Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702670 | XP_003617201.1 | 63.158 | 228 | 45 | 4 | 28 | 220 | 18 | 241 | 5.38e-74 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702670 | sp|P25011|CCNB1_SOYBN | 53.922 | 102 | 42 | 2 | 107 | 206 | 159 | 257 | 1.03e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702670 | G7KCT9 | 63.158 | 228 | 45 | 4 | 28 | 220 | 18 | 241 | 2.57e-74 | 247 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053700 | Msa0702670 | 0.800398 | 1.468391e-48 | -8.615850e-47 |
| Msa0070170 | Msa0702670 | 0.800050 | 1.728409e-48 | -8.615850e-47 |
| Msa0661710 | Msa0702670 | 0.808828 | 2.556201e-50 | -8.615850e-47 |
| Msa0702580 | Msa0702670 | 0.961543 | 7.977509e-120 | -8.615850e-47 |
| Msa0702670 | Msa0747170 | 0.926142 | 7.034751e-91 | -8.615850e-47 |
| Msa0702670 | Msa1279590 | 0.815281 | 1.001840e-51 | -8.615850e-47 |
| Msa0702670 | Msa1289300 | 0.836865 | 7.284216e-57 | -8.615850e-47 |
| Msa0702670 | Msa1297600 | 0.841261 | 5.289990e-58 | -8.615850e-47 |
| Msa0164370 | Msa0702670 | 0.848686 | 5.232598e-60 | -8.615850e-47 |
| Msa0186310 | Msa0702670 | 0.813544 | 2.426171e-51 | -8.615850e-47 |
| Msa0364990 | Msa0702670 | 0.810080 | 1.376980e-50 | -8.615850e-47 |
| Msa0414020 | Msa0702670 | 0.819637 | 1.046257e-52 | -8.615850e-47 |
| Msa0337510 | Msa0702670 | 0.813675 | 2.270202e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702670 | MtrunA17_Chr5g0441371 | 63.158 | 228 | 45 | 4 | 28 | 220 | 18 | 241 | 4.95e-78 | 247 |
| Msa0702670 | MtrunA17_Chr7g0255771 | 42.748 | 131 | 68 | 4 | 94 | 222 | 152 | 277 | 7.47e-26 | 108 |
| Msa0702670 | MtrunA17_Chr4g0000341 | 97.561 | 41 | 1 | 0 | 254 | 294 | 194 | 234 | 5.90e-18 | 85.9 |
| Msa0702670 | MtrunA17_Chr1g0174851 | 81.633 | 49 | 9 | 0 | 313 | 361 | 104 | 152 | 3.27e-17 | 81.6 |
| Msa0702670 | MtrunA17_Chr5g0406741 | 48.101 | 79 | 40 | 1 | 123 | 200 | 155 | 233 | 2.62e-14 | 74.3 |
| Msa0702670 | MtrunA17_Chr8g0370671 | 44.048 | 84 | 46 | 1 | 118 | 200 | 154 | 237 | 6.01e-13 | 70.1 |
| Msa0702670 | MtrunA17_Chr7g0258451 | 68.085 | 47 | 15 | 0 | 313 | 359 | 115 | 161 | 8.65e-13 | 70.1 |
| Msa0702670 | MtrunA17_Chr8g0357001 | 47.826 | 69 | 35 | 1 | 133 | 200 | 479 | 547 | 5.34e-12 | 67.8 |
| Msa0702670 | MtrunA17_Chr3g0125051 | 40.952 | 105 | 48 | 5 | 102 | 199 | 209 | 306 | 7.24e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702670 | AT2G26760.1 | 39.655 | 174 | 95 | 5 | 28 | 196 | 18 | 186 | 2.56e-27 | 112 |
| Msa0702670 | AT1G34460.9 | 36.864 | 236 | 113 | 10 | 2 | 206 | 91 | 321 | 2.10e-26 | 110 |
| Msa0702670 | AT1G34460.7 | 39.594 | 197 | 87 | 8 | 39 | 206 | 142 | 335 | 9.04e-25 | 106 |
| Msa0702670 | AT1G34460.6 | 39.594 | 197 | 87 | 8 | 39 | 206 | 142 | 335 | 1.05e-24 | 106 |
| Msa0702670 | AT1G34460.3 | 39.594 | 197 | 87 | 8 | 39 | 206 | 142 | 335 | 1.05e-24 | 106 |
| Msa0702670 | AT1G34460.8 | 39.594 | 197 | 87 | 8 | 39 | 206 | 142 | 335 | 1.05e-24 | 106 |
| Msa0702670 | AT1G34460.1 | 39.594 | 197 | 87 | 8 | 39 | 206 | 142 | 335 | 1.05e-24 | 106 |
| Msa0702670 | AT1G34460.5 | 39.594 | 197 | 87 | 8 | 39 | 206 | 142 | 335 | 1.05e-24 | 106 |
| Msa0702670 | AT1G34460.2 | 39.086 | 197 | 85 | 7 | 39 | 206 | 142 | 332 | 2.67e-24 | 104 |
| Msa0702670 | AT1G34460.4 | 39.086 | 197 | 85 | 7 | 39 | 206 | 142 | 332 | 2.67e-24 | 104 |
| Msa0702670 | AT5G06150.2 | 34.043 | 235 | 100 | 9 | 39 | 222 | 30 | 260 | 2.46e-22 | 97.4 |
| Msa0702670 | AT5G06150.1 | 34.043 | 235 | 100 | 9 | 39 | 222 | 30 | 260 | 1.14e-21 | 97.1 |
| Msa0702670 | AT4G37490.1 | 48.077 | 104 | 49 | 2 | 107 | 208 | 130 | 230 | 3.58e-21 | 95.1 |
| Msa0702670 | AT1G76310.4 | 47.525 | 101 | 49 | 2 | 123 | 222 | 160 | 257 | 1.72e-16 | 80.5 |
| Msa0702670 | AT1G78900.1 | 87.805 | 41 | 5 | 0 | 254 | 294 | 193 | 233 | 2.78e-16 | 81.3 |
| Msa0702670 | AT1G78900.2 | 87.805 | 41 | 5 | 0 | 254 | 294 | 193 | 233 | 2.78e-16 | 81.3 |
| Msa0702670 | AT1G76310.1 | 40.602 | 133 | 74 | 3 | 92 | 222 | 128 | 257 | 3.48e-16 | 80.5 |
| Msa0702670 | AT1G76310.2 | 40.602 | 133 | 74 | 3 | 92 | 222 | 128 | 257 | 4.12e-16 | 79.7 |
| Msa0702670 | AT1G76310.3 | 40.602 | 133 | 74 | 3 | 92 | 222 | 128 | 257 | 4.61e-16 | 80.1 |
| Msa0702670 | AT3G11520.1 | 48.810 | 84 | 40 | 1 | 125 | 208 | 144 | 224 | 5.87e-16 | 79.7 |
| Msa0702670 | AT3G11520.2 | 48.810 | 84 | 40 | 1 | 125 | 208 | 144 | 224 | 7.42e-16 | 79.0 |
| Msa0702670 | AT1G20610.1 | 41.379 | 116 | 62 | 3 | 92 | 206 | 131 | 241 | 1.76e-14 | 75.1 |
| Msa0702670 | AT4G35620.2 | 53.333 | 75 | 34 | 1 | 123 | 196 | 155 | 229 | 3.74e-14 | 73.9 |
| Msa0702670 | AT4G35620.1 | 53.333 | 75 | 34 | 1 | 123 | 196 | 155 | 229 | 4.12e-14 | 73.9 |
| Msa0702670 | AT2G17620.1 | 49.351 | 77 | 38 | 1 | 125 | 200 | 156 | 232 | 4.84e-13 | 70.9 |
| Msa0702670 | AT1G44110.1 | 47.126 | 87 | 38 | 4 | 120 | 199 | 175 | 260 | 5.35e-11 | 64.7 |
Find 122 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCACTGAATTCTGATTTA+TGG | 0.102129 | 4_4:-74400102 | Msa0702670:intron |
| CCGGGTTGATCACAAGATTT+TGG | 0.152119 | 4_4:+74398583 | None:intergenic |
| AGATCCAAATCCATCTAATA+TGG | 0.211757 | 4_4:+74397816 | None:intergenic |
| GAACATTGATTCATCTTATA+AGG | 0.243622 | 4_4:-74398139 | Msa0702670:CDS |
| CTTTATACAATTCTTGTATA+AGG | 0.244151 | 4_4:+74398932 | None:intergenic |
| TGAGAATAAGAAAAGGAATA+TGG | 0.262382 | 4_4:-74398643 | Msa0702670:CDS |
| TATTTATTGCCCATATTAGA+TGG | 0.270388 | 4_4:-74397826 | Msa0702670:CDS |
| GCATCAGCCATGGCTGCTTT+TGG | 0.282508 | 4_4:-74393610 | Msa0702670:three_prime_UTR |
| TTGCCCATATTAGATGGATT+TGG | 0.295045 | 4_4:-74397820 | Msa0702670:CDS |
| CTCATCTTAGCATTTATATC+TGG | 0.296448 | 4_4:+74397925 | None:intergenic |
| AAAATTATGATACCTGTAAA+TGG | 0.306248 | 4_4:+74399033 | None:intergenic |
| TTTGCATGTGTGAAATTTGA+TGG | 0.321188 | 4_4:+74400184 | None:intergenic |
| ACATCTTAAAAGCCATTTAC+AGG | 0.331557 | 4_4:-74399045 | Msa0702670:intron |
| TTGTTATATCCTTCGCATAA+TGG | 0.337376 | 4_4:-74393644 | Msa0702670:three_prime_UTR |
| GGAGATCTGCCAAGTTCATT+TGG | 0.337571 | 4_4:-74395918 | Msa0702670:CDS |
| GCCGATACTCCTCTTCTTAC+TGG | 0.357840 | 4_4:-74397038 | Msa0702670:CDS |
| CAAATGTACCTTGTTCTTCT+CGG | 0.360513 | 4_4:+74398386 | None:intergenic |
| TTGTTGCAGGGCTCAGTTAG+AGG | 0.361146 | 4_4:-74398427 | Msa0702670:intron |
| TAGAGTTGTGCCCAAGGATT+TGG | 0.364250 | 4_4:-74398166 | Msa0702670:CDS |
| TCATCAGAAGAACGCTTTGC+GGG | 0.383815 | 4_4:+74393829 | None:intergenic |
| TACCTTGTTCTTCTCGGTTG+CGG | 0.393742 | 4_4:+74398392 | None:intergenic |
| TTACATAGAACATACCTTAT+GGG | 0.397491 | 4_4:+74399731 | None:intergenic |
| TCAGCACCTTGTGAGGCATT+TGG | 0.410825 | 4_4:+74398533 | None:intergenic |
| GTGATCAACCCGGCAGATCT+TGG | 0.415654 | 4_4:-74398573 | Msa0702670:CDS |
| TTTAATTTCTTTGCCCAACT+TGG | 0.419752 | 4_4:+74393750 | None:intergenic |
| AAAATACCCAAGGATGAAAC+TGG | 0.424434 | 4_4:+74393718 | None:intergenic |
