Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747170 | XP_003617201.1 | 66.138 | 189 | 29 | 2 | 53 | 206 | 18 | 206 | 1.26e-65 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747170 | sp|P25011|CCNB1_SOYBN | 53.750 | 80 | 35 | 1 | 132 | 209 | 159 | 238 | 2.20e-20 | 94.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747170 | G7KCT9 | 66.138 | 189 | 29 | 2 | 53 | 206 | 18 | 206 | 6.00e-66 | 223 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053700 | Msa0747170 | 0.804490 | 2.106995e-49 | -8.615850e-47 |
| Msa0702580 | Msa0747170 | 0.953735 | 1.423338e-111 | -8.615850e-47 |
| Msa0702670 | Msa0747170 | 0.926142 | 7.034751e-91 | -8.615850e-47 |
| Msa0747170 | Msa0799480 | 0.825289 | 5.084487e-54 | -8.615850e-47 |
| Msa0747170 | Msa1067070 | 0.809682 | 1.677370e-50 | -8.615850e-47 |
| Msa0747170 | Msa1253400 | 0.811942 | 5.440342e-51 | -8.615850e-47 |
| Msa0747170 | Msa1253810 | 0.801973 | 6.994242e-49 | -8.615850e-47 |
| Msa0747170 | Msa1279590 | 0.812135 | 4.936577e-51 | -8.615850e-47 |
| Msa0747170 | Msa1285880 | 0.806919 | 6.511209e-50 | -8.615850e-47 |
| Msa0747170 | Msa1289300 | 0.835311 | 1.807037e-56 | -8.615850e-47 |
| Msa0747170 | Msa1297600 | 0.840394 | 8.927380e-58 | -8.615850e-47 |
| Msa0747170 | Msa1369490 | 0.814743 | 1.318948e-51 | -8.615850e-47 |
| Msa0164370 | Msa0747170 | 0.843745 | 1.159576e-58 | -8.615850e-47 |
| Msa0186310 | Msa0747170 | 0.803183 | 3.936287e-49 | -8.615850e-47 |
| Msa0364990 | Msa0747170 | 0.827420 | 1.580197e-54 | -8.615850e-47 |
| Msa0414020 | Msa0747170 | 0.823752 | 1.169738e-53 | -8.615850e-47 |
| Msa0337510 | Msa0747170 | 0.821304 | 4.335808e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747170 | MtrunA17_Chr5g0441371 | 66.138 | 189 | 29 | 2 | 53 | 206 | 18 | 206 | 1.16e-69 | 223 |
| Msa0747170 | MtrunA17_Chr7g0255771 | 44.444 | 90 | 47 | 2 | 119 | 206 | 152 | 240 | 1.08e-19 | 89.7 |
| Msa0747170 | MtrunA17_Chr4g0000341 | 97.561 | 41 | 1 | 0 | 251 | 291 | 194 | 234 | 1.69e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747170 | AT2G26760.1 | 36.943 | 157 | 89 | 6 | 55 | 206 | 20 | 171 | 5.31e-20 | 90.5 |
| Msa0747170 | AT1G34460.5 | 37.791 | 172 | 78 | 7 | 64 | 206 | 142 | 313 | 7.02e-18 | 84.7 |
| Msa0747170 | AT1G34460.9 | 37.791 | 172 | 78 | 7 | 64 | 206 | 128 | 299 | 8.07e-18 | 84.7 |
| Msa0747170 | AT1G34460.7 | 37.791 | 172 | 78 | 7 | 64 | 206 | 142 | 313 | 8.28e-18 | 84.7 |
| Msa0747170 | AT1G34460.6 | 37.791 | 172 | 78 | 7 | 64 | 206 | 142 | 313 | 8.71e-18 | 84.3 |
| Msa0747170 | AT1G34460.3 | 37.791 | 172 | 78 | 7 | 64 | 206 | 142 | 313 | 8.71e-18 | 84.3 |
| Msa0747170 | AT1G34460.8 | 37.791 | 172 | 78 | 7 | 64 | 206 | 142 | 313 | 8.71e-18 | 84.3 |
| Msa0747170 | AT1G34460.1 | 37.791 | 172 | 78 | 7 | 64 | 206 | 142 | 313 | 8.71e-18 | 84.3 |
| Msa0747170 | AT1G34460.2 | 37.209 | 172 | 76 | 6 | 64 | 206 | 142 | 310 | 1.50e-17 | 83.6 |
| Msa0747170 | AT1G34460.4 | 37.209 | 172 | 76 | 6 | 64 | 206 | 142 | 310 | 1.50e-17 | 83.6 |
| Msa0747170 | AT1G78900.1 | 87.805 | 41 | 5 | 0 | 251 | 291 | 193 | 233 | 9.76e-17 | 81.6 |
| Msa0747170 | AT1G78900.2 | 87.805 | 41 | 5 | 0 | 251 | 291 | 193 | 233 | 9.76e-17 | 81.6 |
| Msa0747170 | AT4G37490.1 | 46.753 | 77 | 39 | 1 | 132 | 206 | 130 | 206 | 4.29e-15 | 76.3 |
| Msa0747170 | AT5G06150.2 | 31.443 | 194 | 82 | 6 | 64 | 206 | 30 | 223 | 4.97e-15 | 75.5 |
| Msa0747170 | AT5G06150.1 | 31.443 | 194 | 82 | 6 | 64 | 206 | 30 | 223 | 9.38e-15 | 75.1 |
| Msa0747170 | AT3G11520.1 | 49.123 | 57 | 29 | 0 | 150 | 206 | 144 | 200 | 8.18e-11 | 63.2 |
Find 93 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGGTTGATCACAAGATTT+TGG | 0.152119 | 5_1:+70820678 | None:intergenic |
| GAACATTGATTCATCTTATA+AGG | 0.243622 | 5_1:-70820234 | Msa0747170:CDS |
| TGAGAATAAGCAAAGGAATA+TGG | 0.244237 | 5_1:-70820738 | Msa0747170:intron |
| GCATCAGCCATGGCTGCTTT+TGG | 0.282508 | 5_1:-70815732 | Msa0747170:three_prime_UTR |
| CTCATCTTAGCATTTATATC+TGG | 0.296448 | 5_1:+70820020 | None:intergenic |
| AAAATTATGATACCTGTAAA+TGG | 0.306248 | 5_1:+70821128 | None:intergenic |
| ACATCTTAAAAGCCATTTAC+AGG | 0.331557 | 5_1:-70821140 | Msa0747170:intron |
| TTGTTATATCCTTCGCATAA+TGG | 0.337376 | 5_1:-70815766 | Msa0747170:three_prime_UTR |
| ATGCAGGCAATAACAATGAT+AGG | 0.342766 | 5_1:-70819844 | Msa0747170:intron |
| GCCGATACTCCTCTTCTTAC+TGG | 0.357840 | 5_1:-70819133 | Msa0747170:CDS |
| TTGTTGCAGGGCTCAGTTAG+AGG | 0.361146 | 5_1:-70820522 | Msa0747170:intron |
| TAGAGTTGTGCCCAAGGATT+TGG | 0.364250 | 5_1:-70820261 | Msa0747170:CDS |
| TCATCAGAAGAACGCTTTGC+GGG | 0.383815 | 5_1:+70815951 | None:intergenic |
| CAAATGTACCTTGTTCTTCT+CGG | 0.392731 | 5_1:+70820481 | None:intergenic |
| GAGAATAAGCAAAGGAATAT+GGG | 0.397417 | 5_1:-70820737 | Msa0747170:CDS |
| GTGATCAACCCGGCAGATCT+TGG | 0.415654 | 5_1:-70820668 | Msa0747170:CDS |
| TTTAATTTCTTTGCCCAACT+TGG | 0.419752 | 5_1:+70815872 | None:intergenic |
| AAAATACCCAAGGATGAAAC+TGG | 0.424434 | 5_1:+70815840 | None:intergenic |
| ATATGATACAAAGAGTAATC+TGG | 0.431534 | 5_1:+70815548 | None:intergenic |
| ATGAGGGTGATGGAGATTCC+AGG | 0.435593 | 5_1:-70821175 | Msa0747170:CDS |
| TACCTTGTTCTTCTCGGCTG+CGG | 0.437360 | 5_1:+70820487 | None:intergenic |
| AATGTTCTCAACCAAATCCT+TGG | 0.445831 | 5_1:+70820250 | None:intergenic |
| AAGATCCTCACTTACATCCT+TGG | 0.447048 | 5_1:+70816611 | None:intergenic |
| GCTAGCAGAATCATAATTGA+AGG | 0.450621 | 5_1:-70821493 | Msa0747170:intron |
| TACTCCTCTTCTTACTGGTC+AGG | 0.451031 | 5_1:-70819128 | Msa0747170:intron |
| TCAGCACCTTGTGAGGCGTT+TGG | 0.453049 | 5_1:+70820628 | None:intergenic |
| GAGGACACTAGAGTGGGAAT+TGG | 0.456363 | 5_1:-70821533 | Msa0747170:CDS |
| ATCACCCTCATCAAACGCTT+TGG | 0.464468 | 5_1:+70821187 | None:intergenic |
| AAGTGACCAGTTTCATCCTT+GGG | 0.464945 | 5_1:-70815846 | Msa0747170:three_prime_UTR |
| TGAGATCAATTCTTATTGAC+TGG | 0.470841 | 5_1:-70820001 | Msa0747170:CDS |
| TCCTTGGATAAGAGCCGCTC+TGG | 0.474125 | 5_1:+70816627 | None:intergenic |
| TTTCTTGGTGGCCTTGAGCA+TGG | 0.482520 | 5_1:-70819368 | Msa0747170:CDS |
| AGATGTTCCAAAGTGAGTCC+TGG | 0.483831 | 5_1:+70821157 | None:intergenic |
| AAAGAAGTTCACCATGCCTC+AGG | 0.486057 | 5_1:-70819294 | Msa0747170:intron |
| TGTGCAATCACTGCAACAAC+AGG | 0.487175 | 5_1:-70817421 | Msa0747170:CDS |
| GCATTAGCACCAAGATCTGC+CGG | 0.492988 | 5_1:+70820659 | None:intergenic |
| TTCATCAGAAGAACGCTTTG+CGG | 0.499048 | 5_1:+70815950 | None:intergenic |
| TGTTCGTGTGCATGATTACA+TGG | 0.502047 | 5_1:-70820051 | Msa0747170:CDS |
| GAAGTGACCAGTTTCATCCT+TGG | 0.503118 | 5_1:-70815847 | Msa0747170:three_prime_UTR |
| GGAGATTCCAGGACTCACTT+TGG | 0.503348 | 5_1:-70821164 | Msa0747170:CDS |
| GCATGTTCCACCCTTGCTGC+AGG | 0.503352 | 5_1:+70820344 | None:intergenic |
| TGGCGGAAGAAAACTGTGTC+AGG | 0.509632 | 5_1:+70815892 | None:intergenic |
| AATTTCTTTGCCCAACTTGG+CGG | 0.517688 | 5_1:+70815875 | None:intergenic |
| ATGTTCTCAACCAAATCCTT+GGG | 0.520528 | 5_1:+70820251 | None:intergenic |
| ACAGGCCTCGGTGTACGTAC+AGG | 0.529911 | 5_1:+70819172 | None:intergenic |
| TTAGCTCCTCATGTTGTGAA+TGG | 0.530707 | 5_1:-70816709 | Msa0747170:three_prime_UTR |
