intron | 15.0% |
!!! | TATGAATTTTGTTCAAAATT+AGG | - | chr7_2:77422372-77422391 | Msa1078480:CDS | 15.0% |
!! | AACAAAAATTGTTCAAATAA+AGG | + | chr7_2:77422411-77422430 | None:intergenic | 15.0% |
!!! | TTTTTGTTTTTATTTGATTC+CGG | - | chr7_2:77422423-77422442 | Msa1078480:intron | 15.0% |
!! | AAAAGCCTAAATATATATTA+TGG | + | chr7_2:77422503-77422522 | None:intergenic | 15.0% |
!!! | TGTTCTTTTAAATTTCTATT+GGG | - | chr7_2:77422573-77422592 | Msa1078480:CDS | 15.0% |
!!! | ATTTAACTTTGTAAATTTCA+AGG | - | chr7_2:77422627-77422646 | Msa1078480:intron | 15.0% |
!!! | TTTAACTTTGTAAATTTCAA+GGG | - | chr7_2:77422628-77422647 | Msa1078480:intron | 15.0% |
!! | TAGGAAAATGAAATTGAATT+GGG | + | chr7_2:77420311-77420330 | None:intergenic | 20.0% |
!! | ATAGGAAAATGAAATTGAAT+TGG | + | chr7_2:77420312-77420331 | None:intergenic | 20.0% |
!! | ATCAAATTTAAATCGAAAAC+CGG | + | chr7_2:77420456-77420475 | None:intergenic | 20.0% |
!!! | ATGCTCGTAATTTTTTTTTT+GGG | - | chr7_2:77420512-77420531 | Msa1078480:exon | 20.0% |
!!! | TTTTTTAACCAGTTTATGAA+TGG | - | chr7_2:77420986-77421005 | Msa1078480:CDS | 20.0% |
!!! | ATAATTTTCCATTCATAAAC+TGG | + | chr7_2:77420997-77421016 | None:intergenic | 20.0% |
!! | GAGACATATAACAAAAAAAA+AGG | + | chr7_2:77422114-77422133 | None:intergenic | 20.0% |
!!! | TCTTTTATAATTAGCTTTCA+AGG | - | chr7_2:77422132-77422151 | Msa1078480:intron | 20.0% |
!!! | TGCTTATATTTGAAATCAAA+AGG | + | chr7_2:77422288-77422307 | None:intergenic | 20.0% |
!! | TTGACCAAATTCATAAAATT+TGG | + | chr7_2:77422343-77422362 | None:intergenic | 20.0% |
!! | TACTGCCATAATATATATTT+AGG | - | chr7_2:77422495-77422514 | Msa1078480:intron | 20.0% |
!!! | CTGTTCTTTTAAATTTCTAT+TGG | - | chr7_2:77422572-77422591 | Msa1078480:CDS | 20.0% |
!! | TTAACTTTGTAAATTTCAAG+GGG | - | chr7_2:77422629-77422648 | Msa1078480:intron | 20.0% |
!!! | TCTGTTGTCTTTTATTTTTA+TGG | - | chr7_2:77422793-77422812 | Msa1078480:intron | 20.0% |
!! | TTTACTTATAAGCTGAAAAT+TGG | - | chr7_2:77423473-77423492 | Msa1078480:intron | 20.0% |
!! | TTACTTATAAGCTGAAAATT+GGG | - | chr7_2:77423474-77423493 | Msa1078480:intron | 20.0% |
!! | ATAAGGAAAAATACTTCTTA+AGG | + | chr7_2:77423852-77423871 | None:intergenic | 20.0% |
!! | ATTAAGCATTCAAAAAAAGA+TGG | + | chr7_2:77423934-77423953 | None:intergenic | 20.0% |
!!! | TTAAATTTTTAAACCTCTGT+TGG | - | chr7_2:77423992-77424011 | Msa1078480:intron | 20.0% |
!!! | ATAATAGCACTATTTTTCAT+TGG | + | chr7_2:77424149-77424168 | None:intergenic | 20.0% |
!!! | AATGAAAAATAGTGCTATTA+TGG | - | chr7_2:77424148-77424167 | Msa1078480:five_prime_UTR | 20.0% |
! | AGGAAAATGAAATTGAATTG+GGG | + | chr7_2:77420310-77420329 | None:intergenic | 25.0% |
! | CAAAAAAAAAATTACGAGCA+TGG | + | chr7_2:77420513-77420532 | None:intergenic | 25.0% |
!!! | CATGCTCGTAATTTTTTTTT+TGG | - | chr7_2:77420511-77420530 | Msa1078480:exon | 25.0% |
! | TGCAATCAATAATTGAATCT+GGG | + | chr7_2:77420629-77420648 | None:intergenic | 25.0% |
! | ATGCAATCAATAATTGAATC+TGG | + | chr7_2:77420630-77420649 | None:intergenic | 25.0% |
! | CCAATTTAAACAATTGTGAA+TGG | + | chr7_2:77420816-77420835 | None:intergenic | 25.0% |
! | CCATTCACAATTGTTTAAAT+TGG | - | chr7_2:77420813-77420832 | Msa1078480:CDS | 25.0% |
! | AAAAGACAAAAATTGCATAG+AGG | + | chr7_2:77420844-77420863 | None:intergenic | 25.0% |
! | TCATAAACTGGTTAAAAAAC+TGG | + | chr7_2:77420985-77421004 | None:intergenic | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | + | chr7_2:77421097-77421116 | None:intergenic | 25.0% |
! | AACTTAAATGATCTTGTTGA+AGG | - | chr7_2:77421505-77421524 | Msa1078480:intron | 25.0% |
!!! | AATGTTATTGCGTGTTTTTA+TGG | - | chr7_2:77421642-77421661 | Msa1078480:intron | 25.0% |
! | TTATTGTGGAATTTGCAAAA+GGG | - | chr7_2:77422056-77422075 | Msa1078480:intron | 25.0% |
!!! | AGGAGTTTTTTTGTTTTGTT+TGG | - | chr7_2:77422152-77422171 | Msa1078480:intron | 25.0% |
! | TATAAGCAAAAATTGGTCAA+AGG | - | chr7_2:77422300-77422319 | Msa1078480:CDS | 25.0% |