| GAGAATAAGAAAAGGAATAT+GGG | 0.425859 | 4_4:-74398642 | Msa0702670:CDS |
| ATATGATACAAAGAGTAATC+TGG | 0.431534 | 4_4:+74393426 | None:intergenic |
| ATGAGGGTGATGGAGATTCC+AGG | 0.435593 | 4_4:-74399080 | Msa0702670:CDS |
| ACTTGTTAGATCATTAGATT+AGG | 0.443257 | 4_4:+74400141 | None:intergenic |
| AATGTTCTCAACCAAATCCT+TGG | 0.445831 | 4_4:+74398155 | None:intergenic |
| AAGATCCTCACTTACATCCT+TGG | 0.447048 | 4_4:+74394489 | None:intergenic |
| GCTAGCAGAATCATAATTGA+AGG | 0.450621 | 4_4:-74399398 | Msa0702670:intron |
| TACTCCTCTTCTTACTGGTC+AGG | 0.451031 | 4_4:-74397033 | Msa0702670:intron |
| CTGGATGACTCTATAAGTTA+TGG | 0.451615 | 4_4:+74397657 | None:intergenic |
| GAGGACACTAGAGTGGGAAT+TGG | 0.456363 | 4_4:-74399438 | Msa0702670:five_prime_UTR |
| ATCACCCTCATCAAACGCTT+TGG | 0.464468 | 4_4:+74399092 | None:intergenic |
| AAGTGACCAGTTTCATCCTT+GGG | 0.464945 | 4_4:-74393724 | Msa0702670:three_prime_UTR |
| TGAGATCAATTCTTATTGAC+TGG | 0.470841 | 4_4:-74397906 | Msa0702670:CDS |
| TCCTTGGATAAGAGCCGCTC+TGG | 0.474125 | 4_4:+74394505 | None:intergenic |
| CAGCAAAATTATTATAAGAA+AGG | 0.477942 | 4_4:+74395940 | None:intergenic |
| TATGATAATTTCATCCCATA+AGG | 0.480276 | 4_4:-74399745 | Msa0702670:intron |
| ATCAAGGAACCAAATGAACT+TGG | 0.480717 | 4_4:+74395909 | None:intergenic |
| TTTCTTGGTGGCCTTGAGCA+TGG | 0.482520 | 4_4:-74397273 | Msa0702670:CDS |
| GATCCAAATCCATCTAATAT+GGG | 0.482648 | 4_4:+74397817 | None:intergenic |
| AGATGTTCCAAAGTGAGTCC+TGG | 0.483831 | 4_4:+74399062 | None:intergenic |
| CAATCTACCAAGGTTTATCA+AGG | 0.486049 | 4_4:+74395893 | None:intergenic |
| AAAGAAGTTCACCATGCCTC+AGG | 0.486057 | 4_4:-74397199 | Msa0702670:intron |
| TGTGCAATCACTGCAACAAC+AGG | 0.487175 | 4_4:-74395302 | Msa0702670:CDS |
| GCATTAGCACCAAGATCTGC+CGG | 0.492988 | 4_4:+74398564 | None:intergenic |
| CAGGAAATTTGAACTCATGC+TGG | 0.497776 | 4_4:-74397869 | Msa0702670:CDS |
| TTCATCAGAAGAACGCTTTG+CGG | 0.499048 | 4_4:+74393828 | None:intergenic |
| ATGTAGACTAATAATAAGAA+TGG | 0.500817 | 4_4:-74398217 | Msa0702670:CDS |
| TGTTCGTGTGCATGATTACA+TGG | 0.502047 | 4_4:-74397956 | Msa0702670:CDS |
| GAAGTGACCAGTTTCATCCT+TGG | 0.503118 | 4_4:-74393725 | Msa0702670:three_prime_UTR |
| GGAGATTCCAGGACTCACTT+TGG | 0.503348 | 4_4:-74399069 | Msa0702670:CDS |
| GCATGTTCCACCCTTGCTGC+AGG | 0.503352 | 4_4:+74398249 | None:intergenic |
| CAATGAGTGGAAGCTCAGTC+AGG | 0.503878 | 4_4:+74395701 | None:intergenic |
| AAATTTCATAAGCAAAGAGC+TGG | 0.505500 | 4_4:+74397638 | None:intergenic |
| TGGCGGAAGAAAACTGTGTC+AGG | 0.509632 | 4_4:+74393770 | None:intergenic |
| GAATAAATATGTTATGCTGC+AGG | 0.509686 | 4_4:+74395737 | None:intergenic |
| AATTTCTTTGCCCAACTTGG+CGG | 0.517688 | 4_4:+74393753 | None:intergenic |
| TTTGGTTCCTTGATAAACCT+TGG | 0.519319 | 4_4:-74395900 | Msa0702670:CDS |
| ATGTTCTCAACCAAATCCTT+GGG | 0.520528 | 4_4:+74398156 | None:intergenic |
| TTATCTCCTCATGTTGTGAA+TGG | 0.521527 | 4_4:-74394587 | Msa0702670:three_prime_UTR |
| TTGTAGTGAGAGAAAGTTGG+TGG | 0.526805 | 4_4:+74400301 | None:intergenic |
| TGTGTAGGTATGAAGAGGGC+TGG | 0.527850 | 4_4:-74399914 | Msa0702670:intron |
| ACAGGCCTCGGTGTACGTAC+AGG | 0.529911 | 4_4:+74397077 | None:intergenic |
| ACTGGTTGATTGAAGTGTAC+AGG | 0.534093 | 4_4:-74397888 | Msa0702670:CDS |
| CATTGTTCCTGCAGCAAGGG+TGG | 0.537294 | 4_4:-74398256 | Msa0702670:CDS |
| AAACTGTGTCAGGTTACAAT+CGG | 0.540666 | 4_4:+74393780 | None:intergenic |
| GTTTGATAGTTGAACTGCCA+TGG | 0.541365 | 4_4:-74394529 | Msa0702670:three_prime_UTR |
| GCCGTGTTTGAGAAGAGAGA+AGG | 0.547222 | 4_4:+74400228 | None:intergenic |
| CACTAGAGTGGGAATTGGCA+AGG | 0.548048 | 4_4:-74399433 | Msa0702670:five_prime_UTR |
| ATAAGAGCCGCTCTGGTCCA+TGG | 0.552906 | 4_4:+74394512 | None:intergenic |
| TCCTTCTCTCTTCTCAAACA+CGG | 0.555466 | 4_4:-74400229 | Msa0702670:five_prime_UTR |
| GTGTTGGAACTTGAGTTTCA+AGG | 0.559419 | 4_4:-74397228 | Msa0702670:CDS |
| AGAATAAGAAAAGGAATATG+GGG | 0.559606 | 4_4:-74398641 | Msa0702670:CDS |
| CACCTAACCAAAAGCAGCCA+TGG | 0.562153 | 4_4:+74393603 | None:intergenic |
| ACCAGTAAGAAGAGGAGTAT+CGG | 0.562952 | 4_4:+74397037 | None:intergenic |
| AGAACATTGTTCCTGCAGCA+AGG | 0.565140 | 4_4:-74398260 | Msa0702670:CDS |
| TTGATTGTGTAGGTATGAAG+AGG | 0.565183 | 4_4:-74399919 | Msa0702670:intron |
| TGCTTGTAGAGTTGTGCCCA+AGG | 0.568487 | 4_4:-74398172 | Msa0702670:CDS |
| ACCATAAATCAGAATTCAGT+GGG | 0.570045 | 4_4:+74400101 | None:intergenic |
| TTCCTCTCTTACCATGCTCA+AGG | 0.571680 | 4_4:+74397262 | None:intergenic |
| TTGCGAAGTTATTTGATCTG+CGG | 0.573378 | 4_4:-74393673 | Msa0702670:three_prime_UTR |
| GAACATTGTTCCTGCAGCAA+GGG | 0.574930 | 4_4:-74398259 | Msa0702670:CDS |
| GAGGAGAGAGGACACTAGAG+TGG | 0.575461 | 4_4:-74399445 | Msa0702670:five_prime_UTR |
| AGCTCAGTCAGGTATGTGAC+TGG | 0.576186 | 4_4:+74395712 | None:intergenic |
| GGCCTTGAGCATGGTAAGAG+AGG | 0.580399 | 4_4:-74397264 | Msa0702670:CDS |
| AAAGCGTTTGATGAGGGTGA+TGG | 0.580444 | 4_4:-74399090 | Msa0702670:exon |
| CATTAGCACCAAGATCTGCC+GGG | 0.580889 | 4_4:+74398565 | None:intergenic |
| ATGTGTGAAATTTGATGGAA+AGG | 0.582799 | 4_4:+74400189 | None:intergenic |
| AATTAGGTGAGAATAAGAAA+AGG | 0.583677 | 4_4:-74398650 | Msa0702670:intron |
| AATAACTTCGCAAGATACAA+TGG | 0.587194 | 4_4:+74393683 | None:intergenic |
| CAACACCAAAGCGTTTGATG+AGG | 0.592407 | 4_4:-74399097 | Msa0702670:exon |
| TGATTGTGTAGGTATGAAGA+GGG | 0.600487 | 4_4:-74399918 | Msa0702670:intron |
| TATTTATAAGTACAACAAAG+TGG | 0.602644 | 4_4:+74393508 | None:intergenic |
| AGGAGAGAGGACACTAGAGT+GGG | 0.604291 | 4_4:-74399444 | Msa0702670:five_prime_UTR |
| TATGGAATCAGCACCTTGTG+AGG | 0.606345 | 4_4:+74398526 | None:intergenic |
| GCAACTCAGAAATCTGTCAC+TGG | 0.606369 | 4_4:+74399583 | None:intergenic |
| CACCATAAATCAGAATTCAG+TGG | 0.607335 | 4_4:+74400100 | None:intergenic |
| CTTACCTGACCAGTAAGAAG+AGG | 0.608391 | 4_4:+74397029 | None:intergenic |
| AACACCAAAGCGTTTGATGA+GGG | 0.608391 | 4_4:-74399096 | Msa0702670:exon |
| ACCAGAGCGGCTCTTATCCA+AGG | 0.610602 | 4_4:-74394506 | Msa0702670:three_prime_UTR |
| CCAAAATCTTGTGATCAACC+CGG | 0.612472 | 4_4:-74398583 | Msa0702670:CDS |
| TCACATCCATTCACAACATG+AGG | 0.614060 | 4_4:+74394581 | None:intergenic |
| AATCAAAAGCCATTATGCGA+AGG | 0.618602 | 4_4:+74393635 | None:intergenic |
| ATCACTGCAACAACAGGTTG+AGG | 0.619338 | 4_4:-74395296 | Msa0702670:intron |
| AAGATACTTACAATCTACCA+AGG | 0.630917 | 4_4:+74395883 | None:intergenic |
| AGCCGCAACCGAGAAGAACA+AGG | 0.639614 | 4_4:-74398394 | Msa0702670:intron |
| ATAACATACAAATCAATGAG+TGG | 0.640067 | 4_4:+74395688 | None:intergenic |
| ATGTCACCAAATGCCTCACA+AGG | 0.640555 | 4_4:-74398539 | Msa0702670:intron |
| ACTAGAGTGGGAATTGGCAA+GGG | 0.655908 | 4_4:-74399432 | Msa0702670:five_prime_UTR |
| GTGGCCATAAACCTGAGGCA+TGG | 0.663532 | 4_4:+74397188 | None:intergenic |
| GGTTGAAGGAAGAAACAGAA+AGG | 0.663667 | 4_4:-74398619 | Msa0702670:CDS |
| GAGTAAGATTACATTCAGCA+AGG | 0.663833 | 4_4:+74394662 | None:intergenic |
