AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706090 MtrunA17_Chr8g0385211 96.186 708 16 1 1 708 1 697 0.0 1394
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706090 AT5G08630.1 50.201 745 312 11 1 708 1 723 0.0 682
Msa0706090 AT5G08630.3 50.201 745 312 11 1 708 1 723 0.0 682
Msa0706090 AT5G08630.2 50.201 745 312 11 1 708 1 723 0.0 682

Find 215 sgRNAs with CRISPR-Local

Find 1058 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTGATGGATCCTTTC+TGG 0.107207 4_4:+78987244 None:intergenic
TTAGAGTATTTCTACTAAAA+AGG 0.140867 4_4:+78990154 None:intergenic
GCAGGAGTCATGAATTCTTT+TGG 0.251563 4_4:+78991755 None:intergenic
AATAATCACATTAAACAAAA+TGG 0.272373 4_4:-78987559 Msa0706090:CDS
AGGAACTTGGGGCCTCTAAA+AGG 0.283127 4_4:-78987690 Msa0706090:CDS
TTCAGATAACAATGGTTAAC+TGG 0.293549 4_4:-78987906 Msa0706090:intron
TTGTGTAGGGAATCTCTTAA+TGG 0.296835 4_4:-78988312 Msa0706090:CDS
CGCTTGTACATCATCCAAAA+TGG 0.301194 4_4:+78986030 None:intergenic
CTGAAAGAACCAGCAGAAAA+TGG 0.315447 4_4:-78987278 Msa0706090:CDS
CCTAATGGGCTTCTACTAAT+AGG 0.323172 4_4:+78987092 None:intergenic
AAGACAATTCACTGGGTAAA+AGG 0.324894 4_4:-78987492 Msa0706090:intron
AATAGAAACATAAGCAAATC+AGG 0.326206 4_4:+78985743 None:intergenic
ATGGGAATGGCCATGGGAGC+CGG 0.328171 4_4:-78985696 Msa0706090:three_prime_UTR
GATTTGCTTATGTTTCTATT+AGG 0.333932 4_4:-78985740 Msa0706090:three_prime_UTR
AGTTGTCAAACTCAAGTATA+TGG 0.334020 4_4:-78985668 Msa0706090:three_prime_UTR
TACATTCAGGCCATGGGAGC+CGG 0.334175 4_4:-78985635 Msa0706090:three_prime_UTR
AGGGAATCTCTTAATGGTTT+GGG 0.335374 4_4:-78988306 Msa0706090:CDS
TAGTCTCGGTCTTTACCTAA+TGG 0.344955 4_4:+78987077 None:intergenic
CCCTGAAAATTGCAGTTTCA+AGG 0.346144 4_4:+78987743 None:intergenic
GGTATTTATCGGCTCCTTCA+TGG 0.350508 4_4:+78990262 None:intergenic
ATCTATACCGCCAGAGGGTT+TGG 0.350587 4_4:-78991865 Msa0706090:CDS
TCTGCTGGTTCTTTCAGCTC+TGG 0.357652 4_4:+78987284 None:intergenic
AAAACAATTATCGTAGTATA+TGG 0.357958 4_4:-78986822 Msa0706090:intron
TGGGAATGGCCATGGGAGCC+GGG 0.359628 4_4:-78985695 Msa0706090:three_prime_UTR
TAGGGAATCTCTTAATGGTT+TGG 0.359730 4_4:-78988307 Msa0706090:CDS
ATAATCGCTAATTTGTGTTA+AGG 0.365021 4_4:+78991901 None:intergenic
GTTCTTTCAGCTCTGGATCC+AGG 0.367177 4_4:+78987291 None:intergenic
TCGTAGAAAAGCAGAGGATA+TGG 0.369713 4_4:-78991932 Msa0706090:intron
AGTCTCGGTCTTTACCTAAT+GGG 0.370559 4_4:+78987078 None:intergenic
TGGAAGAATTTGCTACATTC+AGG 0.372689 4_4:-78985648 Msa0706090:three_prime_UTR
AGAAGTCCATGCAGAAGATT+TGG 0.375284 4_4:-78990190 Msa0706090:CDS
AAGGAGAAAGCCTTTGGCTT+TGG 0.379570 4_4:-78992210 Msa0706090:CDS
TCCACTTGTTAACATATTTG+AGG 0.381698 4_4:+78986128 None:intergenic
ACACTTGTCGCCGTACTCTT+TGG 0.383626 4_4:-78988255 Msa0706090:CDS
ATATCCCATTGATGATCTAT+TGG 0.390572 4_4:-78988408 Msa0706090:CDS
TGTGATGCGCATTGATTGTT+TGG 0.391789 4_4:-78985836 Msa0706090:three_prime_UTR
CCTATTAGTAGAAGCCCATT+AGG 0.393334 4_4:-78987092 Msa0706090:CDS
TGCAGGTATGCTCCCTTTGA+AGG 0.403392 4_4:-78990394 Msa0706090:intron
ATTGAACAGCGGCAGGAACT+TGG 0.404109 4_4:-78987703 Msa0706090:CDS
CATGTGGGGAAGAAAATAAA+TGG 0.406416 4_4:-78987535 Msa0706090:CDS
ACATTCAGGCCATGGGAGCC+GGG 0.407376 4_4:-78985634 Msa0706090:three_prime_UTR
GGAACATTAAAGTCTCTTGA+TGG 0.407958 4_4:+78988341 None:intergenic
GAAGGACGATCAGTGAAAAC+AGG 0.410514 4_4:+78988365 None:intergenic
CTCCCTCCCCTCCTTCGCTA+TGG 0.416431 4_4:+78993267 None:intergenic
TTTGTTGGTGCGGAATTGTA+TGG 0.422417 4_4:-78990330 Msa0706090:CDS
GAACCGCATTCCCATCCTTA+TGG 0.425234 4_4:+78988210 None:intergenic
TGATCAATATTCCTCAATTA+CGG 0.425945 4_4:-78987855 Msa0706090:CDS
TGAAAATGCAATCTGCCATA+AGG 0.432122 4_4:-78988225 Msa0706090:CDS
TTATAATTTGCTCCAAGAAA+AGG 0.434059 4_4:-78990002 Msa0706090:CDS
TACCTCATAACGGTATTTAT+CGG 0.434201 4_4:+78990251 None:intergenic
TCAGTGAAAACAGGGTCATC+TGG 0.436755 4_4:+78988374 None:intergenic
CAACTATGCCCCGGCTCCCA+TGG 0.438098 4_4:+78985625 None:intergenic
CTTCACCAATAGATCATCAA+TGG 0.438495 4_4:+78988403 None:intergenic
ACTTGGTAAACATGCTCATC+TGG 0.439545 4_4:+78992164 None:intergenic
GGGAAGCTACAATATGAGTA+TGG 0.441691 4_4:-78985777 Msa0706090:three_prime_UTR
AGGCATCGAAGAATCTCATT+AGG 0.444111 4_4:-78985720 Msa0706090:three_prime_UTR
ATACTCTAAAGGCTTTCATC+CGG 0.454376 4_4:-78990140 Msa0706090:CDS
TACCTATCGAAATGCCCCTT+GGG 0.456446 4_4:-78990112 Msa0706090:CDS
CTATGAAGGAACCATAAAAC+GGG 0.456689 4_4:-78987830 Msa0706090:CDS
ATTGCAAGGGTGAGCGGGAA+AGG 0.457819 4_4:-78986864 Msa0706090:CDS
TTGAACAGCGGCAGGAACTT+GGG 0.459272 4_4:-78987702 Msa0706090:CDS
CTTGCACCATTCTTCAATCA+TGG 0.459834 4_4:-78985976 Msa0706090:three_prime_UTR
TCACAACCACAATATTGAAA+AGG 0.466513 4_4:+78985860 None:intergenic
GCTGTAGTATCCCCACTCCT+TGG 0.470462 4_4:+78986998 None:intergenic
TTGCAGGAGCGTTTGTTTGT+TGG 0.471705 4_4:-78990345 Msa0706090:CDS
TAAACATAAAAGAAAGAAGT+TGG 0.472658 4_4:-78988877 Msa0706090:CDS
CGAAGAATCTCATTAGGAAT+GGG 0.476161 4_4:-78985714 Msa0706090:three_prime_UTR
ACCTTTCCTCTTAACTCCTC+AGG 0.479963 4_4:+78990042 None:intergenic
TCCCTCCCCTCCTTCGCTAT+GGG 0.480621 4_4:+78993268 None:intergenic
GTGATAGCTTGATGCATTGA+TGG 0.480731 4_4:-78986896 Msa0706090:intron
TCAAAATCTTCCAAAGAGTA+CGG 0.481765 4_4:+78988245 None:intergenic
ACTATGAAGGAACCATAAAA+CGG 0.481937 4_4:-78987831 Msa0706090:CDS
GAAGATTAACAATGGAAGCT+TGG 0.482147 4_4:-78986103 Msa0706090:exon
TAAGATTTCTAGTTTAGCAT+TGG 0.483800 4_4:+78987786 None:intergenic
CAACTATGCCCCGGCTCCCA+TGG 0.485279 4_4:+78985686 None:intergenic
CCTTCATAGTGCCGTAATTG+AGG 0.488180 4_4:+78987844 None:intergenic
CCAGAGGGTTTGGTCATGTA+AGG 0.490194 4_4:-78991855 Msa0706090:CDS
ATGTTCCAATGCATTGTGTA+GGG 0.490919 4_4:-78988325 Msa0706090:CDS
TGAGTTTATTGAACAGCGGC+AGG 0.492835 4_4:-78987710 Msa0706090:CDS
AGAAGGTGCGTGTGCGTCGT+GGG 0.493347 4_4:-78993294 Msa0706090:five_prime_UTR
GAGAAGGTGCGTGTGCGTCG+TGG 0.493677 4_4:-78993295 Msa0706090:five_prime_UTR
GTAAAGACCGAGACTACAAT+AGG 0.494001 4_4:-78987070 Msa0706090:CDS
GACAAACTGGCACAAAATCA+TGG 0.495015 4_4:-78990081 Msa0706090:CDS
ATGGAGAGATAGAATCATCT+AGG 0.496560 4_4:-78987516 Msa0706090:CDS
TTTCTACCATGATTGAAGAA+TGG 0.497317 4_4:+78985970 None:intergenic
GGGAATGGCCATGGGAGCCG+GGG 0.497809 4_4:-78985694 Msa0706090:three_prime_UTR
CCTGAAAATTGCAGTTTCAA+GGG 0.498613 4_4:+78987744 None:intergenic
TCATCTGGCTTCAAATCCTC+AGG 0.502064 4_4:+78992179 None:intergenic
TTGCAAGGGTGAGCGGGAAA+GGG 0.502818 4_4:-78986863 Msa0706090:CDS
AACGTGAGAAAGTTCTCTCT+CGG 0.502970 4_4:-78993241 Msa0706090:five_prime_UTR
TACTCTAAAGGCTTTCATCC+GGG 0.503800 4_4:-78990139 Msa0706090:CDS
TCCTCAAATATGTTAACAAG+TGG 0.504252 4_4:-78986129 Msa0706090:CDS
GGTGCATGTCTCTGTCTGAC+AGG 0.505115 4_4:-78992262 Msa0706090:intron
GGAACTTGGGGCCTCTAAAA+GGG 0.507903 4_4:-78987689 Msa0706090:CDS
ATTAAACAAAATGGACATGT+GGG 0.508941 4_4:-78987550 Msa0706090:CDS
TATTGGTGGTTCCGTCGCGA+TGG 0.509839 4_4:-78987047 Msa0706090:CDS
AAAGGCTTTCTCCTTAAAAG+AGG 0.511177 4_4:+78992218 None:intergenic
ACTAGAAATCTTATGTGAGT+TGG 0.511639 4_4:-78987776 Msa0706090:CDS
ACCGAGACTACAATAGGTAT+TGG 0.512131 4_4:-78987064 Msa0706090:CDS
GGCTTTGGCTGAGCCTCCTG+AGG 0.513105 4_4:-78992195 Msa0706090:CDS
AATGTTCCAATGCATTGTGT+AGG 0.514690 4_4:-78988326 Msa0706090:CDS
CTACCTATCGAAATGCCCCT+TGG 0.515270 4_4:-78990113 Msa0706090:CDS
ATTAGGAATGGGAATGGCCA+TGG 0.515934 4_4:-78985703 Msa0706090:three_prime_UTR
TCTATACTATTCTTCTCTGA+TGG 0.516611 4_4:+78987233 None:intergenic
ACCAATACCTATTGTAGTCT+CGG 0.518556 4_4:+78987063 None:intergenic
CATAAAAGAAAGAAGTTGGA+CGG 0.520584 4_4:-78988873 Msa0706090:CDS
ATGACGAGTCTGTGCTTCGA+AGG 0.520616 4_4:-78986198 Msa0706090:CDS
AATACCGTTATGAGGTAGCT+TGG 0.521287 4_4:-78990245 Msa0706090:CDS
TCGAAGAATCTCATTAGGAA+TGG 0.523051 4_4:-78985715 Msa0706090:three_prime_UTR
AATGGTTCTGCACAAGAGAA+AGG 0.524537 4_4:-78988840 Msa0706090:intron
AAGCTGACTCAGAAAGCAAT+GGG 0.525222 4_4:-78987615 Msa0706090:CDS
GCTGAATTGCAAGGGTGAGC+GGG 0.525450 4_4:-78986869 Msa0706090:CDS
CATTTCGATAGGTAGATTCC+CGG 0.525618 4_4:+78990121 None:intergenic
AAAACAGGGTCATCTGGACT+AGG 0.526194 4_4:+78988380 None:intergenic
GAATCGGCAAGCTCCTTCAA+AGG 0.526421 4_4:+78990381 None:intergenic
CCTCAATTACGGCACTATGA+AGG 0.526729 4_4:-78987844 Msa0706090:CDS
AATTTGCTACATTCAGGCCA+TGG 0.527606 4_4:-78985642 Msa0706090:three_prime_UTR
GGTGGTTCCGTCGCGATGGG+AGG 0.530125 4_4:-78987043 Msa0706090:CDS
TGTAGTGGAGACCCTTCGAC+TGG 0.530760 4_4:-78985799 Msa0706090:three_prime_UTR
GTTTAGCATTGGCATCTACA+AGG 0.531441 4_4:+78987797 None:intergenic
ATCTAGGCAAGACAATTCAC+TGG 0.533178 4_4:-78987500 Msa0706090:CDS
GTTTGGTCATGTAAGGTCAC+TGG 0.533479 4_4:-78991848 Msa0706090:CDS
ATTGGTGGTTCCGTCGCGAT+GGG 0.534850 4_4:-78987046 Msa0706090:CDS
TTCACCAATAGATCATCAAT+GGG 0.536238 4_4:+78988404 None:intergenic
AGAATACTTTGAACGAGAGA+TGG 0.537615 4_4:-78987123 Msa0706090:CDS
AGCCGATAAATACCGTTATG+AGG 0.538299 4_4:-78990253 Msa0706090:CDS
CCTTACATGACCAAACCCTC+TGG 0.539626 4_4:+78991855 None:intergenic
CGAGTTCTTATCAAAGATGA+CGG 0.542545 4_4:-78988158 Msa0706090:CDS
TGGAAAAGAATTATCCAGAA+AGG 0.543257 4_4:-78987258 Msa0706090:CDS
TTCCCATAGCGAAGGAGGGG+AGG 0.544260 4_4:-78993270 Msa0706090:five_prime_UTR
TCCTGAGGAGTTAAGAGGAA+AGG 0.544829 4_4:-78990043 Msa0706090:CDS
CGCTGAATTGCAAGGGTGAG+CGG 0.545656 4_4:-78986870 Msa0706090:CDS
AAGCTGTGACTCCAAGGAGT+GGG 0.547750 4_4:-78987009 Msa0706090:CDS
