Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297600 | RHN76102.1 | 65.772 | 149 | 46 | 2 | 116 | 260 | 254 | 401 | 9.91e-45 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297600 | sp|O65015|AMYB_TRIRP | 75.926 | 54 | 13 | 0 | 289 | 342 | 154 | 207 | 9.97e-20 | 94.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297600 | A0A396JFP7 | 65.772 | 149 | 46 | 2 | 116 | 260 | 254 | 401 | 4.73e-45 | 175 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1297600 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033880 | Msa1297600 | 0.806171 | 9.364696e-50 | -8.615850e-47 |
| Msa0036370 | Msa1297600 | 0.806025 | 1.004793e-49 | -8.615850e-47 |
| Msa0047280 | Msa1297600 | 0.817352 | 3.447516e-52 | -8.615850e-47 |
| Msa0049390 | Msa1297600 | 0.824127 | 9.549041e-54 | -8.615850e-47 |
| Msa0053690 | Msa1297600 | 0.894480 | 2.371066e-75 | -8.615850e-47 |
| Msa0053700 | Msa1297600 | 0.903067 | 5.086390e-79 | -8.615850e-47 |
| Msa0055100 | Msa1297600 | 0.819284 | 1.259240e-52 | -8.615850e-47 |
| Msa0065010 | Msa1297600 | 0.817818 | 2.706708e-52 | -8.615850e-47 |
| Msa0068020 | Msa1297600 | 0.802126 | 6.503248e-49 | -8.615850e-47 |
| Msa0070170 | Msa1297600 | 0.806610 | 7.565834e-50 | -8.615850e-47 |
| Msa0070430 | Msa1297600 | 0.811616 | 6.405760e-51 | -8.615850e-47 |
| Msa0101180 | Msa1297600 | 0.822836 | 1.914312e-53 | -8.615850e-47 |
| Msa0108870 | Msa1297600 | 0.803048 | 4.197372e-49 | -8.615850e-47 |
| Msa0115370 | Msa1297600 | 0.809549 | 1.791127e-50 | -8.615850e-47 |
| Msa0118540 | Msa1297600 | 0.808132 | 3.599240e-50 | -8.615850e-47 |
| Msa0603670 | Msa1297600 | 0.801713 | 7.907668e-49 | -8.615850e-47 |
| Msa0609220 | Msa1297600 | 0.809950 | 1.468435e-50 | -8.615850e-47 |
| Msa0618930 | Msa1297600 | 0.802829 | 4.659797e-49 | -8.615850e-47 |
| Msa0619920 | Msa1297600 | 0.842334 | 2.755737e-58 | -8.615850e-47 |
| Msa0626940 | Msa1297600 | 0.820163 | 7.928544e-53 | -8.615850e-47 |
| Msa0659140 | Msa1297600 | 0.808000 | 3.839669e-50 | -8.615850e-47 |
| Msa0659990 | Msa1297600 | 0.837154 | 6.145593e-57 | -8.615850e-47 |
| Msa0662630 | Msa1297600 | 0.817324 | 3.498511e-52 | -8.615850e-47 |
| Msa0665080 | Msa1297600 | 0.807061 | 6.076327e-50 | -8.615850e-47 |
| Msa0675990 | Msa1297600 | 0.801002 | 1.105948e-48 | -8.615850e-47 |
| Msa0687230 | Msa1297600 | 0.822876 | 1.873817e-53 | -8.615850e-47 |
| Msa0697720 | Msa1297600 | 0.802149 | 6.432338e-49 | -8.615850e-47 |
| Msa0702150 | Msa1297600 | 0.833249 | 5.943145e-56 | -8.615850e-47 |
| Msa0702270 | Msa1297600 | 0.842044 | 3.287326e-58 | -8.615850e-47 |
| Msa0702580 | Msa1297600 | 0.837038 | 6.578539e-57 | -8.615850e-47 |
| Msa0702670 | Msa1297600 | 0.841261 | 5.289990e-58 | -8.615850e-47 |
| Msa0705390 | Msa1297600 | 0.819868 | 9.265629e-53 | -8.615850e-47 |
| Msa0706390 | Msa1297600 | 0.801494 | 8.770650e-49 | -8.615850e-47 |
| Msa0747170 | Msa1297600 | 0.840394 | 8.927380e-58 | -8.615850e-47 |
| Msa0764690 | Msa1297600 | 0.808380 | 3.187274e-50 | -8.615850e-47 |
| Msa0792780 | Msa1297600 | 0.827400 | 1.598039e-54 | -8.615850e-47 |
| Msa0798090 | Msa1297600 | 0.875490 | 2.957517e-68 | -8.615850e-47 |
| Msa0798100 | Msa1297600 | 0.855683 | 5.351373e-62 | -8.615850e-47 |
| Msa0799010 | Msa1297600 | -0.803699 | 3.077339e-49 | -8.615850e-47 |
| Msa0799480 | Msa1297600 | 0.899886 | 1.270871e-77 | -8.615850e-47 |
| Msa0822170 | Msa1297600 | 0.806356 | 8.560189e-50 | -8.615850e-47 |
| Msa0832050 | Msa1297600 | 0.809814 | 1.571260e-50 | -8.615850e-47 |
| Msa0126770 | Msa1297600 | 0.810394 | 1.178200e-50 | -8.615850e-47 |
| Msa0127850 | Msa1297600 | 0.806004 | 1.015489e-49 | -8.615850e-47 |
| Msa0139990 | Msa1297600 | 0.820451 | 6.813361e-53 | -8.615850e-47 |
| Msa0161410 | Msa1297600 | 0.816788 | 4.617470e-52 | -8.615850e-47 |
| Msa0164370 | Msa1297600 | 0.977717 | 2.422204e-144 | -8.615850e-47 |
| Msa0166750 | Msa1297600 | 0.811178 | 7.970875e-51 | -8.615850e-47 |
| Msa0174000 | Msa1297600 | 0.811135 | 8.146785e-51 | -8.615850e-47 |
| Msa0183460 | Msa1297600 | 0.816326 | 5.858150e-52 | -8.615850e-47 |
| Msa0183870 | Msa1297600 | 0.817682 | 2.906077e-52 | -8.615850e-47 |
| Msa0193600 | Msa1297600 | 0.825109 | 5.606263e-54 | -8.615850e-47 |
| Msa0199570 | Msa1297600 | 0.819388 | 1.192265e-52 | -8.615850e-47 |
| Msa0202830 | Msa1297600 | 0.812695 | 3.725866e-51 | -8.615850e-47 |
| Msa0229360 | Msa1297600 | 0.804732 | 1.875895e-49 | -8.615850e-47 |
| Msa1227690 | Msa1297600 | 0.801890 | 7.273884e-49 | -8.615850e-47 |
| Msa1253400 | Msa1297600 | 0.924450 | 6.935766e-90 | -8.615850e-47 |
| Msa1253810 | Msa1297600 | 0.869141 | 3.867790e-66 | -8.615850e-47 |
| Msa1279590 | Msa1297600 | 0.939206 | 1.877025e-99 | -8.615850e-47 |
| Msa1289300 | Msa1297600 | 0.976030 | 4.720249e-141 | -8.615850e-47 |
| Msa1297600 | Msa1320580 | 0.819460 | 1.147880e-52 | -8.615850e-47 |
| Msa1297600 | Msa1323800 | 0.807611 | 4.645398e-50 | -8.615850e-47 |
| Msa1297600 | Msa1323990 | 0.836480 | 9.128809e-57 | -8.615850e-47 |
| Msa1297600 | Msa1325930 | 0.812225 | 4.717843e-51 | -8.615850e-47 |
| Msa1297600 | Msa1358430 | 0.801500 | 8.744077e-49 | -8.615850e-47 |
| Msa1297600 | Msa1372310 | 0.805638 | 1.211753e-49 | -8.615850e-47 |
| Msa1297600 | Msa1381650 | 0.810877 | 9.261955e-51 | -8.615850e-47 |
| Msa1297600 | Msa1397940 | 0.815813 | 7.628649e-52 | -8.615850e-47 |
| Msa1297600 | Msa1411950 | 0.803564 | 3.282386e-49 | -8.615850e-47 |
| Msa1297600 | Msa1424780 | 0.804814 | 1.802882e-49 | -8.615850e-47 |
| Msa1297600 | Msa1445940 | 0.811919 | 5.501319e-51 | -8.615850e-47 |
| Msa1297600 | Msa1445960 | 0.807026 | 6.179667e-50 | -8.615850e-47 |
| Msa1297600 | Msa1447890 | 0.818823 | 1.602618e-52 | -8.615850e-47 |
| Msa1297600 | Msa1455280 | 0.804933 | 1.702482e-49 | -8.615850e-47 |
| Msa0364990 | Msa1297600 | 0.917586 | 4.434792e-86 | -8.615850e-47 |
| Msa0387880 | Msa1297600 | -0.802942 | 4.416123e-49 | -8.615850e-47 |
| Msa0394690 | Msa1297600 | 0.801608 | 8.309371e-49 | -8.615850e-47 |
| Msa0398230 | Msa1297600 | 0.801296 | 9.627948e-49 | -8.615850e-47 |
| Msa0414020 | Msa1297600 | 0.917520 | 4.802976e-86 | -8.615850e-47 |
| Msa0431770 | Msa1297600 | 0.862930 | 3.574712e-64 | -8.615850e-47 |
| Msa0439890 | Msa1297600 | 0.800995 | 1.109542e-48 | -8.615850e-47 |
| Msa0458640 | Msa1297600 | 0.821716 | 3.483072e-53 | -8.615850e-47 |
| Msa0467260 | Msa1297600 | -0.810533 | 1.099586e-50 | -8.615850e-47 |
| Msa0980940 | Msa1297600 | 0.815895 | 7.311393e-52 | -8.615850e-47 |
| Msa0990830 | Msa1297600 | 0.824283 | 8.779480e-54 | -8.615850e-47 |
| Msa1004420 | Msa1297600 | 0.821775 | 3.375340e-53 | -8.615850e-47 |
| Msa1020100 | Msa1297600 | 0.815957 | 7.082592e-52 | -8.615850e-47 |
| Msa1025940 | Msa1297600 | 0.835352 | 1.763863e-56 | -8.615850e-47 |
| Msa1029970 | Msa1297600 | 0.800376 | 1.483640e-48 | -8.615850e-47 |
| Msa1059310 | Msa1297600 | 0.824732 | 6.882616e-54 | -8.615850e-47 |
| Msa1067070 | Msa1297600 | 0.911801 | 4.030293e-83 | -8.615850e-47 |
| Msa1070390 | Msa1297600 | 0.823350 | 1.452172e-53 | -8.615850e-47 |
| Msa1071530 | Msa1297600 | 0.811363 | 7.268909e-51 | -8.615850e-47 |