| GAAAGGAGAGAAGAGAAGTG+AGG | 0.670194 | 4_4:+74400206 | None:intergenic |
| GAATAAGAAAAGGAATATGG+GGG | 0.679741 | 4_4:-74398640 | Msa0702670:CDS |
| AGATATCTGCATTATGTGTG+TGG | 0.692302 | 4_4:+74394631 | None:intergenic |
| TGAACTGCCATGGACCAGAG+CGG | 0.740700 | 4_4:-74394519 | Msa0702670:three_prime_UTR |
| GTTGGCCTGTACGTACACCG+AGG | 0.801438 | 4_4:-74397082 | Msa0702670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTAGCAAATAA+TGG | + | chr4_4:74398094-74398113 | None:intergenic | 10.0% |
| !! | ACTTCTATAAAATAATATAA+AGG | - | chr4_4:74398576-74398595 | Msa0702670:CDS | 10.0% |
| !!! | TTTGTTTTTTTTTTTTTTTG+TGG | - | chr4_4:74398674-74398693 | Msa0702670:intron | 10.0% |
| !!! | ACTTCAATTTATTTATTTTT+TGG | - | chr4_4:74398896-74398915 | Msa0702670:intron | 10.0% |
| !! | AAATTGAATGTAAAAATTGT+AGG | - | chr4_4:74394031-74394050 | Msa0702670:intron | 15.0% |
| !!! | AAACTTTTCATATCATAAAT+TGG | + | chr4_4:74394423-74394442 | None:intergenic | 15.0% |
| !!! | TATGAAAAGTTTTTTATTTG+TGG | - | chr4_4:74394431-74394450 | Msa0702670:intron | 15.0% |
| !!! | ATGAAAAGTTTTTTATTTGT+GGG | - | chr4_4:74394432-74394451 | Msa0702670:intron | 15.0% |
| !!! | TGATTGATTTTTAATGAATT+TGG | - | chr4_4:74394555-74394574 | Msa0702670:three_prime_UTR | 15.0% |
| !! | TAATTTCAATTGTAAAGTTA+TGG | + | chr4_4:74395224-74395243 | None:intergenic | 15.0% |
| !! | CAATAAAAACAAATAAAATC+AGG | + | chr4_4:74395282-74395301 | None:intergenic | 15.0% |
| !! | GATTTGTAGAAAATATTAAA+GGG | - | chr4_4:74396184-74396203 | Msa0702670:intron | 15.0% |
| !!! | ACAATTTTTTTCATTAAAAC+GGG | + | chr4_4:74396432-74396451 | None:intergenic | 15.0% |
| !!! | CACAATTTTTTTCATTAAAA+CGG | + | chr4_4:74396433-74396452 | None:intergenic | 15.0% |
| !! | TGTATATTAAGTTATAATGA+AGG | + | chr4_4:74396608-74396627 | None:intergenic | 15.0% |
| !! | TCATTATAACTTAATATACA+TGG | - | chr4_4:74396608-74396627 | Msa0702670:intron | 15.0% |
| !!! | GAAAAGATTTTACTAAATTA+CGG | - | chr4_4:74397927-74397946 | Msa0702670:CDS | 15.0% |
| !!! | AAAAGATTTTACTAAATTAC+GGG | - | chr4_4:74397928-74397947 | Msa0702670:CDS | 15.0% |
| !!! | ATTTTCAACATATTTATTTC+TGG | - | chr4_4:74398162-74398181 | Msa0702670:CDS | 15.0% |
| !!! | ATTTCTGGTTTTTTTTTTTT+TGG | - | chr4_4:74398177-74398196 | Msa0702670:CDS | 15.0% |
| !!! | TTCTTTTCTTATTAGATAAA+TGG | - | chr4_4:74398371-74398390 | Msa0702670:intron | 15.0% |
| !! | TAATTTATTACTACTATTCA+AGG | - | chr4_4:74398489-74398508 | Msa0702670:intron | 15.0% |
| !! | AAATACTTCAATTTAGTTAA+TGG | - | chr4_4:74398925-74398944 | Msa0702670:intron | 15.0% |
| !!! | TGTTTTCATTATATTCTTAA+AGG | - | chr4_4:74399566-74399585 | Msa0702670:intron | 15.0% |
| !! | AAAATTATGATACCTGTAAA+TGG | + | chr4_4:74394699-74394718 | None:intergenic | 20.0% |
| !! | CTTTATACAATTCTTGTATA+AGG | + | chr4_4:74394800-74394819 | None:intergenic | 20.0% |
| !!! | ATTAATTTGTTCTGTGTATA+TGG | - | chr4_4:74394864-74394883 | Msa0702670:intron | 20.0% |
| !!! | TTAATTTGTTCTGTGTATAT+GGG | - | chr4_4:74394865-74394884 | Msa0702670:intron | 20.0% |
| !!! | TGATTTATGCTTTTTGTTAA+TGG | - | chr4_4:74395056-74395075 | Msa0702670:intron | 20.0% |
| !! | TTATAAAGATATACAACATG+TGG | + | chr4_4:74395255-74395274 | None:intergenic | 20.0% |
| !! | TTTAGTGATACAATGTATTA+AGG | + | chr4_4:74395418-74395437 | None:intergenic | 20.0% |
| !!! | TATCACTAAATTTGTTTTGA+TGG | - | chr4_4:74395428-74395447 | Msa0702670:intron | 20.0% |
| !! | ATGTAGACTAATAATAAGAA+TGG | - | chr4_4:74395512-74395531 | Msa0702670:intron | 20.0% |
| !!! | CTTTGCTTATGAAATTTTTA+AGG | - | chr4_4:74396097-74396116 | Msa0702670:intron | 20.0% |
| !! | ATTTATTATATCACATGTTC+AGG | - | chr4_4:74396144-74396163 | Msa0702670:CDS | 20.0% |
| !! | GGATTTGTAGAAAATATTAA+AGG | - | chr4_4:74396183-74396202 | Msa0702670:intron | 20.0% |
| !!! | CGTTTTAATGAAAAAAATTG+TGG | - | chr4_4:74396431-74396450 | Msa0702670:intron | 20.0% |
| !! | TTAAGTTATAATGAAGGATA+AGG | + | chr4_4:74396602-74396621 | None:intergenic | 20.0% |
| !! | AGTGAAGGATTTATATTTAT+TGG | - | chr4_4:74396779-74396798 | Msa0702670:intron | 20.0% |
| !! | ATTTCATTATGTAGTCTAAT+TGG | + | chr4_4:74397661-74397680 | None:intergenic | 20.0% |
| !!! | ATGATTTATTCTTTTCATCA+GGG | - | chr4_4:74397765-74397784 | Msa0702670:intron | 20.0% |
| !! | CAGCAAAATTATTATAAGAA+AGG | + | chr4_4:74397792-74397811 | None:intergenic | 20.0% |
| !!! | CTTTCTTATAATAATTTTGC+TGG | - | chr4_4:74397790-74397809 | Msa0702670:intron | 20.0% |
| !!! | AATCTTTTCTTAGTATAAGA+CGG | + | chr4_4:74397916-74397935 | None:intergenic | 20.0% |
| !! | AAATATGTTGAAAATGTTGT+AGG | + | chr4_4:74398157-74398176 | None:intergenic | 20.0% |
| !!! | TTAATACTTTAAAGATTGCA+AGG | + | chr4_4:74398472-74398491 | None:intergenic | 20.0% |
| !! | AATATTACATCTGATAGAAA+AGG | + | chr4_4:74398823-74398842 | None:intergenic | 20.0% |
| !!! | CTAAAGTGTATAATTTTCTT+TGG | + | chr4_4:74399456-74399475 | None:intergenic | 20.0% |
| !!! | ATAATTAGTATCGAACATAT+AGG | + | chr4_4:74399721-74399740 | None:intergenic | 20.0% |
| !!! | AAGTAATAGTTTTCATATAG+TGG | + | chr4_4:74399770-74399789 | None:intergenic | 20.0% |
| !! | TATTTATAAGTACAACAAAG+TGG | + | chr4_4:74400224-74400243 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTAGAGAGAGAA+GGG | + | chr4_4:74393467-74393486 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTTAGAGAGAGA+AGG | + | chr4_4:74393468-74393487 | None:intergenic | 25.0% |
| !! | ACTTGTTAGATCATTAGATT+AGG | + | chr4_4:74393591-74393610 | None:intergenic | 25.0% |
| !!! | TATGGTGAGTTTTGTTTAAT+TGG | - | chr4_4:74393708-74393727 | Msa0702670:three_prime_UTR | 25.0% |
| !!! | ATGGTGAGTTTTGTTTAATT+GGG | - | chr4_4:74393709-74393728 | Msa0702670:three_prime_UTR | 25.0% |
| ! | GTTAATCTTTGATCAAAAAC+AGG | - | chr4_4:74393865-74393884 | Msa0702670:intron | 25.0% |
| !!! | TGTTTACTGATTTTTTTTCC+AGG | - | chr4_4:74393942-74393961 | Msa0702670:intron | 25.0% |
| ! | TATGATAATTTCATCCCATA+AGG | - | chr4_4:74393984-74394003 | Msa0702670:intron | 25.0% |
| ! | TTACATAGAACATACCTTAT+GGG | + | chr4_4:74394001-74394020 | None:intergenic | 25.0% |
| ! | TTTACATAGAACATACCTTA+TGG | + | chr4_4:74394002-74394021 | None:intergenic | 25.0% |
| !!! | TGGTTTTAGCATAAATTTTC+AGG | - | chr4_4:74394262-74394281 | Msa0702670:intron | 25.0% |
| !!! | TTTTAGCATAAATTTTCAGG+AGG | - | chr4_4:74394265-74394284 | Msa0702670:intron | 25.0% |
| !!! | GATAAGTTTTATGTGTATGT+TGG | - | chr4_4:74394465-74394484 | Msa0702670:intron | 25.0% |
| ! | GTTTAAATTAGTGATTTCCT+GGG | - | chr4_4:74394492-74394511 | Msa0702670:intron | 25.0% |
| !! | TTTTTCATACTATGCATATG+TGG | - | chr4_4:74394603-74394622 | Msa0702670:exon | 25.0% |
| !!! | TTTGAGCTTATTTGATTTTC+TGG | - | chr4_4:74394750-74394769 | Msa0702670:intron | 25.0% |
| !!! | AGATTTTGAAATGAAATCTG+AGG | - | chr4_4:74394904-74394923 | Msa0702670:intron | 25.0% |