| CATTGTTCCTGCAGCAAGGG+TGG | 0.537294 | 5_1:-70820351 | Msa0747170:CDS |
| AAACTGTGTCAGGTTACAAT+CGG | 0.540666 | 5_1:+70815902 | None:intergenic |
| GTTTGATAGTTGAACTGCCA+TGG | 0.541365 | 5_1:-70816651 | Msa0747170:three_prime_UTR |
| CACTAGAGTGGGAATTGGCA+AGG | 0.548048 | 5_1:-70821528 | Msa0747170:CDS |
| GGCATTCGAGGTTACTTGAA+GGG | 0.551138 | 5_1:-70819811 | Msa0747170:CDS |
| ATAAGAGCCGCTCTGGTCCA+TGG | 0.552906 | 5_1:+70816634 | None:intergenic |
| GTGTTGGAACTTGAGTTTCA+AGG | 0.559419 | 5_1:-70819323 | Msa0747170:CDS |
| CACCTAACCAAAAGCAGCCA+TGG | 0.562153 | 5_1:+70815725 | None:intergenic |
| ACCAGTAAGAAGAGGAGTAT+CGG | 0.562952 | 5_1:+70819132 | None:intergenic |
| TGCTTGTAGAGTTGTGCCCA+AGG | 0.562989 | 5_1:-70820267 | Msa0747170:CDS |
| AGAACATTGTTCCTGCAGCA+AGG | 0.565140 | 5_1:-70820355 | Msa0747170:CDS |
| GGGAATGAAGAAGGCATTCG+AGG | 0.565338 | 5_1:-70819823 | Msa0747170:CDS |
| TTCCTCTCTTACCATGCTCA+AGG | 0.571680 | 5_1:+70819357 | None:intergenic |
| TTGCGAAGTTATTTGATCTG+CGG | 0.573378 | 5_1:-70815795 | Msa0747170:three_prime_UTR |
| GAACATTGTTCCTGCAGCAA+GGG | 0.574930 | 5_1:-70820354 | Msa0747170:CDS |
| GAGGAGAGAGGACACTAGAG+TGG | 0.575461 | 5_1:-70821540 | Msa0747170:CDS |
| GGCCTTGAGCATGGTAAGAG+AGG | 0.580399 | 5_1:-70819359 | Msa0747170:CDS |
| AAAGCGTTTGATGAGGGTGA+TGG | 0.580444 | 5_1:-70821185 | Msa0747170:CDS |
| CATTAGCACCAAGATCTGCC+GGG | 0.580889 | 5_1:+70820660 | None:intergenic |
| TGCAGGCAATAACAATGATA+GGG | 0.583450 | 5_1:-70819843 | Msa0747170:intron |
| AATAACTTCGCAAGATACAA+TGG | 0.587194 | 5_1:+70815805 | None:intergenic |
| CAACACCAAAGCGTTTGATG+AGG | 0.592407 | 5_1:-70821192 | Msa0747170:CDS |
| AGGCATTCGAGGTTACTTGA+AGG | 0.593231 | 5_1:-70819812 | Msa0747170:CDS |
| AGAATAAGCAAAGGAATATG+GGG | 0.597705 | 5_1:-70820736 | Msa0747170:CDS |
| ACAATGATAGGGAATGAAGA+AGG | 0.601397 | 5_1:-70819832 | Msa0747170:CDS |
| TATTTATAAGTACAACAAAG+TGG | 0.602644 | 5_1:+70815630 | None:intergenic |
| AGGAGAGAGGACACTAGAGT+GGG | 0.604291 | 5_1:-70821539 | Msa0747170:CDS |
| TATGGAATCAGCACCTTGTG+AGG | 0.606345 | 5_1:+70820621 | None:intergenic |
| CTTACCTGACCAGTAAGAAG+AGG | 0.608391 | 5_1:+70819124 | None:intergenic |
| AACACCAAAGCGTTTGATGA+GGG | 0.608391 | 5_1:-70821191 | Msa0747170:CDS |
| ACCAGAGCGGCTCTTATCCA+AGG | 0.610602 | 5_1:-70816628 | Msa0747170:three_prime_UTR |
| CCAAAATCTTGTGATCAACC+CGG | 0.612472 | 5_1:-70820678 | Msa0747170:CDS |
| TCACATCCATTCACAACATG+AGG | 0.614060 | 5_1:+70816703 | None:intergenic |
| AATCAAAAGCCATTATGCGA+AGG | 0.618602 | 5_1:+70815757 | None:intergenic |
| GAACATAATTTGTCAAACAC+AGG | 0.618989 | 5_1:-70820291 | Msa0747170:CDS |
| ATCACTGCAACAACAGGTTG+AGG | 0.619338 | 5_1:-70817415 | Msa0747170:intron |
| ATGTCACCAAACGCCTCACA+AGG | 0.630342 | 5_1:-70820634 | Msa0747170:intron |
| AGCCGCAGCCGAGAAGAACA+AGG | 0.634015 | 5_1:-70820489 | Msa0747170:intron |
| ACTAGAGTGGGAATTGGCAA+GGG | 0.655908 | 5_1:-70821527 | Msa0747170:CDS |
| GTGGCCATAAACCTGAGGCA+TGG | 0.663532 | 5_1:+70819283 | None:intergenic |
| GGTTGAAGGAAGAAACAGAA+AGG | 0.663667 | 5_1:-70820714 | Msa0747170:CDS |
| GAGTAAGATTACATTCAGCA+AGG | 0.663833 | 5_1:+70816784 | None:intergenic |
| GAATAAGCAAAGGAATATGG+GGG | 0.677599 | 5_1:-70820735 | Msa0747170:CDS |
| AATTAGGTGAGAATAAGCAA+AGG | 0.691149 | 5_1:-70820745 | Msa0747170:intron |
| AGATATCTGCATTATGTGTG+TGG | 0.692302 | 5_1:+70816753 | None:intergenic |
| TGAACTGCCATGGACCAGAG+CGG | 0.740700 | 5_1:-70816641 | Msa0747170:three_prime_UTR |
| GTTGGCCTGTACGTACACCG+AGG | 0.801438 | 5_1:-70819177 | Msa0747170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTAGCAAATAA+TGG | + | chr5_1:70821404-70821423 | None:intergenic | 10.0% |
| !! | ACTTCTATAAAATAATATAA+AGG | - | chr5_1:70821884-70821903 | Msa0747170:intron | 10.0% |
| !!! | TATTTTGTTTTTTTTTTTTG+TGG | - | chr5_1:70821979-70821998 | Msa0747170:intron | 10.0% |
| !!! | ACTTCAATTTATTTATTTTT+TGG | - | chr5_1:70822201-70822220 | Msa0747170:intron | 10.0% |
| !! | ATTTCCAAAATAACAAAATA+CGG | + | chr5_1:70816449-70816468 | None:intergenic | 15.0% |
| !! | AAATTGAATGTAAAAATTGT+AGG | - | chr5_1:70817363-70817382 | Msa0747170:intron | 15.0% |
| !!! | AAACTTTTCATATCATAAAT+TGG | + | chr5_1:70817755-70817774 | None:intergenic | 15.0% |
| !!! | TATGAAAAGTTTTTTATTTG+TGG | - | chr5_1:70817763-70817782 | Msa0747170:intron | 15.0% |
| !!! | ATGAAAAGTTTTTTATTTGT+GGG | - | chr5_1:70817764-70817783 | Msa0747170:intron | 15.0% |
| !!! | TGATTGATTTTTAATGAATT+TGG | - | chr5_1:70817887-70817906 | Msa0747170:intron | 15.0% |
| !! | TAATTTCAATTGTAAAGTTA+TGG | + | chr5_1:70818556-70818575 | None:intergenic | 15.0% |
| !! | CAATAAAAACAAATAAAATC+AGG | + | chr5_1:70818614-70818633 | None:intergenic | 15.0% |
| !! | GATTTGTAGAAAATATTAAA+GGG | - | chr5_1:70819516-70819535 | Msa0747170:intron | 15.0% |
| !!! | ACAATTTTTTTCATTAAAAC+GGG | + | chr5_1:70819764-70819783 | None:intergenic | 15.0% |
| !!! | CACAATTTTTTTCATTAAAA+CGG | + | chr5_1:70819765-70819784 | None:intergenic | 15.0% |
| !! | TGTATATTAAGTTATAATGA+AGG | + | chr5_1:70819940-70819959 | None:intergenic | 15.0% |
| !! | TCATTATAACTTAATATACA+TGG | - | chr5_1:70819940-70819959 | Msa0747170:intron | 15.0% |
| !!! | GAAAAGATTTTACTAAATTA+CGG | - | chr5_1:70821248-70821267 | Msa0747170:intron | 15.0% |
| !!! | AAAAGATTTTACTAAATTAC+GGG | - | chr5_1:70821249-70821268 | Msa0747170:intron | 15.0% |
| !!! | ATTTTCAACATATTTATTTC+TGG | - | chr5_1:70821472-70821491 | Msa0747170:intron | 15.0% |
| !!! | TTATTTCTGGTTTTTTTTTT+TGG | - | chr5_1:70821485-70821504 | Msa0747170:intron | 15.0% |
| !!! | TTCTTTTCTTATTAGATAAA+TGG | - | chr5_1:70821679-70821698 | Msa0747170:intron | 15.0% |
| !! | TAATTTATTACTACTATTCA+AGG | - | chr5_1:70821797-70821816 | Msa0747170:intron | 15.0% |
| !! | AAATACTTCAATTTAGTTAA+TGG | - | chr5_1:70822230-70822249 | Msa0747170:intron | 15.0% |
| !!! | TGTTTTCATTATATTCTTAA+AGG | - | chr5_1:70822871-70822890 | Msa0747170:intron | 15.0% |
| !! | AATCACTTTAGCTAAATTAA+TGG | + | chr5_1:70816160-70816179 | None:intergenic | 20.0% |
| !! | TATAAAGTAAGAATACGTAT+AGG | + | chr5_1:70816269-70816288 | None:intergenic | 20.0% |
| !! | TTTCCAAAATAACAAAATAC+GGG | + | chr5_1:70816448-70816467 | None:intergenic | 20.0% |
| !!! | TATTTTCGTCATTTAGTAAT+TGG | - | chr5_1:70816690-70816709 | Msa0747170:three_prime_UTR | 20.0% |
| !!! | ATTTTCGTCATTTAGTAATT+GGG | - | chr5_1:70816691-70816710 | Msa0747170:three_prime_UTR | 20.0% |
| !! | AGGAAATTTAGCATATATAT+GGG | + | chr5_1:70816725-70816744 | None:intergenic | 20.0% |
| !! | AAGGAAATTTAGCATATATA+TGG | + | chr5_1:70816726-70816745 | None:intergenic | 20.0% |
| !! | AAAATTATGATACCTGTAAA+TGG | + | chr5_1:70818031-70818050 | None:intergenic | 20.0% |
| !! | CTTTATACAATTCTTGTATA+AGG | + | chr5_1:70818132-70818151 | None:intergenic | 20.0% |
| !!! | ATTAATTTGTTCTGTGTATA+TGG | - | chr5_1:70818196-70818215 | Msa0747170:intron | 20.0% |
| !!! | TTAATTTGTTCTGTGTATAT+GGG | - | chr5_1:70818197-70818216 | Msa0747170:intron | 20.0% |
| !!! | TGATTTATGCTTTTTGTTAA+TGG | - | chr5_1:70818388-70818407 | Msa0747170:intron | 20.0% |