| Msa1083880 | Msa1297600 | 0.800950 | 1.133154e-48 | -8.615850e-47 |
| Msa1088250 | Msa1297600 | -0.803708 | 3.064128e-49 | -8.615850e-47 |
| Msa0273650 | Msa1297600 | 0.825666 | 4.138815e-54 | -8.615850e-47 |
| Msa0296920 | Msa1297600 | 0.819151 | 1.349797e-52 | -8.615850e-47 |
| Msa0313930 | Msa1297600 | 0.807942 | 3.951146e-50 | -8.615850e-47 |
| Msa0319330 | Msa1297600 | 0.833211 | 6.074969e-56 | -8.615850e-47 |
| Msa0322590 | Msa1297600 | 0.826628 | 2.443942e-54 | -8.615850e-47 |
| Msa0337500 | Msa1297600 | 0.889599 | 2.096063e-73 | -8.615850e-47 |
| Msa0337510 | Msa1297600 | 0.925905 | 9.721525e-91 | -8.615850e-47 |
| Msa1126850 | Msa1297600 | 0.804104 | 2.535635e-49 | -8.615850e-47 |
| Msa1135810 | Msa1297600 | -0.820945 | 5.244190e-53 | -8.615850e-47 |
| Msa1154490 | Msa1297600 | 0.823471 | 1.360701e-53 | -8.615850e-47 |
| Msa1158230 | Msa1297600 | 0.808116 | 3.626580e-50 | -8.615850e-47 |
| Msa1171830 | Msa1297600 | 0.804024 | 2.633810e-49 | -8.615850e-47 |
| Msa1203880 | Msa1297600 | 0.805944 | 1.044999e-49 | -8.615850e-47 |
| Msa1206650 | Msa1297600 | 0.805517 | 1.284630e-49 | -8.615850e-47 |
| Msa1211830 | Msa1297600 | 0.805061 | 1.601053e-49 | -8.615850e-47 |
| Msa0510290 | Msa1297600 | 0.800064 | 1.717545e-48 | -8.615850e-47 |
| Msa0576730 | Msa1297600 | 0.836823 | 7.465264e-57 | -8.615850e-47 |
| Msa0578090 | Msa1297600 | 0.802722 | 4.901222e-49 | -8.615850e-47 |
| Msa0590650 | Msa1297600 | 0.805231 | 1.475043e-49 | -8.615850e-47 |
| Msa0594710 | Msa1297600 | 0.813502 | 2.478448e-51 | -8.615850e-47 |
| Msa0843120 | Msa1297600 | -0.818250 | 2.162111e-52 | -8.615850e-47 |
| Msa0895310 | Msa1297600 | 0.815682 | 8.158222e-52 | -8.615850e-47 |
| Msa0903780 | Msa1297600 | 0.804283 | 2.326710e-49 | -8.615850e-47 |
| Msa0924150 | Msa1297600 | -0.811712 | 6.103674e-51 | -8.615850e-47 |
| Msa0928120 | Msa1297600 | 0.800568 | 1.356087e-48 | -8.615850e-47 |
| Msa0943170 | Msa1297600 | 0.823859 | 1.103669e-53 | -8.615850e-47 |
| Msa0943270 | Msa1297600 | 0.841442 | 4.738919e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297600 | MtrunA17_Chr2g0328391 | 65.772 | 149 | 46 | 2 | 116 | 260 | 254 | 401 | 9.12e-49 | 175 |
| Msa1297600 | MtrunA17_Chr2g0323051 | 55.769 | 104 | 36 | 3 | 265 | 368 | 211 | 304 | 1.56e-25 | 108 |
| Msa1297600 | MtrunA17_Chr4g0031721 | 43.478 | 138 | 74 | 2 | 121 | 254 | 274 | 411 | 2.35e-24 | 105 |
| Msa1297600 | MtrunA17_Chr4g0031711 | 63.014 | 73 | 27 | 0 | 140 | 212 | 340 | 412 | 4.94e-24 | 104 |
| Msa1297600 | MtrunA17_Chr3g0140681 | 61.250 | 80 | 18 | 2 | 236 | 302 | 194 | 273 | 1.00e-22 | 99.0 |
| Msa1297600 | MtrunA17_Chr4g0031701 | 61.972 | 71 | 27 | 0 | 142 | 212 | 235 | 305 | 3.07e-21 | 95.9 |
| Msa1297600 | MtrunA17_Chr7g0238891 | 48.571 | 105 | 52 | 1 | 143 | 245 | 354 | 458 | 5.27e-21 | 95.5 |
| Msa1297600 | MtrunA17_Chr4g0031731 | 62.687 | 67 | 25 | 0 | 142 | 208 | 235 | 301 | 1.70e-20 | 93.6 |
| Msa1297600 | MtrunA17_Chr4g0023601 | 57.534 | 73 | 28 | 1 | 273 | 342 | 135 | 207 | 2.33e-19 | 89.7 |
| Msa1297600 | MtrunA17_Chr2g0328381 | 41.176 | 119 | 68 | 1 | 132 | 248 | 246 | 364 | 8.06e-18 | 85.5 |
| Msa1297600 | MtrunA17_Chr2g0328361 | 58.065 | 62 | 26 | 0 | 147 | 208 | 260 | 321 | 4.15e-17 | 83.2 |
| Msa1297600 | MtrunA17_Chr2g0328341 | 60.656 | 61 | 21 | 1 | 151 | 208 | 259 | 319 | 4.78e-16 | 80.1 |
| Msa1297600 | MtrunA17_Chr2g0328401 | 56.522 | 69 | 28 | 1 | 141 | 207 | 268 | 336 | 3.44e-15 | 77.4 |
| Msa1297600 | MtrunA17_Chr4g0031741 | 61.818 | 55 | 21 | 0 | 155 | 209 | 278 | 332 | 3.78e-14 | 74.3 |
| Msa1297600 | MtrunA17_Chr2g0328411 | 51.351 | 74 | 29 | 2 | 141 | 207 | 262 | 335 | 7.44e-13 | 70.5 |
| Msa1297600 | MtrunA17_Chr2g0328431 | 50.000 | 74 | 30 | 1 | 141 | 207 | 262 | 335 | 1.46e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297600 | AT1G07530.1 | 40.000 | 130 | 74 | 2 | 129 | 254 | 362 | 491 | 3.05e-20 | 93.6 |
| Msa1297600 | AT2G32290.1 | 74.074 | 54 | 14 | 0 | 289 | 342 | 219 | 272 | 5.26e-20 | 92.4 |
| Msa1297600 | AT4G15210.2 | 68.519 | 54 | 17 | 0 | 289 | 342 | 156 | 209 | 3.85e-19 | 89.4 |
| Msa1297600 | AT4G15210.3 | 68.519 | 54 | 17 | 0 | 289 | 342 | 103 | 156 | 3.99e-19 | 89.4 |
| Msa1297600 | AT4G15210.4 | 68.519 | 54 | 17 | 0 | 289 | 342 | 103 | 156 | 3.99e-19 | 89.4 |
| Msa1297600 | AT4G15210.1 | 68.519 | 54 | 17 | 0 | 289 | 342 | 156 | 209 | 4.81e-19 | 89.4 |
| Msa1297600 | AT2G29060.2 | 39.669 | 121 | 71 | 1 | 141 | 259 | 264 | 384 | 1.76e-18 | 88.2 |
| Msa1297600 | AT2G29060.1 | 39.669 | 121 | 71 | 1 | 141 | 259 | 301 | 421 | 2.24e-18 | 87.8 |
| Msa1297600 | AT2G37650.1 | 44.444 | 99 | 53 | 1 | 149 | 245 | 335 | 433 | 2.61e-17 | 84.7 |
| Msa1297600 | AT2G37650.2 | 44.444 | 99 | 53 | 1 | 149 | 245 | 323 | 421 | 2.80e-17 | 84.3 |
| Msa1297600 | AT1G07520.2 | 61.194 | 67 | 23 | 1 | 143 | 209 | 139 | 202 | 3.66e-17 | 84.0 |
| Msa1297600 | AT1G07520.4 | 61.194 | 67 | 23 | 1 | 143 | 209 | 139 | 202 | 3.66e-17 | 84.0 |
| Msa1297600 | AT1G07520.3 | 62.121 | 66 | 22 | 1 | 143 | 208 | 304 | 366 | 3.91e-17 | 84.0 |
| Msa1297600 | AT1G07520.1 | 62.121 | 66 | 22 | 1 | 143 | 208 | 303 | 365 | 4.09e-17 | 84.0 |
| Msa1297600 | AT2G29065.1 | 60.345 | 58 | 23 | 0 | 155 | 212 | 246 | 303 | 1.09e-12 | 70.1 |
| Msa1297600 | AT4G00490.1 | 51.852 | 54 | 26 | 0 | 289 | 342 | 236 | 289 | 4.85e-12 | 68.2 |
| Msa1297600 | AT5G59450.1 | 40.659 | 91 | 53 | 1 | 123 | 212 | 188 | 278 | 5.81e-12 | 67.8 |
| Msa1297600 | AT3G46600.3 | 41.837 | 98 | 53 | 3 | 116 | 212 | 137 | 231 | 2.33e-11 | 65.9 |
| Msa1297600 | AT3G46600.1 | 41.837 | 98 | 53 | 3 | 116 | 212 | 169 | 263 | 2.60e-11 | 65.9 |
| Msa1297600 | AT2G45880.1 | 34.409 | 93 | 46 | 1 | 265 | 342 | 350 | 442 | 4.87e-11 | 65.1 |
Find 109 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGTTTATAGATTAATT+AGG | 0.166605 | 8_3:-58014548 | Msa1297600:three_prime_UTR |
| GCAGGGAGAACAAGCTTTAT+TGG | 0.217900 | 8_3:-58018466 | Msa1297600:intron |
| CAGCAGCATTAAACATCTTT+TGG | 0.245647 | 8_3:+58017504 | None:intergenic |
| TCTCGTCTTTCGCGGTTTCT+TGG | 0.271778 | 8_3:-58015831 | Msa1297600:CDS |
| ATATGTTTATAGATTAATTA+GGG | 0.278241 | 8_3:-58014547 | Msa1297600:three_prime_UTR |
| CTTCAAATAGTCAGCCATTC+TGG | 0.282618 | 8_3:+58014696 | None:intergenic |
| AGTGACTATGACAATGTAAT+TGG | 0.287106 | 8_3:-58017055 | Msa1297600:CDS |
| TACCATTAATACCTCTTCTA+TGG | 0.297338 | 8_3:+58020225 | None:intergenic |
| AAGCTTAATAGCAGCCTTAC+TGG | 0.305599 | 8_3:-58014520 | Msa1297600:three_prime_UTR |
| GGCTGGGTATTTCCTGGTAT+TGG | 0.319528 | 8_3:-58015173 | Msa1297600:CDS |
| GAAGAGTTATAAAGAGAATA+TGG | 0.323678 | 8_3:-58015288 | Msa1297600:CDS |
| GGCCATAGAAGAGGTATTAA+TGG | 0.329008 | 8_3:-58020227 | Msa1297600:CDS |
| GATGGAGGAAGAAGGGAAAT+TGG | 0.330889 | 8_3:-58020843 | Msa1297600:CDS |
| AGAAAATTACCTTGTAAGTA+TGG | 0.331370 | 8_3:+58020190 | None:intergenic |
| AGGAAGCATTCTTGTCCTTC+AGG | 0.331779 | 8_3:-58017618 | Msa1297600:CDS |
| GTTATGTGGATTTCACTCTT+TGG | 0.332758 | 8_3:-58015865 | Msa1297600:CDS |
| TCGCGGTTTCTTGGTAAAAC+AGG | 0.335407 | 8_3:-58015822 | Msa1297600:CDS |