| !!! | GATTTTGAAATGAAATCTGA+GGG | - | chr4_4:74394905-74394924 | Msa0702670:intron | 25.0% |
| ! | TTAGGGTTTATGTAATAATC+TGG | - | chr4_4:74394943-74394962 | Msa0702670:intron | 25.0% |
| !!! | TGCTTTTTGTTAATGGAATT+AGG | - | chr4_4:74395063-74395082 | Msa0702670:intron | 25.0% |
| ! | AATTAGGTGAGAATAAGAAA+AGG | - | chr4_4:74395079-74395098 | Msa0702670:intron | 25.0% |
| ! | TGAGAATAAGAAAAGGAATA+TGG | - | chr4_4:74395086-74395105 | Msa0702670:intron | 25.0% |
| ! | GAGAATAAGAAAAGGAATAT+GGG | - | chr4_4:74395087-74395106 | Msa0702670:intron | 25.0% |
| ! | AGAATAAGAAAAGGAATATG+GGG | - | chr4_4:74395088-74395107 | Msa0702670:intron | 25.0% |
| !!! | TTTGTTTTTATTGTTGTTGC+AGG | - | chr4_4:74395289-74395308 | Msa0702670:intron | 25.0% |
| !!! | TTGTTTTTATTGTTGTTGCA+GGG | - | chr4_4:74395290-74395309 | Msa0702670:intron | 25.0% |
| !! | TTACTTTGTTCCATTTTCAA+AGG | - | chr4_4:74395384-74395403 | Msa0702670:intron | 25.0% |
| !!! | GAACATTGATTCATCTTATA+AGG | - | chr4_4:74395590-74395609 | Msa0702670:intron | 25.0% |
| ! | TATTTATTGCCCATATTAGA+TGG | - | chr4_4:74395903-74395922 | Msa0702670:CDS | 25.0% |
| !! | TTTTGTCAAAAAAGATATGC+AGG | - | chr4_4:74395964-74395983 | Msa0702670:intron | 25.0% |
| ! | GTGATATAATAAATTCGTGA+AGG | + | chr4_4:74396138-74396157 | None:intergenic | 25.0% |
| ! | TAATAACAGTTCTCATTGAA+AGG | - | chr4_4:74396283-74396302 | Msa0702670:intron | 25.0% |
| ! | CTTTACAAAAAGAAAGAAAG+TGG | + | chr4_4:74396336-74396355 | None:intergenic | 25.0% |
| !! | AAAAAAATTGTGGCTTTTCT+TGG | - | chr4_4:74396441-74396460 | Msa0702670:intron | 25.0% |
| ! | TCAATCAAGCAACTAAAAAA+GGG | + | chr4_4:74396567-74396586 | None:intergenic | 25.0% |
| ! | TTCAATCAAGCAACTAAAAA+AGG | + | chr4_4:74396568-74396587 | None:intergenic | 25.0% |
| !! | GATTTATATTTATTGGCTGT+TGG | - | chr4_4:74396786-74396805 | Msa0702670:intron | 25.0% |
| ! | TGAATGAAATATCATCAAAG+TGG | + | chr4_4:74397098-74397117 | None:intergenic | 25.0% |
| !! | TTGATGATATTTCATTCAAG+TGG | - | chr4_4:74397100-74397119 | Msa0702670:intron | 25.0% |
| ! | TGTTATCCTAATTAAGCATA+AGG | - | chr4_4:74397191-74397210 | Msa0702670:intron | 25.0% |
| ! | GTTATCCTAATTAAGCATAA+GGG | - | chr4_4:74397192-74397211 | Msa0702670:intron | 25.0% |
| ! | ACAAAAAATGACGATTATGT+GGG | + | chr4_4:74397544-74397563 | None:intergenic | 25.0% |
| !!! | ACATAATCGTCATTTTTTGT+CGG | - | chr4_4:74397544-74397563 | Msa0702670:intron | 25.0% |
| !!! | ATTTTTTGTCGGAAATACAT+GGG | - | chr4_4:74397555-74397574 | Msa0702670:intron | 25.0% |
| ! | TAATGAAATTAGACTGAATC+AGG | - | chr4_4:74397672-74397691 | Msa0702670:intron | 25.0% |
| !! | GATGATTTATTCTTTTCATC+AGG | - | chr4_4:74397764-74397783 | Msa0702670:intron | 25.0% |
| ! | AAATAAAGGAAACAGAATGA+GGG | + | chr4_4:74397883-74397902 | None:intergenic | 25.0% |
| ! | ACGGAATGAAAATCAAATAA+AGG | + | chr4_4:74397897-74397916 | None:intergenic | 25.0% |
| !!! | TGTTGATTTGATCTATAATG+TGG | - | chr4_4:74397954-74397973 | Msa0702670:CDS | 25.0% |
| ! | ATAACATACAAATCAATGAG+TGG | + | chr4_4:74398044-74398063 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTTTTTTGGAGTG+AGG | - | chr4_4:74398184-74398203 | Msa0702670:CDS | 25.0% |
| !!! | TAATGTGCAAGATATTTTTG+CGG | - | chr4_4:74398212-74398231 | Msa0702670:CDS | 25.0% |
| !!! | GTTTTAAAAACACATCAAGA+AGG | + | chr4_4:74398263-74398282 | None:intergenic | 25.0% |
| ! | CTAAAAGAGATAGCAAATTA+AGG | + | chr4_4:74398313-74398332 | None:intergenic | 25.0% |
| !! | GTTAATTTTTCTGATGTCTT+CGG | - | chr4_4:74398347-74398366 | Msa0702670:intron | 25.0% |
| !! | TGCATATCCTTAATTTGATT+GGG | + | chr4_4:74398994-74399013 | None:intergenic | 25.0% |
| !! | ATGCATATCCTTAATTTGAT+TGG | + | chr4_4:74398995-74399014 | None:intergenic | 25.0% |
| !!! | ATTTTAATTTTGCCTTCCAT+AGG | - | chr4_4:74399041-74399060 | Msa0702670:intron | 25.0% |
| ! | AAAAGATGCAACTTATTATC+TGG | - | chr4_4:74399477-74399496 | Msa0702670:intron | 25.0% |
| ! | ATGATTGATGTTATGAAAGT+TGG | + | chr4_4:74399526-74399545 | None:intergenic | 25.0% |
| ! | TTTCATAACATCAATCATCT+TGG | - | chr4_4:74399528-74399547 | Msa0702670:intron | 25.0% |
| ! | ATATGATACAAAGAGTAATC+TGG | + | chr4_4:74400306-74400325 | None:intergenic | 25.0% |
| ATGTGTGAAATTTGATGGAA+AGG | + | chr4_4:74393543-74393562 | None:intergenic | 30.0% | |
| TTTGCATGTGTGAAATTTGA+TGG | + | chr4_4:74393548-74393567 | None:intergenic | 30.0% | |
| ACCATAAATCAGAATTCAGT+GGG | + | chr4_4:74393631-74393650 | None:intergenic | 30.0% | |
| !!! | TATGGTGAGTTTTGTTTGAT+TGG | - | chr4_4:74393645-74393664 | Msa0702670:three_prime_UTR | 30.0% |
| !!! | ATGGTGAGTTTTGTTTGATT+GGG | - | chr4_4:74393646-74393665 | Msa0702670:three_prime_UTR | 30.0% |
| ACACACTCAATTCTGATTTA+TGG | - | chr4_4:74393690-74393709 | Msa0702670:three_prime_UTR | 30.0% | |
| !!! | TCTTGTGATTTTGATTGTGT+AGG | - | chr4_4:74393800-74393819 | Msa0702670:three_prime_UTR | 30.0% |
| !! | ATTAAAATCTAGAAGTGTCC+TGG | + | chr4_4:74393963-74393982 | None:intergenic | 30.0% |
| GGTTTATCTATACAGTAACA+TGG | - | chr4_4:74394242-74394261 | Msa0702670:intron | 30.0% | |
| GGTTTAAATTAGTGATTTCC+TGG | - | chr4_4:74394491-74394510 | Msa0702670:intron | 30.0% | |
| ACATCTTAAAAGCCATTTAC+AGG | - | chr4_4:74394684-74394703 | Msa0702670:intron | 30.0% | |
| ! | GCTCAAACTCTTATAGTTTT+TGG | + | chr4_4:74394737-74394756 | None:intergenic | 30.0% |
| ACAAAAAATTCAACGTGAGA+TGG | + | chr4_4:74394843-74394862 | None:intergenic | 30.0% | |
| GGTGGTTTAGTTAAGTATTA+GGG | - | chr4_4:74394926-74394945 | Msa0702670:intron | 30.0% | |
| GAAAATGTTTAGTGAATCCA+CGG | - | chr4_4:74394965-74394984 | Msa0702670:intron | 30.0% | |
| AAAATGTTTAGTGAATCCAC+GGG | - | chr4_4:74394966-74394985 | Msa0702670:intron | 30.0% | |
| AGCAGAAAAATGTACAACAA+AGG | + | chr4_4:74394997-74395016 | None:intergenic | 30.0% | |
| ! | TGTTGTACATTTTTCTGCTA+TGG | - | chr4_4:74394998-74395017 | Msa0702670:intron | 30.0% |
| GAATAAGAAAAGGAATATGG+GGG | - | chr4_4:74395089-74395108 | Msa0702670:intron | 30.0% | |
| CTCATCTTAGCATTTATATC+TGG | + | chr4_4:74395807-74395826 | None:intergenic | 30.0% | |
| TGAGATCAATTCTTATTGAC+TGG | - | chr4_4:74395823-74395842 | Msa0702670:intron | 30.0% | |
| GATCCAAATCCATCTAATAT+GGG | + | chr4_4:74395915-74395934 | None:intergenic | 30.0% | |
| AGATCCAAATCCATCTAATA+TGG | + | chr4_4:74395916-74395935 | None:intergenic | 30.0% | |
| AAATTTCATAAGCAAAGAGC+TGG | + | chr4_4:74396094-74396113 | None:intergenic | 30.0% | |
| ! | TCAGGTCTAAGTTATACTTT+TGG | - | chr4_4:74396162-74396181 | Msa0702670:intron | 30.0% |
| !! | CTCAAAAAAAGTTGATGTCA+TGG | + | chr4_4:74396263-74396282 | None:intergenic | 30.0% |
| CAATCAAGCAACTAAAAAAG+GGG | + | chr4_4:74396566-74396585 | None:intergenic | 30.0% | |
| TAGTTGCTTGATTGAAGTAT+TGG | - | chr4_4:74396572-74396591 | Msa0702670:intron | 30.0% | |
| TGTTAAAATATGTTCGTGTC+AGG | - | chr4_4:74396885-74396904 | Msa0702670:intron | 30.0% | |
| GTTAAAATATGTTCGTGTCA+GGG | - | chr4_4:74396886-74396905 | Msa0702670:intron | 30.0% | |