CATTAAACAAAATGGACATG+TGG 0.548399 4_4:-78987551 Msa0706090:CDS
ACGTGAGAAAGTTCTCTCTC+GGG 0.549723 4_4:-78993240 Msa0706090:five_prime_UTR
TACTGAATGATCTTTAAAGC+AGG 0.550463 4_4:+78991737 None:intergenic
AACATATTTGAGGAAAGCAC+TGG 0.552278 4_4:+78986138 None:intergenic
ATACTACAGCAGCAAGGAAG+AGG 0.554283 4_4:-78986985 Msa0706090:intron
CATTCAGGCCATGGGAGCCG+GGG 0.554874 4_4:-78985633 None:intergenic
ATAGAAACATAAGCAAATCA+GGG 0.555379 4_4:+78985744 None:intergenic
GAAGAATAGTATAGAGCAGA+GGG 0.559232 4_4:-78987225 Msa0706090:intron
TCCCATAGCGAAGGAGGGGA+GGG 0.559790 4_4:-78993269 Msa0706090:five_prime_UTR
AGATTCCCTACACAATGCAT+TGG 0.560023 4_4:+78988320 None:intergenic
TAGAAACATAAGCAAATCAG+GGG 0.560945 4_4:+78985745 None:intergenic
AGGGAACAAGCACTAGAAGA+AGG 0.564376 4_4:-78987670 Msa0706090:CDS
TCATCAATGGGATATTTGAC+TGG 0.564513 4_4:+78988416 None:intergenic
GTTGTGTGCTGATATTGTAG+TGG 0.564961 4_4:-78985814 Msa0706090:three_prime_UTR
TGAACAGCGGCAGGAACTTG+GGG 0.565350 4_4:-78987701 Msa0706090:CDS
TGTTGAAAGCTGTGACTCCA+AGG 0.565461 4_4:-78987015 Msa0706090:CDS
AATCGGCAAGCTCCTTCAAA+GGG 0.566027 4_4:+78990382 None:intergenic
TTGTTGGTGCGGAATTGTAT+GGG 0.566354 4_4:-78990329 Msa0706090:CDS
AATGCAATCTGCCATAAGGA+TGG 0.567728 4_4:-78988221 Msa0706090:CDS
ACAGAAACGAAGTGTGAAGA+AGG 0.568103 4_4:-78988117 Msa0706090:intron
ATTGTAGCTTCCCCAGTCGA+AGG 0.568977 4_4:+78985787 None:intergenic
TATTTGAGGAAAGCACTGGC+AGG 0.571825 4_4:+78986142 None:intergenic
GGAGGCTCAGCCAAAGCCAA+AGG 0.571923 4_4:+78992200 None:intergenic
TGGGTTTCCCATAGCGAAGG+AGG 0.572110 4_4:-78993275 Msa0706090:five_prime_UTR
GATGGGTTCGCTGAATTGCA+AGG 0.572638 4_4:-78986878 Msa0706090:CDS
TGAGTTTGACAACTATGCCC+CGG 0.576198 4_4:+78985677 None:intergenic
ATAAAAGAAAGAAGTTGGAC+GGG 0.577666 4_4:-78988872 Msa0706090:CDS
TCTGCACCAAATCTTCTGCA+TGG 0.577710 4_4:+78990184 None:intergenic
AAAGCTGACTCAGAAAGCAA+TGG 0.580758 4_4:-78987616 Msa0706090:CDS
ATTTGCTACATTCAGGCCAT+GGG 0.581130 4_4:-78985641 Msa0706090:three_prime_UTR
GATGTTCCTGAGGAGTTAAG+AGG 0.585158 4_4:-78990048 Msa0706090:CDS
TTAAAGTCTCTTGATGGAGA+AGG 0.586141 4_4:+78988347 None:intergenic
GTAGTGGAGACCCTTCGACT+GGG 0.587447 4_4:-78985798 Msa0706090:three_prime_UTR
AACTGGCTTGACTTATGAAG+AGG 0.587923 4_4:-78991822 Msa0706090:CDS
GGTTTCCCATAGCGAAGGAG+GGG 0.588089 4_4:-78993273 Msa0706090:five_prime_UTR
ATGCAATCTGCCATAAGGAT+GGG 0.588555 4_4:-78988220 Msa0706090:CDS
TGATAGCTTGATGCATTGAT+GGG 0.592407 4_4:-78986895 Msa0706090:intron
TTAGGAATGGGAATGGCCAT+GGG 0.592484 4_4:-78985702 Msa0706090:three_prime_UTR
AGTTTGTCATGTAAAACCCA+AGG 0.592962 4_4:+78990096 None:intergenic
CTCCAAGAAAAGGAATAATG+AGG 0.596054 4_4:-78989992 Msa0706090:intron
GGGTTTCCCATAGCGAAGGA+GGG 0.597278 4_4:-78993274 Msa0706090:five_prime_UTR
CGAACCAAGCTACCTCATAA+CGG 0.598769 4_4:+78990241 None:intergenic
TCGTGTTCGAGCTCCACCTA+GGG 0.599113 4_4:-78986170 Msa0706090:CDS
AATCTCATTAGGAATGGGAA+TGG 0.604840 4_4:-78985709 Msa0706090:three_prime_UTR
AACCCAAGGGGCATTTCGAT+AGG 0.607105 4_4:+78990110 None:intergenic
GGAGCGTTTGTTTGTTGGTG+CGG 0.607787 4_4:-78990340 Msa0706090:CDS
TCGTGGGTTTCCCATAGCGA+AGG 0.609552 4_4:-78993278 Msa0706090:five_prime_UTR
GAGACTACAATAGGTATTGG+TGG 0.613718 4_4:-78987061 Msa0706090:CDS
TTGTAGCTTCCCCAGTCGAA+GGG 0.618968 4_4:+78985788 None:intergenic
AGAAGAATAGTATAGAGCAG+AGG 0.620057 4_4:-78987226 Msa0706090:CDS
AGTGGAAAGAAGATTAACAA+TGG 0.620868 4_4:-78986111 Msa0706090:exon
AGAACTGCAGAAAAGATCAA+AGG 0.621791 4_4:-78986242 Msa0706090:CDS
AAAGCTGTGACTCCAAGGAG+TGG 0.624462 4_4:-78987010 Msa0706090:CDS
CTCGTGTTCGAGCTCCACCT+AGG 0.625716 4_4:-78986171 Msa0706090:CDS
TCTTAACTCCTCAGGAACAT+CGG 0.628787 4_4:+78990050 None:intergenic
ATATTAAAAGTCATCCATGA+AGG 0.629139 4_4:-78990276 Msa0706090:CDS
TCCAGAACATGAAGAACACA+AGG 0.629982 4_4:-78988444 Msa0706090:intron
GTTTGTCATGTAAAACCCAA+GGG 0.631504 4_4:+78990097 None:intergenic
TTGGACGGGACACTAGTCAA+TGG 0.632342 4_4:-78988858 Msa0706090:CDS
TTTGAATCTATACCGCCAGA+GGG 0.635243 4_4:-78991870 Msa0706090:CDS
TAGTGGAGACCCTTCGACTG+GGG 0.635538 4_4:-78985797 Msa0706090:three_prime_UTR
CTGCCATAAGGATGGGAATG+CGG 0.638650 4_4:-78988213 Msa0706090:CDS
AGCTGTGACTCCAAGGAGTG+GGG 0.641289 4_4:-78987008 Msa0706090:CDS
TACATGACCAAACCCTCTGG+CGG 0.644810 4_4:+78991858 None:intergenic
TCTGGCTTCAAATCCTCAGG+AGG 0.644827 4_4:+78992182 None:intergenic
AGCAATGGGAATCATCTCAA+CGG 0.650870 4_4:-78987601 Msa0706090:CDS
TAACTCCTCAGGAACATCGG+TGG 0.650954 4_4:+78990053 None:intergenic
CAAATATCCTCCCATCGCGA+CGG 0.651308 4_4:+78987036 None:intergenic
AGAAAAGCAGAGGATATGGA+TGG 0.653046 4_4:-78991928 Msa0706090:intron
GTGGGGATACTACAGCAGCA+AGG 0.659358 4_4:-78986991 Msa0706090:CDS
GTTTGAATCTATACCGCCAG+AGG 0.661345 4_4:-78991871 Msa0706090:CDS
ATGGGTTCGCTGAATTGCAA+GGG 0.662156 4_4:-78986877 Msa0706090:CDS
TATCTCCACCGATGTTCCTG+AGG 0.662162 4_4:-78990058 Msa0706090:CDS
TCTAGGCAAGACAATTCACT+GGG 0.669591 4_4:-78987499 Msa0706090:CDS
TGGATGAGTTTATTGAACAG+CGG 0.670070 4_4:-78987714 Msa0706090:CDS
TGAAGAAGTTGTTGAATGCG+TGG 0.678762 4_4:+78993169 None:intergenic
AAGGACGATCAGTGAAAACA+GGG 0.691019 4_4:+78988366 None:intergenic
GTGCAGCATGAGATTCGACA+AGG 0.695395 4_4:+78988186 None:intergenic
TTAAACAAAATGGACATGTG+GGG 0.696809 4_4:-78987549 Msa0706090:CDS
AGAAACATAAGCAAATCAGG+GGG 0.707791 4_4:+78985746 None:intergenic
TTTGTCATGTAAAACCCAAG+GGG 0.737360 4_4:+78990098 None:intergenic
TATGAAGGAACCATAAAACG+GGG 0.757617 4_4:-78987829 Msa0706090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAAAAAAAAAAAAAA+AGG + chr4_4:78992998-78993017 None:intergenic 0.0%
!! TTATAAAAAAAAAAAAAAAA+AGG + chr4_4:78992998-78993017 None:intergenic 0.0%
!! TAAATAAAAATTTAACACTT+AGG + chr4_4:78987720-78987739 None:intergenic 10.0%
!! GTTATTATTTGTAAAAAATT+CGG - chr4_4:78988329-78988348 Msa0706090:CDS 10.0%
!! AATTTATACTAACATTAATT+GGG + chr4_4:78989713-78989732 None:intergenic 10.0%
!! AAATTTATACTAACATTAAT+TGG + chr4_4:78989714-78989733 None:intergenic 10.0%
!! ACATTGAATATAATAATAAA+TGG - chr4_4:78989917-78989936 Msa0706090:intron 10.0%
!! CATTGAATATAATAATAAAT+GGG - chr4_4:78989918-78989937 Msa0706090:intron 10.0%
!!! TAATTTCTAAAATATTATGT+TGG + chr4_4:78990393-78990412 None:intergenic 10.0%
!!! TATATTTTCTAATTTTATGT+TGG - chr4_4:78992004-78992023 Msa0706090:intron 10.0%
!! ATAAAAATAAATGAAATCTA+AGG - chr4_4:78992288-78992307 Msa0706090:intron 10.0%
!! TAAATAAAAATTTAACACTT+AGG + chr4_4:78987720-78987739 None:intergenic 10.0%
!! GTTATTATTTGTAAAAAATT+CGG - chr4_4:78988329-78988348 Msa0706090:CDS 10.0%
!! AATTTATACTAACATTAATT+GGG + chr4_4:78989713-78989732 None:intergenic 10.0%
!! AAATTTATACTAACATTAAT+TGG + chr4_4:78989714-78989733 None:intergenic 10.0%
!! ACATTGAATATAATAATAAA+TGG - chr4_4:78989917-78989936 Msa0706090:intron 10.0%
!! CATTGAATATAATAATAAAT+GGG - chr4_4:78989918-78989937 Msa0706090:intron 10.0%
!!! TAATTTCTAAAATATTATGT+TGG + chr4_4:78990393-78990412 None:intergenic 10.0%
!!! TATATTTTCTAATTTTATGT+TGG - chr4_4:78992004-78992023 Msa0706090:intron 10.0%
!! ATAAAAATAAATGAAATCTA+AGG - chr4_4:78992288-78992307 Msa0706090:intron 10.0%
!! TCGAAAGAAAAAATAAAAAT+CGG + chr4_4:78985933-78985952 None:intergenic 15.0%
!!! TTTAATTTAATTGCATAAGA+CGG - chr4_4:78986445-78986464 Msa0706090:intron 15.0%
!!! AATATAGACATTTTGATAAA+TGG - chr4_4:78986575-78986594 Msa0706090:intron 15.0%
!! ATAAAAATAGATGACTATAA+AGG + chr4_4:78986827-78986846 None:intergenic 15.0%
!! AATTTATCAAAATTAAACAC+TGG + chr4_4:78988209-78988228 None:intergenic 15.0%
!! ATTCATTATATTACATGAAT+AGG - chr4_4:78988258-78988277 Msa0706090:CDS 15.0%
!!! TCATTTTTCAATCTATAATT+GGG + chr4_4:78989510-78989529 None:intergenic 15.0%
!!! TTCATTTTTCAATCTATAAT+TGG + chr4_4:78989511-78989530 None:intergenic 15.0%
!! TAAATGGGATATAATAATTT+AGG - chr4_4:78989933-78989952 Msa0706090:intron 15.0%
!! AAATGGGATATAATAATTTA+GGG - chr4_4:78989934-78989953 Msa0706090:intron 15.0%
!! GTCAAATAAAAAATAGTAAT+AGG + chr4_4:78990984-78991003 None:intergenic 15.0%
!!! TATCTGAAATAAAAATGAAT+GGG + chr4_4:78991010-78991029 None:intergenic 15.0%
!!! TTATCTGAAATAAAAATGAA+TGG + chr4_4:78991011-78991030 None:intergenic 15.0%
!!! ATTTTTATTTCAGATAACAA+TGG - chr4_4:78991014-78991033 Msa0706090:intron 15.0%
!! AATAATCACATTAAACAAAA+TGG - chr4_4:78991369-78991388 Msa0706090:intron 15.0%
!! TCAAATACAAATTGTTATAA+AGG + chr4_4:78992161-78992180 None:intergenic 15.0%
!!! TTCAAACTTTAAAGTAAAAA+TGG + chr4_4:78992265-78992284 None:intergenic 15.0%
!! ATTAATAAAGTGAATATAGA+GGG + chr4_4:78992587-78992606 None:intergenic 15.0%
!! AATTAATAAAGTGAATATAG+AGG + chr4_4:78992588-78992607 None:intergenic 15.0%
!!! TTTTATAAAACATGTTTTCT+AGG - chr4_4:78993010-78993029 Msa0706090:intron 15.0%
!! TCGAAAGAAAAAATAAAAAT+CGG + chr4_4:78985933-78985952 None:intergenic 15.0%
!!! TTTAATTTAATTGCATAAGA+CGG - chr4_4:78986445-78986464 Msa0706090:intron 15.0%
!!! AATATAGACATTTTGATAAA+TGG - chr4_4:78986575-78986594 Msa0706090:intron 15.0%
!! ATAAAAATAGATGACTATAA+AGG + chr4_4:78986827-78986846 None:intergenic 15.0%
!! AATTTATCAAAATTAAACAC+TGG + chr4_4:78988209-78988228 None:intergenic 15.0%
!! ATTCATTATATTACATGAAT+AGG - chr4_4:78988258-78988277 Msa0706090:CDS 15.0%
!!! TCATTTTTCAATCTATAATT+GGG + chr4_4:78989510-78989529 None:intergenic 15.0%
!!! TTCATTTTTCAATCTATAAT+TGG + chr4_4:78989511-78989530 None:intergenic 15.0%