| TGCGATTGAAGCGCATGGTT+GGG | 0.341493 | 8_3:-58017559 | Msa1297600:CDS |
| AATCCTGGACTCACCGCTTA+TGG | 0.358745 | 8_3:+58014807 | None:intergenic |
| TTTCTGCTTACTTTCAGATA+TGG | 0.359746 | 8_3:+58017025 | None:intergenic |
| CCGCTTATGGTGACATCATA+AGG | 0.359764 | 8_3:+58014820 | None:intergenic |
| TCCCTCTCATGCATGATATC+TGG | 0.374941 | 8_3:+58014777 | None:intergenic |
| TGTGGATTTGAGGACCCTTT+TGG | 0.385294 | 8_3:-58017706 | Msa1297600:CDS |
| CTTTAGGTTCCTTTGTTATG+TGG | 0.393628 | 8_3:-58015879 | Msa1297600:intron |
| CAGGTTCTACATGGTGCATC+TGG | 0.398474 | 8_3:-58017892 | Msa1297600:intron |
| TGCCTAGGCTGGGTATTTCC+TGG | 0.407995 | 8_3:-58015179 | Msa1297600:CDS |
| AGCTGATAATCTGTGTTTCA+AGG | 0.417769 | 8_3:-58018443 | Msa1297600:CDS |
| AGAAGGGAAATTGGAGAAGA+AGG | 0.422017 | 8_3:-58020834 | Msa1297600:CDS |
| ATGAATTGTTGAAGCAGAAT+AGG | 0.424251 | 8_3:-58017638 | Msa1297600:CDS |
| CTGTGTCTGCTAATGACAAT+AGG | 0.426533 | 8_3:-58017668 | Msa1297600:CDS |
| ATAAGGGCTGGTGCACCTAC+TGG | 0.427494 | 8_3:+58014837 | None:intergenic |
| AATTTCCCTTCTTCCTCCAT+CGG | 0.440960 | 8_3:+58020845 | None:intergenic |
| ATAGTCAGCCATTCTGGCTC+TGG | 0.443426 | 8_3:+58014702 | None:intergenic |
| ATGCGATTGAAGCGCATGGT+TGG | 0.447219 | 8_3:-58017560 | Msa1297600:CDS |
| TATATCTATATATATGTTCA+AGG | 0.447915 | 8_3:+58014612 | None:intergenic |
| AGAGGGATGTTGTGGATTTG+AGG | 0.451718 | 8_3:-58017716 | Msa1297600:CDS |
| ACACAGGTTGGTGAACTTGA+TGG | 0.468419 | 8_3:-58017771 | Msa1297600:CDS |
| TATGATAATTTAATCAAAGT+TGG | 0.470643 | 8_3:-58014477 | Msa1297600:three_prime_UTR |
| CATATATAATATTTGTGTAC+TGG | 0.480267 | 8_3:+58017529 | None:intergenic |
| ATATCTGGCCTCACTAATCC+TGG | 0.482839 | 8_3:+58014792 | None:intergenic |
| AAACAGCATCTCGTCTTTCG+CGG | 0.485483 | 8_3:-58015839 | Msa1297600:CDS |
| GAGGTAGGACTTGGCCCTGC+TGG | 0.486945 | 8_3:-58015230 | Msa1297600:CDS |
| CGAAGAAACAAGGGAGGAAG+AGG | 0.489890 | 8_3:-58017734 | Msa1297600:CDS |
| TTGAAGCGCATGGTTGGGGC+TGG | 0.490691 | 8_3:-58017554 | Msa1297600:CDS |
| AAGAAGCCGATGGAGGAAGA+AGG | 0.492336 | 8_3:-58020851 | None:intergenic |
| ATGTATGATAACAGTAATGT+TGG | 0.492964 | 8_3:-58019415 | Msa1297600:CDS |
| CTTATAAGCGTGTACGTGGC+AGG | 0.500665 | 8_3:-58014978 | Msa1297600:CDS |
| TCACCATAAGCGGTGAGTCC+AGG | 0.505916 | 8_3:-58014810 | Msa1297600:CDS |
| CGCTTATGGTGACATCATAA+GGG | 0.505983 | 8_3:+58014821 | None:intergenic |
| GCGATTGAAGCGCATGGTTG+GGG | 0.509648 | 8_3:-58017558 | Msa1297600:CDS |
| CGCGGTTTCTTGGTAAAACA+GGG | 0.510516 | 8_3:-58015821 | Msa1297600:CDS |
| ACCTCCTCTTCTTCTCCAGA+TGG | 0.522445 | 8_3:-58015763 | Msa1297600:intron |
| AAAGCTTAATGTAAGAATCT+CGG | 0.527749 | 8_3:+58015032 | None:intergenic |
| AGGGAGGAAGAGGGATGTTG+TGG | 0.530372 | 8_3:-58017724 | Msa1297600:CDS |
| TTGAGATTCCAGAGCCAGAA+TGG | 0.530384 | 8_3:-58014710 | Msa1297600:three_prime_UTR |
| TTGTCAAATATGAACCAGTA+AGG | 0.531051 | 8_3:+58014506 | None:intergenic |
| AGATATCTAAGTTCTCCAGC+AGG | 0.532605 | 8_3:+58015215 | None:intergenic |
| ATGGTGAAATCAAGGTCGTA+AGG | 0.534375 | 8_3:-58020273 | Msa1297600:CDS |
| AGGTGATGCATCACAGAGAA+TGG | 0.535230 | 8_3:-58017598 | Msa1297600:CDS |
| GTCGTTGCGTGCTGAACAAA+AGG | 0.535793 | 8_3:-58017817 | Msa1297600:CDS |
| CTCTGTGATGCATCACCTGA+AGG | 0.537655 | 8_3:+58017603 | None:intergenic |
| CTTGTGCACACAGAACCAAA+AGG | 0.550869 | 8_3:+58017691 | None:intergenic |
| TATGGTGACATCATAAGGGC+TGG | 0.556208 | 8_3:+58014825 | None:intergenic |
| TACATGCCATGGTGAAATCA+AGG | 0.560190 | 8_3:-58020281 | Msa1297600:CDS |
| AATGGCTGACTATTTGAAGC+AGG | 0.562267 | 8_3:-58014692 | Msa1297600:three_prime_UTR |
| CGAACCATCTGGAGAAGAAG+AGG | 0.566975 | 8_3:+58015759 | None:intergenic |
| ATGTTTATAGATTAATTAGG+GGG | 0.570090 | 8_3:-58014545 | Msa1297600:three_prime_UTR |
| GCTTTACTCATGATGCTGAA+AGG | 0.577029 | 8_3:-58015014 | Msa1297600:CDS |
| TTGTGCACACAGAACCAAAA+GGG | 0.577974 | 8_3:+58017692 | None:intergenic |
| CCTTATGATGTCACCATAAG+CGG | 0.579231 | 8_3:-58014820 | Msa1297600:CDS |
| AGAAGCCGATGGAGGAAGAA+GGG | 0.579655 | 8_3:-58020850 | None:intergenic |
| GAAAGATAAGGCCATAGAAG+AGG | 0.588351 | 8_3:-58020236 | Msa1297600:CDS |
| TTGCGTGCTGAACAAAAGGA+TGG | 0.589695 | 8_3:-58017813 | Msa1297600:CDS |
| GCCAGATATCATGCATGAGA+GGG | 0.594778 | 8_3:-58014778 | Msa1297600:exon |
| GGCCAGATATCATGCATGAG+AGG | 0.594930 | 8_3:-58014779 | Msa1297600:exon |
| AATTGAAGCTAAGAAAGATA+AGG | 0.595945 | 8_3:-58020248 | Msa1297600:CDS |
| ATAGACATTGAGGTAGGACT+TGG | 0.597655 | 8_3:-58015239 | Msa1297600:CDS |
| TGAGCTACTGATAGACATTG+AGG | 0.599509 | 8_3:-58015249 | Msa1297600:CDS |
| TGGTGAACTTGATGGAGGGA+AGG | 0.605242 | 8_3:-58017763 | Msa1297600:CDS |
| ACTAAGCCACCATACTTACA+AGG | 0.607997 | 8_3:-58020199 | Msa1297600:intron |
| CAGTCTTATAAGCGTGTACG+TGG | 0.609552 | 8_3:-58014982 | Msa1297600:CDS |
| GCGAATGCGATTGAAGCGCA+TGG | 0.613896 | 8_3:-58017564 | Msa1297600:CDS |
| AAGGCACGTTCGAAGAAACA+AGG | 0.620215 | 8_3:-58017744 | Msa1297600:CDS |
| CAGAGATCCTTAAAAGCTCG+AGG | 0.621293 | 8_3:-58014734 | Msa1297600:three_prime_UTR |
| AAATTACCTTGTAAGTATGG+TGG | 0.624420 | 8_3:+58020193 | None:intergenic |
| AATGAACTTGCTACATGCCA+TGG | 0.628116 | 8_3:-58020292 | Msa1297600:CDS |
| TATTTGAAGCAGGATGGCAA+AGG | 0.629381 | 8_3:-58014682 | Msa1297600:three_prime_UTR |
| ACATTAAATTCTCCAATACC+AGG | 0.631717 | 8_3:+58015161 | None:intergenic |
| GATATCTAAGTTCTCCAGCA+GGG | 0.632849 | 8_3:+58015216 | None:intergenic |
| CAGGTTGGTGAACTTGATGG+AGG | 0.633962 | 8_3:-58017768 | Msa1297600:CDS |
| TACCAGGAAATACCCAGCCT+AGG | 0.637604 | 8_3:+58015177 | None:intergenic |
| TGGTGAAATCAAGGTCGTAA+GGG | 0.637782 | 8_3:-58020272 | Msa1297600:CDS |
| ACAAAAGGATGGATCAGTGG+TGG | 0.638622 | 8_3:-58017802 | Msa1297600:CDS |
| CTACTGATAGACATTGAGGT+AGG | 0.639731 | 8_3:-58015245 | Msa1297600:CDS |
| AGGTTGGTGAACTTGATGGA+GGG | 0.640702 | 8_3:-58017767 | Msa1297600:CDS |
| GCTGACTATTTGAAGCAGGA+TGG | 0.643683 | 8_3:-58014688 | Msa1297600:three_prime_UTR |
| ACCATCTGGAGAAGAAGAGG+AGG | 0.646740 | 8_3:+58015762 | None:intergenic |
| GAAGAAACAAGGGAGGAAGA+GGG | 0.647199 | 8_3:-58017733 | Msa1297600:CDS |
| TATGTTTATAGATTAATTAG+GGG | 0.649576 | 8_3:-58014546 | Msa1297600:three_prime_UTR |
| TTACGACCTTGATTTCACCA+TGG | 0.665301 | 8_3:+58020275 | None:intergenic |
| CGGTGAGTCCAGGATTAGTG+AGG | 0.671978 | 8_3:-58014800 | Msa1297600:CDS |
| GCAAGGGACAGGCTTCCAGT+AGG | 0.671994 | 8_3:-58014852 | Msa1297600:intron |
| GAGTGAAATCCACATAACAA+AGG | 0.672556 | 8_3:+58015870 | None:intergenic |
| AGTGGTGGAGAGTAGAACAC+AGG | 0.692386 | 8_3:-58017787 | Msa1297600:CDS |
| TGAACAAAAGGATGGATCAG+TGG | 0.692488 | 8_3:-58017805 | Msa1297600:CDS |
| GTGGAGAGTAGAACACAGGT+TGG | 0.695448 | 8_3:-58017783 | Msa1297600:CDS |
| TGTACGTGGCAGGTTGACCG+AGG | 0.702164 | 8_3:-58014968 | Msa1297600:intron |
| CACGTTCGAAGAAACAAGGG+AGG | 0.709283 | 8_3:-58017740 | Msa1297600:CDS |
| AGGCACGTTCGAAGAAACAA+GGG | 0.717525 | 8_3:-58017743 | Msa1297600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTCATAATTATTTTTTA+TGG | + | chr8_3:58014982-58015001 | None:intergenic | 10.0% |
| !!! | TATTATGATTTATAGTTTTT+TGG | - | chr8_3:58015335-58015354 | Msa1297600:intron | 10.0% |