! | TCAAAGGAAGTTTATGAATT+TGG | - | chr7_2:77422316-77422335 | Msa1078480:CDS | 25.0% |
!! | TGGTCCAAATTTTATGAATT+TGG | - | chr7_2:77422336-77422355 | Msa1078480:CDS | 25.0% |
! | TCAAATAAAGGTGATGAATT+TGG | + | chr7_2:77422399-77422418 | None:intergenic | 25.0% |
! | TAACTTTGTAAATTTCAAGG+GGG | - | chr7_2:77422630-77422649 | Msa1078480:intron | 25.0% |
! | TTACTTTATGACAACATTGT+TGG | - | chr7_2:77422770-77422789 | Msa1078480:intron | 25.0% |
!!! | TCATGTTGCTATTTTTCTTT+TGG | - | chr7_2:77422894-77422913 | Msa1078480:intron | 25.0% |
!!! | CATGTTGCTATTTTTCTTTT+GGG | - | chr7_2:77422895-77422914 | Msa1078480:intron | 25.0% |
! | AAATTGAAATCATCAGTTGA+AGG | + | chr7_2:77423237-77423256 | None:intergenic | 25.0% |
! | AAAAATACTTCTTAAGGTGA+TGG | + | chr7_2:77423846-77423865 | None:intergenic | 25.0% |
! | AACAAAACATATGAATATCC+TGG | + | chr7_2:77423894-77423913 | None:intergenic | 25.0% |
! | TGGCTAATGTAATAAGAAAA+AGG | + | chr7_2:77424129-77424148 | None:intergenic | 25.0% |
GATATAAATAGTGAAACGCA+TGG | - | chr7_2:77420203-77420222 | Msa1078480:three_prime_UTR | 30.0% | |
TTAAAGGGTGAATCAATTGA+AGG | + | chr7_2:77420387-77420406 | None:intergenic | 30.0% | |
TTGGGAATGGAATGATTAAA+GGG | + | chr7_2:77420402-77420421 | None:intergenic | 30.0% | |
ATTGGGAATGGAATGATTAA+AGG | + | chr7_2:77420403-77420422 | None:intergenic | 30.0% | |
! | ATCTTCTCTTTTTCTCTTGA+TGG | + | chr7_2:77420567-77420586 | None:intergenic | 30.0% |
!! | GTTGTTTTCATAACCTATGT+TGG | - | chr7_2:77421236-77421255 | Msa1078480:intron | 30.0% |
TTTCATAAGTTCTCCAACAT+AGG | + | chr7_2:77421252-77421271 | None:intergenic | 30.0% | |
TTCCCCTAACTTTAGATATA+GGG | + | chr7_2:77421387-77421406 | None:intergenic | 30.0% | |
TTTCCCCTAACTTTAGATAT+AGG | + | chr7_2:77421388-77421407 | None:intergenic | 30.0% | |
AAAGTTAGGGGAAAATATAC+AGG | - | chr7_2:77421394-77421413 | Msa1078480:CDS | 30.0% | |
!!! | TTCTTTCCAAGCTTTGTTTT+GGG | - | chr7_2:77421417-77421436 | Msa1078480:CDS | 30.0% |
AAGTTAAAAATGACACCTGT+GGG | + | chr7_2:77421490-77421509 | None:intergenic | 30.0% | |
TAAGTTAAAAATGACACCTG+TGG | + | chr7_2:77421491-77421510 | None:intergenic | 30.0% | |
! | ATGATCTTGTTGAAGGTTTT+TGG | - | chr7_2:77421512-77421531 | Msa1078480:intron | 30.0% |
! | TGATCTTGTTGAAGGTTTTT+GGG | - | chr7_2:77421513-77421532 | Msa1078480:intron | 30.0% |
!! | ATTGCGTGTTTTTATGGAAT+TGG | - | chr7_2:77421648-77421667 | Msa1078480:intron | 30.0% |
TTCCAGTAGTTAAGTAATGA+TGG | - | chr7_2:77421725-77421744 | Msa1078480:intron | 30.0% | |
AATGGTTTCCATAAACAGTA+AGG | + | chr7_2:77421751-77421770 | None:intergenic | 30.0% | |
AAAGTAACAAAACAGGGAAA+GGG | + | chr7_2:77421832-77421851 | None:intergenic | 30.0% | |
AAAAGTAACAAAACAGGGAA+AGG | + | chr7_2:77421833-77421852 | None:intergenic | 30.0% | |
ATTCCTGCTCAAAATATGTA+AGG | + | chr7_2:77421967-77421986 | None:intergenic | 30.0% | |
! | TGATGATGCAAGATACAATT+TGG | - | chr7_2:77422006-77422025 | Msa1078480:intron | 30.0% |
CTTATTGTGGAATTTGCAAA+AGG | - | chr7_2:77422055-77422074 | Msa1078480:intron | 30.0% | |
TATTGTGGAATTTGCAAAAG+GGG | - | chr7_2:77422057-77422076 | Msa1078480:intron | 30.0% | |
TCGTCAAATATATACATGGA+TGG | + | chr7_2:77422230-77422249 | None:intergenic | 30.0% | |
ACACTCGTCAAATATATACA+TGG | + | chr7_2:77422234-77422253 | None:intergenic | 30.0% | |
!! | ATAGTATTGGCAATTTGCAA+GGG | - | chr7_2:77422448-77422467 | Msa1078480:intron | 30.0% |
!! | AGTTCACTATTCTTGCTTTT+TGG | - | chr7_2:77422543-77422562 | Msa1078480:intron | 30.0% |
AAGTCTTCTTTCATCTTCAA+GGG | + | chr7_2:77422604-77422623 | None:intergenic | 30.0% | |
AAAGTCTTCTTTCATCTTCA+AGG | + | chr7_2:77422605-77422624 | None:intergenic | 30.0% | |
TTATGCTTTACTTTGACTGT+TGG | - | chr7_2:77422823-77422842 | Msa1078480:intron | 30.0% | |
CAACATGATCAGAAATACTA+GGG | + | chr7_2:77422882-77422901 | None:intergenic | 30.0% | |