!! TAAATGGGATATAATAATTT+AGG - chr4_4:78989933-78989952 Msa0706090:intron 15.0%
!! AAATGGGATATAATAATTTA+GGG - chr4_4:78989934-78989953 Msa0706090:intron 15.0%
!! GTCAAATAAAAAATAGTAAT+AGG + chr4_4:78990984-78991003 None:intergenic 15.0%
!!! TATCTGAAATAAAAATGAAT+GGG + chr4_4:78991010-78991029 None:intergenic 15.0%
!!! TTATCTGAAATAAAAATGAA+TGG + chr4_4:78991011-78991030 None:intergenic 15.0%
!!! ATTTTTATTTCAGATAACAA+TGG - chr4_4:78991014-78991033 Msa0706090:intron 15.0%
!! AATAATCACATTAAACAAAA+TGG - chr4_4:78991369-78991388 Msa0706090:intron 15.0%
!! TCAAATACAAATTGTTATAA+AGG + chr4_4:78992161-78992180 None:intergenic 15.0%
!!! TTCAAACTTTAAAGTAAAAA+TGG + chr4_4:78992265-78992284 None:intergenic 15.0%
!! ATTAATAAAGTGAATATAGA+GGG + chr4_4:78992587-78992606 None:intergenic 15.0%
!! AATTAATAAAGTGAATATAG+AGG + chr4_4:78992588-78992607 None:intergenic 15.0%
!!! TTTTATAAAACATGTTTTCT+AGG - chr4_4:78993010-78993029 Msa0706090:intron 15.0%
!!! TTCTTTTCTTCTCTTTTATT+AGG - chr4_4:78986104-78986123 Msa0706090:exon 20.0%
!!! TCTTTTCTTCTCTTTTATTA+GGG - chr4_4:78986105-78986124 Msa0706090:exon 20.0%
!!! GTTTTTCTTTTTTTGTATCT+TGG - chr4_4:78986220-78986239 Msa0706090:CDS 20.0%
!! CTTAAAAATTGGATTAATGT+GGG - chr4_4:78986903-78986922 Msa0706090:intron 20.0%
!! TCAATTTATATACAGTCATT+TGG + chr4_4:78987783-78987802 None:intergenic 20.0%
!! AATAAGTTATACAATCTATC+AGG - chr4_4:78987964-78987983 Msa0706090:intron 20.0%
!! CAGAAAAAGATATATCAAAA+CGG + chr4_4:78988047-78988066 None:intergenic 20.0%
!! TATCAATATAACTCAGATAA+AGG + chr4_4:78988233-78988252 None:intergenic 20.0%
!!! ATGACTTTTAATATTTTGCA+TGG + chr4_4:78988646-78988665 None:intergenic 20.0%
!!! TAGAGTATTTCTACTAAAAA+GGG + chr4_4:78988776-78988795 None:intergenic 20.0%
!!! TTAGAGTATTTCTACTAAAA+AGG + chr4_4:78988777-78988796 None:intergenic 20.0%
!!! TTTTAGTAGAAATACTCTAA+AGG - chr4_4:78988777-78988796 Msa0706090:intron 20.0%
!!! TTTGTGAAATCATCATTTTT+TGG - chr4_4:78989164-78989183 Msa0706090:intron 20.0%
!!! TTGTGAAATCATCATTTTTT+GGG - chr4_4:78989165-78989184 Msa0706090:intron 20.0%
!! ATGGTCAAAAAATAAACTTA+GGG - chr4_4:78989356-78989375 Msa0706090:intron 20.0%
!!! TTTCTATCTCAAATTTTTCA+TGG - chr4_4:78990004-78990023 Msa0706090:CDS 20.0%
!!! CTTCTTTCTTTTATGTTTAT+CGG + chr4_4:78990050-78990069 None:intergenic 20.0%
!! TAAACATAAAAGAAAGAAGT+TGG - chr4_4:78990051-78990070 Msa0706090:CDS 20.0%
!! AACAAAATAAAAAAATGACC+AGG + chr4_4:78990330-78990349 None:intergenic 20.0%
!!! TTTTTATTTTGTTCATAACC+TGG - chr4_4:78990337-78990356 Msa0706090:CDS 20.0%
!!! AAATTACAAGTTTTCATCAA+TGG + chr4_4:78990433-78990452 None:intergenic 20.0%
!!! TAAAAGGTAAGGTTTTATTA+AGG - chr4_4:78991452-78991471 Msa0706090:intron 20.0%
!!! AAAAGGTAAGGTTTTATTAA+GGG - chr4_4:78991453-78991472 Msa0706090:intron 20.0%
!! AAAACAATTATCGTAGTATA+TGG - chr4_4:78992106-78992125 Msa0706090:intron 20.0%
!!! AAATGTCTTAGTTTTAAACT+TGG - chr4_4:78992197-78992216 Msa0706090:CDS 20.0%
!! GATAAAAAGCTAATTTATAG+TGG - chr4_4:78992396-78992415 Msa0706090:intron 20.0%
!!! GATTTTATCAAAAAGAAAGT+TGG - chr4_4:78992482-78992501 Msa0706090:intron 20.0%
!! TAGCTTATTTAACAAACATA+TGG - chr4_4:78992528-78992547 Msa0706090:intron 20.0%
!!! TTCTTTTCTTCTCTTTTATT+AGG - chr4_4:78986104-78986123 Msa0706090:exon 20.0%
!!! TCTTTTCTTCTCTTTTATTA+GGG - chr4_4:78986105-78986124 Msa0706090:exon 20.0%
!!! GTTTTTCTTTTTTTGTATCT+TGG - chr4_4:78986220-78986239 Msa0706090:CDS 20.0%
!! CTTAAAAATTGGATTAATGT+GGG - chr4_4:78986903-78986922 Msa0706090:intron 20.0%
!! TCAATTTATATACAGTCATT+TGG + chr4_4:78987783-78987802 None:intergenic 20.0%
!! AATAAGTTATACAATCTATC+AGG - chr4_4:78987964-78987983 Msa0706090:intron 20.0%
!! CAGAAAAAGATATATCAAAA+CGG + chr4_4:78988047-78988066 None:intergenic 20.0%
!! TATCAATATAACTCAGATAA+AGG + chr4_4:78988233-78988252 None:intergenic 20.0%
!!! ATGACTTTTAATATTTTGCA+TGG + chr4_4:78988646-78988665 None:intergenic 20.0%
!!! TAGAGTATTTCTACTAAAAA+GGG + chr4_4:78988776-78988795 None:intergenic 20.0%
!!! TTAGAGTATTTCTACTAAAA+AGG + chr4_4:78988777-78988796 None:intergenic 20.0%
!!! TTTTAGTAGAAATACTCTAA+AGG - chr4_4:78988777-78988796 Msa0706090:intron 20.0%
!!! TTTGTGAAATCATCATTTTT+TGG - chr4_4:78989164-78989183 Msa0706090:intron 20.0%
!!! TTGTGAAATCATCATTTTTT+GGG - chr4_4:78989165-78989184 Msa0706090:intron 20.0%
!! ATGGTCAAAAAATAAACTTA+GGG - chr4_4:78989356-78989375 Msa0706090:intron 20.0%
!!! TTTCTATCTCAAATTTTTCA+TGG - chr4_4:78990004-78990023 Msa0706090:CDS 20.0%
!!! CTTCTTTCTTTTATGTTTAT+CGG + chr4_4:78990050-78990069 None:intergenic 20.0%
!! TAAACATAAAAGAAAGAAGT+TGG - chr4_4:78990051-78990070 Msa0706090:CDS 20.0%
!! AACAAAATAAAAAAATGACC+AGG + chr4_4:78990330-78990349 None:intergenic 20.0%
!!! TTTTTATTTTGTTCATAACC+TGG - chr4_4:78990337-78990356 Msa0706090:CDS 20.0%
!!! AAATTACAAGTTTTCATCAA+TGG + chr4_4:78990433-78990452 None:intergenic 20.0%
!!! TAAAAGGTAAGGTTTTATTA+AGG - chr4_4:78991452-78991471 Msa0706090:intron 20.0%
!!! AAAAGGTAAGGTTTTATTAA+GGG - chr4_4:78991453-78991472 Msa0706090:intron 20.0%
!! AAAACAATTATCGTAGTATA+TGG - chr4_4:78992106-78992125 Msa0706090:intron 20.0%
!!! AAATGTCTTAGTTTTAAACT+TGG - chr4_4:78992197-78992216 Msa0706090:CDS 20.0%
!! GATAAAAAGCTAATTTATAG+TGG - chr4_4:78992396-78992415 Msa0706090:intron 20.0%
!!! GATTTTATCAAAAAGAAAGT+TGG - chr4_4:78992482-78992501 Msa0706090:intron 20.0%
!! TAGCTTATTTAACAAACATA+TGG - chr4_4:78992528-78992547 Msa0706090:intron 20.0%
! AAATGAAATAAAGTAGCAGA+GGG + chr4_4:78985860-78985879 None:intergenic 25.0%
! AAAATGAAATAAAGTAGCAG+AGG + chr4_4:78985861-78985880 None:intergenic 25.0%
! GCGAAAAGAGAATAAAAAAT+AGG + chr4_4:78985911-78985930 None:intergenic 25.0%
!!! CTTTTTTTGTATCTTGGTTT+TGG - chr4_4:78986226-78986245 Msa0706090:CDS 25.0%
!! ATTGTAGTAACTTTACGTTT+TGG - chr4_4:78986249-78986268 Msa0706090:intron 25.0%
!! TTGTAGTAACTTTACGTTTT+GGG - chr4_4:78986250-78986269 Msa0706090:intron 25.0%
!! TACTTTTCAATGTTTGTTTC+TGG - chr4_4:78986372-78986391 Msa0706090:intron 25.0%
!!! ACTTTTCAATGTTTGTTTCT+GGG - chr4_4:78986373-78986392 Msa0706090:intron 25.0%
!! TGGATTTTCATATTCAGTTT+AGG - chr4_4:78986528-78986547 Msa0706090:intron 25.0%
!! GGATTTTCATATTCAGTTTA+GGG - chr4_4:78986529-78986548 Msa0706090:intron 25.0%
!! GATTTTCATATTCAGTTTAG+GGG - chr4_4:78986530-78986549 Msa0706090:intron 25.0%
! TCATAATATTGTAAAGCTCA+AGG - chr4_4:78986614-78986633 Msa0706090:intron 25.0%
! CATAATATTGTAAAGCTCAA+GGG - chr4_4:78986615-78986634 Msa0706090:intron 25.0%
!! TTTCTTTTGTAAATCGAACT+TGG + chr4_4:78986784-78986803 None:intergenic 25.0%
! ACTTGAATGTGCTTAAAAAT+TGG - chr4_4:78986892-78986911 Msa0706090:CDS 25.0%
! GCTTAAAAATTGGATTAATG+TGG - chr4_4:78986902-78986921 Msa0706090:intron 25.0%
!! ATAATCGCTAATTTGTGTTA+AGG + chr4_4:78987030-78987049 None:intergenic 25.0%
!! TATGAAATTGCATCTTTTGA+TGG - chr4_4:78987380-78987399 Msa0706090:intron 25.0%
!! TTGTTAAAGTATTTCGAAAC+AGG - chr4_4:78987618-78987637 Msa0706090:CDS 25.0%
! TATGTTGCAAATTGAAGATT+GGG + chr4_4:78987751-78987770 None:intergenic 25.0%
! ATATGTTGCAAATTGAAGAT+TGG + chr4_4:78987752-78987771 None:intergenic 25.0%
! ATTTATATACAGTCATTTGG+AGG + chr4_4:78987780-78987799 None:intergenic 25.0%
! TTACTGTTTACTCATGTTTA+TGG - chr4_4:78987820-78987839 Msa0706090:CDS 25.0%
! TATTTGATTGCATTAGACAT+CGG - chr4_4:78987921-78987940 Msa0706090:intron 25.0%
! AATAGTAAAAGAGATCCTTT+AGG - chr4_4:78988355-78988374 Msa0706090:CDS 25.0%
! TAATTGTATAATTGAGTAGC+TGG + chr4_4:78988447-78988466 None:intergenic 25.0%
!!! GTTATTTTTTACAGTGTGTT+TGG - chr4_4:78988492-78988511 Msa0706090:intron 25.0%
! TGATTAGTGATTATTATTGC+AGG - chr4_4:78988517-78988536 Msa0706090:intron 25.0%
! ATATTAAAAGTCATCCATGA+AGG - chr4_4:78988652-78988671 Msa0706090:intron 25.0%
!! AGAGTATTTCTACTAAAAAG+GGG + chr4_4:78988775-78988794 None:intergenic 25.0%
!!! TTATAATTTGCTCCAAGAAA+AGG - chr4_4:78988926-78988945 Msa0706090:intron 25.0%
! CATGGTCAAAAAATAAACTT+AGG - chr4_4:78989355-78989374 Msa0706090:intron 25.0%
! TCTCTTGACTATATTAAAGT+TGG - chr4_4:78989551-78989570 Msa0706090:intron 25.0%
!! ATGCATGTCAATTTTTCTTT+TGG - chr4_4:78989764-78989783 Msa0706090:intron 25.0%
!! TAATTTAGGGTTTCATTGAT+TGG - chr4_4:78989947-78989966 Msa0706090:intron 25.0%
! AGACTAAGAGTCTAATAAAA+AGG + chr4_4:78990860-78990879 None:intergenic 25.0%
! TGAAATAAAAATGAATGGGA+TGG + chr4_4:78991006-78991025 None:intergenic 25.0%
! TGATCAATATTCCTCAATTA+CGG - chr4_4:78991073-78991092 Msa0706090:intron 25.0%
!!! TAAGATTTCTAGTTTAGCAT+TGG + chr4_4:78991145-78991164 None:intergenic 25.0%
! ATTAAACAAAATGGACATGT+GGG - chr4_4:78991378-78991397 Msa0706090:intron 25.0%
! TGAATTTCAAGAGTGAAAAA+AGG + chr4_4:78991564-78991583 None:intergenic 25.0%
!!! GAATTTTTAAGAAACTGAGT+TGG - chr4_4:78992847-78992866 Msa0706090:intron 25.0%
!! ATAAAACATGTTTTCTAGGT+AGG - chr4_4:78993014-78993033 Msa0706090:intron 25.0%
! ATAGAAACATAAGCAAATCA+GGG + chr4_4:78993187-78993206 None:intergenic 25.0%
! AATAGAAACATAAGCAAATC+AGG + chr4_4:78993188-78993207 None:intergenic 25.0%
!! GATTTGCTTATGTTTCTATT+AGG - chr4_4:78993188-78993207 Msa0706090:five_prime_UTR 25.0%
! AAATGAAATAAAGTAGCAGA+GGG + chr4_4:78985860-78985879 None:intergenic 25.0%
! AAAATGAAATAAAGTAGCAG+AGG + chr4_4:78985861-78985880 None:intergenic 25.0%
! GCGAAAAGAGAATAAAAAAT+AGG + chr4_4:78985911-78985930 None:intergenic 25.0%