| !! | TTTAGTGATACAATGTATTA+AGG | + | chr5_1:70818750-70818769 | None:intergenic | 20.0% |
| !!! | TATCACTAAATTTGTTTTGA+TGG | - | chr5_1:70818760-70818779 | Msa0747170:intron | 20.0% |
| !!! | CTTTGCTTATGAAATTTTTA+AGG | - | chr5_1:70819429-70819448 | Msa0747170:intron | 20.0% |
| !! | ATTTATTATATCACATGTTC+AGG | - | chr5_1:70819476-70819495 | Msa0747170:intron | 20.0% |
| !! | GGATTTGTAGAAAATATTAA+AGG | - | chr5_1:70819515-70819534 | Msa0747170:intron | 20.0% |
| !!! | CGTTTTAATGAAAAAAATTG+TGG | - | chr5_1:70819763-70819782 | Msa0747170:intron | 20.0% |
| !! | TTAAGTTATAATGAAGGATA+AGG | + | chr5_1:70819934-70819953 | None:intergenic | 20.0% |
| !! | AGTGAAGGATTTATATTTAT+TGG | - | chr5_1:70820111-70820130 | Msa0747170:intron | 20.0% |
| !! | ATTTCATTATGTAGTCTAAT+TGG | + | chr5_1:70820982-70821001 | None:intergenic | 20.0% |
| !!! | ATGATTTATTCTTTTCATCA+GGG | - | chr5_1:70821086-70821105 | Msa0747170:intron | 20.0% |
| !! | CAGCAAAATTATTATAAGAA+AGG | + | chr5_1:70821113-70821132 | None:intergenic | 20.0% |
| !!! | CTTTCTTATAATAATTTTGC+TGG | - | chr5_1:70821111-70821130 | Msa0747170:intron | 20.0% |
| !!! | AATCTTTTCTTAGTATAAGA+CGG | + | chr5_1:70821237-70821256 | None:intergenic | 20.0% |
| !! | AAATATGTTGAAAATGTTGT+AGG | + | chr5_1:70821467-70821486 | None:intergenic | 20.0% |
| !!! | TTAATACTTTAAAGATTGCA+AGG | + | chr5_1:70821780-70821799 | None:intergenic | 20.0% |
| !! | AATATTACATCTGATAGAAA+AGG | + | chr5_1:70822128-70822147 | None:intergenic | 20.0% |
| !!! | CTAAAGTGTATAATTTTCTT+TGG | + | chr5_1:70822761-70822780 | None:intergenic | 20.0% |
| !!! | ATAATTAGTATCGAACATAT+AGG | + | chr5_1:70823026-70823045 | None:intergenic | 20.0% |
| !!! | AAGTAATAGTTTTCATATAG+TGG | + | chr5_1:70823075-70823094 | None:intergenic | 20.0% |
| !! | TATTTATAAGTACAACAAAG+TGG | + | chr5_1:70823529-70823548 | None:intergenic | 20.0% |
| ! | AGAAGAGAATATGAAGAAAA+CGG | + | chr5_1:70815651-70815670 | None:intergenic | 25.0% |
| ! | GATCTCAATTTCTTAAGAAA+TGG | - | chr5_1:70815778-70815797 | Msa0747170:three_prime_UTR | 25.0% |
| ! | AAATAGAGTAGAGAGAATAA+GGG | + | chr5_1:70815860-70815879 | None:intergenic | 25.0% |
| ! | AGAGATAGTTTACTCATTTA+CGG | + | chr5_1:70815915-70815934 | None:intergenic | 25.0% |
| ! | AATTAATGGAATTGACAGAA+GGG | + | chr5_1:70816146-70816165 | None:intergenic | 25.0% |
| ! | AAATTAATGGAATTGACAGA+AGG | + | chr5_1:70816147-70816166 | None:intergenic | 25.0% |
| ! | TAACAAAATACGGGTATATA+TGG | + | chr5_1:70816439-70816458 | None:intergenic | 25.0% |
| !!! | ATACCCGTATTTTGTTATTT+TGG | - | chr5_1:70816442-70816461 | Msa0747170:intron | 25.0% |
| ! | TATTTAACTGAAATGAGTAG+TGG | - | chr5_1:70816564-70816583 | Msa0747170:intron | 25.0% |
| !! | TTTTCGTCATTTAGTAATTG+GGG | - | chr5_1:70816692-70816711 | Msa0747170:three_prime_UTR | 25.0% |
| !!! | TTGATTTTTTAGAGAGAGAA+GGG | + | chr5_1:70816800-70816819 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTTAGAGAGAGA+AGG | + | chr5_1:70816801-70816820 | None:intergenic | 25.0% |
| !! | ACTTGTTAGATCATTAGATT+AGG | + | chr5_1:70816924-70816943 | None:intergenic | 25.0% |
| !!! | TATGGTGAGTTTTGTTTAAT+TGG | - | chr5_1:70817041-70817060 | Msa0747170:intron | 25.0% |
| !!! | ATGGTGAGTTTTGTTTAATT+GGG | - | chr5_1:70817042-70817061 | Msa0747170:intron | 25.0% |
| ! | GTTAATCTTTGATCAAAAAC+AGG | - | chr5_1:70817198-70817217 | Msa0747170:intron | 25.0% |
| !!! | TTGTTTACTGATTTTTTTCC+AGG | - | chr5_1:70817274-70817293 | Msa0747170:intron | 25.0% |
| ! | TATGATAATTTCATCCCATA+AGG | - | chr5_1:70817316-70817335 | Msa0747170:intron | 25.0% |
| ! | TTACATAGAACATACCTTAT+GGG | + | chr5_1:70817333-70817352 | None:intergenic | 25.0% |
| ! | TTTACATAGAACATACCTTA+TGG | + | chr5_1:70817334-70817353 | None:intergenic | 25.0% |
| !!! | TGGTTTTAGCATAAATTTTC+AGG | - | chr5_1:70817594-70817613 | Msa0747170:intron | 25.0% |
| !!! | TTTTAGCATAAATTTTCAGG+AGG | - | chr5_1:70817597-70817616 | Msa0747170:intron | 25.0% |
| !!! | GATAAGTTTTATGTGTATGT+TGG | - | chr5_1:70817797-70817816 | Msa0747170:intron | 25.0% |
| ! | GTTTAAATTAGTGATTTCCT+GGG | - | chr5_1:70817824-70817843 | Msa0747170:intron | 25.0% |
| !! | TTTTTCATACTATGCATATG+TGG | - | chr5_1:70817935-70817954 | Msa0747170:intron | 25.0% |
| !!! | TTTGAGCTTATTTGATTTTC+TGG | - | chr5_1:70818082-70818101 | Msa0747170:intron | 25.0% |
| !!! | AGATTTTGAAATGAAATCTG+AGG | - | chr5_1:70818236-70818255 | Msa0747170:intron | 25.0% |
| !!! | GATTTTGAAATGAAATCTGA+GGG | - | chr5_1:70818237-70818256 | Msa0747170:intron | 25.0% |
| ! | TTAGGGTTTATGTAATAATC+TGG | - | chr5_1:70818275-70818294 | Msa0747170:intron | 25.0% |
| !!! | TGCTTTTTGTTAATGGAATT+AGG | - | chr5_1:70818395-70818414 | Msa0747170:intron | 25.0% |
| ! | TTGTAAAGATATACAACATG+TGG | + | chr5_1:70818587-70818606 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTATTGTTGTTGC+AGG | - | chr5_1:70818621-70818640 | Msa0747170:intron | 25.0% |
| !!! | TTGTTTTTATTGTTGTTGCA+GGG | - | chr5_1:70818622-70818641 | Msa0747170:intron | 25.0% |
| !! | TTACTTTGTTCCATTTTCAA+AGG | - | chr5_1:70818716-70818735 | Msa0747170:intron | 25.0% |
| !!! | GAACATTGATTCATCTTATA+AGG | - | chr5_1:70818922-70818941 | Msa0747170:intron | 25.0% |
| ! | TATTTATTGCCCATATTAGA+TGG | - | chr5_1:70819235-70819254 | Msa0747170:intron | 25.0% |
| !! | TTTTGTCAAAAAAGATATGC+AGG | - | chr5_1:70819296-70819315 | Msa0747170:CDS | 25.0% |
| ! | GTGATATAATAAATTCGTGA+AGG | + | chr5_1:70819470-70819489 | None:intergenic | 25.0% |
| ! | TAATAACAGTTCTCATTGAA+AGG | - | chr5_1:70819615-70819634 | Msa0747170:intron | 25.0% |
| ! | CTTTACAAAAAGAAAGAAAG+TGG | + | chr5_1:70819668-70819687 | None:intergenic | 25.0% |
| !! | AAAAAAATTGTGGCTTTTCT+TGG | - | chr5_1:70819773-70819792 | Msa0747170:intron | 25.0% |
| ! | TCAATCAAGCAACTAAAAAA+GGG | + | chr5_1:70819899-70819918 | None:intergenic | 25.0% |
| ! | TTCAATCAAGCAACTAAAAA+AGG | + | chr5_1:70819900-70819919 | None:intergenic | 25.0% |
| !! | GATTTATATTTATTGGCTGT+TGG | - | chr5_1:70820118-70820137 | Msa0747170:intron | 25.0% |
| ! | TGAATGAAATATCATCAAAG+TGG | + | chr5_1:70820430-70820449 | None:intergenic | 25.0% |
| !! | TTGATGATATTTCATTCAAG+TGG | - | chr5_1:70820432-70820451 | Msa0747170:intron | 25.0% |
| ! | ACAAAAAATGACGATTATGT+GGG | + | chr5_1:70820865-70820884 | None:intergenic | 25.0% |
| !!! | ACATAATCGTCATTTTTTGT+CGG | - | chr5_1:70820865-70820884 | Msa0747170:intron | 25.0% |
| !!! | ATTTTTTGTCGGAAATACAT+GGG | - | chr5_1:70820876-70820895 | Msa0747170:intron | 25.0% |
| ! | TAATGAAATTAGACTGAATC+AGG | - | chr5_1:70820993-70821012 | Msa0747170:intron | 25.0% |
| !! | GATGATTTATTCTTTTCATC+AGG | - | chr5_1:70821085-70821104 | Msa0747170:intron | 25.0% |
| ! | AAATAAAGGAAACAGAATGA+GGG | + | chr5_1:70821204-70821223 | None:intergenic | 25.0% |
| ! | ACGGAATGAAAATCAAATAA+AGG | + | chr5_1:70821218-70821237 | None:intergenic | 25.0% |
| !!! | TGTTGATTTGATCTATAATG+TGG | - | chr5_1:70821275-70821294 | Msa0747170:intron | 25.0% |
| ! | AAAACATACAAATCAATGAG+TGG | + | chr5_1:70821365-70821384 | None:intergenic | 25.0% |
| !!! | TAATGTGCAAGATATTTTTG+CGG | - | chr5_1:70821520-70821539 | Msa0747170:CDS | 25.0% |