!!! | TTTTGGGCTTTAAATCATTC+AGG | - | chr7_2:77422911-77422930 | Msa1078480:intron | 30.0% |
! | TTTAAATCATTCAGGTTCCT+CGG | - | chr7_2:77422919-77422938 | Msa1078480:intron | 30.0% |
AGAACAGTCCAAAAAAATTG+AGG | - | chr7_2:77423117-77423136 | Msa1078480:intron | 30.0% | |
ATTGCAACAATGCTTTCTAA+TGG | - | chr7_2:77423201-77423220 | Msa1078480:intron | 30.0% | |
! | TTTTCCTTATAAATGAGCTC+AGG | - | chr7_2:77423862-77423881 | Msa1078480:intron | 30.0% |
TGAATGCTTAATGATGCTTA+TGG | - | chr7_2:77423942-77423961 | Msa1078480:intron | 30.0% | |
ATGCTTATGGTTATGAACAA+CGG | - | chr7_2:77423955-77423974 | Msa1078480:intron | 30.0% | |
! | AAAACCTAACCCTTTGAAAG+TGG | + | chr7_2:77420241-77420260 | None:intergenic | 35.0% |
! | CTTTCAAAGGGTTAGGTTTT+CGG | - | chr7_2:77420241-77420260 | Msa1078480:three_prime_UTR | 35.0% |
AGAGAGAAGAGAATAAGGAT+TGG | + | chr7_2:77420284-77420303 | None:intergenic | 35.0% | |
GGAAAAGAGAGAAGAGAATA+AGG | + | chr7_2:77420289-77420308 | None:intergenic | 35.0% | |
ATGAAATTGGGAATTGGGAA+TGG | + | chr7_2:77420415-77420434 | None:intergenic | 35.0% | |
GATCGATGAAATTGGGAATT+GGG | + | chr7_2:77420420-77420439 | None:intergenic | 35.0% | |
CAATTCCCAATTTCATCGAT+CGG | - | chr7_2:77420419-77420438 | Msa1078480:three_prime_UTR | 35.0% | |
ACAAACCGATCGATGAAATT+GGG | + | chr7_2:77420427-77420446 | None:intergenic | 35.0% | |
TACAAACCGATCGATGAAAT+TGG | + | chr7_2:77420428-77420447 | None:intergenic | 35.0% | |
TCTCATTCCTAGACTATTAG+AGG | - | chr7_2:77420918-77420937 | Msa1078480:intron | 35.0% | |
AACCTAGCTAGATTAGTGAT+AGG | - | chr7_2:77421043-77421062 | Msa1078480:CDS | 35.0% | |
AACCTATCACTAATCTAGCT+AGG | + | chr7_2:77421048-77421067 | None:intergenic | 35.0% | |
AGCTAGATTAGTGATAGGTT+TGG | - | chr7_2:77421048-77421067 | Msa1078480:CDS | 35.0% | |
TTATTTGCAGCTTATAGCAC+AGG | - | chr7_2:77421112-77421131 | Msa1078480:intron | 35.0% | |
CTTTAGATATAGGGCCTATT+TGG | + | chr7_2:77421378-77421397 | None:intergenic | 35.0% | |
! | TAGGCCCTATATCTAAAGTT+AGG | - | chr7_2:77421380-77421399 | Msa1078480:CDS | 35.0% |
! | AGGCCCTATATCTAAAGTTA+GGG | - | chr7_2:77421381-77421400 | Msa1078480:CDS | 35.0% |
!!! | GTTCTTTCCAAGCTTTGTTT+TGG | - | chr7_2:77421416-77421435 | Msa1078480:CDS | 35.0% |
! | TTTTGGGCTTGGATTTATGT+TGG | - | chr7_2:77421433-77421452 | Msa1078480:intron | 35.0% |
TTATACCTCATGTTATGCGT+GGG | - | chr7_2:77421456-77421475 | Msa1078480:intron | 35.0% | |
!!! | TTTTGGGTTTTCACTAAACC+CGG | - | chr7_2:77421529-77421548 | Msa1078480:intron | 35.0% |
ATTACACCAAGATTACACCA+AGG | + | chr7_2:77421576-77421595 | None:intergenic | 35.0% | |
! | TGGTGTAATCTTGGTGTAAT+TGG | - | chr7_2:77421576-77421595 | Msa1078480:intron | 35.0% |
! | TGTAATCTTGGTGTAATTGG+TGG | - | chr7_2:77421579-77421598 | Msa1078480:intron | 35.0% |
AATTGGCAACAATCACAAAC+TGG | - | chr7_2:77421665-77421684 | Msa1078480:intron | 35.0% | |
! | AATGATGGCCTTACTGTTTA+TGG | - | chr7_2:77421740-77421759 | Msa1078480:intron | 35.0% |
AGGGTAAGAACTTACAACAA+AGG | + | chr7_2:77421813-77421832 | None:intergenic | 35.0% | |
!! | GTTCCTTACATATTTTGAGC+AGG | - | chr7_2:77421961-77421980 | Msa1078480:intron | 35.0% |
GATGCAAGATACAATTTGGA+TGG | - | chr7_2:77422010-77422029 | Msa1078480:intron | 35.0% | |
AAGGGGTAGGAATTAATTTC+CGG | - | chr7_2:77422074-77422093 | Msa1078480:intron | 35.0% | |
! | AAAGGTGTAATAAGTACAGC+CGG | + | chr7_2:77422096-77422115 | None:intergenic | 35.0% |
TTTGATTCCGGAGATAGTAT+TGG | - | chr7_2:77422435-77422454 | Msa1078480:intron | 35.0% | |
CAAATTGCCAATACTATCTC+CGG | + | chr7_2:77422445-77422464 | None:intergenic | 35.0% | |
!! | GATAGTATTGGCAATTTGCA+AGG | - | chr7_2:77422447-77422466 | Msa1078480:intron | 35.0% |
!! | TAGTGAACTCTAAGACACTA+AGG | + | chr7_2:77422532-77422551 | None:intergenic | 35.0% |
GGTTTACTAGCGCTTTATAA+TGG | - | chr7_2:77422651-77422670 | Msa1078480:intron | 35.0% | |
TTATGCTGCTATATAGCAAG+AGG | + | chr7_2:77422701-77422720 | None:intergenic | 35.0% | |