| !! | TATATGTTTATAGATTAATT+AGG | - | chr8_3:58020771-58020790 | Msa1297600:intron | 10.0% |
| !! | ATATGTTTATAGATTAATTA+GGG | - | chr8_3:58020772-58020791 | Msa1297600:intron | 10.0% |
| !!! | TGTATGTTGATTTTTTTATT+TGG | - | chr8_3:58015251-58015270 | Msa1297600:CDS | 15.0% |
| !!! | ATATATGTTTAGTTTGATTA+TGG | - | chr8_3:58015292-58015311 | Msa1297600:CDS | 15.0% |
| !!! | GATTTTGAAAATACTTTTAT+GGG | - | chr8_3:58015432-58015451 | Msa1297600:intron | 15.0% |
| !!! | ATGATTGAATTGTTTTTATT+TGG | - | chr8_3:58015523-58015542 | Msa1297600:intron | 15.0% |
| !! | TGATTATAATGTAAAATAAG+TGG | - | chr8_3:58017025-58017044 | Msa1297600:intron | 15.0% |
| !!! | ATATATGTTGTTTTGTAAAT+AGG | - | chr8_3:58018145-58018164 | Msa1297600:intron | 15.0% |
| !! | AAAATAAAACAACTTTCAAA+TGG | + | chr8_3:58018409-58018428 | None:intergenic | 15.0% |
| !!! | TTTATTTTACAAATGAATTG+AGG | - | chr8_3:58018421-58018440 | Msa1297600:intron | 15.0% |
| !! | AAATTATTGAGAAATAATGT+TGG | - | chr8_3:58018615-58018634 | Msa1297600:intron | 15.0% |
| !! | TTACATGAATTTAATATCTT+TGG | + | chr8_3:58019591-58019610 | None:intergenic | 15.0% |
| !! | AAAGATATTAAATTCATGTA+AGG | - | chr8_3:58019590-58019609 | Msa1297600:intron | 15.0% |
| !! | AAAGAAGTAATAATAAAAAG+TGG | + | chr8_3:58019906-58019925 | None:intergenic | 15.0% |
| !!! | CATAACAAATTTTAGTAAAA+TGG | + | chr8_3:58020407-58020426 | None:intergenic | 15.0% |
| !! | TGGAATATTTATATGAAAAT+TGG | - | chr8_3:58020440-58020459 | Msa1297600:intron | 15.0% |
| !! | TATATCTATATATATGTTCA+AGG | + | chr8_3:58020710-58020729 | None:intergenic | 15.0% |
| !! | TATGTTTATAGATTAATTAG+GGG | - | chr8_3:58020773-58020792 | Msa1297600:intron | 15.0% |
| !! | TGTTGAAATTTGATGAATTT+AGG | - | chr8_3:58014555-58014574 | Msa1297600:three_prime_UTR | 20.0% |
| !! | GTTGAAATTTGATGAATTTA+GGG | - | chr8_3:58014556-58014575 | Msa1297600:three_prime_UTR | 20.0% |
| !!! | TATTTTTGTTTTTGCTTTTG+TGG | - | chr8_3:58014677-58014696 | Msa1297600:three_prime_UTR | 20.0% |
| !! | TTTGTGAAATTGACTAAAAT+TGG | - | chr8_3:58014845-58014864 | Msa1297600:CDS | 20.0% |
| !! | ATATATGAATCTGTTCAATA+TGG | - | chr8_3:58014928-58014947 | Msa1297600:intron | 20.0% |
| !!! | TTATTTGGTGTTTGTTTTAT+AGG | - | chr8_3:58015266-58015285 | Msa1297600:CDS | 20.0% |
| !!! | GGATTTTGAAAATACTTTTA+TGG | - | chr8_3:58015431-58015450 | Msa1297600:intron | 20.0% |
| !! | TATTCTAAATAGATGTTAAC+AGG | + | chr8_3:58015560-58015579 | None:intergenic | 20.0% |
| !!! | TATTTAGAATATAGTCTGTT+TGG | - | chr8_3:58015569-58015588 | Msa1297600:intron | 20.0% |
| !!! | TGCTAAAAAATATTGACTTT+TGG | - | chr8_3:58015757-58015776 | Msa1297600:intron | 20.0% |
| !!! | TTTAGTACTTGATTTTTATC+TGG | - | chr8_3:58015803-58015822 | Msa1297600:CDS | 20.0% |
| !! | GTAAAAAAAATCTTTGCATT+GGG | + | chr8_3:58016070-58016089 | None:intergenic | 20.0% |
| !! | TGTAAAAAAAATCTTTGCAT+TGG | + | chr8_3:58016071-58016090 | None:intergenic | 20.0% |
| !! | TGTTGAAGTTGTTTATATAT+AGG | - | chr8_3:58016260-58016279 | Msa1297600:intron | 20.0% |
| !!! | TTGTAGCTTAAATTTTGAAT+TGG | - | chr8_3:58016486-58016505 | Msa1297600:intron | 20.0% |
| !!! | TGTAGCTTAAATTTTGAATT+GGG | - | chr8_3:58016487-58016506 | Msa1297600:intron | 20.0% |
| !! | AGATTTGATGAAGATAAAAA+TGG | - | chr8_3:58016538-58016557 | Msa1297600:intron | 20.0% |
| !! | GATTTGATGAAGATAAAAAT+GGG | - | chr8_3:58016539-58016558 | Msa1297600:intron | 20.0% |
| !!! | ATTTTTGAAAAACTAGCAAT+TGG | - | chr8_3:58017110-58017129 | Msa1297600:intron | 20.0% |
| !! | CATATATAATATTTGTGTAC+TGG | + | chr8_3:58017793-58017812 | None:intergenic | 20.0% |
| !!! | AATGTGCAAATTTTTTGAAA+GGG | + | chr8_3:58017878-58017897 | None:intergenic | 20.0% |
| !!! | AAATGTGCAAATTTTTTGAA+AGG | + | chr8_3:58017879-58017898 | None:intergenic | 20.0% |
| !!! | TTTAAAAAACATGGCAATTT+TGG | + | chr8_3:58017971-58017990 | None:intergenic | 20.0% |
| !!! | ACATACATCTTTAAAAAACA+TGG | + | chr8_3:58017980-58017999 | None:intergenic | 20.0% |
| !!! | GTTTTTTAAAGATGTATGTT+TGG | - | chr8_3:58017981-58018000 | Msa1297600:intron | 20.0% |
| !!! | AGAACACATATAATTGTTTT+TGG | - | chr8_3:58018489-58018508 | Msa1297600:intron | 20.0% |
| !! | GTAGGTATTTATTGAATAAA+TGG | - | chr8_3:58018538-58018557 | Msa1297600:intron | 20.0% |
| !! | TGTTATAATAATGAGTGAAT+AGG | - | chr8_3:58018642-58018661 | Msa1297600:intron | 20.0% |
| !! | ACTATATGAATTTCAGAATT+TGG | - | chr8_3:58018883-58018902 | Msa1297600:intron | 20.0% |
| !! | GTATGTAACAAACAAAAATA+TGG | + | chr8_3:58018940-58018959 | None:intergenic | 20.0% |
| !!! | ATATAGTTAGTATCACTTTT+AGG | - | chr8_3:58019021-58019040 | Msa1297600:intron | 20.0% |
| !! | ACAGACGTAATAAAATTAAT+AGG | + | chr8_3:58019139-58019158 | None:intergenic | 20.0% |
| !!! | AAGCATTTATTTTTATCTGA+TGG | - | chr8_3:58019521-58019540 | Msa1297600:intron | 20.0% |
| !! | TATTATATCTCTTTCTCTAT+AGG | - | chr8_3:58019690-58019709 | Msa1297600:intron | 20.0% |
| !! | TGAACTAAAACAAAAGAATA+CGG | + | chr8_3:58019769-58019788 | None:intergenic | 20.0% |
| !! | TGTTATGTAATGTTTAATGT+TGG | - | chr8_3:58020420-58020439 | Msa1297600:intron | 20.0% |
| !! | ATGTTTATAGATTAATTAGG+GGG | - | chr8_3:58020774-58020793 | Msa1297600:intron | 20.0% |
| !! | AATTTGATGAATTTAGGGTT+AGG | - | chr8_3:58014561-58014580 | Msa1297600:three_prime_UTR | 25.0% |
| !! | CTTGATGACTTAAAAATTGA+TGG | - | chr8_3:58014886-58014905 | Msa1297600:intron | 25.0% |
| ! | TTTAGATAGTAACATATGAG+AGG | + | chr8_3:58014956-58014975 | None:intergenic | 25.0% |
| ! | AATTGAAGCTAAGAAAGATA+AGG | - | chr8_3:58015071-58015090 | Msa1297600:intron | 25.0% |
| ! | AGAAAATTACCTTGTAAGTA+TGG | + | chr8_3:58015132-58015151 | None:intergenic | 25.0% |
| !!! | TGTTTAGTTTGATTATGGTA+TGG | - | chr8_3:58015297-58015316 | Msa1297600:CDS | 25.0% |
| !!! | CATGTTTTGGAAATTTTGTT+TGG | - | chr8_3:58015362-58015381 | Msa1297600:intron | 25.0% |
| !!! | AAATTTTGTTTGGTGTTGAA+GGG | - | chr8_3:58015372-58015391 | Msa1297600:intron | 25.0% |
| !! | TACTTTTATGGGTTTTCAAT+TGG | - | chr8_3:58015443-58015462 | Msa1297600:intron | 25.0% |
| !! | ATTTCATGTTTAACTTTGAG+AGG | - | chr8_3:58015631-58015650 | Msa1297600:intron | 25.0% |
| !!! | GAGAGGATTTTGATATAATT+TGG | - | chr8_3:58015648-58015667 | Msa1297600:intron | 25.0% |
| ! | ATGTATGATAACAGTAATGT+TGG | - | chr8_3:58015904-58015923 | Msa1297600:intron | 25.0% |
| !! | TATTTAGAATATAGTCTGTC+TGG | - | chr8_3:58015974-58015993 | Msa1297600:intron | 25.0% |
| ! | TTTATGTATCTTTCCATGAT+TGG | + | chr8_3:58016226-58016245 | None:intergenic | 25.0% |
| !! | CTTTATCACTCTTTAAGAAA+AGG | - | chr8_3:58016351-58016370 | Msa1297600:intron | 25.0% |
| !! | ACAAATGAAAGAGTACAATA+TGG | + | chr8_3:58016444-58016463 | None:intergenic | 25.0% |
| ! | AAACTGAAAAAGATTTGAGT+AGG | - | chr8_3:58016596-58016615 | Msa1297600:intron | 25.0% |
| ! | TATCTGTGATTGTAAATTTG+TGG | - | chr8_3:58016746-58016765 | Msa1297600:intron | 25.0% |
| ! | TATGTAATATTTAAGCCATG+AGG | + | chr8_3:58016990-58017009 | None:intergenic | 25.0% |
| !! | TTTTTGCCTAATCTTTCTAA+TGG | - | chr8_3:58017070-58017089 | Msa1297600:CDS | 25.0% |