!!! CTTTTTTTGTATCTTGGTTT+TGG - chr4_4:78986226-78986245 Msa0706090:CDS 25.0%
!! ATTGTAGTAACTTTACGTTT+TGG - chr4_4:78986249-78986268 Msa0706090:intron 25.0%
!! TTGTAGTAACTTTACGTTTT+GGG - chr4_4:78986250-78986269 Msa0706090:intron 25.0%
!! TACTTTTCAATGTTTGTTTC+TGG - chr4_4:78986372-78986391 Msa0706090:intron 25.0%
!!! ACTTTTCAATGTTTGTTTCT+GGG - chr4_4:78986373-78986392 Msa0706090:intron 25.0%
!! TGGATTTTCATATTCAGTTT+AGG - chr4_4:78986528-78986547 Msa0706090:intron 25.0%
!! GGATTTTCATATTCAGTTTA+GGG - chr4_4:78986529-78986548 Msa0706090:intron 25.0%
!! GATTTTCATATTCAGTTTAG+GGG - chr4_4:78986530-78986549 Msa0706090:intron 25.0%
! TCATAATATTGTAAAGCTCA+AGG - chr4_4:78986614-78986633 Msa0706090:intron 25.0%
! CATAATATTGTAAAGCTCAA+GGG - chr4_4:78986615-78986634 Msa0706090:intron 25.0%
!! TTTCTTTTGTAAATCGAACT+TGG + chr4_4:78986784-78986803 None:intergenic 25.0%
! ACTTGAATGTGCTTAAAAAT+TGG - chr4_4:78986892-78986911 Msa0706090:CDS 25.0%
! GCTTAAAAATTGGATTAATG+TGG - chr4_4:78986902-78986921 Msa0706090:intron 25.0%
!! ATAATCGCTAATTTGTGTTA+AGG + chr4_4:78987030-78987049 None:intergenic 25.0%
!! TATGAAATTGCATCTTTTGA+TGG - chr4_4:78987380-78987399 Msa0706090:intron 25.0%
!! TTGTTAAAGTATTTCGAAAC+AGG - chr4_4:78987618-78987637 Msa0706090:CDS 25.0%
! TATGTTGCAAATTGAAGATT+GGG + chr4_4:78987751-78987770 None:intergenic 25.0%
! ATATGTTGCAAATTGAAGAT+TGG + chr4_4:78987752-78987771 None:intergenic 25.0%
! ATTTATATACAGTCATTTGG+AGG + chr4_4:78987780-78987799 None:intergenic 25.0%
! TTACTGTTTACTCATGTTTA+TGG - chr4_4:78987820-78987839 Msa0706090:CDS 25.0%
! TATTTGATTGCATTAGACAT+CGG - chr4_4:78987921-78987940 Msa0706090:intron 25.0%
! AATAGTAAAAGAGATCCTTT+AGG - chr4_4:78988355-78988374 Msa0706090:CDS 25.0%
! TAATTGTATAATTGAGTAGC+TGG + chr4_4:78988447-78988466 None:intergenic 25.0%
!!! GTTATTTTTTACAGTGTGTT+TGG - chr4_4:78988492-78988511 Msa0706090:intron 25.0%
! TGATTAGTGATTATTATTGC+AGG - chr4_4:78988517-78988536 Msa0706090:intron 25.0%
! ATATTAAAAGTCATCCATGA+AGG - chr4_4:78988652-78988671 Msa0706090:intron 25.0%
!! AGAGTATTTCTACTAAAAAG+GGG + chr4_4:78988775-78988794 None:intergenic 25.0%
!!! TTATAATTTGCTCCAAGAAA+AGG - chr4_4:78988926-78988945 Msa0706090:intron 25.0%
! CATGGTCAAAAAATAAACTT+AGG - chr4_4:78989355-78989374 Msa0706090:intron 25.0%
! TCTCTTGACTATATTAAAGT+TGG - chr4_4:78989551-78989570 Msa0706090:intron 25.0%
!! ATGCATGTCAATTTTTCTTT+TGG - chr4_4:78989764-78989783 Msa0706090:intron 25.0%
!! TAATTTAGGGTTTCATTGAT+TGG - chr4_4:78989947-78989966 Msa0706090:intron 25.0%
! AGACTAAGAGTCTAATAAAA+AGG + chr4_4:78990860-78990879 None:intergenic 25.0%
! TGAAATAAAAATGAATGGGA+TGG + chr4_4:78991006-78991025 None:intergenic 25.0%
! TGATCAATATTCCTCAATTA+CGG - chr4_4:78991073-78991092 Msa0706090:intron 25.0%
!!! TAAGATTTCTAGTTTAGCAT+TGG + chr4_4:78991145-78991164 None:intergenic 25.0%
! ATTAAACAAAATGGACATGT+GGG - chr4_4:78991378-78991397 Msa0706090:intron 25.0%
! TGAATTTCAAGAGTGAAAAA+AGG + chr4_4:78991564-78991583 None:intergenic 25.0%
!!! GAATTTTTAAGAAACTGAGT+TGG - chr4_4:78992847-78992866 Msa0706090:intron 25.0%
!! ATAAAACATGTTTTCTAGGT+AGG - chr4_4:78993014-78993033 Msa0706090:intron 25.0%
! ATAGAAACATAAGCAAATCA+GGG + chr4_4:78993187-78993206 None:intergenic 25.0%
! AATAGAAACATAAGCAAATC+AGG + chr4_4:78993188-78993207 None:intergenic 25.0%
!! GATTTGCTTATGTTTCTATT+AGG - chr4_4:78993188-78993207 Msa0706090:five_prime_UTR 25.0%
! TGTAGTAACTTTACGTTTTG+GGG - chr4_4:78986251-78986270 Msa0706090:intron 30.0%
CAATTGATCTCTGTGTATTA+CGG - chr4_4:78986348-78986367 Msa0706090:intron 30.0%
!!! CTTTTCAATGTTTGTTTCTG+GGG - chr4_4:78986374-78986393 Msa0706090:intron 30.0%
!! TTGTTTCTGGGGATAAAATT+AGG - chr4_4:78986385-78986404 Msa0706090:intron 30.0%
!! TGTTTCTGGGGATAAAATTA+GGG - chr4_4:78986386-78986405 Msa0706090:intron 30.0%
CTTACTAACTGAAACAAGTT+TGG + chr4_4:78986481-78986500 None:intergenic 30.0%
! TTCTGTTGAATTTTCTATGC+AGG - chr4_4:78986644-78986663 Msa0706090:intron 30.0%
! TCTGTTGAATTTTCTATGCA+GGG - chr4_4:78986645-78986664 Msa0706090:intron 30.0%
CGAGAGTTAAATCAGTAATA+CGG + chr4_4:78986869-78986888 None:intergenic 30.0%
TACATAAACATTGCACTAAG+TGG + chr4_4:78986946-78986965 None:intergenic 30.0%
!! TGAATTCTTTTGGAAACTGT+AGG + chr4_4:78987166-78987185 None:intergenic 30.0%
!! TACTGAATGATCTTTAAAGC+AGG + chr4_4:78987194-78987213 None:intergenic 30.0%
GATTGTATAGACTTTATGTG+CGG - chr4_4:78987296-78987315 Msa0706090:CDS 30.0%
AAATCATTTAACAGTCCTGT+GGG + chr4_4:78987424-78987443 None:intergenic 30.0%
!! TCGTTTTTGAATACCATTGT+GGG + chr4_4:78987455-78987474 None:intergenic 30.0%
! GTTTGGGTTCTTATTTAGTT+TGG - chr4_4:78987513-78987532 Msa0706090:CDS 30.0%
! TGTTTTCTGTACAAATTGCT+TGG + chr4_4:78987567-78987586 None:intergenic 30.0%
!!! ACCATTTTCTGAAATCAAAC+AGG - chr4_4:78987692-78987711 Msa0706090:CDS 30.0%
! ACCTGTTTGATTTCAGAAAA+TGG + chr4_4:78987696-78987715 None:intergenic 30.0%
!!! AATCATGCCTGTTTTTGAAT+AGG - chr4_4:78988394-78988413 Msa0706090:CDS 30.0%
CACACTGTAAAAAATAACAC+AGG + chr4_4:78988490-78988509 None:intergenic 30.0%
!! CAATTTTTCAGCAAGAGAAT+CGG + chr4_4:78988566-78988585 None:intergenic 30.0%
TACCTCATAACGGTATTTAT+CGG + chr4_4:78988680-78988699 None:intergenic 30.0%
! TACCTCATTATTCCTTTTCT+TGG + chr4_4:78988941-78988960 None:intergenic 30.0%
!!! CTTTTTATCGACATTGGTTT+GGG - chr4_4:78989464-78989483 Msa0706090:intron 30.0%
! ATCTCAAATTTTTCATGGTC+AGG - chr4_4:78990009-78990028 Msa0706090:CDS 30.0%
CATAAAAGAAAGAAGTTGGA+CGG - chr4_4:78990055-78990074 Msa0706090:CDS 30.0%
ATAAAAGAAAGAAGTTGGAC+GGG - chr4_4:78990056-78990075 Msa0706090:CDS 30.0%
! TCAGAGATTGAAGCAATTTT+TGG - chr4_4:78990117-78990136 Msa0706090:CDS 30.0%
!! TGTTCTGGAGAATTTGAAAA+CGG + chr4_4:78990473-78990492 None:intergenic 30.0%
! ATATCCCATTGATGATCTAT+TGG - chr4_4:78990520-78990539 Msa0706090:intron 30.0%
TTCACCAATAGATCATCAAT+GGG + chr4_4:78990527-78990546 None:intergenic 30.0%
! TGGGATTTTTGTACTTCTTT+TGG - chr4_4:78990641-78990660 Msa0706090:intron 30.0%
TCAAAATCTTCCAAAGAGTA+CGG + chr4_4:78990686-78990705 None:intergenic 30.0%
AGGATTACGAATAAGTTAGA+TGG + chr4_4:78990840-78990859 None:intergenic 30.0%
TTCAGATAACAATGGTTAAC+TGG - chr4_4:78991022-78991041 Msa0706090:intron 30.0%
ACTATGAAGGAACCATAAAA+CGG - chr4_4:78991097-78991116 Msa0706090:intron 30.0%
ACTAGAAATCTTATGTGAGT+TGG - chr4_4:78991152-78991171 Msa0706090:intron 30.0%
CATTAAACAAAATGGACATG+TGG - chr4_4:78991377-78991396 Msa0706090:intron 30.0%
TTAAACAAAATGGACATGTG+GGG - chr4_4:78991379-78991398 Msa0706090:intron 30.0%
TTGAAATTCAATTTGCAGTG+AGG - chr4_4:78991574-78991593 Msa0706090:intron 30.0%
! AATTCTTTTCCATTTTCTGC+TGG + chr4_4:78991662-78991681 None:intergenic 30.0%
TGGAAAAGAATTATCCAGAA+AGG - chr4_4:78991670-78991689 Msa0706090:intron 30.0%
TCTATACTATTCTTCTCTGA+TGG + chr4_4:78991698-78991717 None:intergenic 30.0%
AACAGACAACAATATAAGCA+AGG + chr4_4:78991746-78991765 None:intergenic 30.0%
AAACAAAATGCAAACATAGC+AGG + chr4_4:78991985-78992004 None:intergenic 30.0%
AAAAAATCTCCAGAAGTCAA+GGG + chr4_4:78992636-78992655 None:intergenic 30.0%
TCCTCAAATATGTTAACAAG+TGG - chr4_4:78992799-78992818 Msa0706090:intron 30.0%
! TCCACTTGTTAACATATTTG+AGG + chr4_4:78992803-78992822 None:intergenic 30.0%
AGTGGAAAGAAGATTAACAA+TGG - chr4_4:78992817-78992836 Msa0706090:intron 30.0%
!! ATAGCGTTGAATGTAGTTTT+TGG - chr4_4:78992873-78992892 Msa0706090:intron 30.0%
!! TGTAGTTTTTGGATCCATTT+TGG - chr4_4:78992884-78992903 Msa0706090:intron 30.0%
TTTCTACCATGATTGAAGAA+TGG + chr4_4:78992961-78992980 None:intergenic 30.0%
TCACAACCACAATATTGAAA+AGG + chr4_4:78993071-78993090 None:intergenic 30.0%
TAGAAACATAAGCAAATCAG+GGG + chr4_4:78993186-78993205 None:intergenic 30.0%
AGTTGTCAAACTCAAGTATA+TGG - chr4_4:78993260-78993279 Msa0706090:five_prime_UTR 30.0%
! TGTAGTAACTTTACGTTTTG+GGG - chr4_4:78986251-78986270 Msa0706090:intron 30.0%
CAATTGATCTCTGTGTATTA+CGG - chr4_4:78986348-78986367 Msa0706090:intron 30.0%
!!! CTTTTCAATGTTTGTTTCTG+GGG - chr4_4:78986374-78986393 Msa0706090:intron 30.0%
!! TTGTTTCTGGGGATAAAATT+AGG - chr4_4:78986385-78986404 Msa0706090:intron 30.0%
!! TGTTTCTGGGGATAAAATTA+GGG - chr4_4:78986386-78986405 Msa0706090:intron 30.0%
CTTACTAACTGAAACAAGTT+TGG + chr4_4:78986481-78986500 None:intergenic 30.0%
! TTCTGTTGAATTTTCTATGC+AGG - chr4_4:78986644-78986663 Msa0706090:intron 30.0%
! TCTGTTGAATTTTCTATGCA+GGG - chr4_4:78986645-78986664 Msa0706090:intron 30.0%
CGAGAGTTAAATCAGTAATA+CGG + chr4_4:78986869-78986888 None:intergenic 30.0%
TACATAAACATTGCACTAAG+TGG + chr4_4:78986946-78986965 None:intergenic 30.0%
!! TGAATTCTTTTGGAAACTGT+AGG + chr4_4:78987166-78987185 None:intergenic 30.0%
!! TACTGAATGATCTTTAAAGC+AGG + chr4_4:78987194-78987213 None:intergenic 30.0%
GATTGTATAGACTTTATGTG+CGG - chr4_4:78987296-78987315 Msa0706090:CDS 30.0%
AAATCATTTAACAGTCCTGT+GGG + chr4_4:78987424-78987443 None:intergenic 30.0%
!! TCGTTTTTGAATACCATTGT+GGG + chr4_4:78987455-78987474 None:intergenic 30.0%
! GTTTGGGTTCTTATTTAGTT+TGG - chr4_4:78987513-78987532 Msa0706090:CDS 30.0%
! TGTTTTCTGTACAAATTGCT+TGG + chr4_4:78987567-78987586 None:intergenic 30.0%
!!! ACCATTTTCTGAAATCAAAC+AGG - chr4_4:78987692-78987711 Msa0706090:CDS 30.0%
! ACCTGTTTGATTTCAGAAAA+TGG + chr4_4:78987696-78987715 None:intergenic 30.0%
!!! AATCATGCCTGTTTTTGAAT+AGG - chr4_4:78988394-78988413 Msa0706090:CDS 30.0%