GCAACATGATCAGAAATACT+AGG | + | chr7_2:77422883-77422902 | None:intergenic | 35.0% | |
! | TTAAATCATTCAGGTTCCTC+GGG | - | chr7_2:77422920-77422939 | Msa1078480:intron | 35.0% |
CAGTCCAAAAAAATTGAGGT+AGG | - | chr7_2:77423121-77423140 | Msa1078480:intron | 35.0% | |
!!! | ATGGCCTACCTCAATTTTTT+TGG | + | chr7_2:77423128-77423147 | None:intergenic | 35.0% |
AAAAAAATTGAGGTAGGCCA+TGG | - | chr7_2:77423127-77423146 | Msa1078480:intron | 35.0% | |
TTATAAATGAGCTCAGGACT+CGG | - | chr7_2:77423868-77423887 | Msa1078480:intron | 35.0% | |
! | CTAACCCTTTGAAAGTGGAT+CGG | + | chr7_2:77420236-77420255 | None:intergenic | 40.0% |
! | AATAAGGATTGGTACCTTGG+AGG | + | chr7_2:77420273-77420292 | None:intergenic | 40.0% |
! | GAGAATAAGGATTGGTACCT+TGG | + | chr7_2:77420276-77420295 | None:intergenic | 40.0% |
CATGCAATTACAAGATCCGA+TGG | + | chr7_2:77420357-77420376 | None:intergenic | 40.0% | |
CGATCGATGAAATTGGGAAT+TGG | + | chr7_2:77420421-77420440 | None:intergenic | 40.0% | |
!! | TCGATCGGTTTGTATTTCTC+CGG | - | chr7_2:77420434-77420453 | Msa1078480:three_prime_UTR | 40.0% |
GTTCTATCACATTCCATGTC+TGG | - | chr7_2:77420888-77420907 | Msa1078480:intron | 40.0% | |
ATGAGATACACAACCAGACA+TGG | + | chr7_2:77420904-77420923 | None:intergenic | 40.0% | |
ATCCCAAACCTTGTGTTTGT+CGG | - | chr7_2:77420943-77420962 | Msa1078480:intron | 40.0% | |
ATCCGACAAACACAAGGTTT+GGG | + | chr7_2:77420948-77420967 | None:intergenic | 40.0% | |
AATCCGACAAACACAAGGTT+TGG | + | chr7_2:77420949-77420968 | None:intergenic | 40.0% | |
GAACAAATCCGACAAACACA+AGG | + | chr7_2:77420954-77420973 | None:intergenic | 40.0% | |
ATTAGTGATAGGTTTGGCCT+GGG | - | chr7_2:77421054-77421073 | Msa1078480:CDS | 40.0% | |
TCAACTACGCCAATCCAAAT+AGG | - | chr7_2:77421361-77421380 | Msa1078480:CDS | 40.0% | |
GATATAGGGCCTATTTGGAT+TGG | + | chr7_2:77421373-77421392 | None:intergenic | 40.0% | |
! | GGCCCTATATCTAAAGTTAG+GGG | - | chr7_2:77421382-77421401 | Msa1078480:CDS | 40.0% |
GTTATACCTCATGTTATGCG+TGG | - | chr7_2:77421455-77421474 | Msa1078480:intron | 40.0% | |
AAAATGACACCTGTGGGATA+CGG | + | chr7_2:77421484-77421503 | None:intergenic | 40.0% | |
! | TGGTGTTTAGTTCGTCTTTG+AGG | - | chr7_2:77421685-77421704 | Msa1078480:intron | 40.0% |
! | GGTGTTTAGTTCGTCTTTGA+GGG | - | chr7_2:77421686-77421705 | Msa1078480:intron | 40.0% |
! | GTGTTTAGTTCGTCTTTGAG+GGG | - | chr7_2:77421687-77421706 | Msa1078480:intron | 40.0% |
GGCCATCATTACTTAACTAC+TGG | + | chr7_2:77421730-77421749 | None:intergenic | 40.0% | |
AGATAATAGAAGCCGCCTTT+GGG | + | chr7_2:77421889-77421908 | None:intergenic | 40.0% | |
TAGATAATAGAAGCCGCCTT+TGG | + | chr7_2:77421890-77421909 | None:intergenic | 40.0% | |
! | TGATGGAAGTCGTCTTATTG+TGG | - | chr7_2:77422042-77422061 | Msa1078480:intron | 40.0% |
! | CTAAAGCATCAGCATTAGAC+AGG | + | chr7_2:77422183-77422202 | None:intergenic | 40.0% |
CTAGCGCTTTATAATGGCTT+TGG | - | chr7_2:77422657-77422676 | Msa1078480:intron | 40.0% | |
! | TAAATCATTCAGGTTCCTCG+GGG | - | chr7_2:77422921-77422940 | Msa1078480:intron | 40.0% |
! | TCGGGATTCTAGGGAATATT+TGG | - | chr7_2:77422956-77422975 | Msa1078480:intron | 40.0% |
! | CGGGATTCTAGGGAATATTT+GGG | - | chr7_2:77422957-77422976 | Msa1078480:intron | 40.0% |
! | TGCTTTAACTGTGGCATTGA+TGG | - | chr7_2:77423008-77423027 | Msa1078480:intron | 40.0% |
TTAAGATTACAGCACCAGCT+TGG | + | chr7_2:77423163-77423182 | None:intergenic | 40.0% | |
TTCTGACAGGAGATCTTGAT+CGG | + | chr7_2:77423518-77423537 | None:intergenic | 40.0% | |
GTGATCTATCTGAAGGAACT+GGG | + | chr7_2:77423551-77423570 | None:intergenic | 40.0% | |
CAGTTCCTTCAGATAGATCA+CGG | - | chr7_2:77423550-77423569 | Msa1078480:intron | 40.0% | |
!! | CTATACTTCCTTGACTTGGA+AGG | + | chr7_2:77423585-77423604 | None:intergenic | 40.0% |
TCGACTATACTTCCTTGACT+TGG | + | chr7_2:77423589-77423608 | None:intergenic | 40.0% | |
AAGTATAGTCGATCTCCTGA+AGG | - | chr7_2:77423597-77423616 | Msa1078480:intron | 40.0% | |