| ! | AATTCTCCATTAGAAAGATT+AGG | + | chr8_3:58017079-58017098 | None:intergenic | 25.0% |
| ! | TTGAAATTTATTGTGTGATC+TGG | - | chr8_3:58017295-58017314 | Msa1297600:intron | 25.0% |
| !!! | CATAAAATGTTTTTTGCTAC+AGG | - | chr8_3:58017408-58017427 | Msa1297600:intron | 25.0% |
| ! | GTACAGAAATTTGAATTCAT+TGG | - | chr8_3:58017453-58017472 | Msa1297600:intron | 25.0% |
| !! | TTTTCTTTTTGTAAGTTGCA+TGG | + | chr8_3:58017479-58017498 | None:intergenic | 25.0% |
| ! | TTAAAGATGTATGTTTGGAT+TGG | - | chr8_3:58017986-58018005 | Msa1297600:intron | 25.0% |
| ! | ATAATTGTGTTTGTTCATGA+AGG | - | chr8_3:58018049-58018068 | Msa1297600:intron | 25.0% |
| ! | TAGGAAACTTCTATTTGATT+AGG | - | chr8_3:58018164-58018183 | Msa1297600:intron | 25.0% |
| ! | GTTAGAGATGAGAAAATTAA+GGG | + | chr8_3:58018207-58018226 | None:intergenic | 25.0% |
| ! | AGTTAGAGATGAGAAAATTA+AGG | + | chr8_3:58018208-58018227 | None:intergenic | 25.0% |
| !!! | TCTCTAACTTTTGTTTATTG+TGG | - | chr8_3:58018219-58018238 | Msa1297600:intron | 25.0% |
| !! | ATTTTACAAATGAATTGAGG+TGG | - | chr8_3:58018424-58018443 | Msa1297600:intron | 25.0% |
| !!! | TTTGGAATTTTGAACTTCAT+TGG | - | chr8_3:58018507-58018526 | Msa1297600:intron | 25.0% |
| ! | CATGTATATTATCTTGCATA+TGG | - | chr8_3:58018561-58018580 | Msa1297600:intron | 25.0% |
| ! | AGTTCCTGATGATTATATTT+AGG | - | chr8_3:58018699-58018718 | Msa1297600:intron | 25.0% |
| ! | CAAACCTAAATATAATCATC+AGG | + | chr8_3:58018706-58018725 | None:intergenic | 25.0% |
| ! | CATAAAATAAGTTATCACCA+AGG | + | chr8_3:58018766-58018785 | None:intergenic | 25.0% |
| !! | TCATTGAAGATATTTTGCAT+TGG | + | chr8_3:58018817-58018836 | None:intergenic | 25.0% |
| !! | TATCTTCAATGATTTGTGTA+TGG | - | chr8_3:58018825-58018844 | Msa1297600:intron | 25.0% |
| ! | AATTCATATAGTTGAAGAAC+TGG | + | chr8_3:58018875-58018894 | None:intergenic | 25.0% |
| ! | GTAACAAACAAAAATATGGT+GGG | + | chr8_3:58018936-58018955 | None:intergenic | 25.0% |
| ! | TGTAACAAACAAAAATATGG+TGG | + | chr8_3:58018937-58018956 | None:intergenic | 25.0% |
| !! | TTTGTTTGTTACATACTAGA+TGG | - | chr8_3:58018944-58018963 | Msa1297600:intron | 25.0% |
| !! | TTTAACTTCTAATGCAAATC+AGG | - | chr8_3:58019059-58019078 | Msa1297600:intron | 25.0% |
| ! | GTTATTGAGGGTAATTAAAT+AGG | - | chr8_3:58019327-58019346 | Msa1297600:intron | 25.0% |
| !! | TTTGGAATTTCACATACTTT+AGG | - | chr8_3:58019424-58019443 | Msa1297600:CDS | 25.0% |
| !! | TATGTTGTTTGTTCATGATT+TGG | + | chr8_3:58019665-58019684 | None:intergenic | 25.0% |
| ! | GATAGTAATAGAATATGCAA+AGG | + | chr8_3:58019802-58019821 | None:intergenic | 25.0% |
| !!! | TTCAAGTTTTGCTTATGTTT+AGG | + | chr8_3:58019870-58019889 | None:intergenic | 25.0% |
| ! | GAAGAGTTATAAAGAGAATA+TGG | - | chr8_3:58020031-58020050 | Msa1297600:intron | 25.0% |
| ! | AAAGCTTAATGTAAGAATCT+CGG | + | chr8_3:58020290-58020309 | None:intergenic | 25.0% |
| ! | ATATGAAAATTGGAAATGCA+AGG | - | chr8_3:58020450-58020469 | Msa1297600:intron | 25.0% |
| ! | TATGAAAATTGGAAATGCAA+GGG | - | chr8_3:58020451-58020470 | Msa1297600:intron | 25.0% |
| TCAAATTTCAACATGCATGA+GGG | + | chr8_3:58014548-58014567 | None:intergenic | 30.0% | |
| ATCAAATTTCAACATGCATG+AGG | + | chr8_3:58014549-58014568 | None:intergenic | 30.0% | |
| !! | TTTAGGGTTAGGTTTTCATT+TGG | - | chr8_3:58014572-58014591 | Msa1297600:three_prime_UTR | 30.0% |
| ! | TTAGGGTTAGGTTTTCATTT+GGG | - | chr8_3:58014573-58014592 | Msa1297600:three_prime_UTR | 30.0% |
| !!! | TTGTTTTTGCTTTTGTGGTT+TGG | - | chr8_3:58014682-58014701 | Msa1297600:three_prime_UTR | 30.0% |
| !!! | TTGGTGATTCTGAGTTTTTT+TGG | - | chr8_3:58014701-58014720 | Msa1297600:three_prime_UTR | 30.0% |
| !!! | TTGGTTGTTGATTCTGTTTT+TGG | - | chr8_3:58014720-58014739 | Msa1297600:three_prime_UTR | 30.0% |
| !!! | TTTTGAGATGAAATCACACT+TGG | - | chr8_3:58014802-58014821 | Msa1297600:CDS | 30.0% |
| CTTGGTATAAATTGCACATA+AGG | - | chr8_3:58014820-58014839 | Msa1297600:CDS | 30.0% | |
| !! | GTTTTAATCTGTTGCAGAAA+AGG | - | chr8_3:58015002-58015021 | Msa1297600:CDS | 30.0% |
| TACCATTAATACCTCTTCTA+TGG | + | chr8_3:58015097-58015116 | None:intergenic | 30.0% | |
| AAATTACCTTGTAAGTATGG+TGG | + | chr8_3:58015129-58015148 | None:intergenic | 30.0% | |
| ! | ACTTACAAGGTAATTTTCTG+AGG | - | chr8_3:58015133-58015152 | Msa1297600:intron | 30.0% |
| ! | ATGTGTTGTGACATGTTTTT+GGG | - | chr8_3:58015201-58015220 | Msa1297600:CDS | 30.0% |
| !!! | GTTTTTTGGTATGCATGTTT+TGG | - | chr8_3:58015349-58015368 | Msa1297600:intron | 30.0% |
| !!! | GAAATTTTGTTTGGTGTTGA+AGG | - | chr8_3:58015371-58015390 | Msa1297600:intron | 30.0% |
| ! | TTGGTTTGATACATTTAGCT+TGG | - | chr8_3:58015667-58015686 | Msa1297600:intron | 30.0% |
| !!! | ATTTAGCTTGGTGTTTTTGA+TGG | - | chr8_3:58015679-58015698 | Msa1297600:intron | 30.0% |
| ! | CACAAGATTCTAGAGAAAAT+AGG | - | chr8_3:58015715-58015734 | Msa1297600:intron | 30.0% |
| TAATCTAAACCTGTTTCAGA+TGG | + | chr8_3:58016045-58016064 | None:intergenic | 30.0% | |
| !!! | TTTTACAGAAAAGAGCATTC+TGG | - | chr8_3:58016084-58016103 | Msa1297600:intron | 30.0% |
| ! | AACTGAGCATTTAAAATCTC+TGG | + | chr8_3:58016726-58016745 | None:intergenic | 30.0% |
| GTGATTGTAAATTTGTGGTA+AGG | - | chr8_3:58016751-58016770 | Msa1297600:intron | 30.0% | |
| ! | GTTAGGTTTTTCTGTGAAAT+TGG | - | chr8_3:58016802-58016821 | Msa1297600:intron | 30.0% |
| ! | ATATTGGGGAAAAGGTTTTA+AGG | + | chr8_3:58017194-58017213 | None:intergenic | 30.0% |
| GGAAATAATTCTCAATGCAA+TGG | - | chr8_3:58017235-58017254 | Msa1297600:intron | 30.0% | |
| AATTCTCAATGCAATGGTTA+TGG | - | chr8_3:58017241-58017260 | Msa1297600:intron | 30.0% | |
| ATGAATTGTTGAAGCAGAAT+AGG | - | chr8_3:58017681-58017700 | Msa1297600:CDS | 30.0% | |
| ! | GAGTGTTTAGATTTGTTTGT+AGG | - | chr8_3:58018013-58018032 | Msa1297600:intron | 30.0% |
| !! | AAGCTAAGTTGATGTATCAT+AGG | + | chr8_3:58018089-58018108 | None:intergenic | 30.0% |
| AGTGACTATGACAATGTAAT+TGG | - | chr8_3:58018264-58018283 | Msa1297600:intron | 30.0% | |
| TTTCTGCTTACTTTCAGATA+TGG | + | chr8_3:58018297-58018316 | None:intergenic | 30.0% | |
| TCTGAATTATGAATCTTGCA+TGG | - | chr8_3:58018343-58018362 | Msa1297600:intron | 30.0% | |
| AGACTTACAAATCCTTAAAC+AGG | + | chr8_3:58018370-58018389 | None:intergenic | 30.0% | |
| ! | CAAATGGTGTAAAAGCATAT+TGG | + | chr8_3:58018393-58018412 | None:intergenic | 30.0% |
| !!! | AGACTCACAATTTTTTTCCT+TGG | - | chr8_3:58018746-58018765 | Msa1297600:intron | 30.0% |
| AATTTCTGTCTCCTTTACTT+TGG | - | chr8_3:58019280-58019299 | Msa1297600:intron | 30.0% | |
| ! | GATTTGGTTTCTAAACCATA+AGG | + | chr8_3:58019649-58019668 | None:intergenic | 30.0% |
| TCATTTAAACTTACAGACAG+TGG | + | chr8_3:58019836-58019855 | None:intergenic | 30.0% | |
| ACATTAAATTCTCCAATACC+AGG | + | chr8_3:58020161-58020180 | None:intergenic | 30.0% | |
| TGAACATATATGTATACACG+TGG | + | chr8_3:58020224-58020243 | None:intergenic | 30.0% | |
| CGTGTATACATATATGTTCA+TGG | - | chr8_3:58020224-58020243 | Msa1297600:CDS | 30.0% | |
| !! | CTCTGAGGAAATTTTGTATT+TGG | + | chr8_3:58020570-58020589 | None:intergenic | 30.0% |
| TGAAGAAACTGATGAAAAAG+AGG | - | chr8_3:58020675-58020694 | Msa1297600:intron | 30.0% | |