| !!! | GTTTTAAAAACACATCAAGA+AGG | + | chr5_1:70821571-70821590 | None:intergenic | 25.0% |
| ! | CTAAAAGAGATAGCAAATTA+AGG | + | chr5_1:70821621-70821640 | None:intergenic | 25.0% |
| !! | GTTAATTTTTCTGATGTCTT+CGG | - | chr5_1:70821655-70821674 | Msa0747170:intron | 25.0% |
| !! | TGCATATCCTTAATTTGATT+GGG | + | chr5_1:70822299-70822318 | None:intergenic | 25.0% |
| !! | ATGCATATCCTTAATTTGAT+TGG | + | chr5_1:70822300-70822319 | None:intergenic | 25.0% |
| !!! | ATTTTAATTTTGCCTTCCAT+AGG | - | chr5_1:70822346-70822365 | Msa0747170:intron | 25.0% |
| !!! | TTTTCTTTGGAAGATAAAGT+AGG | + | chr5_1:70822748-70822767 | None:intergenic | 25.0% |
| ! | AAAAGATGCAACTTATTATC+TGG | - | chr5_1:70822782-70822801 | Msa0747170:intron | 25.0% |
| ! | ATGATTGATGTTATGAAAGT+TGG | + | chr5_1:70822831-70822850 | None:intergenic | 25.0% |
| ! | TTTCATAACATCAATCATCT+TGG | - | chr5_1:70822833-70822852 | Msa0747170:intron | 25.0% |
| ! | ATATGATACAAAGAGTAATC+TGG | + | chr5_1:70823611-70823630 | None:intergenic | 25.0% |
| TTAAAATGAATCTCAGCCAT+TGG | - | chr5_1:70815710-70815729 | Msa0747170:three_prime_UTR | 30.0% | |
| CAATTTCTTAAGAAATGGAG+AGG | - | chr5_1:70815783-70815802 | Msa0747170:three_prime_UTR | 30.0% | |
| AATAGAGTAGAGAGAATAAG+GGG | + | chr5_1:70815859-70815878 | None:intergenic | 30.0% | |
| GAAATAGAGTAGAGAGAATA+AGG | + | chr5_1:70815861-70815880 | None:intergenic | 30.0% | |
| !! | TTTGGTAGTGAAGAGAAATA+GGG | - | chr5_1:70816019-70816038 | Msa0747170:intron | 30.0% |
| AAGAGAGACTAAAAACATGT+GGG | - | chr5_1:70816042-70816061 | Msa0747170:intron | 30.0% | |
| !! | TTTTGGAGAGAAAGGATTTT+GGG | + | chr5_1:70816073-70816092 | None:intergenic | 30.0% |
| AAAACTGAGAAGAAATGGAA+GGG | - | chr5_1:70816089-70816108 | Msa0747170:intron | 30.0% | |
| ! | AATTGACAGAAGGGTATAAT+AGG | + | chr5_1:70816137-70816156 | None:intergenic | 30.0% |
| AAAAAGTAACACTGCGTTAA+TGG | + | chr5_1:70816242-70816261 | None:intergenic | 30.0% | |
| AAAGAGTAACACTGCATTAA+TGG | + | chr5_1:70816377-70816396 | None:intergenic | 30.0% | |
| ! | CTATAAAGTATGAAAGCGTA+TGG | + | chr5_1:70816405-70816424 | None:intergenic | 30.0% |
| AAAATACGGGTATATATGGA+GGG | + | chr5_1:70816435-70816454 | None:intergenic | 30.0% | |
| GGGCAAAATTGTAAAATCAA+CGG | + | chr5_1:70816660-70816679 | None:intergenic | 30.0% | |
| TTTCGTCATTTAGTAATTGG+GGG | - | chr5_1:70816693-70816712 | Msa0747170:three_prime_UTR | 30.0% | |
| !! | ATGTGTGAAATTTGTTGGAA+AGG | + | chr5_1:70816876-70816895 | None:intergenic | 30.0% |
| TTTGCATGTGTGAAATTTGT+TGG | + | chr5_1:70816881-70816900 | None:intergenic | 30.0% | |
| ACCATAAATCAGAATTCAGT+GGG | + | chr5_1:70816964-70816983 | None:intergenic | 30.0% | |
| !!! | TATGGTGAGTTTTGTTTGAT+TGG | - | chr5_1:70816978-70816997 | Msa0747170:intron | 30.0% |
| !!! | ATGGTGAGTTTTGTTTGATT+GGG | - | chr5_1:70816979-70816998 | Msa0747170:intron | 30.0% |
| ACACACTCAATTCTGATTTA+TGG | - | chr5_1:70817023-70817042 | Msa0747170:intron | 30.0% | |
| !!! | TCTTGTGATTTTGATTGTGT+AGG | - | chr5_1:70817133-70817152 | Msa0747170:intron | 30.0% |
| !! | ATTAAAATCTAGAAGTGTCC+TGG | + | chr5_1:70817295-70817314 | None:intergenic | 30.0% |
| GGTTTATCTATACAGTAACA+TGG | - | chr5_1:70817574-70817593 | Msa0747170:intron | 30.0% | |
| GGTTTAAATTAGTGATTTCC+TGG | - | chr5_1:70817823-70817842 | Msa0747170:intron | 30.0% | |
| ACATCTTAAAAGCCATTTAC+AGG | - | chr5_1:70818016-70818035 | Msa0747170:intron | 30.0% | |
| ! | GCTCAAACTCTTATAGTTTT+TGG | + | chr5_1:70818069-70818088 | None:intergenic | 30.0% |
| ACAAAAAATTCAACGTGAGA+TGG | + | chr5_1:70818175-70818194 | None:intergenic | 30.0% | |
| GGTGGTTTAGTTAAGTATTA+GGG | - | chr5_1:70818258-70818277 | Msa0747170:intron | 30.0% | |
| GAAAATGTTTAGTGAATCCA+CGG | - | chr5_1:70818297-70818316 | Msa0747170:intron | 30.0% | |
| AAAATGTTTAGTGAATCCAC+GGG | - | chr5_1:70818298-70818317 | Msa0747170:intron | 30.0% | |
| AGCAGAAAAATGTACAACAA+AGG | + | chr5_1:70818329-70818348 | None:intergenic | 30.0% | |
| ! | TGTTGTACATTTTTCTGCTA+TGG | - | chr5_1:70818330-70818349 | Msa0747170:intron | 30.0% |
| AATTAGGTGAGAATAAGCAA+AGG | - | chr5_1:70818411-70818430 | Msa0747170:intron | 30.0% | |
| TGAGAATAAGCAAAGGAATA+TGG | - | chr5_1:70818418-70818437 | Msa0747170:intron | 30.0% | |
| GAGAATAAGCAAAGGAATAT+GGG | - | chr5_1:70818419-70818438 | Msa0747170:intron | 30.0% | |
| AGAATAAGCAAAGGAATATG+GGG | - | chr5_1:70818420-70818439 | Msa0747170:intron | 30.0% | |
| ! | GAACATAATTTGTCAAACAC+AGG | - | chr5_1:70818865-70818884 | Msa0747170:intron | 30.0% |
| CTCATCTTAGCATTTATATC+TGG | + | chr5_1:70819139-70819158 | None:intergenic | 30.0% | |
| TGAGATCAATTCTTATTGAC+TGG | - | chr5_1:70819155-70819174 | Msa0747170:CDS | 30.0% | |
| GATCCAAATCCATCTAATAT+GGG | + | chr5_1:70819247-70819266 | None:intergenic | 30.0% | |
| AGATCCAAATCCATCTAATA+TGG | + | chr5_1:70819248-70819267 | None:intergenic | 30.0% | |
| AAATTTCATAAGCAAAGAGC+TGG | + | chr5_1:70819426-70819445 | None:intergenic | 30.0% | |
| ! | TCAGGTCTAAGTTATACTTT+TGG | - | chr5_1:70819494-70819513 | Msa0747170:intron | 30.0% |
| !! | CTCAAAAAAAGTTGATGTCA+TGG | + | chr5_1:70819595-70819614 | None:intergenic | 30.0% |
| CAATCAAGCAACTAAAAAAG+GGG | + | chr5_1:70819898-70819917 | None:intergenic | 30.0% | |
| TAGTTGCTTGATTGAAGTAT+TGG | - | chr5_1:70819904-70819923 | Msa0747170:intron | 30.0% | |
| TGTTAAAATATGTTCGTGTC+AGG | - | chr5_1:70820217-70820236 | Msa0747170:CDS | 30.0% | |
| GTTAAAATATGTTCGTGTCA+GGG | - | chr5_1:70820218-70820237 | Msa0747170:CDS | 30.0% | |
| ATCTGCAGGTAAACAATTAT+AGG | - | chr5_1:70820300-70820319 | Msa0747170:CDS | 30.0% | |
| TATTCTATCTGGCTATTCTA+AGG | + | chr5_1:70820841-70820860 | None:intergenic | 30.0% | |
| GACAAAAAATGACGATTATG+TGG | + | chr5_1:70820866-70820885 | None:intergenic | 30.0% | |
| !!! | CATTTTTTGTCGGAAATACA+TGG | - | chr5_1:70820875-70820894 | Msa0747170:intron | 30.0% |
| TAGAATTCAGAAGCCAAAAA+AGG | - | chr5_1:70820905-70820924 | Msa0747170:intron | 30.0% | |
| !!! | TCCAAAACAACATCCTTTTT+TGG | + | chr5_1:70820921-70820940 | None:intergenic | 30.0% |
| AAGATACTTACAATCTACCA+AGG | + | chr5_1:70821170-70821189 | None:intergenic | 30.0% | |
| AATAAAGGAAACAGAATGAG+GGG | + | chr5_1:70821203-70821222 | None:intergenic | 30.0% | |
| CAAATAAAGGAAACAGAATG+AGG | + | chr5_1:70821205-70821224 | None:intergenic | 30.0% | |
| TATAATGTGGTACTTATTGC+AGG | - | chr5_1:70821288-70821307 | Msa0747170:intron | 30.0% | |
| GAATAAATATGTTATGCTGC+AGG | + | chr5_1:70821316-70821335 | None:intergenic | 30.0% | |
| ATTCAGGAAAATCTGTTTAG+TGG | - | chr5_1:70821435-70821454 | Msa0747170:intron | 30.0% | |
| !!! | TGGTTTTTTTTTTTGGAGTG+AGG | - | chr5_1:70821492-70821511 | Msa0747170:intron | 30.0% |
| AACACCAACGGAAATAAAAA+AGG | - | chr5_1:70821856-70821875 | Msa0747170:intron | 30.0% | |
| ACACCAACGGAAATAAAAAA+GGG | - | chr5_1:70821857-70821876 | Msa0747170:intron | 30.0% | |
| !!! | TTTCCCTTTTTTATTTCCGT+TGG | + | chr5_1:70821863-70821882 | None:intergenic | 30.0% |
| TTTGCAGTAAGATGAATATG+TGG | - | chr5_1:70822015-70822034 | Msa0747170:intron | 30.0% | |