ACTGTAATCAGACCCATCTT+GGG | + | chr7_2:77423670-77423689 | None:intergenic | 40.0% | |
TATCTTCATTGTCCCTTGAG+GGG | + | chr7_2:77423719-77423738 | None:intergenic | 40.0% | |
CTATCTTCATTGTCCCTTGA+GGG | + | chr7_2:77423720-77423739 | None:intergenic | 40.0% | |
AAGATAGCCCTAAGGCTAAT+GGG | - | chr7_2:77423733-77423752 | Msa1078480:intron | 40.0% | |
GAGTCCTGAGCTCATTTATA+AGG | + | chr7_2:77423869-77423888 | None:intergenic | 40.0% | |
ACAATTGTTGCAACCAACAG+AGG | + | chr7_2:77424008-77424027 | None:intergenic | 40.0% | |
AGAAGCCGATCCACTTTCAA+AGG | - | chr7_2:77420228-77420247 | Msa1078480:three_prime_UTR | 45.0% | |
GAAGCCGATCCACTTTCAAA+GGG | - | chr7_2:77420229-77420248 | Msa1078480:three_prime_UTR | 45.0% | |
CGATCCACTTTCAAAGGGTT+AGG | - | chr7_2:77420234-77420253 | Msa1078480:three_prime_UTR | 45.0% | |
CCATACTTATCATCGTAGCG+AGG | + | chr7_2:77420676-77420695 | None:intergenic | 45.0% | |
CCTCGCTACGATGATAAGTA+TGG | - | chr7_2:77420673-77420692 | Msa1078480:CDS | 45.0% | |
AAGACAAACGACCCACATAG+AGG | + | chr7_2:77420708-77420727 | None:intergenic | 45.0% | |
GGGATCTCCTCTAATAGTCT+AGG | + | chr7_2:77420928-77420947 | None:intergenic | 45.0% | |
CAAAGTGACACAAGGAGACA+TGG | + | chr7_2:77421022-77421041 | None:intergenic | 45.0% | |
CTAGGTTGCAAAGTGACACA+AGG | + | chr7_2:77421030-77421049 | None:intergenic | 45.0% | |
GATTAGTGATAGGTTTGGCC+TGG | - | chr7_2:77421053-77421072 | Msa1078480:CDS | 45.0% | |
TTAGTGATAGGTTTGGCCTG+GGG | - | chr7_2:77421055-77421074 | Msa1078480:CDS | 45.0% | |
!!! | TCCAAGCTTTGTTTTGGGCT+TGG | - | chr7_2:77421422-77421441 | Msa1078480:CDS | 45.0% |
TCCAAGCCCAAAACAAAGCT+TGG | + | chr7_2:77421426-77421445 | None:intergenic | 45.0% | |
!! | TCCTACCTGAGTGTTGACTT+TGG | - | chr7_2:77421606-77421625 | Msa1078480:intron | 45.0% |
AATCGCCAAAGTCAACACTC+AGG | + | chr7_2:77421614-77421633 | None:intergenic | 45.0% | |
ATGTTCATTGCTCTGCCCAA+AGG | - | chr7_2:77421871-77421890 | Msa1078480:intron | 45.0% | |
GGCGGCTTCTATTATCTACA+CGG | - | chr7_2:77421892-77421911 | Msa1078480:intron | 45.0% | |
GCGGCTTCTATTATCTACAC+GGG | - | chr7_2:77421893-77421912 | Msa1078480:intron | 45.0% | |
CGGCTTCTATTATCTACACG+GGG | - | chr7_2:77421894-77421913 | Msa1078480:intron | 45.0% | |
GGCTTCTATTATCTACACGG+GGG | - | chr7_2:77421895-77421914 | Msa1078480:intron | 45.0% | |
TTGGATGGTCGCGATATTGA+TGG | - | chr7_2:77422025-77422044 | Msa1078480:intron | 45.0% | |
GTGGAATTTGCAAAAGGGGT+AGG | - | chr7_2:77422061-77422080 | Msa1078480:intron | 45.0% | |
TCTAGGGAATATTTGGGTCG+AGG | - | chr7_2:77422963-77422982 | Msa1078480:intron | 45.0% | |
AAGAACAAGTGTTACCGCTG+TGG | - | chr7_2:77423065-77423084 | Msa1078480:intron | 45.0% | |
AGAACAAGTGTTACCGCTGT+GGG | - | chr7_2:77423066-77423085 | Msa1078480:intron | 45.0% | |
CGTGATCTATCTGAAGGAAC+TGG | + | chr7_2:77423552-77423571 | None:intergenic | 45.0% | |
!! | TACTTCCTTGACTTGGAAGG+CGG | + | chr7_2:77423582-77423601 | None:intergenic | 45.0% |
CACTGTAATCAGACCCATCT+TGG | + | chr7_2:77423671-77423690 | None:intergenic | 45.0% | |
GATGGGTCTGATTACAGTGA+TGG | - | chr7_2:77423672-77423691 | Msa1078480:CDS | 45.0% | |
GCTATCTTCATTGTCCCTTG+AGG | + | chr7_2:77423721-77423740 | None:intergenic | 45.0% | |
GGACAATGAAGATAGCCCTA+AGG | - | chr7_2:77423725-77423744 | Msa1078480:intron | 45.0% | |
GAAGATAGCCCTAAGGCTAA+TGG | - | chr7_2:77423732-77423751 | Msa1078480:intron | 45.0% | |
TTGTCATCATCCTCCTCTAC+GGG | + | chr7_2:77423810-77423829 | None:intergenic | 45.0% | |
GTTGTCATCATCCTCCTCTA+CGG | + | chr7_2:77423811-77423830 | None:intergenic | 45.0% | |
! | GTTTTCGGCAATCTCCTCCA+AGG | - | chr7_2:77420256-77420275 | Msa1078480:three_prime_UTR | 50.0% |
TGGCAATACTCGCCTCTATG+TGG | - | chr7_2:77420693-77420712 | Msa1078480:CDS | 50.0% | |
GGCAATACTCGCCTCTATGT+GGG | - | chr7_2:77420694-77420713 | Msa1078480:CDS | 50.0% | |
GGGTCTTCAGCAGATATGGA+AGG | - | chr7_2:77420755-77420774 | Msa1078480:CDS | 50.0% | |