| ATCTGCAGGTAAACAATTAT+AGG | - | chr4_4:74396968-74396987 | Msa0702670:intron | 30.0% | |
| TATTCTATCTGGCTATTCTA+AGG | + | chr4_4:74397520-74397539 | None:intergenic | 30.0% | |
| GACAAAAAATGACGATTATG+TGG | + | chr4_4:74397545-74397564 | None:intergenic | 30.0% | |
| !!! | CATTTTTTGTCGGAAATACA+TGG | - | chr4_4:74397554-74397573 | Msa0702670:intron | 30.0% |
| TAGAATTCAGAAGCCAAAAA+AGG | - | chr4_4:74397584-74397603 | Msa0702670:intron | 30.0% | |
| !!! | TCCAAAACAACATCCTTTTT+TGG | + | chr4_4:74397600-74397619 | None:intergenic | 30.0% |
| AAGATACTTACAATCTACCA+AGG | + | chr4_4:74397849-74397868 | None:intergenic | 30.0% | |
| AATAAAGGAAACAGAATGAG+GGG | + | chr4_4:74397882-74397901 | None:intergenic | 30.0% | |
| CAAATAAAGGAAACAGAATG+AGG | + | chr4_4:74397884-74397903 | None:intergenic | 30.0% | |
| TATAATGTGGTACTTATTGC+AGG | - | chr4_4:74397967-74397986 | Msa0702670:intron | 30.0% | |
| GAATAAATATGTTATGCTGC+AGG | + | chr4_4:74397995-74398014 | None:intergenic | 30.0% | |
| ATTCAGGAAAATCTGTTTAG+TGG | - | chr4_4:74398125-74398144 | Msa0702670:CDS | 30.0% | |
| TTTGCAGTAAGATGAATATG+TGG | - | chr4_4:74398710-74398729 | Msa0702670:intron | 30.0% | |
| TTGCAGTAAGATGAATATGT+GGG | - | chr4_4:74398711-74398730 | Msa0702670:intron | 30.0% | |
| ! | GCATATCCTTAATTTGATTG+GGG | + | chr4_4:74398993-74399012 | None:intergenic | 30.0% |
| ATCATACAGATTTAACTCCT+TGG | - | chr4_4:74399264-74399283 | Msa0702670:intron | 30.0% | |
| ATTCGGACACATTTATGATT+TGG | + | chr4_4:74399376-74399395 | None:intergenic | 30.0% | |
| TTGCGTATTAGCAATAATAG+AGG | - | chr4_4:74399592-74399611 | Msa0702670:five_prime_UTR | 30.0% | |
| ! | CTTTTGTCAAAATTCTACTG+TGG | - | chr4_4:74399658-74399677 | Msa0702670:intron | 30.0% |
| GATAATGATTCGAAACAGTT+TGG | - | chr4_4:74399867-74399886 | Msa0702670:five_prime_UTR | 30.0% | |
| ! | TTTAATTTCTTTGCCCAACT+TGG | + | chr4_4:74399982-74400001 | None:intergenic | 30.0% |
| !!! | TTTCATCCTTGGGTATTTTT+TGG | - | chr4_4:74400015-74400034 | Msa0702670:intron | 30.0% |
| TATCTTCCAAAAAATACCCA+AGG | + | chr4_4:74400024-74400043 | None:intergenic | 30.0% | |
| AATAACTTCGCAAGATACAA+TGG | + | chr4_4:74400049-74400068 | None:intergenic | 30.0% | |
| TTGTTATATCCTTCGCATAA+TGG | - | chr4_4:74400085-74400104 | Msa0702670:intron | 30.0% | |
| ! | GTTTTGTAGTGAGAGAAAGT+TGG | + | chr4_4:74393434-74393453 | None:intergenic | 35.0% |
| ACCCACTGAATTCTGATTTA+TGG | - | chr4_4:74393627-74393646 | Msa0702670:three_prime_UTR | 35.0% | |
| CACCATAAATCAGAATTCAG+TGG | + | chr4_4:74393632-74393651 | None:intergenic | 35.0% | |
| TTGATTGTGTAGGTATGAAG+AGG | - | chr4_4:74393810-74393829 | Msa0702670:three_prime_UTR | 35.0% | |
| TGATTGTGTAGGTATGAAGA+GGG | - | chr4_4:74393811-74393830 | Msa0702670:three_prime_UTR | 35.0% | |
| TGCACAGTGAAAAAGAAAAG+AGG | - | chr4_4:74394117-74394136 | Msa0702670:intron | 35.0% | |
| ! | TGTTATGACCACTTGCATTT+TGG | - | chr4_4:74394189-74394208 | Msa0702670:intron | 35.0% |
| AAGTTAGTCCAAAATGCAAG+TGG | + | chr4_4:74394200-74394219 | None:intergenic | 35.0% | |
| ! | TGCATGACTTTTGTATCTAC+TGG | - | chr4_4:74394221-74394240 | Msa0702670:intron | 35.0% |
| !! | ATAAATTTTCAGGAGGAGAG+AGG | - | chr4_4:74394272-74394291 | Msa0702670:intron | 35.0% |
| GCTAGCAGAATCATAATTGA+AGG | - | chr4_4:74394331-74394350 | Msa0702670:intron | 35.0% | |
| !! | TTTTTATTTGTGGGCTGAAC+AGG | - | chr4_4:74394441-74394460 | Msa0702670:intron | 35.0% |
| ! | GTTTTATGTGTATGTTGGTC+AGG | - | chr4_4:74394470-74394489 | Msa0702670:intron | 35.0% |
| AACTTATCATCAACAAACCC+AGG | + | chr4_4:74394512-74394531 | None:intergenic | 35.0% | |
| ! | TTTGAAATGAAATCTGAGGG+TGG | - | chr4_4:74394908-74394927 | Msa0702670:intron | 35.0% |
| GGGTGGTTTAGTTAAGTATT+AGG | - | chr4_4:74394925-74394944 | Msa0702670:intron | 35.0% | |
| CAAATGTACCTTGTTCTTCT+CGG | + | chr4_4:74395346-74395365 | None:intergenic | 35.0% | |
| ! | GGAAACACAACCTTTGAAAA+TGG | + | chr4_4:74395397-74395416 | None:intergenic | 35.0% |
| ATGTTCTCAACCAAATCCTT+GGG | + | chr4_4:74395576-74395595 | None:intergenic | 35.0% | |
| AATGTTCTCAACCAAATCCT+TGG | + | chr4_4:74395577-74395596 | None:intergenic | 35.0% | |
| TTGACTTTGATGAATGACAC+AGG | - | chr4_4:74395746-74395765 | Msa0702670:intron | 35.0% | |
| ! | TTGCCCATATTAGATGGATT+TGG | - | chr4_4:74395909-74395928 | Msa0702670:CDS | 35.0% |
| ATGCAGGCAATAACAATGAT+AGG | - | chr4_4:74395980-74395999 | Msa0702670:intron | 35.0% | |
| TGCAGGCAATAACAATGATA+GGG | - | chr4_4:74395981-74396000 | Msa0702670:intron | 35.0% | |
| ACAATGATAGGGAATGAAGA+AGG | - | chr4_4:74395992-74396011 | Msa0702670:intron | 35.0% | |
| CTGGATGACTCTATAAGTTA+TGG | + | chr4_4:74396075-74396094 | None:intergenic | 35.0% | |
| ! | AAAATTGTGGCTTTTCTTGG+TGG | - | chr4_4:74396444-74396463 | Msa0702670:intron | 35.0% |
| ! | AGGAAAGTTTTGCATTGTGT+TGG | - | chr4_4:74396485-74396504 | Msa0702670:intron | 35.0% |
| TGGTCTCCTATATTTCTTCT+TGG | - | chr4_4:74396806-74396825 | Msa0702670:intron | 35.0% | |
| GGTTCACCAAGAAGAAATAT+AGG | + | chr4_4:74396815-74396834 | None:intergenic | 35.0% | |
| GGTAATATGAAGGAATGACA+TGG | + | chr4_4:74396941-74396960 | None:intergenic | 35.0% | |
| GATGACATTGGGTAATATGA+AGG | + | chr4_4:74396951-74396970 | None:intergenic | 35.0% | |
| TGACTAAAACTACCTCTCAT+CGG | - | chr4_4:74397061-74397080 | Msa0702670:CDS | 35.0% | |
| CACATCCCTTATGCTTAATT+AGG | + | chr4_4:74397200-74397219 | None:intergenic | 35.0% | |
| ! | ACACACACTATTGTTCTAGA+TGG | - | chr4_4:74397372-74397391 | Msa0702670:intron | 35.0% |
| TTCAAGTGATAGGATTCTGA+AGG | - | chr4_4:74397463-74397482 | Msa0702670:intron | 35.0% | |
| ! | ATTATGTGGGCTATTCTATC+TGG | + | chr4_4:74397531-74397550 | None:intergenic | 35.0% |
| !! | GCCAAAAAAGGATGTTGTTT+TGG | - | chr4_4:74397596-74397615 | Msa0702670:intron | 35.0% |
| ! | AAAGTGAGGCATCAAAGTTT+AGG | - | chr4_4:74397697-74397716 | Msa0702670:intron | 35.0% |
| ! | CTTAGTCTTTCAACTCACAT+AGG | - | chr4_4:74397742-74397761 | Msa0702670:intron | 35.0% |
| ATCAAGGAACCAAATGAACT+TGG | + | chr4_4:74397823-74397842 | None:intergenic | 35.0% | |
| ! | TTTGGTTCCTTGATAAACCT+TGG | - | chr4_4:74397829-74397848 | Msa0702670:CDS | 35.0% |
| CAATCTACCAAGGTTTATCA+AGG | + | chr4_4:74397839-74397858 | None:intergenic | 35.0% | |
| ! | TTTTTCTTCCAGCAACATTC+AGG | - | chr4_4:74398109-74398128 | Msa0702670:CDS | 35.0% |
| ! | TGGAAATGAGTCGGTATTTT+GGG | + | chr4_4:74398285-74398304 | None:intergenic | 35.0% |
| GATAGCAAATTAAGGAATCC+TGG | + | chr4_4:74398305-74398324 | None:intergenic | 35.0% | |
| AACACCAACGGAAATGAAAA+AGG | - | chr4_4:74398548-74398567 | Msa0702670:CDS | 35.0% | |
| ACACCAACGGAAATGAAAAA+GGG | - | chr4_4:74398549-74398568 | Msa0702670:CDS | 35.0% | |
| !! | TTTCCCTTTTTCATTTCCGT+TGG | + | chr4_4:74398555-74398574 | None:intergenic | 35.0% |
| TGCAGTAAGATGAATATGTG+GGG | - | chr4_4:74398712-74398731 | Msa0702670:intron | 35.0% | |