| GAAGAAACTGATGAAAAAGA+GGG | - | chr8_3:58020676-58020695 | Msa1297600:intron | 30.0% | |
| TTGTCAAATATGAACCAGTA+AGG | + | chr8_3:58020816-58020835 | None:intergenic | 30.0% | |
| ! | GAAGGCAAGCTTCAATTTTA+AGG | - | chr8_3:58014503-58014522 | Msa1297600:three_prime_UTR | 35.0% |
| ! | TAGGGTTAGGTTTTCATTTG+GGG | - | chr8_3:58014574-58014593 | Msa1297600:three_prime_UTR | 35.0% |
| ! | CATGTGTTGTGACATGTTTT+TGG | - | chr8_3:58015200-58015219 | Msa1297600:CDS | 35.0% |
| !!! | GACATGTTTTTGGGTATGTT+TGG | - | chr8_3:58015210-58015229 | Msa1297600:CDS | 35.0% |
| !!! | ATGTTTTTGGGTATGTTTGG+TGG | - | chr8_3:58015213-58015232 | Msa1297600:CDS | 35.0% |
| TATTGCTGAAAATGTGTGTC+TGG | - | chr8_3:58015410-58015429 | Msa1297600:intron | 35.0% | |
| TGAGTAATTGAAGACTCTTG+TGG | - | chr8_3:58015495-58015514 | Msa1297600:intron | 35.0% | |
| !! | TGGTCTCATCATTTTTCTTG+AGG | - | chr8_3:58015589-58015608 | Msa1297600:intron | 35.0% |
| !! | GTGTTTTTGATGGTTACAGT+TGG | - | chr8_3:58015689-58015708 | Msa1297600:intron | 35.0% |
| !! | TCTGGTCTCATCATTTTTCT+TGG | - | chr8_3:58015992-58016011 | Msa1297600:intron | 35.0% |
| TAAAAATAAGGAAGACAGGG+AGG | + | chr8_3:58016164-58016183 | None:intergenic | 35.0% | |
| GCGTAAAAATAAGGAAGACA+GGG | + | chr8_3:58016167-58016186 | None:intergenic | 35.0% | |
| ! | TGAGCTTTGGCGTAAAAATA+AGG | + | chr8_3:58016176-58016195 | None:intergenic | 35.0% |
| !! | TATGTGTTGCTTATGAGCTT+TGG | + | chr8_3:58016189-58016208 | None:intergenic | 35.0% |
| AACTTCATGAGTACCAATCA+TGG | - | chr8_3:58016210-58016229 | Msa1297600:intron | 35.0% | |
| TGAATTGGGTGTTCTTATTG+AGG | - | chr8_3:58016501-58016520 | Msa1297600:intron | 35.0% | |
| AGATAGTGATCCTATGATAG+AGG | - | chr8_3:58016657-58016676 | Msa1297600:intron | 35.0% | |
| TGGATTTCTGACTATGCTAT+TGG | - | chr8_3:58016685-58016704 | Msa1297600:intron | 35.0% | |
| GGATTTCTGACTATGCTATT+GGG | - | chr8_3:58016686-58016705 | Msa1297600:intron | 35.0% | |
| ! | GACTTCAGTTACTTTCATCT+TGG | - | chr8_3:58016831-58016850 | Msa1297600:intron | 35.0% |
| AGCTGATAATCTGTGTTTCA+AGG | - | chr8_3:58016876-58016895 | Msa1297600:intron | 35.0% | |
| AAGCATATTTATGCACCTCA+TGG | - | chr8_3:58016972-58016991 | Msa1297600:intron | 35.0% | |
| ! | TTTTTGCTACAGGTTCTACA+TGG | - | chr8_3:58017418-58017437 | Msa1297600:intron | 35.0% |
| ! | CAGCAGCATTAAACATCTTT+TGG | + | chr8_3:58017818-58017837 | None:intergenic | 35.0% |
| TTGTGTTTGTTCATGAAGGT+TGG | - | chr8_3:58018053-58018072 | Msa1297600:intron | 35.0% | |
| ! | GGAATTTTGAACTTCATTGG+TGG | - | chr8_3:58018510-58018529 | Msa1297600:intron | 35.0% |
| ! | CTTCAATGATTTGTGTATGG+AGG | - | chr8_3:58018828-58018847 | Msa1297600:intron | 35.0% |
| CATATAGTTGAAGAACTGGT+AGG | + | chr8_3:58018871-58018890 | None:intergenic | 35.0% | |
| !! | CACTTTTAGGTCATTGCTTT+AGG | - | chr8_3:58019034-58019053 | Msa1297600:intron | 35.0% |
| TGCAAATCAGGACAAACTAA+TGG | - | chr8_3:58019071-58019090 | Msa1297600:intron | 35.0% | |
| ! | GCATAAGCAGCTAATTCTTT+TGG | - | chr8_3:58019183-58019202 | Msa1297600:intron | 35.0% |
| AGAGTAATCAGCCAAAGTAA+AGG | + | chr8_3:58019294-58019313 | None:intergenic | 35.0% | |
| CTACAAGTGATGGTTATTGA+GGG | - | chr8_3:58019315-58019334 | Msa1297600:intron | 35.0% | |
| CATGTCATACTAATCTGTGT+TGG | - | chr8_3:58019381-58019400 | Msa1297600:intron | 35.0% | |
| ! | AAAGCTTCATGACATGGTTT+TGG | - | chr8_3:58019406-58019425 | Msa1297600:CDS | 35.0% |
| ! | CTTTAGGTTCCTTTGTTATG+TGG | - | chr8_3:58019440-58019459 | Msa1297600:CDS | 35.0% |
| GAGTGAAATCCACATAACAA+AGG | + | chr8_3:58019452-58019471 | None:intergenic | 35.0% | |
| GTTATGTGGATTTCACTCTT+TGG | - | chr8_3:58019454-58019473 | Msa1297600:CDS | 35.0% | |
| ! | TGATTTTCGCAACTTCCTTA+TGG | - | chr8_3:58019631-58019650 | Msa1297600:intron | 35.0% |
| TTCTCTATAGGTCTGCTTTA+CGG | - | chr8_3:58019702-58019721 | Msa1297600:intron | 35.0% | |
| GTCGTAACGAATATTTGCAT+AGG | + | chr8_3:58019747-58019766 | None:intergenic | 35.0% | |
| TTTCCCTTAGTTCCCTTAAT+TGG | - | chr8_3:58019979-58019998 | Msa1297600:intron | 35.0% | |
| ACACCAATTAAGGGAACTAA+GGG | + | chr8_3:58019985-58020004 | None:intergenic | 35.0% | |
| AACACCAATTAAGGGAACTA+AGG | + | chr8_3:58019986-58020005 | None:intergenic | 35.0% | |
| CTGCATCAAACACCAATTAA+GGG | + | chr8_3:58019994-58020013 | None:intergenic | 35.0% | |
| TCTGCATCAAACACCAATTA+AGG | + | chr8_3:58019995-58020014 | None:intergenic | 35.0% | |
| !!! | CTTTCTTTTTCAGAATGCCT+AGG | - | chr8_3:58020125-58020144 | Msa1297600:intron | 35.0% |
| TGTATCCTGCATATTGTTTC+AGG | - | chr8_3:58020252-58020271 | Msa1297600:CDS | 35.0% | |
| GAAATTGTTCCATCATACCT+CGG | + | chr8_3:58020371-58020390 | None:intergenic | 35.0% | |
| AGAAGGGAAATTGGAGAAGA+AGG | - | chr8_3:58014485-58014504 | Msa1297600:three_prime_UTR | 40.0% | |
| ATGCATGAGGGAAAGGAAAA+GGG | + | chr8_3:58014536-58014555 | None:intergenic | 40.0% | |
| TTTCAACATGCATGAGGGAA+AGG | + | chr8_3:58014543-58014562 | None:intergenic | 40.0% | |
| ! | AGGGTTAGGTTTTCATTTGG+GGG | - | chr8_3:58014575-58014594 | Msa1297600:three_prime_UTR | 40.0% |
| ! | AGGTTTTCATTTGGGGGAAA+AGG | - | chr8_3:58014581-58014600 | Msa1297600:three_prime_UTR | 40.0% |
| ! | GGTTTTCATTTGGGGGAAAA+GGG | - | chr8_3:58014582-58014601 | Msa1297600:three_prime_UTR | 40.0% |
| ! | TTGGGGGAAAAGGGAATTTT+AGG | - | chr8_3:58014591-58014610 | Msa1297600:three_prime_UTR | 40.0% |
| ! | TGGGGGAAAAGGGAATTTTA+GGG | - | chr8_3:58014592-58014611 | Msa1297600:three_prime_UTR | 40.0% |
| ! | CATTCAATCTGAGACATGCA+TGG | + | chr8_3:58014636-58014655 | None:intergenic | 40.0% |
| !! | AATGAACTTGCTACATGCCA+TGG | - | chr8_3:58015027-58015046 | Msa1297600:CDS | 40.0% |
| TACATGCCATGGTGAAATCA+AGG | - | chr8_3:58015038-58015057 | Msa1297600:CDS | 40.0% | |
| TTACGACCTTGATTTCACCA+TGG | + | chr8_3:58015047-58015066 | None:intergenic | 40.0% | |
| ATGGTGAAATCAAGGTCGTA+AGG | - | chr8_3:58015046-58015065 | Msa1297600:CDS | 40.0% | |
| TGGTGAAATCAAGGTCGTAA+GGG | - | chr8_3:58015047-58015066 | Msa1297600:CDS | 40.0% | |
| GAAAGATAAGGCCATAGAAG+AGG | - | chr8_3:58015083-58015102 | Msa1297600:intron | 40.0% | |
| !! | GGCCATAGAAGAGGTATTAA+TGG | - | chr8_3:58015092-58015111 | Msa1297600:intron | 40.0% |
| ACTAAGCCACCATACTTACA+AGG | - | chr8_3:58015120-58015139 | Msa1297600:intron | 40.0% | |
| TTTCAGATGGATCGTTCTAG+AGG | + | chr8_3:58016032-58016051 | None:intergenic | 40.0% | |
| ! | TAGAACGATCCATCTGAAAC+AGG | - | chr8_3:58016033-58016052 | Msa1297600:intron | 40.0% |
| GGCGTAAAAATAAGGAAGAC+AGG | + | chr8_3:58016168-58016187 | None:intergenic | 40.0% | |
| ATGGCAGACAGATGCATATA+AGG | + | chr8_3:58016425-58016444 | None:intergenic | 40.0% | |
| TAGTGATCCTATGATAGAGG+TGG | - | chr8_3:58016660-58016679 | Msa1297600:intron | 40.0% | |
| ATCCTATGATAGAGGTGGTT+TGG | - | chr8_3:58016665-58016684 | Msa1297600:intron | 40.0% | |
| ATCCAAACCACCTCTATCAT+AGG | + | chr8_3:58016670-58016689 | None:intergenic | 40.0% | |
| AGAATGACCTCACGAACAAT+TGG | + | chr8_3:58016777-58016796 | None:intergenic | 40.0% | |
| TGAGGTCATTCTCAAAGGTT+AGG | - | chr8_3:58016785-58016804 | Msa1297600:intron | 40.0% | |