! | TGGGTTTTCACTAAACCCGG+AGG | - | chr7_2:77421532-77421551 | Msa1078480:intron | 50.0% |
GCCAAAGTCAACACTCAGGT+AGG | + | chr7_2:77421610-77421629 | None:intergenic | 50.0% | |
TATCCACATCTCGAACGCTG+CGG | + | chr7_2:77421775-77421794 | None:intergenic | 50.0% | |
TTCATTGCTCTGCCCAAAGG+CGG | - | chr7_2:77421874-77421893 | Msa1078480:intron | 50.0% | |
CACGGGGGAGTTCAATTATG+CGG | - | chr7_2:77421910-77421929 | Msa1078480:intron | 50.0% | |
CTTGCATCATCAGCATCTCG+AGG | + | chr7_2:77421998-77422017 | None:intergenic | 50.0% | |
CCTAGAATCCCGAGAATCAC+GGG | + | chr7_2:77422949-77422968 | None:intergenic | 50.0% | |
CCCTAGAATCCCGAGAATCA+CGG | + | chr7_2:77422950-77422969 | None:intergenic | 50.0% | |
CCGTGATTCTCGGGATTCTA+GGG | - | chr7_2:77422947-77422966 | Msa1078480:intron | 50.0% | |
TTAAAGCAGCGTCCAGATCC+AGG | + | chr7_2:77422996-77423015 | None:intergenic | 50.0% | |
! | TCTGGACGCTGCTTTAACTG+TGG | - | chr7_2:77422999-77423018 | Msa1078480:intron | 50.0% |
GAGATTGCAAAGCTGGGGAT+TGG | - | chr7_2:77423042-77423061 | Msa1078480:intron | 50.0% | |
GAACAAGTGTTACCGCTGTG+GGG | - | chr7_2:77423067-77423086 | Msa1078480:intron | 50.0% | |
ATTGAGGTAGGCCATGGTGT+TGG | - | chr7_2:77423133-77423152 | Msa1078480:intron | 50.0% | |
TTGAGGTAGGCCATGGTGTT+GGG | - | chr7_2:77423134-77423153 | Msa1078480:intron | 50.0% | |
! | CGAAGTGTTTCACGTTCTCC+AGG | - | chr7_2:77423282-77423301 | Msa1078480:intron | 50.0% |
GGACTCCGTGATCTATCTGA+AGG | + | chr7_2:77423558-77423577 | None:intergenic | 50.0% | |
!! | CTCTTTTGTGGACTGCCTTC+AGG | + | chr7_2:77423615-77423634 | None:intergenic | 50.0% |
! | CACAAAAGAGCGCATCTCCT+GGG | - | chr7_2:77423625-77423644 | Msa1078480:CDS | 50.0% |
CGCATCTCCTGGGAATGATA+GGG | - | chr7_2:77423635-77423654 | Msa1078480:CDS | 50.0% | |
ATCTCCTGGGAATGATAGGG+TGG | - | chr7_2:77423638-77423657 | Msa1078480:CDS | 50.0% | |
TGTCATCATCCTCCTCTACG+GGG | + | chr7_2:77423809-77423828 | None:intergenic | 50.0% | |
ACGAACTCGTTCCCGTGATC+TGG | - | chr7_2:77420729-77420748 | Msa1078480:CDS | 55.0% | |
TGAAGACCCGCTCCAGATCA+CGG | + | chr7_2:77420744-77420763 | None:intergenic | 55.0% | |
GAGCGGGTCTTCAGCAGATA+TGG | - | chr7_2:77420751-77420770 | Msa1078480:CDS | 55.0% | |
CCAAACAGGCCCACAGACAA+TGG | + | chr7_2:77421083-77421102 | None:intergenic | 55.0% | |
CCATTGTCTGTGGGCCTGTT+TGG | - | chr7_2:77421080-77421099 | Msa1078480:CDS | 55.0% | |
CGGTTCCCACGCATAACATG+AGG | + | chr7_2:77421464-77421483 | None:intergenic | 55.0% | |
TCACTAAACCCGGAGGTCTG+TGG | - | chr7_2:77421539-77421558 | Msa1078480:intron | 55.0% | |
TAAACCCGGAGGTCTGTGGT+GGG | - | chr7_2:77421543-77421562 | Msa1078480:intron | 55.0% | |
! | GGGTGGCCTTGGTGTAATCT+TGG | - | chr7_2:77421567-77421586 | Msa1078480:intron | 55.0% |
CATCTCGAACGCTGCGGAAA+TGG | + | chr7_2:77421769-77421788 | None:intergenic | 55.0% | |
TTTCCGCAGCGTTCGAGATG+TGG | - | chr7_2:77421769-77421788 | Msa1078480:intron | 55.0% | |
CCCGTGATTCTCGGGATTCT+AGG | - | chr7_2:77422946-77422965 | Msa1078480:intron | 55.0% | |
!! | ACTGTGGCATTGATGGCCAC+TGG | - | chr7_2:77423015-77423034 | Msa1078480:intron | 55.0% |
!! | CTGTGGCATTGATGGCCACT+GGG | - | chr7_2:77423016-77423035 | Msa1078480:intron | 55.0% |
CTTTGCAATCTCGAGCCCAG+TGG | + | chr7_2:77423034-77423053 | None:intergenic | 55.0% | |
TGGGCTCGAGATTGCAAAGC+TGG | - | chr7_2:77423035-77423054 | Msa1078480:intron | 55.0% | |
GGGCTCGAGATTGCAAAGCT+GGG | - | chr7_2:77423036-77423055 | Msa1078480:intron | 55.0% | |
GGCTCGAGATTGCAAAGCTG+GGG | - | chr7_2:77423037-77423056 | Msa1078480:intron | 55.0% | |
TATGACCTCTCTCCCCACAG+CGG | + | chr7_2:77423082-77423101 | None:intergenic | 55.0% | |
! | TGAGGTAGGCCATGGTGTTG+GGG | - | chr7_2:77423135-77423154 | Msa1078480:intron | 55.0% |
AGCTTGGAACCCCAACACCA+TGG | + | chr7_2:77423147-77423166 | None:intergenic | 55.0% | |
! | ATGGTGTTGGGGTTCCAAGC+TGG | - | chr7_2:77423146-77423165 | Msa1078480:intron | 55.0% |