| ATAATGCACAATATGTGCAG+GGG | + | chr4_4:74398759-74398778 | None:intergenic | 35.0% | |
| GATAATGCACAATATGTGCA+GGG | + | chr4_4:74398760-74398779 | None:intergenic | 35.0% | |
| GTATGACCCCAATCAAATTA+AGG | - | chr4_4:74398984-74399003 | Msa0702670:intron | 35.0% | |
| GAGTAAGATTACATTCAGCA+AGG | + | chr4_4:74399070-74399089 | None:intergenic | 35.0% | |
| AGATATCTGCATTATGTGTG+TGG | + | chr4_4:74399101-74399120 | None:intergenic | 35.0% | |
| TTATCTCCTCATGTTGTGAA+TGG | - | chr4_4:74399142-74399161 | Msa0702670:intron | 35.0% | |
| AAGTGAATAGTTCACTTCCA+AGG | + | chr4_4:74399284-74399303 | None:intergenic | 35.0% | |
| TGGAAGTGAACTATTCACTT+TGG | - | chr4_4:74399284-74399303 | Msa0702670:intron | 35.0% | |
| AAGTGAACTATTCACTTTGG+AGG | - | chr4_4:74399287-74399306 | Msa0702670:intron | 35.0% | |
| AGTGAACTATTCACTTTGGA+GGG | - | chr4_4:74399288-74399307 | Msa0702670:intron | 35.0% | |
| ATGAGACCATGACTGATATT+CGG | + | chr4_4:74399393-74399412 | None:intergenic | 35.0% | |
| ! | AGTATCGAACATATAGGTGT+AGG | + | chr4_4:74399715-74399734 | None:intergenic | 35.0% |
| ! | AGAAAGATTGCTGTTGCAAT+GGG | + | chr4_4:74399836-74399855 | None:intergenic | 35.0% |
| ! | AAGAAAGATTGCTGTTGCAA+TGG | + | chr4_4:74399837-74399856 | None:intergenic | 35.0% |
| AAACTGTGTCAGGTTACAAT+CGG | + | chr4_4:74399952-74399971 | None:intergenic | 35.0% | |
| AAAATACCCAAGGATGAAAC+TGG | + | chr4_4:74400014-74400033 | None:intergenic | 35.0% | |
| TTGCGAAGTTATTTGATCTG+CGG | - | chr4_4:74400056-74400075 | Msa0702670:intron | 35.0% | |
| AATCAAAAGCCATTATGCGA+AGG | + | chr4_4:74400097-74400116 | None:intergenic | 35.0% | |
| !!! | TTTTGATTTTGCATCAGCCA+TGG | - | chr4_4:74400109-74400128 | Msa0702670:five_prime_UTR | 35.0% |
| TTGTAGTGAGAGAAAGTTGG+TGG | + | chr4_4:74393431-74393450 | None:intergenic | 40.0% | |
| TCCTTCTCTCTTCTCAAACA+CGG | - | chr4_4:74393500-74393519 | Msa0702670:three_prime_UTR | 40.0% | |
| CAGATTTCTGAGTTGCAAGT+AGG | - | chr4_4:74394153-74394172 | Msa0702670:intron | 40.0% | |
| ATACTATGCATATGTGGCAG+AGG | - | chr4_4:74394609-74394628 | Msa0702670:exon | 40.0% | |
| ! | AACACCAAAGCGTTTGATGA+GGG | - | chr4_4:74394633-74394652 | Msa0702670:CDS | 40.0% |
| AAAAGGAATATGGGGGTTGA+AGG | - | chr4_4:74395096-74395115 | Msa0702670:intron | 40.0% | |
| GGTTGAAGGAAGAAACAGAA+AGG | - | chr4_4:74395110-74395129 | Msa0702670:intron | 40.0% | |
| CCAAAATCTTGTGATCAACC+CGG | - | chr4_4:74395146-74395165 | Msa0702670:intron | 40.0% | |
| TGTTCGTGTGCATGATTACA+TGG | - | chr4_4:74395773-74395792 | Msa0702670:intron | 40.0% | |
| ACTGGTTGATTGAAGTGTAC+AGG | - | chr4_4:74395841-74395860 | Msa0702670:intron | 40.0% | |
| CAGGAAATTTGAACTCATGC+TGG | - | chr4_4:74395860-74395879 | Msa0702670:intron | 40.0% | |
| GTTTGCATCGCTACGTATTA+GGG | - | chr4_4:74396049-74396068 | Msa0702670:intron | 40.0% | |
| AAACGATTACCTCTCTGTTG+TGG | - | chr4_4:74396210-74396229 | Msa0702670:intron | 40.0% | |
| AACGATTACCTCTCTGTTGT+GGG | - | chr4_4:74396211-74396230 | Msa0702670:intron | 40.0% | |
| GTGTTGGAACTTGAGTTTCA+AGG | - | chr4_4:74396501-74396520 | Msa0702670:intron | 40.0% | |
| TCAAGCAACTAAAAAAGGGG+TGG | + | chr4_4:74396563-74396582 | None:intergenic | 40.0% | |
| ! | GGTGTACCAATTTTCAGAGT+TGG | - | chr4_4:74396629-74396648 | Msa0702670:intron | 40.0% |
| ! | TACAGGCCAACTCTGAAAAT+TGG | + | chr4_4:74396638-74396657 | None:intergenic | 40.0% |
| ! | ACCAGTAAGAAGAGGAGTAT+CGG | + | chr4_4:74396695-74396714 | None:intergenic | 40.0% |
| ATCCTTCACTCAGACTACTA+AGG | + | chr4_4:74396769-74396788 | None:intergenic | 40.0% | |
| ACACAACCAGAACTATCACT+TGG | + | chr4_4:74396836-74396855 | None:intergenic | 40.0% | |
| ! | TTCTGGTTGTGTCTTTCACT+TGG | - | chr4_4:74396844-74396863 | Msa0702670:intron | 40.0% |
| GGATCATGAAACTCTCATTC+TGG | + | chr4_4:74396920-74396939 | None:intergenic | 40.0% | |
| TATTACCCAATGTCATCTGC+AGG | - | chr4_4:74396954-74396973 | Msa0702670:intron | 40.0% | |
| GTTTACCTGCAGATGACATT+GGG | + | chr4_4:74396962-74396981 | None:intergenic | 40.0% | |
| TGTTTACCTGCAGATGACAT+TGG | + | chr4_4:74396963-74396982 | None:intergenic | 40.0% | |
| GAATTACTAAGACCGATGAG+AGG | + | chr4_4:74397076-74397095 | None:intergenic | 40.0% | |
| ! | TTGTTCTAGATGGTTACACC+TGG | - | chr4_4:74397382-74397401 | Msa0702670:intron | 40.0% |
| TTTCGTTGTGTCAACGTTGT+TGG | - | chr4_4:74397435-74397454 | Msa0702670:intron | 40.0% | |
| ! | GTTGGCTTCTTTCAAGTGAT+AGG | - | chr4_4:74397453-74397472 | Msa0702670:intron | 40.0% |
| AAAAGAAATGCTCTGTCAGC+TGG | - | chr4_4:74397624-74397643 | Msa0702670:intron | 40.0% | |
| GACTGAATCAGGAAAAAGTG+AGG | - | chr4_4:74397683-74397702 | Msa0702670:intron | 40.0% | |
| ! | CAGATTTTCCTGAATGTTGC+TGG | + | chr4_4:74398120-74398139 | None:intergenic | 40.0% |
| TATATGCTATATCTGCGCCA+AGG | + | chr4_4:74398238-74398257 | None:intergenic | 40.0% | |
| ! | CTGGAAATGAGTCGGTATTT+TGG | + | chr4_4:74398286-74398305 | None:intergenic | 40.0% |
| !! | CAAAATACCGACTCATTTCC+AGG | - | chr4_4:74398284-74398303 | Msa0702670:intron | 40.0% |
| AAGGAATCCTGGAAATGAGT+CGG | + | chr4_4:74398294-74398313 | None:intergenic | 40.0% | |
| GGATAATGCACAATATGTGC+AGG | + | chr4_4:74398761-74398780 | None:intergenic | 40.0% | |
| GAGCTTAGCTCATTTGGTAT+GGG | + | chr4_4:74398782-74398801 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCATTTGGTA+TGG | + | chr4_4:74398783-74398802 | None:intergenic | 40.0% | |
| TACCAAATGAGCTAAGCTCA+TGG | - | chr4_4:74398783-74398802 | Msa0702670:intron | 40.0% | |
| ACCAAATGAGCTAAGCTCAT+GGG | - | chr4_4:74398784-74398803 | Msa0702670:intron | 40.0% | |
| ACATTCAGCAAGGAAACCTA+TGG | + | chr4_4:74399060-74399079 | None:intergenic | 40.0% | |
| TCACATCCATTCACAACATG+AGG | + | chr4_4:74399151-74399170 | None:intergenic | 40.0% | |
| ! | GTTTGATAGTTGAACTGCCA+TGG | - | chr4_4:74399200-74399219 | Msa0702670:intron | 40.0% |
| CTTATCCAAGGATGTAAGTG+AGG | - | chr4_4:74399235-74399254 | Msa0702670:intron | 40.0% | |
| AAGATCCTCACTTACATCCT+TGG | + | chr4_4:74399243-74399262 | None:intergenic | 40.0% | |
| ATGTGTCCGAATATCAGTCA+TGG | - | chr4_4:74399384-74399403 | Msa0702670:intron | 40.0% | |
| GAATATCAGTCATGGTCTCA+TGG | - | chr4_4:74399392-74399411 | Msa0702670:intron | 40.0% | |
| CGAACATATAGGTGTAGGAT+AGG | + | chr4_4:74399710-74399729 | None:intergenic | 40.0% | |
| ! | TTGCTGTTGCAATGGGAATA+AGG | + | chr4_4:74399829-74399848 | None:intergenic | 40.0% |
| TTCATCAGAAGAACGCTTTG+CGG | + | chr4_4:74399904-74399923 | None:intergenic | 40.0% | |
| AATTTCTTTGCCCAACTTGG+CGG | + | chr4_4:74399979-74399998 | None:intergenic | 40.0% | |
| AAGTGACCAGTTTCATCCTT+GGG | - | chr4_4:74400005-74400024 | Msa0702670:intron | 40.0% | |
| GAAAGGAGAGAAGAGAAGTG+AGG | + | chr4_4:74393526-74393545 | None:intergenic | 45.0% | |
| GCAACTCAGAAATCTGTCAC+TGG | + | chr4_4:74394149-74394168 | None:intergenic | 45.0% | |
| ACTAGAGTGGGAATTGGCAA+GGG | - | chr4_4:74394297-74394316 | Msa0702670:intron | 45.0% | |