| TTGCAGTAAGATGAATATGT+GGG | - | chr5_1:70822016-70822035 | Msa0747170:intron | 30.0% | |
| ! | GCATATCCTTAATTTGATTG+GGG | + | chr5_1:70822298-70822317 | None:intergenic | 30.0% |
| ATCATACAGATTTAACTCCT+TGG | - | chr5_1:70822569-70822588 | Msa0747170:intron | 30.0% | |
| ATTCGGACACATTTATGATT+TGG | + | chr5_1:70822681-70822700 | None:intergenic | 30.0% | |
| TTGCGTATTAGCAATAATAG+AGG | - | chr5_1:70822897-70822916 | Msa0747170:intron | 30.0% | |
| ! | CTTTTGTCAAAATTCTACTG+TGG | - | chr5_1:70822963-70822982 | Msa0747170:intron | 30.0% |
| ! | AGAAAGATTGTTGTTGCAAT+GGG | + | chr5_1:70823141-70823160 | None:intergenic | 30.0% |
| ! | AAGAAAGATTGTTGTTGCAA+TGG | + | chr5_1:70823142-70823161 | None:intergenic | 30.0% |
| GATAATGATTCGAAACAGTT+TGG | - | chr5_1:70823172-70823191 | Msa0747170:intron | 30.0% | |
| ! | TTTAATTTCTTTGCCCAACT+TGG | + | chr5_1:70823287-70823306 | None:intergenic | 30.0% |
| !!! | TTTCATCCTTGGGTATTTTT+TGG | - | chr5_1:70823320-70823339 | Msa0747170:intron | 30.0% |
| TATCTTCCAAAAAATACCCA+AGG | + | chr5_1:70823329-70823348 | None:intergenic | 30.0% | |
| AATAACTTCGCAAGATACAA+TGG | + | chr5_1:70823354-70823373 | None:intergenic | 30.0% | |
| TTGTTATATCCTTCGCATAA+TGG | - | chr5_1:70823390-70823409 | Msa0747170:intron | 30.0% | |
| TATGGTCTGAACCAATACTA+TGG | + | chr5_1:70815591-70815610 | None:intergenic | 35.0% | |
| TTACTCATTTACGGTGTGTT+TGG | + | chr5_1:70815906-70815925 | None:intergenic | 35.0% | |
| AAATAGAGAAGAGAGAGTGA+AGG | - | chr5_1:70815959-70815978 | Msa0747170:three_prime_UTR | 35.0% | |
| TTTCTCTTCACTACCAAACA+GGG | + | chr5_1:70816017-70816036 | None:intergenic | 35.0% | |
| ATTTCTCTTCACTACCAAAC+AGG | + | chr5_1:70816018-70816037 | None:intergenic | 35.0% | |
| !! | GTTTGGTAGTGAAGAGAAAT+AGG | - | chr5_1:70816018-70816037 | Msa0747170:intron | 35.0% |
| GAAGAGAGACTAAAAACATG+TGG | - | chr5_1:70816041-70816060 | Msa0747170:intron | 35.0% | |
| !!! | GTTTTGGAGAGAAAGGATTT+TGG | + | chr5_1:70816074-70816093 | None:intergenic | 35.0% |
| TCTCCAAAACTGAGAAGAAA+TGG | - | chr5_1:70816084-70816103 | Msa0747170:intron | 35.0% | |
| ! | CTTCCATTTCTTCTCAGTTT+TGG | + | chr5_1:70816090-70816109 | None:intergenic | 35.0% |
| CAAAACTGAGAAGAAATGGA+AGG | - | chr5_1:70816088-70816107 | Msa0747170:intron | 35.0% | |
| AACACTGCGTTAATGGAATA+CGG | + | chr5_1:70816235-70816254 | None:intergenic | 35.0% | |
| CAAAATACGGGTATATATGG+AGG | + | chr5_1:70816436-70816455 | None:intergenic | 35.0% | |
| ! | TTTACAATTTTGCCCTCAGA+AGG | - | chr5_1:70816665-70816684 | Msa0747170:three_prime_UTR | 35.0% |
| ! | TTACAATTTTGCCCTCAGAA+GGG | - | chr5_1:70816666-70816685 | Msa0747170:three_prime_UTR | 35.0% |
| ! | GTTTTGTAGTGAGAGAAAGT+TGG | + | chr5_1:70816767-70816786 | None:intergenic | 35.0% |
| ACCCACTGAATTCTGATTTA+TGG | - | chr5_1:70816960-70816979 | Msa0747170:intron | 35.0% | |
| CACCATAAATCAGAATTCAG+TGG | + | chr5_1:70816965-70816984 | None:intergenic | 35.0% | |
| TTGATTGTGTAGGTATGAAG+AGG | - | chr5_1:70817143-70817162 | Msa0747170:intron | 35.0% | |
| TGATTGTGTAGGTATGAAGA+GGG | - | chr5_1:70817144-70817163 | Msa0747170:intron | 35.0% | |
| TGTTGAAATGCACAGTGAAA+AGG | - | chr5_1:70817441-70817460 | Msa0747170:CDS | 35.0% | |
| ! | TGTTATGACCACTTGCATTT+TGG | - | chr5_1:70817521-70817540 | Msa0747170:intron | 35.0% |
| AAGTTAGTCCAAAATGCAAG+TGG | + | chr5_1:70817532-70817551 | None:intergenic | 35.0% | |
| ! | TGCATGACTTTTGTATCTAC+TGG | - | chr5_1:70817553-70817572 | Msa0747170:intron | 35.0% |
| !! | ATAAATTTTCAGGAGGAGAG+AGG | - | chr5_1:70817604-70817623 | Msa0747170:intron | 35.0% |
| GCTAGCAGAATCATAATTGA+AGG | - | chr5_1:70817663-70817682 | Msa0747170:intron | 35.0% | |
| !! | TTTTTATTTGTGGGCTGAAC+AGG | - | chr5_1:70817773-70817792 | Msa0747170:intron | 35.0% |
| ! | GTTTTATGTGTATGTTGGTC+AGG | - | chr5_1:70817802-70817821 | Msa0747170:intron | 35.0% |
| AACTTATCATCAACAAACCC+AGG | + | chr5_1:70817844-70817863 | None:intergenic | 35.0% | |
| ! | TTTGAAATGAAATCTGAGGG+TGG | - | chr5_1:70818240-70818259 | Msa0747170:intron | 35.0% |
| GGGTGGTTTAGTTAAGTATT+AGG | - | chr5_1:70818257-70818276 | Msa0747170:intron | 35.0% | |
| GAATAAGCAAAGGAATATGG+GGG | - | chr5_1:70818421-70818440 | Msa0747170:intron | 35.0% | |
| CAAATGTACCTTGTTCTTCT+CGG | + | chr5_1:70818678-70818697 | None:intergenic | 35.0% | |
| ! | GGAAACACAACCTTTGAAAA+TGG | + | chr5_1:70818729-70818748 | None:intergenic | 35.0% |
| ATGTTCTCAACCAAATCCTT+GGG | + | chr5_1:70818908-70818927 | None:intergenic | 35.0% | |
| AATGTTCTCAACCAAATCCT+TGG | + | chr5_1:70818909-70818928 | None:intergenic | 35.0% | |
| TTGACTTTGATGAATGACAC+AGG | - | chr5_1:70819078-70819097 | Msa0747170:intron | 35.0% | |
| ! | TTGCCCATATTAGATGGATT+TGG | - | chr5_1:70819241-70819260 | Msa0747170:intron | 35.0% |
| ATGCAGGCAATAACAATGAT+AGG | - | chr5_1:70819312-70819331 | Msa0747170:CDS | 35.0% | |
| TGCAGGCAATAACAATGATA+GGG | - | chr5_1:70819313-70819332 | Msa0747170:CDS | 35.0% | |
| ACAATGATAGGGAATGAAGA+AGG | - | chr5_1:70819324-70819343 | Msa0747170:CDS | 35.0% | |
| CTGGATGACTCTATAAGTTA+TGG | + | chr5_1:70819407-70819426 | None:intergenic | 35.0% | |
| ! | AAAATTGTGGCTTTTCTTGG+TGG | - | chr5_1:70819776-70819795 | Msa0747170:intron | 35.0% |
| ! | AGGAAAGTTTTGCATTGTGT+TGG | - | chr5_1:70819817-70819836 | Msa0747170:CDS | 35.0% |
| ATCCTTCACTCAGACTAATA+AGG | + | chr5_1:70820101-70820120 | None:intergenic | 35.0% | |
| TGGTCTCCTATATTTCTTCT+TGG | - | chr5_1:70820138-70820157 | Msa0747170:intron | 35.0% | |
| GGTTCACCAAGAAGAAATAT+AGG | + | chr5_1:70820147-70820166 | None:intergenic | 35.0% | |
| GGTAATATGAAGGAATGACA+TGG | + | chr5_1:70820273-70820292 | None:intergenic | 35.0% | |
| GATGACATTGGGTAATATGA+AGG | + | chr5_1:70820283-70820302 | None:intergenic | 35.0% | |
| TGACTAAAACTACCTCTCAT+CGG | - | chr5_1:70820393-70820412 | Msa0747170:intron | 35.0% | |
| ! | ACACACACTATTGTTCTAGA+TGG | - | chr5_1:70820693-70820712 | Msa0747170:CDS | 35.0% |
| TTCAAGTGATAGGATTCTGA+AGG | - | chr5_1:70820784-70820803 | Msa0747170:intron | 35.0% | |
| ! | ATTATGTGGGCTATTCTATC+TGG | + | chr5_1:70820852-70820871 | None:intergenic | 35.0% |
| !! | GCCAAAAAAGGATGTTGTTT+TGG | - | chr5_1:70820917-70820936 | Msa0747170:intron | 35.0% |
| ! | AAAGTGAGGCATCAAAGTTT+AGG | - | chr5_1:70821018-70821037 | Msa0747170:intron | 35.0% |
| ! | CTTAGTCTTTCAACTCACAT+AGG | - | chr5_1:70821063-70821082 | Msa0747170:intron | 35.0% |
| ATCAAGGAACCAAATGAACT+TGG | + | chr5_1:70821144-70821163 | None:intergenic | 35.0% | |
| ! | TTTGGTTCCTTGATAAACCT+TGG | - | chr5_1:70821150-70821169 | Msa0747170:CDS | 35.0% |
| CAATCTACCAAGGTTTATCA+AGG | + | chr5_1:70821160-70821179 | None:intergenic | 35.0% | |
| ! | TTTTTCTTCCAGCAACATTC+AGG | - | chr5_1:70821419-70821438 | Msa0747170:intron | 35.0% |
| ! | TGGAAATGAGTCGGTATTTT+GGG | + | chr5_1:70821593-70821612 | None:intergenic | 35.0% |
| GATAGCAAATTAAGGAATCC+TGG | + | chr5_1:70821613-70821632 | None:intergenic | 35.0% | |
| TGCAGTAAGATGAATATGTG+GGG | - | chr5_1:70822017-70822036 | Msa0747170:intron | 35.0% | |
| ATAATGCACAATATGTGCAG+GGG | + | chr5_1:70822064-70822083 | None:intergenic | 35.0% | |