CACACTGTAAAAAATAACAC+AGG + chr4_4:78988490-78988509 None:intergenic 30.0%
!! CAATTTTTCAGCAAGAGAAT+CGG + chr4_4:78988566-78988585 None:intergenic 30.0%
TACCTCATAACGGTATTTAT+CGG + chr4_4:78988680-78988699 None:intergenic 30.0%
! TACCTCATTATTCCTTTTCT+TGG + chr4_4:78988941-78988960 None:intergenic 30.0%
!!! CTTTTTATCGACATTGGTTT+GGG - chr4_4:78989464-78989483 Msa0706090:intron 30.0%
! ATCTCAAATTTTTCATGGTC+AGG - chr4_4:78990009-78990028 Msa0706090:CDS 30.0%
CATAAAAGAAAGAAGTTGGA+CGG - chr4_4:78990055-78990074 Msa0706090:CDS 30.0%
ATAAAAGAAAGAAGTTGGAC+GGG - chr4_4:78990056-78990075 Msa0706090:CDS 30.0%
! TCAGAGATTGAAGCAATTTT+TGG - chr4_4:78990117-78990136 Msa0706090:CDS 30.0%
!! TGTTCTGGAGAATTTGAAAA+CGG + chr4_4:78990473-78990492 None:intergenic 30.0%
! ATATCCCATTGATGATCTAT+TGG - chr4_4:78990520-78990539 Msa0706090:intron 30.0%
TTCACCAATAGATCATCAAT+GGG + chr4_4:78990527-78990546 None:intergenic 30.0%
! TGGGATTTTTGTACTTCTTT+TGG - chr4_4:78990641-78990660 Msa0706090:intron 30.0%
TCAAAATCTTCCAAAGAGTA+CGG + chr4_4:78990686-78990705 None:intergenic 30.0%
AGGATTACGAATAAGTTAGA+TGG + chr4_4:78990840-78990859 None:intergenic 30.0%
TTCAGATAACAATGGTTAAC+TGG - chr4_4:78991022-78991041 Msa0706090:intron 30.0%
ACTATGAAGGAACCATAAAA+CGG - chr4_4:78991097-78991116 Msa0706090:intron 30.0%
ACTAGAAATCTTATGTGAGT+TGG - chr4_4:78991152-78991171 Msa0706090:intron 30.0%
CATTAAACAAAATGGACATG+TGG - chr4_4:78991377-78991396 Msa0706090:intron 30.0%
TTAAACAAAATGGACATGTG+GGG - chr4_4:78991379-78991398 Msa0706090:intron 30.0%
TTGAAATTCAATTTGCAGTG+AGG - chr4_4:78991574-78991593 Msa0706090:intron 30.0%
! AATTCTTTTCCATTTTCTGC+TGG + chr4_4:78991662-78991681 None:intergenic 30.0%
TGGAAAAGAATTATCCAGAA+AGG - chr4_4:78991670-78991689 Msa0706090:intron 30.0%
TCTATACTATTCTTCTCTGA+TGG + chr4_4:78991698-78991717 None:intergenic 30.0%
AACAGACAACAATATAAGCA+AGG + chr4_4:78991746-78991765 None:intergenic 30.0%
AAACAAAATGCAAACATAGC+AGG + chr4_4:78991985-78992004 None:intergenic 30.0%
AAAAAATCTCCAGAAGTCAA+GGG + chr4_4:78992636-78992655 None:intergenic 30.0%
TCCTCAAATATGTTAACAAG+TGG - chr4_4:78992799-78992818 Msa0706090:intron 30.0%
! TCCACTTGTTAACATATTTG+AGG + chr4_4:78992803-78992822 None:intergenic 30.0%
AGTGGAAAGAAGATTAACAA+TGG - chr4_4:78992817-78992836 Msa0706090:intron 30.0%
!! ATAGCGTTGAATGTAGTTTT+TGG - chr4_4:78992873-78992892 Msa0706090:intron 30.0%
!! TGTAGTTTTTGGATCCATTT+TGG - chr4_4:78992884-78992903 Msa0706090:intron 30.0%
TTTCTACCATGATTGAAGAA+TGG + chr4_4:78992961-78992980 None:intergenic 30.0%
TCACAACCACAATATTGAAA+AGG + chr4_4:78993071-78993090 None:intergenic 30.0%
TAGAAACATAAGCAAATCAG+GGG + chr4_4:78993186-78993205 None:intergenic 30.0%
AGTTGTCAAACTCAAGTATA+TGG - chr4_4:78993260-78993279 Msa0706090:five_prime_UTR 30.0%
!! TTTTTCAACTGTTTCCGTTG+TGG - chr4_4:78985879-78985898 Msa0706090:three_prime_UTR 35.0%
AAGAAAACCCTAAAATGCGT+CGG + chr4_4:78986089-78986108 None:intergenic 35.0%
ATAAAAACTCCAACATCGCA+GGG + chr4_4:78986144-78986163 None:intergenic 35.0%
AATAAAAACTCCAACATCGC+AGG + chr4_4:78986145-78986164 None:intergenic 35.0%
! GGGTTTTTCGTATGAACATT+GGG - chr4_4:78986271-78986290 Msa0706090:intron 35.0%
! GAAACAAGTTTGGAATTGCA+TGG + chr4_4:78986471-78986490 None:intergenic 35.0%
! CTGATTGTTCTGAGTTTAAC+TGG - chr4_4:78986508-78986527 Msa0706090:intron 35.0%
! CTTTCTCAATGCCTCTTTTA+AGG - chr4_4:78986699-78986718 Msa0706090:intron 35.0%
AAAGGCTTTCTCCTTAAAAG+AGG + chr4_4:78986713-78986732 None:intergenic 35.0%
!! TCTTTTAAGGAGAAAGCCTT+TGG - chr4_4:78986712-78986731 Msa0706090:intron 35.0%
GACGAAGTATGAAATGCAAA+AGG + chr4_4:78986978-78986997 None:intergenic 35.0%
CAAATCATTTAACAGTCCTG+TGG + chr4_4:78987425-78987444 None:intergenic 35.0%
!!! GATTTGTTTTGATCCCACAA+TGG - chr4_4:78987439-78987458 Msa0706090:intron 35.0%
!! CTCGTTTTTGAATACCATTG+TGG + chr4_4:78987456-78987475 None:intergenic 35.0%
CAATGGTATTCAAAAACGAG+AGG - chr4_4:78987456-78987475 Msa0706090:intron 35.0%
!! GGGTTCTTATTTAGTTTGGA+CGG - chr4_4:78987517-78987536 Msa0706090:CDS 35.0%
!! GGTTCTTATTTAGTTTGGAC+GGG - chr4_4:78987518-78987537 Msa0706090:CDS 35.0%
TTACAGAGACCAAATTGACA+TGG - chr4_4:78988300-78988319 Msa0706090:CDS 35.0%
AACTCCAAACCATGTCAATT+TGG + chr4_4:78988312-78988331 None:intergenic 35.0%
! TTGTCGTTTACAGTTCCTAA+AGG + chr4_4:78988373-78988392 None:intergenic 35.0%
GCATGTACCTATTCAAAAAC+AGG + chr4_4:78988404-78988423 None:intergenic 35.0%
ATAGGTACATGCAAATGATC+TGG - chr4_4:78988412-78988431 Msa0706090:CDS 35.0%
TTCTCTTGCTGAAAAATTGC+AGG - chr4_4:78988567-78988586 Msa0706090:intron 35.0%
! ATACTCTAAAGGCTTTCATC+CGG - chr4_4:78988788-78988807 Msa0706090:intron 35.0%
TTTGTCATGTAAAACCCAAG+GGG + chr4_4:78988833-78988852 None:intergenic 35.0%
GTTTGTCATGTAAAACCCAA+GGG + chr4_4:78988834-78988853 None:intergenic 35.0%
AGTTTGTCATGTAAAACCCA+AGG + chr4_4:78988835-78988854 None:intergenic 35.0%
! TTGGGTTTTACATGACAAAC+TGG - chr4_4:78988834-78988853 Msa0706090:intron 35.0%
! GGAAAGGTTTTTCTCAAAGA+CGG - chr4_4:78988901-78988920 Msa0706090:intron 35.0%
CTCCAAGAAAAGGAATAATG+AGG - chr4_4:78988936-78988955 Msa0706090:intron 35.0%
TGTTCGTGATTCACAATCTA+GGG + chr4_4:78989092-78989111 None:intergenic 35.0%
TTGTTCGTGATTCACAATCT+AGG + chr4_4:78989093-78989112 None:intergenic 35.0%
!!! GACCAATTTTTTGCTTTCTC+TGG - chr4_4:78989263-78989282 Msa0706090:intron 35.0%
TTGCTGCTATTGGAAATAAG+TGG - chr4_4:78989332-78989351 Msa0706090:intron 35.0%
AAATAAACTTAGGGTGACGT+AGG - chr4_4:78989365-78989384 Msa0706090:intron 35.0%
AATAAACTTAGGGTGACGTA+GGG - chr4_4:78989366-78989385 Msa0706090:intron 35.0%
!! GCTTTTTATCGACATTGGTT+TGG - chr4_4:78989463-78989482 Msa0706090:intron 35.0%
CTTGTGAAACATACACAAGA+AGG - chr4_4:78989677-78989696 Msa0706090:intron 35.0%
CTGATCGTGCGTAATTAATT+GGG - chr4_4:78989819-78989838 Msa0706090:intron 35.0%
! TTTTCATGGTCAGGAATCAA+TGG - chr4_4:78990018-78990037 Msa0706090:CDS 35.0%
! TCTCTTTTGTTGGAATTGTG+TGG - chr4_4:78990223-78990242 Msa0706090:CDS 35.0%
! TCAAAACATGTTTTCCCCTA+TGG - chr4_4:78990287-78990306 Msa0706090:CDS 35.0%
TTGTTCTATCTAAGCCATAG+GGG + chr4_4:78990304-78990323 None:intergenic 35.0%
GTTGTTCTATCTAAGCCATA+GGG + chr4_4:78990305-78990324 None:intergenic 35.0%
AGTTGTTCTATCTAAGCCAT+AGG + chr4_4:78990306-78990325 None:intergenic 35.0%
! GTGTTGCAAAAGATTTTACC+AGG + chr4_4:78990358-78990377 None:intergenic 35.0%
TCATCAATGGGATATTTGAC+TGG + chr4_4:78990515-78990534 None:intergenic 35.0%
CTTCACCAATAGATCATCAA+TGG + chr4_4:78990528-78990547 None:intergenic 35.0%
TTAAAGTCTCTTGATGGAGA+AGG + chr4_4:78990584-78990603 None:intergenic 35.0%
GGAACATTAAAGTCTCTTGA+TGG + chr4_4:78990590-78990609 None:intergenic 35.0%
AATGTTCCAATGCATTGTGT+AGG - chr4_4:78990602-78990621 Msa0706090:intron 35.0%
ATGTTCCAATGCATTGTGTA+GGG - chr4_4:78990603-78990622 Msa0706090:intron 35.0%
TGAAAATGCAATCTGCCATA+AGG - chr4_4:78990703-78990722 Msa0706090:intron 35.0%
CGAGTTCTTATCAAAGATGA+CGG - chr4_4:78990770-78990789 Msa0706090:intron 35.0%
AAAAGCCATCTCATGAAATC+TGG + chr4_4:78990900-78990919 None:intergenic 35.0%
AGCAACAAGAAAGATTCAAC+TGG + chr4_4:78990924-78990943 None:intergenic 35.0%
GAATCTTTCTTGTTGCTATC+TGG - chr4_4:78990927-78990946 Msa0706090:intron 35.0%
CATCAATTAAGCAGTCACAA+AGG + chr4_4:78990956-78990975 None:intergenic 35.0%
CTATGAAGGAACCATAAAAC+GGG - chr4_4:78991098-78991117 Msa0706090:intron 35.0%
TATGAAGGAACCATAAAACG+GGG - chr4_4:78991099-78991118 Msa0706090:intron 35.0%
CCTGAAAATTGCAGTTTCAA+GGG + chr4_4:78991187-78991206 None:intergenic 35.0%
! CCTTGAAACTGCAATTTTCA+GGG - chr4_4:78991185-78991204 Msa0706090:intron 35.0%
!! TGCAATTTTCAGGGAAAAGT+TGG - chr4_4:78991194-78991213 Msa0706090:intron 35.0%
TGGATGAGTTTATTGAACAG+CGG - chr4_4:78991214-78991233 Msa0706090:intron 35.0%
AGAGAAGAGAACAAAAAGAG+AGG - chr4_4:78991286-78991305 Msa0706090:intron 35.0%
CATGTGGGGAAGAAAATAAA+TGG - chr4_4:78991393-78991412 Msa0706090:intron 35.0%
ATGGAGAGATAGAATCATCT+AGG - chr4_4:78991412-78991431 Msa0706090:intron 35.0%
AAGACAATTCACTGGGTAAA+AGG - chr4_4:78991436-78991455 Msa0706090:intron 35.0%
AATTCACTGGGTAAAAGGTA+AGG - chr4_4:78991441-78991460 Msa0706090:intron 35.0%
AAAACAGACTCCAAAAAACC+TGG - chr4_4:78991619-78991638 Msa0706090:intron 35.0%
AGAAGAATAGTATAGAGCAG+AGG - chr4_4:78991702-78991721 Msa0706090:intron 35.0%
GAAGAATAGTATAGAGCAGA+GGG - chr4_4:78991703-78991722 Msa0706090:intron 35.0%
CAACAATATAAGCAAGGAGA+TGG + chr4_4:78991740-78991759 None:intergenic 35.0%
AGAATACTTTGAACGAGAGA+TGG - chr4_4:78991805-78991824 Msa0706090:CDS 35.0%
ACCAATACCTATTGTAGTCT+CGG + chr4_4:78991868-78991887 None:intergenic 35.0%
! TGATAGCTTGATGCATTGAT+GGG - chr4_4:78992033-78992052 Msa0706090:intron 35.0%
AGTGACATATACATGCTTCT+CGG - chr4_4:78992238-78992257 Msa0706090:exon 35.0%
GCTAATTTATAGTGGTGTAG+AGG - chr4_4:78992404-78992423 Msa0706090:intron 35.0%
AATTTATAGTGGTGTAGAGG+AGG - chr4_4:78992407-78992426 Msa0706090:intron 35.0%
ATTTATAGTGGTGTAGAGGA+GGG - chr4_4:78992408-78992427 Msa0706090:intron 35.0%
AAAAATCTCCAGAAGTCAAG+GGG + chr4_4:78992635-78992654 None:intergenic 35.0%
CAAAAAATCTCCAGAAGTCA+AGG + chr4_4:78992637-78992656 None:intergenic 35.0%
AGAACTGCAGAAAAGATCAA+AGG - chr4_4:78992686-78992705 Msa0706090:intron 35.0%
! AACATATTTGAGGAAAGCAC+TGG + chr4_4:78992793-78992812 None:intergenic 35.0%
GAAGATTAACAATGGAAGCT+TGG - chr4_4:78992825-78992844 Msa0706090:intron 35.0%