| ! | CAACACCAAAGCGTTTGATG+AGG | - | chr4_4:74394632-74394651 | Msa0702670:CDS | 45.0% |
| ATCACCCTCATCAAACGCTT+TGG | + | chr4_4:74394640-74394659 | None:intergenic | 45.0% | |
| ! | AAAGCGTTTGATGAGGGTGA+TGG | - | chr4_4:74394639-74394658 | Msa0702670:CDS | 45.0% |
| AGATGTTCCAAAGTGAGTCC+TGG | + | chr4_4:74394670-74394689 | None:intergenic | 45.0% | |
| ATGTTTAGTGAATCCACGGG+TGG | - | chr4_4:74394969-74394988 | Msa0702670:intron | 45.0% | |
| !!! | CCGGGTTGATCACAAGATTT+TGG | + | chr4_4:74395149-74395168 | None:intergenic | 45.0% |
| ATGTCACCAAATGCCTCACA+AGG | - | chr4_4:74395190-74395209 | Msa0702670:intron | 45.0% | |
| TATGGAATCAGCACCTTGTG+AGG | + | chr4_4:74395206-74395225 | None:intergenic | 45.0% | |
| TACCTTGTTCTTCTCGGTTG+CGG | + | chr4_4:74395340-74395359 | None:intergenic | 45.0% | |
| AGAACATTGTTCCTGCAGCA+AGG | - | chr4_4:74395469-74395488 | Msa0702670:intron | 45.0% | |
| GAACATTGTTCCTGCAGCAA+GGG | - | chr4_4:74395470-74395489 | Msa0702670:intron | 45.0% | |
| TAGAGTTGTGCCCAAGGATT+TGG | - | chr4_4:74395563-74395582 | Msa0702670:intron | 45.0% | |
| AGGCATTCGAGGTTACTTGA+AGG | - | chr4_4:74396012-74396031 | Msa0702670:intron | 45.0% | |
| GGCATTCGAGGTTACTTGAA+GGG | - | chr4_4:74396013-74396032 | Msa0702670:intron | 45.0% | |
| CTTGAAGGGTAACGTACCAT+AGG | - | chr4_4:74396027-74396046 | Msa0702670:intron | 45.0% | |
| TACGTAGCGATGCAAACCTA+TGG | + | chr4_4:74396046-74396065 | None:intergenic | 45.0% | |
| GGTTTGCATCGCTACGTATT+AGG | - | chr4_4:74396048-74396067 | Msa0702670:intron | 45.0% | |
| TTCCTCTCTTACCATGCTCA+AGG | + | chr4_4:74396470-74396489 | None:intergenic | 45.0% | |
| AAAGAAGTTCACCATGCCTC+AGG | - | chr4_4:74396530-74396549 | Msa0702670:intron | 45.0% | |
| TTCACCATGCCTCAGGTTTA+TGG | - | chr4_4:74396537-74396556 | Msa0702670:intron | 45.0% | |
| !! | AGTTTTGATGCAACAGGCCT+CGG | + | chr4_4:74396667-74396686 | None:intergenic | 45.0% |
| !! | GCTGCAAGTTTTGATGCAAC+AGG | + | chr4_4:74396673-74396692 | None:intergenic | 45.0% |
| TACTCCTCTTCTTACTGGTC+AGG | - | chr4_4:74396696-74396715 | Msa0702670:intron | 45.0% | |
| CTTACCTGACCAGTAAGAAG+AGG | + | chr4_4:74396703-74396722 | None:intergenic | 45.0% | |
| TAAGGCAATGCATGCAAGCT+AGG | + | chr4_4:74396751-74396770 | None:intergenic | 45.0% | |
| TGCCTTAGTAGTCTGAGTGA+AGG | - | chr4_4:74396764-74396783 | Msa0702670:intron | 45.0% | |
| GGTGAACCAAGTGATAGTTC+TGG | - | chr4_4:74396827-74396846 | Msa0702670:intron | 45.0% | |
| TGAGCACACAGATTTGACAG+AGG | + | chr4_4:74397126-74397145 | None:intergenic | 45.0% | |
| TACACCTGGTAGCACAATTG+TGG | - | chr4_4:74397396-74397415 | Msa0702670:intron | 45.0% | |
| TGAACCACAATTGTGCTACC+AGG | + | chr4_4:74397403-74397422 | None:intergenic | 45.0% | |
| GGAGATCTGCCAAGTTCATT+TGG | - | chr4_4:74397811-74397830 | Msa0702670:CDS | 45.0% | |
| !! | GCAAGATATTTTTGCGGCCT+TGG | - | chr4_4:74398218-74398237 | Msa0702670:CDS | 45.0% |
| TGTGCAATCACTGCAACAAC+AGG | - | chr4_4:74398427-74398446 | Msa0702670:intron | 45.0% | |
| ATCACTGCAACAACAGGTTG+AGG | - | chr4_4:74398433-74398452 | Msa0702670:intron | 45.0% | |
| GTGCACATGCTTAACACCAA+CGG | - | chr4_4:74398536-74398555 | Msa0702670:intron | 45.0% | |
| ! | AGATGAATATGTGGGGTGTC+CGG | - | chr4_4:74398719-74398738 | Msa0702670:intron | 45.0% |
| CCAAATGAGCTAAGCTCATG+GGG | - | chr4_4:74398785-74398804 | Msa0702670:intron | 45.0% | |
| ATGAGAATGTGAATCGCCCT+AGG | + | chr4_4:74398872-74398891 | None:intergenic | 45.0% | |
| TCAGCAAGGAAACCTATGGA+AGG | + | chr4_4:74399056-74399075 | None:intergenic | 45.0% | |
| ! | TGGATCTTCTCATCGACTGT+TGG | - | chr4_4:74399412-74399431 | Msa0702670:five_prime_UTR | 45.0% |
| TCATCAGAAGAACGCTTTGC+GGG | + | chr4_4:74399903-74399922 | None:intergenic | 45.0% | |
| ! | ACAGTTTTCTTCCGCCAAGT+TGG | - | chr4_4:74399965-74399984 | Msa0702670:intron | 45.0% |
| ! | CAGTTTTCTTCCGCCAAGTT+GGG | - | chr4_4:74399966-74399985 | Msa0702670:intron | 45.0% |
| GAAGTGACCAGTTTCATCCT+TGG | - | chr4_4:74400004-74400023 | Msa0702670:intron | 45.0% | |
| !! | AAAAAAAAAACAAAATATAA+TGG | + | chr4_4:74398668-74398687 | None:intergenic | 5.0% |
| GCCGTGTTTGAGAAGAGAGA+AGG | + | chr4_4:74393504-74393523 | None:intergenic | 50.0% | |
| TGTGTAGGTATGAAGAGGGC+TGG | - | chr4_4:74393815-74393834 | Msa0702670:three_prime_UTR | 50.0% | |
| AGGAGAGAGGACACTAGAGT+GGG | - | chr4_4:74394285-74394304 | Msa0702670:intron | 50.0% | |
| GAGGACACTAGAGTGGGAAT+TGG | - | chr4_4:74394291-74394310 | Msa0702670:intron | 50.0% | |
| CACTAGAGTGGGAATTGGCA+AGG | - | chr4_4:74394296-74394315 | Msa0702670:intron | 50.0% | |
| !! | ATGAGGGTGATGGAGATTCC+AGG | - | chr4_4:74394649-74394668 | Msa0702670:CDS | 50.0% |
| GGAGATTCCAGGACTCACTT+TGG | - | chr4_4:74394660-74394679 | Msa0702670:CDS | 50.0% | |
| !! | TACAACAAAGGTACCACCCG+TGG | + | chr4_4:74394985-74395004 | None:intergenic | 50.0% |
| CATTAGCACCAAGATCTGCC+GGG | + | chr4_4:74395167-74395186 | None:intergenic | 50.0% | |
| GCATTAGCACCAAGATCTGC+CGG | + | chr4_4:74395168-74395187 | None:intergenic | 50.0% | |
| ! | TCAGCACCTTGTGAGGCATT+TGG | + | chr4_4:74395199-74395218 | None:intergenic | 50.0% |
| TTGTTGCAGGGCTCAGTTAG+AGG | - | chr4_4:74395302-74395321 | Msa0702670:CDS | 50.0% | |
| TGCTTGTAGAGTTGTGCCCA+AGG | - | chr4_4:74395557-74395576 | Msa0702670:intron | 50.0% | |
| !! | GGGAATGAAGAAGGCATTCG+AGG | - | chr4_4:74396001-74396020 | Msa0702670:intron | 50.0% |
| CAAGTCTTCCCACAACAGAG+AGG | + | chr4_4:74396222-74396241 | None:intergenic | 50.0% | |
| ! | TTTCTTGGTGGCCTTGAGCA+TGG | - | chr4_4:74396456-74396475 | Msa0702670:intron | 50.0% |
| GCCGATACTCCTCTTCTTAC+TGG | - | chr4_4:74396691-74396710 | Msa0702670:intron | 50.0% | |
| GGTTGTGTCTTTCACTTGGC+AGG | - | chr4_4:74396848-74396867 | Msa0702670:intron | 50.0% | |
| AGCTCAGTCAGGTATGTGAC+TGG | + | chr4_4:74398020-74398039 | None:intergenic | 50.0% | |
| CAATGAGTGGAAGCTCAGTC+AGG | + | chr4_4:74398031-74398050 | None:intergenic | 50.0% | |
| GCATGTGCACAGTGCAAAAC+AGG | + | chr4_4:74398526-74398545 | None:intergenic | 50.0% | |
| ! | GATGAATATGTGGGGTGTCC+GGG | - | chr4_4:74398720-74398739 | Msa0702670:intron | 50.0% |
| ! | ATGAATATGTGGGGTGTCCG+GGG | - | chr4_4:74398721-74398740 | Msa0702670:intron | 50.0% |
| CCCCATGAGCTTAGCTCATT+TGG | + | chr4_4:74398788-74398807 | None:intergenic | 50.0% | |
| TTCTCAACCCTCAACCTCCT+AGG | - | chr4_4:74398852-74398871 | Msa0702670:intron | 50.0% | |
| TCTCAACCCTCAACCTCCTA+GGG | - | chr4_4:74398853-74398872 | Msa0702670:intron | 50.0% | |
| AGAATGTGAATCGCCCTAGG+AGG | + | chr4_4:74398869-74398888 | None:intergenic | 50.0% | |
| TGGCGGAAGAAAACTGTGTC+AGG | + | chr4_4:74399962-74399981 | None:intergenic | 50.0% | |
| !!! | AGCCATGGCTGCTTTTGGTT+AGG | - | chr4_4:74400124-74400143 | Msa0702670:five_prime_UTR | 50.0% |
| CACCTAACCAAAAGCAGCCA+TGG | + | chr4_4:74400129-74400148 | None:intergenic | 50.0% | |
| GAGGAGAGAGGACACTAGAG+TGG | - | chr4_4:74394284-74394303 | Msa0702670:intron | 55.0% | |