| ! | TCAGTTACTTTCATCTTGGC+AGG | - | chr8_3:58016835-58016854 | Msa1297600:intron | 40.0% |
| ! | CAGTTACTTTCATCTTGGCA+GGG | - | chr8_3:58016836-58016855 | Msa1297600:intron | 40.0% |
| TTGCTACACTCACATACCTT+TGG | - | chr8_3:58016927-58016946 | Msa1297600:intron | 40.0% | |
| ATACCTTTGGATCACTTGCA+AGG | - | chr8_3:58016940-58016959 | Msa1297600:intron | 40.0% | |
| TATCCTTGCAAGTGATCCAA+AGG | + | chr8_3:58016946-58016965 | None:intergenic | 40.0% | |
| !!! | AAGGTTTTAAGGCAAGCAAC+TGG | + | chr8_3:58017183-58017202 | None:intergenic | 40.0% |
| TGGAACTGATATTGGGGAAA+AGG | + | chr8_3:58017202-58017221 | None:intergenic | 40.0% | |
| CTGTGTTGGAACTGATATTG+GGG | + | chr8_3:58017208-58017227 | None:intergenic | 40.0% | |
| GCTGTGTTGGAACTGATATT+GGG | + | chr8_3:58017209-58017228 | None:intergenic | 40.0% | |
| TGCTGTGTTGGAACTGATAT+TGG | + | chr8_3:58017210-58017229 | None:intergenic | 40.0% | |
| TATTTCCCTGATTGCTGTGT+TGG | + | chr8_3:58017222-58017241 | None:intergenic | 40.0% | |
| ! | CAACTTTCAGCTTTTTGTCG+TGG | - | chr8_3:58017371-58017390 | Msa1297600:intron | 40.0% |
| TGAACAAAAGGATGGATCAG+TGG | - | chr8_3:58017514-58017533 | Msa1297600:intron | 40.0% | |
| TTGTGCACACAGAACCAAAA+GGG | + | chr8_3:58017630-58017649 | None:intergenic | 40.0% | |
| CTGTGTCTGCTAATGACAAT+AGG | - | chr8_3:58017651-58017670 | Msa1297600:CDS | 40.0% | |
| GGCAAGCAGAGATAAAAACT+TGG | + | chr8_3:58017857-58017876 | None:intergenic | 40.0% | |
| ATCTTGCATGGTCCTGTTTA+AGG | - | chr8_3:58018355-58018374 | Msa1297600:intron | 40.0% | |
| ! | ACTTCATTGGTGGTTGAAGT+AGG | - | chr8_3:58018520-58018539 | Msa1297600:intron | 40.0% |
| GTGAGTCTTCACATACACTA+AGG | + | chr8_3:58018734-58018753 | None:intergenic | 40.0% | |
| ! | CTAGATGGCATTCACCTTTT+AGG | - | chr8_3:58018959-58018978 | Msa1297600:intron | 40.0% |
| ! | AACCATGCTGACTACCTAAA+AGG | + | chr8_3:58018976-58018995 | None:intergenic | 40.0% |
| GATTACTCTGCTACAAGTGA+TGG | - | chr8_3:58019305-58019324 | Msa1297600:intron | 40.0% | |
| GCTACAAGTGATGGTTATTG+AGG | - | chr8_3:58019314-58019333 | Msa1297600:intron | 40.0% | |
| TTGGTGAAAGCTTCATGACA+TGG | - | chr8_3:58019400-58019419 | Msa1297600:CDS | 40.0% | |
| GAATATTTGCATAGGCAACG+CGG | + | chr8_3:58019739-58019758 | None:intergenic | 40.0% | |
| TGAGCTACTGATAGACATTG+AGG | - | chr8_3:58020070-58020089 | Msa1297600:intron | 40.0% | |
| CTACTGATAGACATTGAGGT+AGG | - | chr8_3:58020074-58020093 | Msa1297600:intron | 40.0% | |
| ATAGACATTGAGGTAGGACT+TGG | - | chr8_3:58020080-58020099 | Msa1297600:intron | 40.0% | |
| GATATCTAAGTTCTCCAGCA+GGG | + | chr8_3:58020106-58020125 | None:intergenic | 40.0% | |
| AGATATCTAAGTTCTCCAGC+AGG | + | chr8_3:58020107-58020126 | None:intergenic | 40.0% | |
| !! | TTTTTCAGAATGCCTAGGCT+GGG | - | chr8_3:58020130-58020149 | Msa1297600:intron | 40.0% |
| GCTTTACTCATGATGCTGAA+AGG | - | chr8_3:58020305-58020324 | Msa1297600:intron | 40.0% | |
| AAATTGGAAATGCAAGGGAC+AGG | - | chr8_3:58020456-58020475 | Msa1297600:intron | 40.0% | |
| CGCTTATGGTGACATCATAA+GGG | + | chr8_3:58020501-58020520 | None:intergenic | 40.0% | |
| CCTTATGATGTCACCATAAG+CGG | - | chr8_3:58020499-58020518 | Msa1297600:intron | 40.0% | |
| ! | TCTCAATCCTCGAGCTTTTA+AGG | + | chr8_3:58020595-58020614 | None:intergenic | 40.0% |
| CTTCAAATAGTCAGCCATTC+TGG | + | chr8_3:58020626-58020645 | None:intergenic | 40.0% | |
| ! | AATGGCTGACTATTTGAAGC+AGG | - | chr8_3:58020627-58020646 | Msa1297600:intron | 40.0% |
| ! | TATTTGAAGCAGGATGGCAA+AGG | - | chr8_3:58020637-58020656 | Msa1297600:intron | 40.0% |
| AAGCTTAATAGCAGCCTTAC+TGG | - | chr8_3:58020799-58020818 | Msa1297600:intron | 40.0% | |
| CATGCATGAGGGAAAGGAAA+AGG | + | chr8_3:58014537-58014556 | None:intergenic | 45.0% | |
| GAAGACAGGGAGGAATATCA+AGG | + | chr8_3:58016154-58016173 | None:intergenic | 45.0% | |
| GTTCGTGAGGTCATTCTCAA+AGG | - | chr8_3:58016780-58016799 | Msa1297600:intron | 45.0% | |
| ! | GCAGGGAGAACAAGCTTTAT+TGG | - | chr8_3:58016853-58016872 | Msa1297600:intron | 45.0% |
| AAGGCAAGCAACTGGTTACA+TGG | + | chr8_3:58017175-58017194 | None:intergenic | 45.0% | |
| TCAGTTCCAACACAGCAATC+AGG | - | chr8_3:58017213-58017232 | Msa1297600:intron | 45.0% | |
| CAGTTCCAACACAGCAATCA+GGG | - | chr8_3:58017214-58017233 | Msa1297600:intron | 45.0% | |
| CTCTTGCAATCGCTTCTAGA+TGG | + | chr8_3:58017267-58017286 | None:intergenic | 45.0% | |
| TTGCGTGCTGAACAAAAGGA+TGG | - | chr8_3:58017506-58017525 | Msa1297600:intron | 45.0% | |
| ACAAAAGGATGGATCAGTGG+TGG | - | chr8_3:58017517-58017536 | Msa1297600:intron | 45.0% | |
| !! | ACACAGGTTGGTGAACTTGA+TGG | - | chr8_3:58017548-58017567 | Msa1297600:CDS | 45.0% |
| !! | AGGTTGGTGAACTTGATGGA+GGG | - | chr8_3:58017552-58017571 | Msa1297600:CDS | 45.0% |
| AAGGCACGTTCGAAGAAACA+AGG | - | chr8_3:58017575-58017594 | Msa1297600:CDS | 45.0% | |
| AGGCACGTTCGAAGAAACAA+GGG | - | chr8_3:58017576-58017595 | Msa1297600:CDS | 45.0% | |
| GAAGAAACAAGGGAGGAAGA+GGG | - | chr8_3:58017586-58017605 | Msa1297600:CDS | 45.0% | |
| AGAGGGATGTTGTGGATTTG+AGG | - | chr8_3:58017603-58017622 | Msa1297600:CDS | 45.0% | |
| ! | TGTGGATTTGAGGACCCTTT+TGG | - | chr8_3:58017613-58017632 | Msa1297600:CDS | 45.0% |
| CTTGTGCACACAGAACCAAA+AGG | + | chr8_3:58017631-58017650 | None:intergenic | 45.0% | |
| !! | AGGAAGCATTCTTGTCCTTC+AGG | - | chr8_3:58017701-58017720 | Msa1297600:CDS | 45.0% |
| AGGTGATGCATCACAGAGAA+TGG | - | chr8_3:58017721-58017740 | Msa1297600:CDS | 45.0% | |
| !! | AGGTGGTTTTTGCCACTTGA+AGG | - | chr8_3:58018441-58018460 | Msa1297600:CDS | 45.0% |
| !! | TGGTTTTTGCCACTTGAAGG+TGG | - | chr8_3:58018444-58018463 | Msa1297600:CDS | 45.0% |
| !! | CACCTTTTAGGTAGTCAGCA+TGG | - | chr8_3:58018971-58018990 | Msa1297600:intron | 45.0% |
| AAACAGCATCTCGTCTTTCG+CGG | - | chr8_3:58019480-58019499 | Msa1297600:CDS | 45.0% | |
| TCGCGGTTTCTTGGTAAAAC+AGG | - | chr8_3:58019497-58019516 | Msa1297600:intron | 45.0% | |
| CGCGGTTTCTTGGTAAAACA+GGG | - | chr8_3:58019498-58019517 | Msa1297600:intron | 45.0% | |
| !!! | CTTTTTCAGAATGCCTAGGC+TGG | - | chr8_3:58020129-58020148 | Msa1297600:intron | 45.0% |
| AGCAGCCTGAAACAATATGC+AGG | + | chr8_3:58020260-58020279 | None:intergenic | 45.0% | |
| ! | CAGTCTTATAAGCGTGTACG+TGG | - | chr8_3:58020337-58020356 | Msa1297600:intron | 45.0% |
| TATGGTGACATCATAAGGGC+TGG | + | chr8_3:58020497-58020516 | None:intergenic | 45.0% | |
| CCGCTTATGGTGACATCATA+AGG | + | chr8_3:58020502-58020521 | None:intergenic | 45.0% | |
| ATATCTGGCCTCACTAATCC+TGG | + | chr8_3:58020530-58020549 | None:intergenic | 45.0% | |
| GCCAGATATCATGCATGAGA+GGG | - | chr8_3:58020541-58020560 | Msa1297600:intron | 45.0% | |
| TCCCTCTCATGCATGATATC+TGG | + | chr8_3:58020545-58020564 | None:intergenic | 45.0% | |
| !! | CGAGCTTTTAAGGATCTCTG+AGG | + | chr8_3:58020585-58020604 | None:intergenic | 45.0% |
| CAGAGATCCTTAAAAGCTCG+AGG | - | chr8_3:58020585-58020604 | Msa1297600:intron | 45.0% | |
| TTGAGATTCCAGAGCCAGAA+TGG | - | chr8_3:58020609-58020628 | Msa1297600:intron | 45.0% | |
| ! | GCTGACTATTTGAAGCAGGA+TGG | - | chr8_3:58020631-58020650 | Msa1297600:intron | 45.0% |
| !! | AAAAAAAAAATATTGAAATA+TGG | + | chr8_3:58018112-58018131 | None:intergenic | 5.0% |