! TGCAAGCCTTTTCAATATTG+TGG - chr4_4:78993062-78993081 Msa0706090:intron 35.0%
AGAAACATAAGCAAATCAGG+GGG + chr4_4:78993185-78993204 None:intergenic 35.0%
TCGAAGAATCTCATTAGGAA+TGG - chr4_4:78993213-78993232 Msa0706090:five_prime_UTR 35.0%
CGAAGAATCTCATTAGGAAT+GGG - chr4_4:78993214-78993233 Msa0706090:five_prime_UTR 35.0%
AATCTCATTAGGAATGGGAA+TGG - chr4_4:78993219-78993238 Msa0706090:five_prime_UTR 35.0%
!! TGGAAGAATTTGCTACATTC+AGG - chr4_4:78993280-78993299 Msa0706090:five_prime_UTR 35.0%
!! TTTTTCAACTGTTTCCGTTG+TGG - chr4_4:78985879-78985898 Msa0706090:three_prime_UTR 35.0%
AAGAAAACCCTAAAATGCGT+CGG + chr4_4:78986089-78986108 None:intergenic 35.0%
ATAAAAACTCCAACATCGCA+GGG + chr4_4:78986144-78986163 None:intergenic 35.0%
AATAAAAACTCCAACATCGC+AGG + chr4_4:78986145-78986164 None:intergenic 35.0%
! GGGTTTTTCGTATGAACATT+GGG - chr4_4:78986271-78986290 Msa0706090:intron 35.0%
! GAAACAAGTTTGGAATTGCA+TGG + chr4_4:78986471-78986490 None:intergenic 35.0%
! CTGATTGTTCTGAGTTTAAC+TGG - chr4_4:78986508-78986527 Msa0706090:intron 35.0%
! CTTTCTCAATGCCTCTTTTA+AGG - chr4_4:78986699-78986718 Msa0706090:intron 35.0%
AAAGGCTTTCTCCTTAAAAG+AGG + chr4_4:78986713-78986732 None:intergenic 35.0%
!! TCTTTTAAGGAGAAAGCCTT+TGG - chr4_4:78986712-78986731 Msa0706090:intron 35.0%
GACGAAGTATGAAATGCAAA+AGG + chr4_4:78986978-78986997 None:intergenic 35.0%
CAAATCATTTAACAGTCCTG+TGG + chr4_4:78987425-78987444 None:intergenic 35.0%
!!! GATTTGTTTTGATCCCACAA+TGG - chr4_4:78987439-78987458 Msa0706090:intron 35.0%
!! CTCGTTTTTGAATACCATTG+TGG + chr4_4:78987456-78987475 None:intergenic 35.0%
CAATGGTATTCAAAAACGAG+AGG - chr4_4:78987456-78987475 Msa0706090:intron 35.0%
!! GGGTTCTTATTTAGTTTGGA+CGG - chr4_4:78987517-78987536 Msa0706090:CDS 35.0%
!! GGTTCTTATTTAGTTTGGAC+GGG - chr4_4:78987518-78987537 Msa0706090:CDS 35.0%
TTACAGAGACCAAATTGACA+TGG - chr4_4:78988300-78988319 Msa0706090:CDS 35.0%
AACTCCAAACCATGTCAATT+TGG + chr4_4:78988312-78988331 None:intergenic 35.0%
! TTGTCGTTTACAGTTCCTAA+AGG + chr4_4:78988373-78988392 None:intergenic 35.0%
GCATGTACCTATTCAAAAAC+AGG + chr4_4:78988404-78988423 None:intergenic 35.0%
ATAGGTACATGCAAATGATC+TGG - chr4_4:78988412-78988431 Msa0706090:CDS 35.0%
TTCTCTTGCTGAAAAATTGC+AGG - chr4_4:78988567-78988586 Msa0706090:intron 35.0%
! ATACTCTAAAGGCTTTCATC+CGG - chr4_4:78988788-78988807 Msa0706090:intron 35.0%
TTTGTCATGTAAAACCCAAG+GGG + chr4_4:78988833-78988852 None:intergenic 35.0%
GTTTGTCATGTAAAACCCAA+GGG + chr4_4:78988834-78988853 None:intergenic 35.0%
AGTTTGTCATGTAAAACCCA+AGG + chr4_4:78988835-78988854 None:intergenic 35.0%
! TTGGGTTTTACATGACAAAC+TGG - chr4_4:78988834-78988853 Msa0706090:intron 35.0%
! GGAAAGGTTTTTCTCAAAGA+CGG - chr4_4:78988901-78988920 Msa0706090:intron 35.0%
CTCCAAGAAAAGGAATAATG+AGG - chr4_4:78988936-78988955 Msa0706090:intron 35.0%
TGTTCGTGATTCACAATCTA+GGG + chr4_4:78989092-78989111 None:intergenic 35.0%
TTGTTCGTGATTCACAATCT+AGG + chr4_4:78989093-78989112 None:intergenic 35.0%
!!! GACCAATTTTTTGCTTTCTC+TGG - chr4_4:78989263-78989282 Msa0706090:intron 35.0%
TTGCTGCTATTGGAAATAAG+TGG - chr4_4:78989332-78989351 Msa0706090:intron 35.0%
AAATAAACTTAGGGTGACGT+AGG - chr4_4:78989365-78989384 Msa0706090:intron 35.0%
AATAAACTTAGGGTGACGTA+GGG - chr4_4:78989366-78989385 Msa0706090:intron 35.0%
!! GCTTTTTATCGACATTGGTT+TGG - chr4_4:78989463-78989482 Msa0706090:intron 35.0%
CTTGTGAAACATACACAAGA+AGG - chr4_4:78989677-78989696 Msa0706090:intron 35.0%
CTGATCGTGCGTAATTAATT+GGG - chr4_4:78989819-78989838 Msa0706090:intron 35.0%
! TTTTCATGGTCAGGAATCAA+TGG - chr4_4:78990018-78990037 Msa0706090:CDS 35.0%
! TCTCTTTTGTTGGAATTGTG+TGG - chr4_4:78990223-78990242 Msa0706090:CDS 35.0%
! TCAAAACATGTTTTCCCCTA+TGG - chr4_4:78990287-78990306 Msa0706090:CDS 35.0%
TTGTTCTATCTAAGCCATAG+GGG + chr4_4:78990304-78990323 None:intergenic 35.0%
GTTGTTCTATCTAAGCCATA+GGG + chr4_4:78990305-78990324 None:intergenic 35.0%
AGTTGTTCTATCTAAGCCAT+AGG + chr4_4:78990306-78990325 None:intergenic 35.0%
! GTGTTGCAAAAGATTTTACC+AGG + chr4_4:78990358-78990377 None:intergenic 35.0%
TCATCAATGGGATATTTGAC+TGG + chr4_4:78990515-78990534 None:intergenic 35.0%
CTTCACCAATAGATCATCAA+TGG + chr4_4:78990528-78990547 None:intergenic 35.0%
TTAAAGTCTCTTGATGGAGA+AGG + chr4_4:78990584-78990603 None:intergenic 35.0%
GGAACATTAAAGTCTCTTGA+TGG + chr4_4:78990590-78990609 None:intergenic 35.0%
AATGTTCCAATGCATTGTGT+AGG - chr4_4:78990602-78990621 Msa0706090:intron 35.0%
ATGTTCCAATGCATTGTGTA+GGG - chr4_4:78990603-78990622 Msa0706090:intron 35.0%
TGAAAATGCAATCTGCCATA+AGG - chr4_4:78990703-78990722 Msa0706090:intron 35.0%
CGAGTTCTTATCAAAGATGA+CGG - chr4_4:78990770-78990789 Msa0706090:intron 35.0%
AAAAGCCATCTCATGAAATC+TGG + chr4_4:78990900-78990919 None:intergenic 35.0%
AGCAACAAGAAAGATTCAAC+TGG + chr4_4:78990924-78990943 None:intergenic 35.0%
GAATCTTTCTTGTTGCTATC+TGG - chr4_4:78990927-78990946 Msa0706090:intron 35.0%
CATCAATTAAGCAGTCACAA+AGG + chr4_4:78990956-78990975 None:intergenic 35.0%
CTATGAAGGAACCATAAAAC+GGG - chr4_4:78991098-78991117 Msa0706090:intron 35.0%
TATGAAGGAACCATAAAACG+GGG - chr4_4:78991099-78991118 Msa0706090:intron 35.0%
CCTGAAAATTGCAGTTTCAA+GGG + chr4_4:78991187-78991206 None:intergenic 35.0%
! CCTTGAAACTGCAATTTTCA+GGG - chr4_4:78991185-78991204 Msa0706090:intron 35.0%
!! TGCAATTTTCAGGGAAAAGT+TGG - chr4_4:78991194-78991213 Msa0706090:intron 35.0%
TGGATGAGTTTATTGAACAG+CGG - chr4_4:78991214-78991233 Msa0706090:intron 35.0%
AGAGAAGAGAACAAAAAGAG+AGG - chr4_4:78991286-78991305 Msa0706090:intron 35.0%
CATGTGGGGAAGAAAATAAA+TGG - chr4_4:78991393-78991412 Msa0706090:intron 35.0%
ATGGAGAGATAGAATCATCT+AGG - chr4_4:78991412-78991431 Msa0706090:intron 35.0%
AAGACAATTCACTGGGTAAA+AGG - chr4_4:78991436-78991455 Msa0706090:intron 35.0%
AATTCACTGGGTAAAAGGTA+AGG - chr4_4:78991441-78991460 Msa0706090:intron 35.0%
AAAACAGACTCCAAAAAACC+TGG - chr4_4:78991619-78991638 Msa0706090:intron 35.0%
AGAAGAATAGTATAGAGCAG+AGG - chr4_4:78991702-78991721 Msa0706090:intron 35.0%
GAAGAATAGTATAGAGCAGA+GGG - chr4_4:78991703-78991722 Msa0706090:intron 35.0%
CAACAATATAAGCAAGGAGA+TGG + chr4_4:78991740-78991759 None:intergenic 35.0%
AGAATACTTTGAACGAGAGA+TGG - chr4_4:78991805-78991824 Msa0706090:CDS 35.0%
ACCAATACCTATTGTAGTCT+CGG + chr4_4:78991868-78991887 None:intergenic 35.0%
! TGATAGCTTGATGCATTGAT+GGG - chr4_4:78992033-78992052 Msa0706090:intron 35.0%
AGTGACATATACATGCTTCT+CGG - chr4_4:78992238-78992257 Msa0706090:exon 35.0%
GCTAATTTATAGTGGTGTAG+AGG - chr4_4:78992404-78992423 Msa0706090:intron 35.0%
AATTTATAGTGGTGTAGAGG+AGG - chr4_4:78992407-78992426 Msa0706090:intron 35.0%
ATTTATAGTGGTGTAGAGGA+GGG - chr4_4:78992408-78992427 Msa0706090:intron 35.0%
AAAAATCTCCAGAAGTCAAG+GGG + chr4_4:78992635-78992654 None:intergenic 35.0%
CAAAAAATCTCCAGAAGTCA+AGG + chr4_4:78992637-78992656 None:intergenic 35.0%
AGAACTGCAGAAAAGATCAA+AGG - chr4_4:78992686-78992705 Msa0706090:intron 35.0%
! AACATATTTGAGGAAAGCAC+TGG + chr4_4:78992793-78992812 None:intergenic 35.0%
GAAGATTAACAATGGAAGCT+TGG - chr4_4:78992825-78992844 Msa0706090:intron 35.0%
! TGCAAGCCTTTTCAATATTG+TGG - chr4_4:78993062-78993081 Msa0706090:intron 35.0%
AGAAACATAAGCAAATCAGG+GGG + chr4_4:78993185-78993204 None:intergenic 35.0%
TCGAAGAATCTCATTAGGAA+TGG - chr4_4:78993213-78993232 Msa0706090:five_prime_UTR 35.0%
CGAAGAATCTCATTAGGAAT+GGG - chr4_4:78993214-78993233 Msa0706090:five_prime_UTR 35.0%
AATCTCATTAGGAATGGGAA+TGG - chr4_4:78993219-78993238 Msa0706090:five_prime_UTR 35.0%
!! TGGAAGAATTTGCTACATTC+AGG - chr4_4:78993280-78993299 Msa0706090:five_prime_UTR 35.0%
AACGTGAGAAAGTTCTCTCT+CGG - chr4_4:78985687-78985706 Msa0706090:three_prime_UTR 40.0%
TGAAGAAGTTGTTGAATGCG+TGG + chr4_4:78985762-78985781 None:intergenic 40.0%
! TCCATAACCGACGCATTTTA+GGG - chr4_4:78986079-78986098 Msa0706090:three_prime_UTR 40.0%
! GGGGTTTTTCGTATGAACAT+TGG - chr4_4:78986270-78986289 Msa0706090:intron 40.0%
ACTTGGTAAACATGCTCATC+TGG + chr4_4:78986767-78986786 None:intergenic 40.0%
TCGTAGAAAAGCAGAGGATA+TGG - chr4_4:78986996-78987015 Msa0706090:CDS 40.0%
AGAAAAGCAGAGGATATGGA+TGG - chr4_4:78987000-78987019 Msa0706090:CDS 40.0%
TTTGAATCTATACCGCCAGA+GGG - chr4_4:78987058-78987077 Msa0706090:CDS 40.0%
TGTAAGGTCACTGGAAAAAC+TGG - chr4_4:78987089-78987108 Msa0706090:CDS 40.0%
!! AACTGGCTTGACTTATGAAG+AGG - chr4_4:78987106-78987125 Msa0706090:CDS 40.0%
! GCAGGAGTCATGAATTCTTT+TGG + chr4_4:78987176-78987195 None:intergenic 40.0%
TCGAGCAGGACAAAAAGAAA+TGG + chr4_4:78987274-78987293 None:intergenic 40.0%
ATGTGCGGTAGTTAATGACA+AGG - chr4_4:78987311-78987330 Msa0706090:CDS 40.0%
TGTGCGGTAGTTAATGACAA+GGG - chr4_4:78987312-78987331 Msa0706090:CDS 40.0%
AATGCCTGTTTCAGAACACA+TGG - chr4_4:78987352-78987371 Msa0706090:intron 40.0%
ACACATCTGTTTAATCCCAC+AGG - chr4_4:78987406-78987425 Msa0706090:intron 40.0%
CAGGAAGCAAAGTGAAAACA+AGG - chr4_4:78987637-78987656 Msa0706090:CDS 40.0%
GGACTACATTGAAGATGAGT+TGG - chr4_4:78987841-78987860 Msa0706090:CDS 40.0%
TGATTGCATTAGACATCGGT+AGG - chr4_4:78987925-78987944 Msa0706090:intron 40.0%
CAATTGTCAGATACCACTGA+AGG - chr4_4:78988077-78988096 Msa0706090:intron 40.0%
TTTGGTCTCTGTAAGTGCTA+CGG + chr4_4:78988294-78988313 None:intergenic 40.0%
GAGACCAAATTGACATGGTT+TGG - chr4_4:78988305-78988324 Msa0706090:CDS 40.0%
TTTGTTGGTGCGGAATTGTA+TGG - chr4_4:78988598-78988617 Msa0706090:intron 40.0%