| GTGATCAACCCGGCAGATCT+TGG | - | chr4_4:74395156-74395175 | Msa0702670:intron | 55.0% | |
| AGCCGCAACCGAGAAGAACA+AGG | - | chr4_4:74395335-74395354 | Msa0702670:CDS | 55.0% | |
| CATTGTTCCTGCAGCAAGGG+TGG | - | chr4_4:74395473-74395492 | Msa0702670:intron | 55.0% | |
| GGCCTTGAGCATGGTAAGAG+AGG | - | chr4_4:74396465-74396484 | Msa0702670:intron | 55.0% | |
| GTGGCCATAAACCTGAGGCA+TGG | + | chr4_4:74396544-74396563 | None:intergenic | 55.0% | |
| AAGGGGTGGCCATAAACCTG+AGG | + | chr4_4:74396549-74396568 | None:intergenic | 55.0% | |
| TGCACAATATGTGCAGGGGC+CGG | + | chr4_4:74398755-74398774 | None:intergenic | 55.0% | |
| GAATCGCCCTAGGAGGTTGA+GGG | + | chr4_4:74398862-74398881 | None:intergenic | 55.0% | |
| TGAATCGCCCTAGGAGGTTG+AGG | + | chr4_4:74398863-74398882 | None:intergenic | 55.0% | |
| TGAACTGCCATGGACCAGAG+CGG | - | chr4_4:74399210-74399229 | Msa0702670:intron | 55.0% | |
| ATAAGAGCCGCTCTGGTCCA+TGG | + | chr4_4:74399220-74399239 | None:intergenic | 55.0% | |
| ACCAGAGCGGCTCTTATCCA+AGG | - | chr4_4:74399223-74399242 | Msa0702670:intron | 55.0% | |
| TCCTTGGATAAGAGCCGCTC+TGG | + | chr4_4:74399227-74399246 | None:intergenic | 55.0% | |
| !! | GCATCAGCCATGGCTGCTTT+TGG | - | chr4_4:74400119-74400138 | Msa0702670:five_prime_UTR | 55.0% |
| GCATGTTCCACCCTTGCTGC+AGG | + | chr4_4:74395483-74395502 | None:intergenic | 60.0% | |
| ! | GTTGGCCTGTACGTACACCG+AGG | - | chr4_4:74396647-74396666 | Msa0702670:intron | 60.0% |
| ! | ACAGGCCTCGGTGTACGTAC+AGG | + | chr4_4:74396655-74396674 | None:intergenic | 60.0% |
| CACAATATGTGCAGGGGCCG+GGG | + | chr4_4:74398753-74398772 | None:intergenic | 60.0% | |
| GCACAATATGTGCAGGGGCC+GGG | + | chr4_4:74398754-74398773 | None:intergenic | 60.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr4_4:74398733-74398752 | Msa0702670:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr4_4:74398741-74398760 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 74393423 | 74400328 | 74393423 | ID=Msa0702670;Name=Msa0702670 |
| chr4_4 | mRNA | 74393423 | 74400328 | 74393423 | ID=Msa0702670-mRNA-1;Parent=Msa0702670;Name=Msa0702670-mRNA-1;_AED=0.24;_eAED=0.24;_QI=502|0.63|0.75|0.9|0.42|0.5|20|560|405 |
| chr4_4 | exon | 74393423 | 74393866 | 74393423 | ID=Msa0702670-mRNA-1:exon:23232;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74394504 | 74394688 | 74394504 | ID=Msa0702670-mRNA-1:exon:23231;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74395297 | 74395365 | 74395297 | ID=Msa0702670-mRNA-1:exon:23230;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74395693 | 74395762 | 74395693 | ID=Msa0702670-mRNA-1:exon:23229;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74395894 | 74395965 | 74395894 | ID=Msa0702670-mRNA-1:exon:23228;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74396114 | 74396169 | 74396114 | ID=Msa0702670-mRNA-1:exon:23227;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74397034 | 74397105 | 74397034 | ID=Msa0702670-mRNA-1:exon:23226;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74397200 | 74397328 | 74397200 | ID=Msa0702670-mRNA-1:exon:23225;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74397633 | 74397681 | 74397633 | ID=Msa0702670-mRNA-1:exon:23224;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74397808 | 74397983 | 74397808 | ID=Msa0702670-mRNA-1:exon:23223;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74398077 | 74398280 | 74398077 | ID=Msa0702670-mRNA-1:exon:23222;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74398395 | 74398440 | 74398395 | ID=Msa0702670-mRNA-1:exon:23221;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74398540 | 74398666 | 74398540 | ID=Msa0702670-mRNA-1:exon:23220;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74398940 | 74398961 | 74398940 | ID=Msa0702670-mRNA-1:exon:23219;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74399046 | 74399122 | 74399046 | ID=Msa0702670-mRNA-1:exon:23218;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74399399 | 74399467 | 74399399 | ID=Msa0702670-mRNA-1:exon:23217;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74399581 | 74399660 | 74399581 | ID=Msa0702670-mRNA-1:exon:23216;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74399746 | 74399787 | 74399746 | ID=Msa0702670-mRNA-1:exon:23215;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74399865 | 74399929 | 74399865 | ID=Msa0702670-mRNA-1:exon:23214;Parent=Msa0702670-mRNA-1 |
| chr4_4 | exon | 74400103 | 74400328 | 74400103 | ID=Msa0702670-mRNA-1:exon:23213;Parent=Msa0702670-mRNA-1 |
| chr4_4 | five_prime_UTR | 74400103 | 74400328 | 74400103 | ID=Msa0702670-mRNA-1:five_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | five_prime_UTR | 74399865 | 74399929 | 74399865 | ID=Msa0702670-mRNA-1:five_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | five_prime_UTR | 74399746 | 74399787 | 74399746 | ID=Msa0702670-mRNA-1:five_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | five_prime_UTR | 74399581 | 74399660 | 74399581 | ID=Msa0702670-mRNA-1:five_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | five_prime_UTR | 74399399 | 74399467 | 74399399 | ID=Msa0702670-mRNA-1:five_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | five_prime_UTR | 74399103 | 74399122 | 74399103 | ID=Msa0702670-mRNA-1:five_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74399046 | 74399102 | 74399046 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74398940 | 74398961 | 74398940 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74398540 | 74398666 | 74398540 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74398395 | 74398440 | 74398395 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74398077 | 74398280 | 74398077 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74397808 | 74397983 | 74397808 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74397633 | 74397681 | 74397633 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74397200 | 74397328 | 74397200 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74397034 | 74397105 | 74397034 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74396114 | 74396169 | 74396114 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74395894 | 74395965 | 74395894 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74395693 | 74395762 | 74395693 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74395297 | 74395365 | 74395297 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | CDS | 74394620 | 74394688 | 74394620 | ID=Msa0702670-mRNA-1:cds;Parent=Msa0702670-mRNA-1 |
| chr4_4 | three_prime_UTR | 74394504 | 74394619 | 74394504 | ID=Msa0702670-mRNA-1:three_prime_utr;Parent=Msa0702670-mRNA-1 |
| chr4_4 | three_prime_UTR | 74393423 | 74393866 | 74393423 | ID=Msa0702670-mRNA-1:three_prime_utr;Parent=Msa0702670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