GTGTTTCACGTTCTCCAGGC+AGG | - | chr7_2:77423286-77423305 | Msa1078480:intron | 55.0% | |
TCTCCTAGGAGAACGAGACC+TGG | + | chr7_2:77423343-77423362 | None:intergenic | 55.0% | |
AGGTCTCGTTCTCCTAGGAG+AGG | - | chr7_2:77423342-77423361 | Msa1078480:intron | 55.0% | |
ACTGACCTATAGCTGCGAGC+CGG | + | chr7_2:77423393-77423412 | None:intergenic | 55.0% | |
GACAGGAGATCTTGATCGGC+TGG | + | chr7_2:77423514-77423533 | None:intergenic | 55.0% | |
GGGCTTCGATCTCTTCTGAC+AGG | + | chr7_2:77423531-77423550 | None:intergenic | 55.0% | |
!! | TTCCTTGACTTGGAAGGCGG+AGG | + | chr7_2:77423579-77423598 | None:intergenic | 55.0% |
! | CCAGGAGATGCGCTCTTTTG+TGG | + | chr7_2:77423627-77423646 | None:intergenic | 55.0% |
! | CCACAAAAGAGCGCATCTCC+TGG | - | chr7_2:77423624-77423643 | Msa1078480:CDS | 55.0% |
GCGCATCTCCTGGGAATGAT+AGG | - | chr7_2:77423634-77423653 | Msa1078480:CDS | 55.0% | |
GCAACCACCCTATCATTCCC+AGG | + | chr7_2:77423645-77423664 | None:intergenic | 55.0% | |
AGGGTGGTTGCAACCCAAGA+TGG | - | chr7_2:77423654-77423673 | Msa1078480:CDS | 55.0% | |
GGGTGGTTGCAACCCAAGAT+GGG | - | chr7_2:77423655-77423674 | Msa1078480:CDS | 55.0% | |
TGAAGAGCAGAAGCCCCTCA+AGG | - | chr7_2:77423703-77423722 | Msa1078480:exon | 55.0% | |
GAAGAGCAGAAGCCCCTCAA+GGG | - | chr7_2:77423704-77423723 | Msa1078480:exon | 55.0% | |
!! | TGCTGCGCCCATTAGCCTTA+GGG | + | chr7_2:77423743-77423762 | None:intergenic | 55.0% |
CTCGTTCCCGTGATCTGGAG+CGG | - | chr7_2:77420734-77420753 | Msa1078480:CDS | 60.0% | |
! | TCGTTCCCGTGATCTGGAGC+GGG | - | chr7_2:77420735-77420754 | Msa1078480:CDS | 60.0% |
GAAGACCCGCTCCAGATCAC+GGG | + | chr7_2:77420743-77420762 | None:intergenic | 60.0% | |
!! | CCTGGGGTGCCATTGTCTGT+GGG | - | chr7_2:77421071-77421090 | Msa1078480:CDS | 60.0% |
CTAAACCCGGAGGTCTGTGG+TGG | - | chr7_2:77421542-77421561 | Msa1078480:intron | 60.0% | |
CTCGGGGTTCCCGTGATTCT+CGG | - | chr7_2:77422937-77422956 | Msa1078480:intron | 60.0% | |
TCGGGGTTCCCGTGATTCTC+GGG | - | chr7_2:77422938-77422957 | Msa1078480:intron | 60.0% | |
AAGCAGCGTCCAGATCCAGG+AGG | + | chr7_2:77422993-77423012 | None:intergenic | 60.0% | |
TGTTACCGCTGTGGGGAGAG+AGG | - | chr7_2:77423074-77423093 | Msa1078480:intron | 60.0% | |
CTAGGAGAACGAGACCTGGC+TGG | + | chr7_2:77423339-77423358 | None:intergenic | 60.0% | |
CAGCCAGGTCTCGTTCTCCT+AGG | - | chr7_2:77423337-77423356 | Msa1078480:intron | 60.0% | |
TCACGGCTTCTGCCTCTCCT+AGG | + | chr7_2:77423357-77423376 | None:intergenic | 60.0% | |
CCGGGCTGTAGCTTCTGTCA+CGG | + | chr7_2:77423374-77423393 | None:intergenic | 60.0% | |
CCGTGACAGAAGCTACAGCC+CGG | - | chr7_2:77423371-77423390 | Msa1078480:intron | 60.0% | |
CTGACCTATAGCTGCGAGCC+GGG | + | chr7_2:77423392-77423411 | None:intergenic | 60.0% | |
GTCCTCCGCCTTCCAAGTCA+AGG | - | chr7_2:77423574-77423593 | Msa1078480:intron | 60.0% | |
!! | CTGCTGCGCCCATTAGCCTT+AGG | + | chr7_2:77423744-77423763 | None:intergenic | 60.0% |
TATCCTCATCCCTGGGGCTG+CGG | + | chr7_2:77423782-77423801 | None:intergenic | 60.0% | |
GGCTCCTATCCTCATCCCTG+GGG | + | chr7_2:77423788-77423807 | None:intergenic | 60.0% | |
GGGCTCCTATCCTCATCCCT+GGG | + | chr7_2:77423789-77423808 | None:intergenic | 60.0% | |
TGAGGATAGGAGCCCCGTAG+AGG | - | chr7_2:77423794-77423813 | Msa1078480:intron | 60.0% | |
AATGAGCTCAGGACTCGGCC+AGG | - | chr7_2:77423873-77423892 | Msa1078480:intron | 60.0% | |
!! | GCCTGGGGTGCCATTGTCTG+TGG | - | chr7_2:77421070-77421089 | Msa1078480:CDS | 65.0% |
CCCACAGACAATGGCACCCC+AGG | + | chr7_2:77421074-77421093 | None:intergenic | 65.0% | |
GCGTGGGAACCGTATCCCAC+AGG | - | chr7_2:77421472-77421491 | Msa1078480:intron | 65.0% | |
ACCCTCCCACCACAGACCTC+CGG | + | chr7_2:77421551-77421570 | None:intergenic | 65.0% | |
CGAGAATCACGGGAACCCCG+AGG | + | chr7_2:77422939-77422958 | None:intergenic | 65.0% | |
TTGGGTCGAGGTCCACCTCC+TGG | - | chr7_2:77422975-77422994 | Msa1078480:intron | 65.0% | |