TTGTTGGTGCGGAATTGTAT+GGG - chr4_4:78988599-78988618 Msa0706090:intron 40.0%
AGCCGATAAATACCGTTATG+AGG - chr4_4:78988675-78988694 Msa0706090:intron 40.0%
AATACCGTTATGAGGTAGCT+TGG - chr4_4:78988683-78988702 Msa0706090:intron 40.0%
AGAAGTCCATGCAGAAGATT+TGG - chr4_4:78988738-78988757 Msa0706090:intron 40.0%
! TACTCTAAAGGCTTTCATCC+GGG - chr4_4:78988789-78988808 Msa0706090:intron 40.0%
CATTTCGATAGGTAGATTCC+CGG + chr4_4:78988810-78988829 None:intergenic 40.0%
GACAAACTGGCACAAAATCA+TGG - chr4_4:78988847-78988866 Msa0706090:CDS 40.0%
TCTTAACTCCTCAGGAACAT+CGG + chr4_4:78988881-78988900 None:intergenic 40.0%
ATGGATATGGCTGCATATTC+TGG + chr4_4:78989191-78989210 None:intergenic 40.0%
AATATGCAGCCATATCCATG+TGG - chr4_4:78989192-78989211 Msa0706090:intron 40.0%
AACACAGGATGTGCATGATA+AGG + chr4_4:78989221-78989240 None:intergenic 40.0%
GCGAACAGATATCTTAACAC+AGG + chr4_4:78989236-78989255 None:intergenic 40.0%
AGCAAAAAATTGGTCGTGCA+AGG + chr4_4:78989258-78989277 None:intergenic 40.0%
GGCCAGAGAAAGCAAAAAAT+TGG + chr4_4:78989268-78989287 None:intergenic 40.0%
! TTTCTTCTTCGAAGGTGTGA+TGG + chr4_4:78989289-78989308 None:intergenic 40.0%
ATCACACCTTCGAAGAAGAA+AGG - chr4_4:78989288-78989307 Msa0706090:intron 40.0%
TCACACCTTCGAAGAAGAAA+GGG - chr4_4:78989289-78989308 Msa0706090:intron 40.0%
GCTATTGGAAATAAGTGGCA+TGG - chr4_4:78989337-78989356 Msa0706090:intron 40.0%
ATAAACTTAGGGTGACGTAG+GGG - chr4_4:78989367-78989386 Msa0706090:intron 40.0%
!!! GCTCTGCTTTTTATCGACAT+TGG - chr4_4:78989458-78989477 Msa0706090:intron 40.0%
AATCTATAATTGGGCCTCCA+TGG + chr4_4:78989501-78989520 None:intergenic 40.0%
GACGAAGTCTAAAGAGATGA+GGG + chr4_4:78989619-78989638 None:intergenic 40.0%
TGTATGTTTCACAAGTGCGA+GGG + chr4_4:78989672-78989691 None:intergenic 40.0%
ATACACAAGAAGGTGAGAGT+AGG - chr4_4:78989687-78989706 Msa0706090:intron 40.0%
!!! TTTCTTTTGGTTTGCGATCC+TGG - chr4_4:78989777-78989796 Msa0706090:intron 40.0%
TAATTACGCACGATCAGGAA+GGG + chr4_4:78989816-78989835 None:intergenic 40.0%
TTAATTACGCACGATCAGGA+AGG + chr4_4:78989817-78989836 None:intergenic 40.0%
CCAATTAATTACGCACGATC+AGG + chr4_4:78989821-78989840 None:intergenic 40.0%
CCTGATCGTGCGTAATTAAT+TGG - chr4_4:78989818-78989837 Msa0706090:intron 40.0%
TGGGTAAGATTTCAAGATCC+TGG - chr4_4:78989838-78989857 Msa0706090:intron 40.0%
ATCTTGCTTAAGATCGAGAG+GGG + chr4_4:78989884-78989903 None:intergenic 40.0%
GATCTTGCTTAAGATCGAGA+GGG + chr4_4:78989885-78989904 None:intergenic 40.0%
AGATCTTGCTTAAGATCGAG+AGG + chr4_4:78989886-78989905 None:intergenic 40.0%
! AATGGTTCTGCACAAGAGAA+AGG - chr4_4:78990088-78990107 Msa0706090:CDS 40.0%
ACAAAAGAGAAAAGCAGCGA+TGG + chr4_4:78990213-78990232 None:intergenic 40.0%
!!! TCGCTGCTTTTCTCTTTTGT+TGG - chr4_4:78990213-78990232 Msa0706090:CDS 40.0%
TTTGTTGGAATTGTGTGGCA+TGG - chr4_4:78990228-78990247 Msa0706090:CDS 40.0%
TCCAGAACATGAAGAACACA+AGG - chr4_4:78990484-78990503 Msa0706090:intron 40.0%
TCCTTGTGTTCTTCATGTTC+TGG + chr4_4:78990488-78990507 None:intergenic 40.0%
AAGGACGATCAGTGAAAACA+GGG + chr4_4:78990565-78990584 None:intergenic 40.0%
AGATTCCCTACACAATGCAT+TGG + chr4_4:78990611-78990630 None:intergenic 40.0%
AATGCAATCTGCCATAAGGA+TGG - chr4_4:78990707-78990726 Msa0706090:intron 40.0%
ATGCAATCTGCCATAAGGAT+GGG - chr4_4:78990708-78990727 Msa0706090:intron 40.0%
ACAGAAACGAAGTGTGAAGA+AGG - chr4_4:78990811-78990830 Msa0706090:intron 40.0%
GATGTCCAGATTTCATGAGA+TGG - chr4_4:78990892-78990911 Msa0706090:intron 40.0%
! GCAATAATGTCCCCGTTTTA+TGG + chr4_4:78991112-78991131 None:intergenic 40.0%
!! GTTTAGCATTGGCATCTACA+AGG + chr4_4:78991134-78991153 None:intergenic 40.0%
! CCCTTGAAACTGCAATTTTC+AGG - chr4_4:78991184-78991203 Msa0706090:intron 40.0%
CCCTGAAAATTGCAGTTTCA+AGG + chr4_4:78991188-78991207 None:intergenic 40.0%
! TAGTGCTTGTTCCCTTTTAG+AGG + chr4_4:78991253-78991272 None:intergenic 40.0%
! AAAGCTGACTCAGAAAGCAA+TGG - chr4_4:78991312-78991331 Msa0706090:intron 40.0%
! AAGCTGACTCAGAAAGCAAT+GGG - chr4_4:78991313-78991332 Msa0706090:intron 40.0%
AGCAATGGGAATCATCTCAA+CGG - chr4_4:78991327-78991346 Msa0706090:intron 40.0%
ATCTAGGCAAGACAATTCAC+TGG - chr4_4:78991428-78991447 Msa0706090:intron 40.0%
TCTAGGCAAGACAATTCACT+GGG - chr4_4:78991429-78991448 Msa0706090:intron 40.0%
!!! TTGGAGTCTGTTTTGAAGCA+GGG + chr4_4:78991613-78991632 None:intergenic 40.0%
!!! TTTGGAGTCTGTTTTGAAGC+AGG + chr4_4:78991614-78991633 None:intergenic 40.0%
CTGAAAGAACCAGCAGAAAA+TGG - chr4_4:78991650-78991669 Msa0706090:intron 40.0%
!! CCTAATGGGCTTCTACTAAT+AGG + chr4_4:78991839-78991858 None:intergenic 40.0%
CCTATTAGTAGAAGCCCATT+AGG - chr4_4:78991836-78991855 Msa0706090:CDS 40.0%
AGTCTCGGTCTTTACCTAAT+GGG + chr4_4:78991853-78991872 None:intergenic 40.0%
TAGTCTCGGTCTTTACCTAA+TGG + chr4_4:78991854-78991873 None:intergenic 40.0%
GTAAAGACCGAGACTACAAT+AGG - chr4_4:78991858-78991877 Msa0706090:CDS 40.0%
ACCGAGACTACAATAGGTAT+TGG - chr4_4:78991864-78991883 Msa0706090:CDS 40.0%
!! GAGACTACAATAGGTATTGG+TGG - chr4_4:78991867-78991886 Msa0706090:CDS 40.0%
GTGATAGCTTGATGCATTGA+TGG - chr4_4:78992032-78992051 Msa0706090:intron 40.0%
GTGACATATACATGCTTCTC+GGG - chr4_4:78992239-78992258 Msa0706090:exon 40.0%
TAGAATTTACCCTCATCCTC+TGG - chr4_4:78992334-78992353 Msa0706090:intron 40.0%
TATAGTCAACCAGAGGATGA+GGG + chr4_4:78992346-78992365 None:intergenic 40.0%
!! CTGTTTCTATAGTCAACCAG+AGG + chr4_4:78992353-78992372 None:intergenic 40.0%
CTCTGGTTGACTATAGAAAC+AGG - chr4_4:78992351-78992370 Msa0706090:intron 40.0%
AAAATCTCCAGAAGTCAAGG+GGG + chr4_4:78992634-78992653 None:intergenic 40.0%
CGCTTGTACATCATCCAAAA+TGG + chr4_4:78992901-78992920 None:intergenic 40.0%
CTTGCACCATTCTTCAATCA+TGG - chr4_4:78992952-78992971 Msa0706090:intron 40.0%
!! TGTGATGCGCATTGATTGTT+TGG - chr4_4:78993092-78993111 Msa0706090:intron 40.0%
! GTTGTGTGCTGATATTGTAG+TGG - chr4_4:78993114-78993133 Msa0706090:intron 40.0%
GGGAAGCTACAATATGAGTA+TGG - chr4_4:78993151-78993170 Msa0706090:intron 40.0%
!! AGGCATCGAAGAATCTCATT+AGG - chr4_4:78993208-78993227 Msa0706090:five_prime_UTR 40.0%
!! AATTTGCTACATTCAGGCCA+TGG - chr4_4:78993286-78993305 Msa0706090:five_prime_UTR 40.0%
! ATTTGCTACATTCAGGCCAT+GGG - chr4_4:78993287-78993306 Msa0706090:five_prime_UTR 40.0%
AACGTGAGAAAGTTCTCTCT+CGG - chr4_4:78985687-78985706 Msa0706090:three_prime_UTR 40.0%
TGAAGAAGTTGTTGAATGCG+TGG + chr4_4:78985762-78985781 None:intergenic 40.0%
! TCCATAACCGACGCATTTTA+GGG - chr4_4:78986079-78986098 Msa0706090:three_prime_UTR 40.0%
! GGGGTTTTTCGTATGAACAT+TGG - chr4_4:78986270-78986289 Msa0706090:intron 40.0%
ACTTGGTAAACATGCTCATC+TGG + chr4_4:78986767-78986786 None:intergenic 40.0%
TCGTAGAAAAGCAGAGGATA+TGG - chr4_4:78986996-78987015 Msa0706090:CDS 40.0%
AGAAAAGCAGAGGATATGGA+TGG - chr4_4:78987000-78987019 Msa0706090:CDS 40.0%
TTTGAATCTATACCGCCAGA+GGG - chr4_4:78987058-78987077 Msa0706090:CDS 40.0%
TGTAAGGTCACTGGAAAAAC+TGG - chr4_4:78987089-78987108 Msa0706090:CDS 40.0%
!! AACTGGCTTGACTTATGAAG+AGG - chr4_4:78987106-78987125 Msa0706090:CDS 40.0%
! GCAGGAGTCATGAATTCTTT+TGG + chr4_4:78987176-78987195 None:intergenic 40.0%
TCGAGCAGGACAAAAAGAAA+TGG + chr4_4:78987274-78987293 None:intergenic 40.0%
ATGTGCGGTAGTTAATGACA+AGG - chr4_4:78987311-78987330 Msa0706090:CDS 40.0%
TGTGCGGTAGTTAATGACAA+GGG - chr4_4:78987312-78987331 Msa0706090:CDS 40.0%
AATGCCTGTTTCAGAACACA+TGG - chr4_4:78987352-78987371 Msa0706090:intron 40.0%
ACACATCTGTTTAATCCCAC+AGG - chr4_4:78987406-78987425 Msa0706090:intron 40.0%
CAGGAAGCAAAGTGAAAACA+AGG - chr4_4:78987637-78987656 Msa0706090:CDS 40.0%
GGACTACATTGAAGATGAGT+TGG - chr4_4:78987841-78987860 Msa0706090:CDS 40.0%
TGATTGCATTAGACATCGGT+AGG - chr4_4:78987925-78987944 Msa0706090:intron 40.0%
CAATTGTCAGATACCACTGA+AGG - chr4_4:78988077-78988096 Msa0706090:intron 40.0%
TTTGGTCTCTGTAAGTGCTA+CGG + chr4_4:78988294-78988313 None:intergenic 40.0%
GAGACCAAATTGACATGGTT+TGG - chr4_4:78988305-78988324 Msa0706090:CDS 40.0%
TTTGTTGGTGCGGAATTGTA+TGG - chr4_4:78988598-78988617 Msa0706090:intron 40.0%
TTGTTGGTGCGGAATTGTAT+GGG - chr4_4:78988599-78988618 Msa0706090:intron 40.0%
AGCCGATAAATACCGTTATG+AGG - chr4_4:78988675-78988694 Msa0706090:intron 40.0%
AATACCGTTATGAGGTAGCT+TGG - chr4_4:78988683-78988702 Msa0706090:intron 40.0%
AGAAGTCCATGCAGAAGATT+TGG - chr4_4:78988738-78988757 Msa0706090:intron 40.0%
! TACTCTAAAGGCTTTCATCC+GGG - chr4_4:78988789-78988808 Msa0706090:intron 40.0%
CATTTCGATAGGTAGATTCC+CGG + chr4_4:78988810-78988829 None:intergenic 40.0%
GACAAACTGGCACAAAATCA+TGG - chr4_4:78988847-78988866 Msa0706090:CDS 40.0%
TCTTAACTCCTCAGGAACAT+CGG + chr4_4:78988881-78988900 None:intergenic 40.0%
ATGGATATGGCTGCATATTC+TGG + chr4_4:78989191-78989210 None:intergenic 40.0%
AATATGCAGCCATATCCATG+TGG - chr4_4:78989192-78989211 Msa0706090:intron 40.0%
AACACAGGATGTGCATGATA+AGG + chr4_4:78989221-78989240 None:intergenic 40.0%
GCGAACAGATATCTTAACAC+AGG + chr4_4:78989236-78989255 None:intergenic 40.0%
AGCAAAAAATTGGTCGTGCA+AGG + chr4_4:78989258-78989277 None:intergenic 40.0%
GGCCAGAGAAAGCAAAAAAT+TGG + chr4_4:78989268-78989287 None:intergenic 40.0%
! TTTCTTCTTCGAAGGTGTGA+TGG + chr4_4:78989289-78989308 None:intergenic 40.0%
ATCACACCTTCGAAGAAGAA+AGG - chr4_4:78989288-78989307 Msa0706090:intron 40.0%
TCACACCTTCGAAGAAGAAA+GGG - chr4_4:78989289-78989308 Msa0706090:intron 40.0%
GCTATTGGAAATAAGTGGCA+TGG - chr4_4:78989337-78989356 Msa0706090:intron 40.0%