| !!! | CAATATTTTTTTTTTATTTA+TGG | - | chr8_3:58018117-58018136 | Msa1297600:intron | 5.0% |
| GGTAAGGCCAATTGTTCGTG+AGG | - | chr8_3:58016767-58016786 | Msa1297600:intron | 50.0% | |
| CAGGTTCTACATGGTGCATC+TGG | - | chr8_3:58017427-58017446 | Msa1297600:intron | 50.0% | |
| GTCGTTGCGTGCTGAACAAA+AGG | - | chr8_3:58017502-58017521 | Msa1297600:intron | 50.0% | |
| ! | AGTGGTGGAGAGTAGAACAC+AGG | - | chr8_3:58017532-58017551 | Msa1297600:CDS | 50.0% |
| GTGGAGAGTAGAACACAGGT+TGG | - | chr8_3:58017536-58017555 | Msa1297600:CDS | 50.0% | |
| !! | CAGGTTGGTGAACTTGATGG+AGG | - | chr8_3:58017551-58017570 | Msa1297600:CDS | 50.0% |
| TGGTGAACTTGATGGAGGGA+AGG | - | chr8_3:58017556-58017575 | Msa1297600:CDS | 50.0% | |
| CACGTTCGAAGAAACAAGGG+AGG | - | chr8_3:58017579-58017598 | Msa1297600:CDS | 50.0% | |
| CGAAGAAACAAGGGAGGAAG+AGG | - | chr8_3:58017585-58017604 | Msa1297600:CDS | 50.0% | |
| CTCTGTGATGCATCACCTGA+AGG | + | chr8_3:58017719-58017738 | None:intergenic | 50.0% | |
| ATGCGATTGAAGCGCATGGT+TGG | - | chr8_3:58017759-58017778 | Msa1297600:CDS | 50.0% | |
| TGCGATTGAAGCGCATGGTT+GGG | - | chr8_3:58017760-58017779 | Msa1297600:CDS | 50.0% | |
| TCCTTGAGACCACCTTCAAG+TGG | + | chr8_3:58018456-58018475 | None:intergenic | 50.0% | |
| GCTTATGCCCTCTACAACCA+AGG | + | chr8_3:58019171-58019190 | None:intergenic | 50.0% | |
| TCTCGTCTTTCGCGGTTTCT+TGG | - | chr8_3:58019488-58019507 | Msa1297600:CDS | 50.0% | |
| ACCTCCTCTTCTTCTCCAGA+TGG | - | chr8_3:58019556-58019575 | Msa1297600:intron | 50.0% | |
| ACCATCTGGAGAAGAAGAGG+AGG | + | chr8_3:58019560-58019579 | None:intergenic | 50.0% | |
| CGAACCATCTGGAGAAGAAG+AGG | + | chr8_3:58019563-58019582 | None:intergenic | 50.0% | |
| !! | CTTTGGAGTCACGAACCATC+TGG | + | chr8_3:58019574-58019593 | None:intergenic | 50.0% |
| ATAGGCAACGCGGAGTTTGA+AGG | + | chr8_3:58019729-58019748 | None:intergenic | 50.0% | |
| TACCAGGAAATACCCAGCCT+AGG | + | chr8_3:58020145-58020164 | None:intergenic | 50.0% | |
| GGCTGGGTATTTCCTGGTAT+TGG | - | chr8_3:58020146-58020165 | Msa1297600:intron | 50.0% | |
| CTTATAAGCGTGTACGTGGC+AGG | - | chr8_3:58020341-58020360 | Msa1297600:intron | 50.0% | |
| AATCCTGGACTCACCGCTTA+TGG | + | chr8_3:58020515-58020534 | None:intergenic | 50.0% | |
| GGCCAGATATCATGCATGAG+AGG | - | chr8_3:58020540-58020559 | Msa1297600:intron | 50.0% | |
| !! | ATAGTCAGCCATTCTGGCTC+TGG | + | chr8_3:58020620-58020639 | None:intergenic | 50.0% |
| AGGGAGGAAGAGGGATGTTG+TGG | - | chr8_3:58017595-58017614 | Msa1297600:CDS | 55.0% | |
| GCGAATGCGATTGAAGCGCA+TGG | - | chr8_3:58017755-58017774 | Msa1297600:CDS | 55.0% | |
| GCGATTGAAGCGCATGGTTG+GGG | - | chr8_3:58017761-58017780 | Msa1297600:CDS | 55.0% | |
| GCCACTTGAAGGTGGTCTCA+AGG | - | chr8_3:58018452-58018471 | Msa1297600:CDS | 55.0% | |
| CTACCAGCCAACAAGCTTGC+AGG | - | chr8_3:58019106-58019125 | Msa1297600:intron | 55.0% | |
| !! | AGTCCTGCAAGCTTGTTGGC+TGG | + | chr8_3:58019112-58019131 | None:intergenic | 55.0% |
| AGCCAACAAGCTTGCAGGAC+TGG | - | chr8_3:58019111-58019130 | Msa1297600:intron | 55.0% | |
| CTCCAGTCCTGCAAGCTTGT+TGG | + | chr8_3:58019116-58019135 | None:intergenic | 55.0% | |
| TGCCCTCTACAACCAAGGTG+CGG | + | chr8_3:58019166-58019185 | None:intergenic | 55.0% | |
| TGCCTAGGCTGGGTATTTCC+TGG | - | chr8_3:58020140-58020159 | Msa1297600:intron | 55.0% | |
| ! | GCAGGTTGACCGAGGTATGA+TGG | - | chr8_3:58020359-58020378 | Msa1297600:intron | 55.0% |
| ! | ATAAGGGCTGGTGCACCTAC+TGG | + | chr8_3:58020485-58020504 | None:intergenic | 55.0% |
| TCACCATAAGCGGTGAGTCC+AGG | - | chr8_3:58020509-58020528 | Msa1297600:intron | 55.0% | |
| ! | CGGTGAGTCCAGGATTAGTG+AGG | - | chr8_3:58020519-58020538 | Msa1297600:intron | 55.0% |
| TTGAAGCGCATGGTTGGGGC+TGG | - | chr8_3:58017765-58017784 | Msa1297600:CDS | 60.0% | |
| ACGTCTGTAACGCCGCACCT+TGG | - | chr8_3:58019151-58019170 | Msa1297600:intron | 60.0% | |
| ACGCCGCACCTTGGTTGTAG+AGG | - | chr8_3:58019160-58019179 | Msa1297600:intron | 60.0% | |
| CGCCGCACCTTGGTTGTAGA+GGG | - | chr8_3:58019161-58019180 | Msa1297600:intron | 60.0% | |
| ! | TGTACGTGGCAGGTTGACCG+AGG | - | chr8_3:58020351-58020370 | Msa1297600:intron | 60.0% |
| GCAAGGGACAGGCTTCCAGT+AGG | - | chr8_3:58020467-58020486 | Msa1297600:intron | 60.0% | |
| GAGGTAGGACTTGGCCCTGC+TGG | - | chr8_3:58020089-58020108 | Msa1297600:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 58014477 | 58020864 | 58014477 | ID=Msa1297600;Name=Msa1297600 |
| chr8_3 | mRNA | 58014477 | 58020864 | 58014477 | ID=Msa1297600-mRNA-1;Parent=Msa1297600;Name=Msa1297600-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.2|0.27|0.81|0.9|1|11|306|404 |
| chr8_3 | exon | 58014477 | 58014869 | 58014477 | ID=Msa1297600-mRNA-1:exon:16648;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58014969 | 58015067 | 58014969 | ID=Msa1297600-mRNA-1:exon:16647;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58015163 | 58015327 | 58015163 | ID=Msa1297600-mRNA-1:exon:16646;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58015764 | 58015895 | 58015764 | ID=Msa1297600-mRNA-1:exon:16645;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58017036 | 58017092 | 58017036 | ID=Msa1297600-mRNA-1:exon:16644;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58017518 | 58017846 | 58017518 | ID=Msa1297600-mRNA-1:exon:16643;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58017893 | 58017911 | 58017893 | ID=Msa1297600-mRNA-1:exon:16642;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58018438 | 58018484 | 58018438 | ID=Msa1297600-mRNA-1:exon:16641;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58019395 | 58019508 | 58019395 | ID=Msa1297600-mRNA-1:exon:16640;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58020200 | 58020317 | 58020200 | ID=Msa1297600-mRNA-1:exon:16639;Parent=Msa1297600-mRNA-1 |
| chr8_3 | exon | 58020817 | 58020864 | 58020817 | ID=Msa1297600-mRNA-1:exon:16638;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58020817 | 58020864 | 58020817 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58020200 | 58020317 | 58020200 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58019395 | 58019508 | 58019395 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58018438 | 58018484 | 58018438 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58017893 | 58017911 | 58017893 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58017518 | 58017846 | 58017518 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58017036 | 58017092 | 58017036 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58015764 | 58015895 | 58015764 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58015163 | 58015327 | 58015163 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58014969 | 58015067 | 58014969 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | CDS | 58014783 | 58014869 | 58014783 | ID=Msa1297600-mRNA-1:cds;Parent=Msa1297600-mRNA-1 |
| chr8_3 | three_prime_UTR | 58014477 | 58014782 | 58014477 | ID=Msa1297600-mRNA-1:three_prime_utr;Parent=Msa1297600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