CGAGGTCCACCTCCTGGATC+TGG | - | chr7_2:77422981-77423000 | Msa1078480:intron | 65.0% | |
CAGCGTCCAGATCCAGGAGG+TGG | + | chr7_2:77422990-77423009 | None:intergenic | 65.0% | |
GCTGGAGAACGTGACCTGCC+TGG | + | chr7_2:77423303-77423322 | None:intergenic | 65.0% | |
GCAGGTCACGTTCTCCAGCC+AGG | - | chr7_2:77423304-77423323 | Msa1078480:intron | 65.0% | |
GCTGGAGAACGAGACCTGGC+TGG | + | chr7_2:77423321-77423340 | None:intergenic | 65.0% | |
CCTGGCTGGAGAACGAGACC+TGG | + | chr7_2:77423325-77423344 | None:intergenic | 65.0% | |
CCAGGTCTCGTTCTCCAGCC+AGG | - | chr7_2:77423322-77423341 | Msa1078480:intron | 65.0% | |
! | ACAGCCCGGCTCGCAGCTAT+AGG | - | chr7_2:77423385-77423404 | Msa1078480:intron | 65.0% |
GCAGCCCCAGGGATGAGGAT+AGG | - | chr7_2:77423781-77423800 | Msa1078480:intron | 65.0% | |
GGGGCTCCTATCCTCATCCC+TGG | + | chr7_2:77423790-77423809 | None:intergenic | 65.0% | |
GGATAGGAGCCCCGTAGAGG+AGG | - | chr7_2:77423797-77423816 | Msa1078480:intron | 65.0% | |
! | ACCCGGAGGTCTGTGGTGGG+AGG | - | chr7_2:77421546-77421565 | Msa1078480:intron | 70.0% |
CCCTCCCACCACAGACCTCC+GGG | + | chr7_2:77421550-77421569 | None:intergenic | 70.0% | |
! | CCCGGAGGTCTGTGGTGGGA+GGG | - | chr7_2:77421547-77421566 | Msa1078480:intron | 70.0% |
! | GGAGGTCTGTGGTGGGAGGG+TGG | - | chr7_2:77421550-77421569 | Msa1078480:intron | 70.0% |
! | CTGTGGTGGGAGGGTGGCCT+TGG | - | chr7_2:77421556-77421575 | Msa1078480:intron | 70.0% |
TGGGGCTGCGGCTGCGGCTT+CGG | + | chr7_2:77423770-77423789 | None:intergenic | 75.0% | |
AAGCCGCAGCCGCAGCCCCA+GGG | - | chr7_2:77423770-77423789 | Msa1078480:intron | 75.0% | |
CATCCCTGGGGCTGCGGCTG+CGG | + | chr7_2:77423776-77423795 | None:intergenic | 75.0% | |
CAGCCGCAGCCCCAGGGATG+AGG | - | chr7_2:77423776-77423795 | Msa1078480:intron | 75.0% | |
! | GAAGCCGCAGCCGCAGCCCC+AGG | - | chr7_2:77423769-77423788 | Msa1078480:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 77420191 | 77424187 | 77420191 | ID=Msa1078480;Name=Msa1078480 |
chr7_2 | mRNA | 77420191 | 77424187 | 77420191 | ID=Msa1078480-mRNA-1;Parent=Msa1078480;Name=Msa1078480-mRNA-1;_AED=0.23;_eAED=0.23;_QI=103|1|1|1|0.83|0.71|7|333|307 |
chr7_2 | exon | 77420191 | 77420863 | 77420191 | ID=Msa1078480-mRNA-1:exon:19007;Parent=Msa1078480-mRNA-1 |
chr7_2 | exon | 77420972 | 77421106 | 77420972 | ID=Msa1078480-mRNA-1:exon:19006;Parent=Msa1078480-mRNA-1 |
chr7_2 | exon | 77421240 | 77421445 | 77421240 | ID=Msa1078480-mRNA-1:exon:19005;Parent=Msa1078480-mRNA-1 |
chr7_2 | exon | 77422300 | 77422395 | 77422300 | ID=Msa1078480-mRNA-1:exon:19004;Parent=Msa1078480-mRNA-1 |
chr7_2 | exon | 77422561 | 77422600 | 77422561 | ID=Msa1078480-mRNA-1:exon:19003;Parent=Msa1078480-mRNA-1 |
chr7_2 | exon | 77423602 | 77423724 | 77423602 | ID=Msa1078480-mRNA-1:exon:19002;Parent=Msa1078480-mRNA-1 |
chr7_2 | exon | 77424101 | 77424187 | 77424101 | ID=Msa1078480-mRNA-1:exon:19001;Parent=Msa1078480-mRNA-1 |
chr7_2 | five_prime_UTR | 77424101 | 77424187 | 77424101 | ID=Msa1078480-mRNA-1:five_prime_utr;Parent=Msa1078480-mRNA-1 |
chr7_2 | five_prime_UTR | 77423709 | 77423724 | 77423709 | ID=Msa1078480-mRNA-1:five_prime_utr;Parent=Msa1078480-mRNA-1 |
chr7_2 | CDS | 77423602 | 77423708 | 77423602 | ID=Msa1078480-mRNA-1:cds;Parent=Msa1078480-mRNA-1 |
chr7_2 | CDS | 77422561 | 77422600 | 77422561 | ID=Msa1078480-mRNA-1:cds;Parent=Msa1078480-mRNA-1 |
chr7_2 | CDS | 77422300 | 77422395 | 77422300 | ID=Msa1078480-mRNA-1:cds;Parent=Msa1078480-mRNA-1 |
chr7_2 | CDS | 77421240 | 77421445 | 77421240 | ID=Msa1078480-mRNA-1:cds;Parent=Msa1078480-mRNA-1 |
chr7_2 | CDS | 77420972 | 77421106 | 77420972 | ID=Msa1078480-mRNA-1:cds;Parent=Msa1078480-mRNA-1 |
chr7_2 | CDS | 77420524 | 77420863 | 77420524 | ID=Msa1078480-mRNA-1:cds;Parent=Msa1078480-mRNA-1 |
chr7_2 | three_prime_UTR | 77420191 | 77420523 | 77420191 | ID=Msa1078480-mRNA-1:three_prime_utr;Parent=Msa1078480-mRNA-1 |
Gene Sequence |
Protein sequence |