| GATAATGCACAATATGTGCA+GGG | + | chr5_1:70822065-70822084 | None:intergenic | 35.0% | |
| GTATGACCCCAATCAAATTA+AGG | - | chr5_1:70822289-70822308 | Msa0747170:intron | 35.0% | |
| GAGTAAGATTACATTCAGCA+AGG | + | chr5_1:70822375-70822394 | None:intergenic | 35.0% | |
| AGATATCTGCATTATGTGTG+TGG | + | chr5_1:70822406-70822425 | None:intergenic | 35.0% | |
| AAGTGAATAGTTCACTTCCA+AGG | + | chr5_1:70822589-70822608 | None:intergenic | 35.0% | |
| TGGAAGTGAACTATTCACTT+TGG | - | chr5_1:70822589-70822608 | Msa0747170:intron | 35.0% | |
| AAGTGAACTATTCACTTTGG+AGG | - | chr5_1:70822592-70822611 | Msa0747170:intron | 35.0% | |
| AGTGAACTATTCACTTTGGA+GGG | - | chr5_1:70822593-70822612 | Msa0747170:intron | 35.0% | |
| ATGAGACCATGACTGATATT+CGG | + | chr5_1:70822698-70822717 | None:intergenic | 35.0% | |
| ! | AGTATCGAACATATAGGTGT+AGG | + | chr5_1:70823020-70823039 | None:intergenic | 35.0% |
| ! | TTGTTGTTGCAATGGGAATA+AGG | + | chr5_1:70823134-70823153 | None:intergenic | 35.0% |
| AAACTGTGTCAGGTTACAAT+CGG | + | chr5_1:70823257-70823276 | None:intergenic | 35.0% | |
| AAAATACCCAAGGATGAAAC+TGG | + | chr5_1:70823319-70823338 | None:intergenic | 35.0% | |
| TTGCGAAGTTATTTGATCTG+CGG | - | chr5_1:70823361-70823380 | Msa0747170:intron | 35.0% | |
| AATCAAAAGCCATTATGCGA+AGG | + | chr5_1:70823402-70823421 | None:intergenic | 35.0% | |
| !!! | TTTTGATTTTGCATCAGCCA+TGG | - | chr5_1:70823414-70823433 | Msa0747170:intron | 35.0% |
| GATGGTAAGTCACAGTAATG+AGG | - | chr5_1:70815547-70815566 | Msa0747170:three_prime_UTR | 40.0% | |
| AAGTCACAGTAATGAGGAGA+AGG | - | chr5_1:70815553-70815572 | Msa0747170:three_prime_UTR | 40.0% | |
| !! | TATTGGTTCAGACCATAGAG+AGG | - | chr5_1:70815594-70815613 | Msa0747170:three_prime_UTR | 40.0% |
| GTGGCACATTAAAACTCCAA+TGG | + | chr5_1:70815729-70815748 | None:intergenic | 40.0% | |
| ! | AGTTTGGTCTTTCTCTTGCA+TGG | + | chr5_1:70815833-70815852 | None:intergenic | 40.0% |
| AGAGAATAAGGGGAGAAGTT+TGG | + | chr5_1:70815849-70815868 | None:intergenic | 40.0% | |
| !! | GTGTTTGGTTGGTGAGAAAT+AGG | + | chr5_1:70815891-70815910 | None:intergenic | 40.0% |
| TCATTTACGGTGTGTTTGGT+TGG | + | chr5_1:70815902-70815921 | None:intergenic | 40.0% | |
| GATAGTGAAGTTACCCTGTT+TGG | - | chr5_1:70816001-70816020 | Msa0747170:intron | 40.0% | |
| !!! | CTTCTCAGTTTTGGAGAGAA+AGG | + | chr5_1:70816081-70816100 | None:intergenic | 40.0% |
| ! | TACAATTTTGCCCTCAGAAG+GGG | - | chr5_1:70816667-70816686 | Msa0747170:three_prime_UTR | 40.0% |
| GTGGAGAAATGAGAGAAAGA+AGG | + | chr5_1:70816745-70816764 | None:intergenic | 40.0% | |
| TTGTAGTGAGAGAAAGTTGG+TGG | + | chr5_1:70816764-70816783 | None:intergenic | 40.0% | |
| TCCTTCTCTCTTCTCAAACA+CGG | - | chr5_1:70816833-70816852 | Msa0747170:intron | 40.0% | |
| TGCACAGTGAAAAGGAAAAG+AGG | - | chr5_1:70817449-70817468 | Msa0747170:CDS | 40.0% | |
| CAGATTTCTGAGTTGCAAGT+AGG | - | chr5_1:70817485-70817504 | Msa0747170:intron | 40.0% | |
| ATACTATGCATATGTGGCAG+AGG | - | chr5_1:70817941-70817960 | Msa0747170:intron | 40.0% | |
| ! | AACACCAAAGCGTTTGATGA+GGG | - | chr5_1:70817965-70817984 | Msa0747170:intron | 40.0% |
| GGTTGAAGGAAGAAACAGAA+AGG | - | chr5_1:70818442-70818461 | Msa0747170:intron | 40.0% | |
| CCAAAATCTTGTGATCAACC+CGG | - | chr5_1:70818478-70818497 | Msa0747170:intron | 40.0% | |
| TGTTCGTGTGCATGATTACA+TGG | - | chr5_1:70819105-70819124 | Msa0747170:intron | 40.0% | |
| ACTGGTTGATTGAAGTGTAC+AGG | - | chr5_1:70819173-70819192 | Msa0747170:CDS | 40.0% | |
| CAGGAAATTTGAACTCATGC+TGG | - | chr5_1:70819192-70819211 | Msa0747170:intron | 40.0% | |
| GTTTGCATCGCTACGTATTA+GGG | - | chr5_1:70819381-70819400 | Msa0747170:CDS | 40.0% | |
| AAACGATTACCTCTCTGTTG+TGG | - | chr5_1:70819542-70819561 | Msa0747170:intron | 40.0% | |
| AACGATTACCTCTCTGTTGT+GGG | - | chr5_1:70819543-70819562 | Msa0747170:intron | 40.0% | |
| GTGTTGGAACTTGAGTTTCA+AGG | - | chr5_1:70819833-70819852 | Msa0747170:CDS | 40.0% | |
| TCAAGCAACTAAAAAAGGGG+TGG | + | chr5_1:70819895-70819914 | None:intergenic | 40.0% | |
| ! | GGTGTACCAATTTTCAGAGT+TGG | - | chr5_1:70819961-70819980 | Msa0747170:intron | 40.0% |
| ! | TACAGGCCAACTCTGAAAAT+TGG | + | chr5_1:70819970-70819989 | None:intergenic | 40.0% |
| ! | ACCAGTAAGAAGAGGAGTAT+CGG | + | chr5_1:70820027-70820046 | None:intergenic | 40.0% |
| ! | TGCCTTATTAGTCTGAGTGA+AGG | - | chr5_1:70820096-70820115 | Msa0747170:intron | 40.0% |
| ACACAACCAGAACTATCACT+TGG | + | chr5_1:70820168-70820187 | None:intergenic | 40.0% | |
| ! | TTCTGGTTGTGTCTTTCACT+TGG | - | chr5_1:70820176-70820195 | Msa0747170:CDS | 40.0% |
| GGATCATGAAACTCTCATTC+TGG | + | chr5_1:70820252-70820271 | None:intergenic | 40.0% | |
| TATTACCCAATGTCATCTGC+AGG | - | chr5_1:70820286-70820305 | Msa0747170:CDS | 40.0% | |
| GTTTACCTGCAGATGACATT+GGG | + | chr5_1:70820294-70820313 | None:intergenic | 40.0% | |
| TGTTTACCTGCAGATGACAT+TGG | + | chr5_1:70820295-70820314 | None:intergenic | 40.0% | |
| GAATTACTAAGACCGATGAG+AGG | + | chr5_1:70820408-70820427 | None:intergenic | 40.0% | |
| ! | TTGTTCTAGATGGTTACACC+TGG | - | chr5_1:70820703-70820722 | Msa0747170:CDS | 40.0% |
| TTTCGTTGTGTCAACGTTGT+TGG | - | chr5_1:70820756-70820775 | Msa0747170:intron | 40.0% | |
| ! | GTTGGCTTCTTTCAAGTGAT+AGG | - | chr5_1:70820774-70820793 | Msa0747170:intron | 40.0% |
| AAAAGAAATGCTCTGTCAGC+TGG | - | chr5_1:70820945-70820964 | Msa0747170:intron | 40.0% | |
| GACTGAATCAGGAAAAAGTG+AGG | - | chr5_1:70821004-70821023 | Msa0747170:intron | 40.0% | |
| ! | CAGATTTTCCTGAATGTTGC+TGG | + | chr5_1:70821430-70821449 | None:intergenic | 40.0% |
| TATATGCTATATCTGCGCCA+AGG | + | chr5_1:70821546-70821565 | None:intergenic | 40.0% | |
| ! | CTGGAAATGAGTCGGTATTT+TGG | + | chr5_1:70821594-70821613 | None:intergenic | 40.0% |
| !! | CAAAATACCGACTCATTTCC+AGG | - | chr5_1:70821592-70821611 | Msa0747170:intron | 40.0% |
| AAGGAATCCTGGAAATGAGT+CGG | + | chr5_1:70821602-70821621 | None:intergenic | 40.0% | |
| GGATAATGCACAATATGTGC+AGG | + | chr5_1:70822066-70822085 | None:intergenic | 40.0% | |
| GAGCTTAGCTCATTTGGTAT+GGG | + | chr5_1:70822087-70822106 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCATTTGGTA+TGG | + | chr5_1:70822088-70822107 | None:intergenic | 40.0% | |
| TACCAAATGAGCTAAGCTCA+TGG | - | chr5_1:70822088-70822107 | Msa0747170:intron | 40.0% | |
| ACCAAATGAGCTAAGCTCAT+GGG | - | chr5_1:70822089-70822108 | Msa0747170:intron | 40.0% | |
| ACATTCAGCAAGGAAACCTA+TGG | + | chr5_1:70822365-70822384 | None:intergenic | 40.0% | |
| TTAGCTCCTCATGTTGTGAA+TGG | - | chr5_1:70822447-70822466 | Msa0747170:intron | 40.0% | |
| TCACATCCATTCACAACATG+AGG | + | chr5_1:70822456-70822475 | None:intergenic | 40.0% | |
| ! | GTTTGATAGTTGAACTGCCA+TGG | - | chr5_1:70822505-70822524 | Msa0747170:intron | 40.0% |
| CTTATCCAAGGATGTAAGTG+AGG | - | chr5_1:70822540-70822559 | Msa0747170:intron | 40.0% | |
| AAGATCCTCACTTACATCCT+TGG | + | chr5_1:70822548-70822567 | None:intergenic | 40.0% | |
| ATGTGTCCGAATATCAGTCA+TGG | - | chr5_1:70822689-70822708 | Msa0747170:intron | 40.0% | |
| GAATATCAGTCATGGTCTCA+TGG | - | chr5_1:70822697-70822716 | Msa0747170:intron | 40.0% | |
| CGAACATATAGGTGTAGGAT+AGG | + | chr5_1:70823015-70823034 | None:intergenic | 40.0% | |
| TTCATCAGAAGAACGCTTTG+CGG | + | chr5_1:70823209-70823228 | None:intergenic | 40.0% | |
| AATTTCTTTGCCCAACTTGG+CGG | + | chr5_1:70823284-70823303 | None:intergenic | 40.0% | |
| AAGTGACCAGTTTCATCCTT+GGG | - | chr5_1:70823310-70823329 | Msa0747170:intron | 40.0% | |
| TCACAGTAATGAGGAGAAGG+AGG | - | chr5_1:70815556-70815575 | Msa0747170:three_prime_UTR | 45.0% | |
| AGTAATGAGGAGAAGGAGGT+TGG | - | chr5_1:70815560-70815579 | Msa0747170:three_prime_UTR | 45.0% | |
| GTAATGAGGAGAAGGAGGTT+GGG | - | chr5_1:70815561-70815580 | Msa0747170:three_prime_UTR | 45.0% | |
| GGTTGGGAACACCATAGTAT+TGG | - | chr5_1:70815577-70815596 | Msa0747170:three_prime_UTR | 45.0% | |
| TTCAGACCATAGAGAGGTGA+AGG | - | chr5_1:70815600-70815619 | Msa0747170:three_prime_UTR | 45.0% | |
| TCACTTCCTTCACCTCTCTA+TGG | + | chr5_1:70815609-70815628 | None:intergenic | 45.0% | |
| TGAAGGAAGTGAAACGACGA+AGG | - | chr5_1:70815617-70815636 | Msa0747170:three_prime_UTR | 45.0% | |
| TTGAGTATGAGCTTGACACG+TGG | + | chr5_1:70815748-70815767 | None:intergenic | 45.0% | |
| !! | GGAGAGAAAGGATTTTGGGT+GGG | + | chr5_1:70816069-70816088 | None:intergenic | 45.0% |
| ! | TGGAGAGAAAGGATTTTGGG+TGG | + | chr5_1:70816070-70816089 | None:intergenic | 45.0% |
| GACGAAAATACCCCTTCTGA+GGG | + | chr5_1:70816680-70816699 | None:intergenic | 45.0% | |
| TGACGAAAATACCCCTTCTG+AGG | + | chr5_1:70816681-70816700 | None:intergenic | 45.0% | |
| GAAAGGAGAGAAGAGAAGTG+AGG | + | chr5_1:70816859-70816878 | None:intergenic | 45.0% | |
| GCAACTCAGAAATCTGTCAC+TGG | + | chr5_1:70817481-70817500 | None:intergenic | 45.0% | |
| ACTAGAGTGGGAATTGGCAA+GGG | - | chr5_1:70817629-70817648 | Msa0747170:intron | 45.0% | |
| ! | CAACACCAAAGCGTTTGATG+AGG | - | chr5_1:70817964-70817983 | Msa0747170:intron | 45.0% |
| ATCACCCTCATCAAACGCTT+TGG | + | chr5_1:70817972-70817991 | None:intergenic | 45.0% | |
| ! | AAAGCGTTTGATGAGGGTGA+TGG | - | chr5_1:70817971-70817990 | Msa0747170:intron | 45.0% |
| AGATGTTCCAAAGTGAGTCC+TGG | + | chr5_1:70818002-70818021 | None:intergenic | 45.0% | |
| ATGTTTAGTGAATCCACGGG+TGG | - | chr5_1:70818301-70818320 | Msa0747170:intron | 45.0% | |
| CAAAGGAATATGGGGGTTGA+AGG | - | chr5_1:70818428-70818447 | Msa0747170:intron | 45.0% | |
| !!! | CCGGGTTGATCACAAGATTT+TGG | + | chr5_1:70818481-70818500 | None:intergenic | 45.0% |
| TATGGAATCAGCACCTTGTG+AGG | + | chr5_1:70818538-70818557 | None:intergenic | 45.0% | |
| AGAACATTGTTCCTGCAGCA+AGG | - | chr5_1:70818801-70818820 | Msa0747170:intron | 45.0% | |
| GAACATTGTTCCTGCAGCAA+GGG | - | chr5_1:70818802-70818821 | Msa0747170:intron | 45.0% | |
| TAGAGTTGTGCCCAAGGATT+TGG | - | chr5_1:70818895-70818914 | Msa0747170:intron | 45.0% | |
| AGGCATTCGAGGTTACTTGA+AGG | - | chr5_1:70819344-70819363 | Msa0747170:CDS | 45.0% | |
| GGCATTCGAGGTTACTTGAA+GGG | - | chr5_1:70819345-70819364 | Msa0747170:CDS | 45.0% | |
| CTTGAAGGGTAACGTACCAT+AGG | - | chr5_1:70819359-70819378 | Msa0747170:CDS | 45.0% | |
| TACGTAGCGATGCAAACCTA+TGG | + | chr5_1:70819378-70819397 | None:intergenic | 45.0% | |
| GGTTTGCATCGCTACGTATT+AGG | - | chr5_1:70819380-70819399 | Msa0747170:CDS | 45.0% | |
| TTCCTCTCTTACCATGCTCA+AGG | + | chr5_1:70819802-70819821 | None:intergenic | 45.0% | |
| AAAGAAGTTCACCATGCCTC+AGG | - | chr5_1:70819862-70819881 | Msa0747170:intron | 45.0% | |
| TTCACCATGCCTCAGGTTTA+TGG | - | chr5_1:70819869-70819888 | Msa0747170:intron | 45.0% | |
| !! | AGTTTTGATGCAACAGGCCT+CGG | + | chr5_1:70819999-70820018 | None:intergenic | 45.0% |
| !! | GCTGCAAGTTTTGATGCAAC+AGG | + | chr5_1:70820005-70820024 | None:intergenic | 45.0% |
| TACTCCTCTTCTTACTGGTC+AGG | - | chr5_1:70820028-70820047 | Msa0747170:CDS | 45.0% | |
| CTTACCTGACCAGTAAGAAG+AGG | + | chr5_1:70820035-70820054 | None:intergenic | 45.0% | |
| TAAGGCAATGCATGCAAGCT+AGG | + | chr5_1:70820083-70820102 | None:intergenic | 45.0% | |
| GGTGAACCAAGTGATAGTTC+TGG | - | chr5_1:70820159-70820178 | Msa0747170:intron | 45.0% | |
| TGAGCACACAGATTTGACAG+AGG | + | chr5_1:70820458-70820477 | None:intergenic | 45.0% | |
| TACACCTGGTAGCACAATTG+TGG | - | chr5_1:70820717-70820736 | Msa0747170:CDS | 45.0% | |
| TGAACCACAATTGTGCTACC+AGG | + | chr5_1:70820724-70820743 | None:intergenic | 45.0% | |
| GGAGATCTGCCAAGTTCATT+TGG | - | chr5_1:70821132-70821151 | Msa0747170:intron | 45.0% | |
| !! | GCAAGATATTTTTGCGGCCT+TGG | - | chr5_1:70821526-70821545 | Msa0747170:CDS | 45.0% |
| TGTGCAATCACTGCAACAAC+AGG | - | chr5_1:70821735-70821754 | Msa0747170:intron | 45.0% | |
| ATCACTGCAACAACAGGTTG+AGG | - | chr5_1:70821741-70821760 | Msa0747170:intron | 45.0% | |
| GTGCACATGCTTAACACCAA+CGG | - | chr5_1:70821844-70821863 | Msa0747170:intron | 45.0% | |
| ! | AGATGAATATGTGGGGTGTC+CGG | - | chr5_1:70822024-70822043 | Msa0747170:intron | 45.0% |
| CCAAATGAGCTAAGCTCATG+GGG | - | chr5_1:70822090-70822109 | Msa0747170:intron | 45.0% | |
| ATGAGAATGTGAATCGCCCT+AGG | + | chr5_1:70822177-70822196 | None:intergenic | 45.0% | |
| TCAGCAAGGAAACCTATGGA+AGG | + | chr5_1:70822361-70822380 | None:intergenic | 45.0% | |
| ! | TGGATCTTCTCATCGACTGT+TGG | - | chr5_1:70822717-70822736 | Msa0747170:intron | 45.0% |
| TCATCAGAAGAACGCTTTGC+GGG | + | chr5_1:70823208-70823227 | None:intergenic | 45.0% | |
| ! | ACAGTTTTCTTCCGCCAAGT+TGG | - | chr5_1:70823270-70823289 | Msa0747170:intron | 45.0% |
| ! | CAGTTTTCTTCCGCCAAGTT+GGG | - | chr5_1:70823271-70823290 | Msa0747170:intron | 45.0% |
| GAAGTGACCAGTTTCATCCT+TGG | - | chr5_1:70823309-70823328 | Msa0747170:intron | 45.0% | |
| !!! | TATATATTTTTTAAATTAGT+AGG | + | chr5_1:70816507-70816526 | None:intergenic | 5.0% |
| !! | AAAAAAAAAACAAAATATAA+TGG | + | chr5_1:70821976-70821995 | None:intergenic | 5.0% |
| GCATGGTGCAGCAGAGAAAT+GGG | + | chr5_1:70815816-70815835 | None:intergenic | 50.0% | |
| TGCATGGTGCAGCAGAGAAA+TGG | + | chr5_1:70815817-70815836 | None:intergenic | 50.0% | |
| GCCGTGTTTGAGAAGAGAGA+AGG | + | chr5_1:70816837-70816856 | None:intergenic | 50.0% | |
| TGTGTAGGTATGAAGAGGGC+TGG | - | chr5_1:70817148-70817167 | Msa0747170:intron | 50.0% | |
| AGGAGAGAGGACACTAGAGT+GGG | - | chr5_1:70817617-70817636 | Msa0747170:intron | 50.0% | |
| GAGGACACTAGAGTGGGAAT+TGG | - | chr5_1:70817623-70817642 | Msa0747170:intron | 50.0% | |
| CACTAGAGTGGGAATTGGCA+AGG | - | chr5_1:70817628-70817647 | Msa0747170:intron | 50.0% | |
| !! | ATGAGGGTGATGGAGATTCC+AGG | - | chr5_1:70817981-70818000 | Msa0747170:intron | 50.0% |
| GGAGATTCCAGGACTCACTT+TGG | - | chr5_1:70817992-70818011 | Msa0747170:intron | 50.0% | |
| !! | TACAACAAAGGTACCACCCG+TGG | + | chr5_1:70818317-70818336 | None:intergenic | 50.0% |
| CATTAGCACCAAGATCTGCC+GGG | + | chr5_1:70818499-70818518 | None:intergenic | 50.0% | |
| GCATTAGCACCAAGATCTGC+CGG | + | chr5_1:70818500-70818519 | None:intergenic | 50.0% | |
| ATGTCACCAAACGCCTCACA+AGG | - | chr5_1:70818522-70818541 | Msa0747170:intron | 50.0% | |
| TTGTTGCAGGGCTCAGTTAG+AGG | - | chr5_1:70818634-70818653 | Msa0747170:intron | 50.0% | |
| TACCTTGTTCTTCTCGGCTG+CGG | + | chr5_1:70818672-70818691 | None:intergenic | 50.0% | |
| TGCTTGTAGAGTTGTGCCCA+AGG | - | chr5_1:70818889-70818908 | Msa0747170:intron | 50.0% | |
| !! | GGGAATGAAGAAGGCATTCG+AGG | - | chr5_1:70819333-70819352 | Msa0747170:CDS | 50.0% |
| CAAGTCTTCCCACAACAGAG+AGG | + | chr5_1:70819554-70819573 | None:intergenic | 50.0% | |
| ! | TTTCTTGGTGGCCTTGAGCA+TGG | - | chr5_1:70819788-70819807 | Msa0747170:intron | 50.0% |
| GCCGATACTCCTCTTCTTAC+TGG | - | chr5_1:70820023-70820042 | Msa0747170:CDS | 50.0% | |
| GGTTGTGTCTTTCACTTGGC+AGG | - | chr5_1:70820180-70820199 | Msa0747170:CDS | 50.0% | |
| AGCTCAGTCAGGTATGTGAC+TGG | + | chr5_1:70821341-70821360 | None:intergenic | 50.0% | |
| CAATGAGTGGAAGCTCAGTC+AGG | + | chr5_1:70821352-70821371 | None:intergenic | 50.0% | |
| GCATGTGCACAGTGCAAAAC+AGG | + | chr5_1:70821834-70821853 | None:intergenic | 50.0% | |
| ! | GATGAATATGTGGGGTGTCC+GGG | - | chr5_1:70822025-70822044 | Msa0747170:intron | 50.0% |
| ! | ATGAATATGTGGGGTGTCCG+GGG | - | chr5_1:70822026-70822045 | Msa0747170:intron | 50.0% |
| CCCCATGAGCTTAGCTCATT+TGG | + | chr5_1:70822093-70822112 | None:intergenic | 50.0% | |
| TTCTCAACCCTCAACCTCCT+AGG | - | chr5_1:70822157-70822176 | Msa0747170:intron | 50.0% | |
| TCTCAACCCTCAACCTCCTA+GGG | - | chr5_1:70822158-70822177 | Msa0747170:intron | 50.0% | |
| AGAATGTGAATCGCCCTAGG+AGG | + | chr5_1:70822174-70822193 | None:intergenic | 50.0% | |
| TGGCGGAAGAAAACTGTGTC+AGG | + | chr5_1:70823267-70823286 | None:intergenic | 50.0% | |
| !!! | AGCCATGGCTGCTTTTGGTT+AGG | - | chr5_1:70823429-70823448 | Msa0747170:intron | 50.0% |
| CACCTAACCAAAAGCAGCCA+TGG | + | chr5_1:70823434-70823453 | None:intergenic | 50.0% | |
| GAGGAGAGAGGACACTAGAG+TGG | - | chr5_1:70817616-70817635 | Msa0747170:intron | 55.0% | |
| GTGATCAACCCGGCAGATCT+TGG | - | chr5_1:70818488-70818507 | Msa0747170:intron | 55.0% | |
| ! | TCAGCACCTTGTGAGGCGTT+TGG | + | chr5_1:70818531-70818550 | None:intergenic | 55.0% |
| CATTGTTCCTGCAGCAAGGG+TGG | - | chr5_1:70818805-70818824 | Msa0747170:intron | 55.0% | |
| GGCCTTGAGCATGGTAAGAG+AGG | - | chr5_1:70819797-70819816 | Msa0747170:intron | 55.0% | |
| GTGGCCATAAACCTGAGGCA+TGG | + | chr5_1:70819876-70819895 | None:intergenic | 55.0% | |
| AAGGGGTGGCCATAAACCTG+AGG | + | chr5_1:70819881-70819900 | None:intergenic | 55.0% | |
| TGCACAATATGTGCAGGGGC+CGG | + | chr5_1:70822060-70822079 | None:intergenic | 55.0% | |
| GAATCGCCCTAGGAGGTTGA+GGG | + | chr5_1:70822167-70822186 | None:intergenic | 55.0% | |
| TGAATCGCCCTAGGAGGTTG+AGG | + | chr5_1:70822168-70822187 | None:intergenic | 55.0% | |
| TGAACTGCCATGGACCAGAG+CGG | - | chr5_1:70822515-70822534 | Msa0747170:intron | 55.0% | |
| ATAAGAGCCGCTCTGGTCCA+TGG | + | chr5_1:70822525-70822544 | None:intergenic | 55.0% | |
| ACCAGAGCGGCTCTTATCCA+AGG | - | chr5_1:70822528-70822547 | Msa0747170:intron | 55.0% | |
| TCCTTGGATAAGAGCCGCTC+TGG | + | chr5_1:70822532-70822551 | None:intergenic | 55.0% | |
| !! | GCATCAGCCATGGCTGCTTT+TGG | - | chr5_1:70823424-70823443 | Msa0747170:intron | 55.0% |
| AGCCGCAGCCGAGAAGAACA+AGG | - | chr5_1:70818667-70818686 | Msa0747170:intron | 60.0% | |
| GCATGTTCCACCCTTGCTGC+AGG | + | chr5_1:70818815-70818834 | None:intergenic | 60.0% | |
| ! | GTTGGCCTGTACGTACACCG+AGG | - | chr5_1:70819979-70819998 | Msa0747170:intron | 60.0% |
| ! | ACAGGCCTCGGTGTACGTAC+AGG | + | chr5_1:70819987-70820006 | None:intergenic | 60.0% |
| CACAATATGTGCAGGGGCCG+GGG | + | chr5_1:70822058-70822077 | None:intergenic | 60.0% | |
| GCACAATATGTGCAGGGGCC+GGG | + | chr5_1:70822059-70822078 | None:intergenic | 60.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr5_1:70822038-70822057 | Msa0747170:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr5_1:70822046-70822065 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 70815545 | 70823633 | 70815545 | ID=Msa0747170;Name=Msa0747170 |
| chr5_1 | mRNA | 70815545 | 70823633 | 70815545 | ID=Msa0747170-mRNA-1;Parent=Msa0747170;Name=Msa0747170-mRNA-1;_AED=0.30;_eAED=0.31;_QI=0|0.53|0.64|0.92|0.76|0.78|14|560|336 |
| chr5_1 | exon | 70815545 | 70815988 | 70815545 | ID=Msa0747170-mRNA-1:exon:20929;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70816626 | 70816810 | 70816626 | ID=Msa0747170-mRNA-1:exon:20928;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70817416 | 70817484 | 70817416 | ID=Msa0747170-mRNA-1:exon:20927;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70819129 | 70819200 | 70819129 | ID=Msa0747170-mRNA-1:exon:20926;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70819295 | 70819423 | 70819295 | ID=Msa0747170-mRNA-1:exon:20925;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70819807 | 70819860 | 70819807 | ID=Msa0747170-mRNA-1:exon:20924;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70819992 | 70820078 | 70819992 | ID=Msa0747170-mRNA-1:exon:20923;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70820172 | 70820375 | 70820172 | ID=Msa0747170-mRNA-1:exon:20922;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70820490 | 70820535 | 70820490 | ID=Msa0747170-mRNA-1:exon:20921;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70820635 | 70820756 | 70820635 | ID=Msa0747170-mRNA-1:exon:20920;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70821141 | 70821217 | 70821141 | ID=Msa0747170-mRNA-1:exon:20919;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70821494 | 70821562 | 70821494 | ID=Msa0747170-mRNA-1:exon:20918;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70821920 | 70821926 | 70821920 | ID=Msa0747170-mRNA-1:exon:20917;Parent=Msa0747170-mRNA-1 |
| chr5_1 | exon | 70823628 | 70823633 | 70823628 | ID=Msa0747170-mRNA-1:exon:20916;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70823628 | 70823633 | 70823628 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70821920 | 70821926 | 70821920 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70821494 | 70821562 | 70821494 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70821141 | 70821217 | 70821141 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70820635 | 70820756 | 70820635 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70820490 | 70820535 | 70820490 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70820172 | 70820375 | 70820172 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70819992 | 70820078 | 70819992 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70819807 | 70819860 | 70819807 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70819295 | 70819423 | 70819295 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70819129 | 70819200 | 70819129 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70817416 | 70817484 | 70817416 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | CDS | 70816742 | 70816810 | 70816742 | ID=Msa0747170-mRNA-1:cds;Parent=Msa0747170-mRNA-1 |
| chr5_1 | three_prime_UTR | 70816626 | 70816741 | 70816626 | ID=Msa0747170-mRNA-1:three_prime_utr;Parent=Msa0747170-mRNA-1 |
| chr5_1 | three_prime_UTR | 70815545 | 70815988 | 70815545 | ID=Msa0747170-mRNA-1:three_prime_utr;Parent=Msa0747170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