ATAAACTTAGGGTGACGTAG+GGG - chr4_4:78989367-78989386 Msa0706090:intron 40.0%
!!! GCTCTGCTTTTTATCGACAT+TGG - chr4_4:78989458-78989477 Msa0706090:intron 40.0%
AATCTATAATTGGGCCTCCA+TGG + chr4_4:78989501-78989520 None:intergenic 40.0%
GACGAAGTCTAAAGAGATGA+GGG + chr4_4:78989619-78989638 None:intergenic 40.0%
TGTATGTTTCACAAGTGCGA+GGG + chr4_4:78989672-78989691 None:intergenic 40.0%
ATACACAAGAAGGTGAGAGT+AGG - chr4_4:78989687-78989706 Msa0706090:intron 40.0%
!!! TTTCTTTTGGTTTGCGATCC+TGG - chr4_4:78989777-78989796 Msa0706090:intron 40.0%
TAATTACGCACGATCAGGAA+GGG + chr4_4:78989816-78989835 None:intergenic 40.0%
TTAATTACGCACGATCAGGA+AGG + chr4_4:78989817-78989836 None:intergenic 40.0%
CCAATTAATTACGCACGATC+AGG + chr4_4:78989821-78989840 None:intergenic 40.0%
CCTGATCGTGCGTAATTAAT+TGG - chr4_4:78989818-78989837 Msa0706090:intron 40.0%
TGGGTAAGATTTCAAGATCC+TGG - chr4_4:78989838-78989857 Msa0706090:intron 40.0%
ATCTTGCTTAAGATCGAGAG+GGG + chr4_4:78989884-78989903 None:intergenic 40.0%
GATCTTGCTTAAGATCGAGA+GGG + chr4_4:78989885-78989904 None:intergenic 40.0%
AGATCTTGCTTAAGATCGAG+AGG + chr4_4:78989886-78989905 None:intergenic 40.0%
! AATGGTTCTGCACAAGAGAA+AGG - chr4_4:78990088-78990107 Msa0706090:CDS 40.0%
ACAAAAGAGAAAAGCAGCGA+TGG + chr4_4:78990213-78990232 None:intergenic 40.0%
!!! TCGCTGCTTTTCTCTTTTGT+TGG - chr4_4:78990213-78990232 Msa0706090:CDS 40.0%
TTTGTTGGAATTGTGTGGCA+TGG - chr4_4:78990228-78990247 Msa0706090:CDS 40.0%
TCCAGAACATGAAGAACACA+AGG - chr4_4:78990484-78990503 Msa0706090:intron 40.0%
TCCTTGTGTTCTTCATGTTC+TGG + chr4_4:78990488-78990507 None:intergenic 40.0%
AAGGACGATCAGTGAAAACA+GGG + chr4_4:78990565-78990584 None:intergenic 40.0%
AGATTCCCTACACAATGCAT+TGG + chr4_4:78990611-78990630 None:intergenic 40.0%
AATGCAATCTGCCATAAGGA+TGG - chr4_4:78990707-78990726 Msa0706090:intron 40.0%
ATGCAATCTGCCATAAGGAT+GGG - chr4_4:78990708-78990727 Msa0706090:intron 40.0%
ACAGAAACGAAGTGTGAAGA+AGG - chr4_4:78990811-78990830 Msa0706090:intron 40.0%
GATGTCCAGATTTCATGAGA+TGG - chr4_4:78990892-78990911 Msa0706090:intron 40.0%
! GCAATAATGTCCCCGTTTTA+TGG + chr4_4:78991112-78991131 None:intergenic 40.0%
!! GTTTAGCATTGGCATCTACA+AGG + chr4_4:78991134-78991153 None:intergenic 40.0%
! CCCTTGAAACTGCAATTTTC+AGG - chr4_4:78991184-78991203 Msa0706090:intron 40.0%
CCCTGAAAATTGCAGTTTCA+AGG + chr4_4:78991188-78991207 None:intergenic 40.0%
! TAGTGCTTGTTCCCTTTTAG+AGG + chr4_4:78991253-78991272 None:intergenic 40.0%
! AAAGCTGACTCAGAAAGCAA+TGG - chr4_4:78991312-78991331 Msa0706090:intron 40.0%
! AAGCTGACTCAGAAAGCAAT+GGG - chr4_4:78991313-78991332 Msa0706090:intron 40.0%
AGCAATGGGAATCATCTCAA+CGG - chr4_4:78991327-78991346 Msa0706090:intron 40.0%
ATCTAGGCAAGACAATTCAC+TGG - chr4_4:78991428-78991447 Msa0706090:intron 40.0%
TCTAGGCAAGACAATTCACT+GGG - chr4_4:78991429-78991448 Msa0706090:intron 40.0%
!!! TTGGAGTCTGTTTTGAAGCA+GGG + chr4_4:78991613-78991632 None:intergenic 40.0%
!!! TTTGGAGTCTGTTTTGAAGC+AGG + chr4_4:78991614-78991633 None:intergenic 40.0%
CTGAAAGAACCAGCAGAAAA+TGG - chr4_4:78991650-78991669 Msa0706090:intron 40.0%
!! CCTAATGGGCTTCTACTAAT+AGG + chr4_4:78991839-78991858 None:intergenic 40.0%
CCTATTAGTAGAAGCCCATT+AGG - chr4_4:78991836-78991855 Msa0706090:CDS 40.0%
AGTCTCGGTCTTTACCTAAT+GGG + chr4_4:78991853-78991872 None:intergenic 40.0%
TAGTCTCGGTCTTTACCTAA+TGG + chr4_4:78991854-78991873 None:intergenic 40.0%
GTAAAGACCGAGACTACAAT+AGG - chr4_4:78991858-78991877 Msa0706090:CDS 40.0%
ACCGAGACTACAATAGGTAT+TGG - chr4_4:78991864-78991883 Msa0706090:CDS 40.0%
!! GAGACTACAATAGGTATTGG+TGG - chr4_4:78991867-78991886 Msa0706090:CDS 40.0%
GTGATAGCTTGATGCATTGA+TGG - chr4_4:78992032-78992051 Msa0706090:intron 40.0%
GTGACATATACATGCTTCTC+GGG - chr4_4:78992239-78992258 Msa0706090:exon 40.0%
TAGAATTTACCCTCATCCTC+TGG - chr4_4:78992334-78992353 Msa0706090:intron 40.0%
TATAGTCAACCAGAGGATGA+GGG + chr4_4:78992346-78992365 None:intergenic 40.0%
!! CTGTTTCTATAGTCAACCAG+AGG + chr4_4:78992353-78992372 None:intergenic 40.0%
CTCTGGTTGACTATAGAAAC+AGG - chr4_4:78992351-78992370 Msa0706090:intron 40.0%
AAAATCTCCAGAAGTCAAGG+GGG + chr4_4:78992634-78992653 None:intergenic 40.0%
CGCTTGTACATCATCCAAAA+TGG + chr4_4:78992901-78992920 None:intergenic 40.0%
CTTGCACCATTCTTCAATCA+TGG - chr4_4:78992952-78992971 Msa0706090:intron 40.0%
!! TGTGATGCGCATTGATTGTT+TGG - chr4_4:78993092-78993111 Msa0706090:intron 40.0%
! GTTGTGTGCTGATATTGTAG+TGG - chr4_4:78993114-78993133 Msa0706090:intron 40.0%
GGGAAGCTACAATATGAGTA+TGG - chr4_4:78993151-78993170 Msa0706090:intron 40.0%
!! AGGCATCGAAGAATCTCATT+AGG - chr4_4:78993208-78993227 Msa0706090:five_prime_UTR 40.0%
!! AATTTGCTACATTCAGGCCA+TGG - chr4_4:78993286-78993305 Msa0706090:five_prime_UTR 40.0%
! ATTTGCTACATTCAGGCCAT+GGG - chr4_4:78993287-78993306 Msa0706090:five_prime_UTR 40.0%
ACGTGAGAAAGTTCTCTCTC+GGG - chr4_4:78985688-78985707 Msa0706090:three_prime_UTR 45.0%
TTCAACTGTTTCCGTTGTGG+CGG - chr4_4:78985882-78985901 Msa0706090:three_prime_UTR 45.0%
AAAATAGGTTCCCGCCACAA+CGG + chr4_4:78985896-78985915 None:intergenic 45.0%
ACGAAGAAACTACCGACGAA+GGG + chr4_4:78985987-78986006 None:intergenic 45.0%
! CTCCATAACCGACGCATTTT+AGG - chr4_4:78986078-78986097 Msa0706090:three_prime_UTR 45.0%
!! ACCCTAAAATGCGTCGGTTA+TGG + chr4_4:78986083-78986102 None:intergenic 45.0%
GTCTTTATACCCTGCGATGT+TGG - chr4_4:78986132-78986151 Msa0706090:CDS 45.0%
CAGTACAGAACAACACGATC+AGG + chr4_4:78986325-78986344 None:intergenic 45.0%
! AAGGAGAAAGCCTTTGGCTT+TGG - chr4_4:78986718-78986737 Msa0706090:intron 45.0%
! TCATCTGGCTTCAAATCCTC+AGG + chr4_4:78986752-78986771 None:intergenic 45.0%
ACTTCGTCGTAGAAAAGCAG+AGG - chr4_4:78986990-78987009 Msa0706090:CDS 45.0%
GTTTGAATCTATACCGCCAG+AGG - chr4_4:78987057-78987076 Msa0706090:CDS 45.0%
GTTTGGTCATGTAAGGTCAC+TGG - chr4_4:78987080-78987099 Msa0706090:CDS 45.0%
GTCTATACAATCACTCGAGC+AGG + chr4_4:78987288-78987307 None:intergenic 45.0%
!! CCATCCATGTGTTCTGAAAC+AGG + chr4_4:78987359-78987378 None:intergenic 45.0%
CCTGTTTCAGAACACATGGA+TGG - chr4_4:78987356-78987375 Msa0706090:intron 45.0%
CAGCATTCTGTGAGCAAACT+AGG + chr4_4:78988104-78988123 None:intergenic 45.0%
AATCGGCAAGCTCCTTCAAA+GGG + chr4_4:78988549-78988568 None:intergenic 45.0%
!! TTGCAGGAGCGTTTGTTTGT+TGG - chr4_4:78988583-78988602 Msa0706090:intron 45.0%
!! GGTATTTATCGGCTCCTTCA+TGG + chr4_4:78988669-78988688 None:intergenic 45.0%
CGAACCAAGCTACCTCATAA+CGG + chr4_4:78988690-78988709 None:intergenic 45.0%
TCTGCACCAAATCTTCTGCA+TGG + chr4_4:78988747-78988766 None:intergenic 45.0%
TACCTATCGAAATGCCCCTT+GGG - chr4_4:78988816-78988835 Msa0706090:intron 45.0%
GATGTTCCTGAGGAGTTAAG+AGG - chr4_4:78988880-78988899 Msa0706090:CDS 45.0%
TCCTGAGGAGTTAAGAGGAA+AGG - chr4_4:78988885-78988904 Msa0706090:CDS 45.0%
ACCTTTCCTCTTAACTCCTC+AGG + chr4_4:78988889-78988908 None:intergenic 45.0%
ATAAGGTGGCCACATGGATA+TGG + chr4_4:78989204-78989223 None:intergenic 45.0%
ACAGGATGTGCATGATAAGG+TGG + chr4_4:78989218-78989237 None:intergenic 45.0%
CACACCTTCGAAGAAGAAAG+GGG - chr4_4:78989290-78989309 Msa0706090:intron 45.0%
TCTTCCCCTTTCTTCTTCGA+AGG + chr4_4:78989297-78989316 None:intergenic 45.0%
AGGGGAAGATGAAACAGTCA+AGG - chr4_4:78989308-78989327 Msa0706090:intron 45.0%
GGGGAAGATGAAACAGTCAA+GGG - chr4_4:78989309-78989328 Msa0706090:intron 45.0%
ACGTAGGGGTTATGGTTGTT+TGG - chr4_4:78989381-78989400 Msa0706090:intron 45.0%
CGTAGGGGTTATGGTTGTTT+GGG - chr4_4:78989382-78989401 Msa0706090:intron 45.0%
GAGATGAGGGTTACAATCTG+AGG + chr4_4:78989606-78989625 None:intergenic 45.0%
GGACGAAGTCTAAAGAGATG+AGG + chr4_4:78989620-78989639 None:intergenic 45.0%
GTGTATGTTTCACAAGTGCG+AGG + chr4_4:78989673-78989692 None:intergenic 45.0%
ATGCATACGTGTGTGTGTGT+GGG + chr4_4:78989750-78989769 None:intergenic 45.0%
AAGAGAAAAGCAGCGATGGT+AGG + chr4_4:78990209-78990228 None:intergenic 45.0%
AATTGTGTGGCATGGAGAAC+TGG - chr4_4:78990236-78990255 Msa0706090:CDS 45.0%
GCTTAGATAGAACAACTGCC+TGG - chr4_4:78990309-78990328 Msa0706090:CDS 45.0%
AAAACAGGGTCATCTGGACT+AGG + chr4_4:78990551-78990570 None:intergenic 45.0%
TCAGTGAAAACAGGGTCATC+TGG + chr4_4:78990557-78990576 None:intergenic 45.0%
GAAGGACGATCAGTGAAAAC+AGG + chr4_4:78990566-78990585 None:intergenic 45.0%
CCTTCATAGTGCCGTAATTG+AGG + chr4_4:78991087-78991106 None:intergenic 45.0%
CCTCAATTACGGCACTATGA+AGG - chr4_4:78991084-78991103 Msa0706090:intron 45.0%
TGAGTTTATTGAACAGCGGC+AGG - chr4_4:78991218-78991237 Msa0706090:intron 45.0%
AGGGAACAAGCACTAGAAGA+AGG - chr4_4:78991258-78991277 Msa0706090:intron 45.0%
!!! AGCTCTGGATCCAGGTTTTT+TGG + chr4_4:78991632-78991651 None:intergenic 45.0%
! CTTCTCTGATGGATCCTTTC+TGG + chr4_4:78991687-78991706 None:intergenic 45.0%
TGTTGAAAGCTGTGACTCCA+AGG - chr4_4:78991913-78991932 Msa0706090:CDS 45.0%
ATACTACAGCAGCAAGGAAG+AGG - chr4_4:78991943-78991962 Msa0706090:intron 45.0%
ATGGGTTCGCTGAATTGCAA+GGG - chr4_4:78992051-78992070 Msa0706090:intron 45.0%
!! AAGGGCACTGCAAAAACAAC+TGG - chr4_4:78992083-78992102 Msa0706090:intron 45.0%
CTATAGTCAACCAGAGGATG+AGG + chr4_4:78992347-78992366 None:intergenic 45.0%
TTATTACCCCCCTTGACTTC+TGG - chr4_4:78992624-78992643 Msa0706090:intron 45.0%
AAATCTCCAGAAGTCAAGGG+GGG + chr4_4:78992633-78992652 None:intergenic 45.0%
!! TATTTGAGGAAAGCACTGGC+AGG + chr4_4:78992789-78992808 None:intergenic 45.0%
ATTAGGAATGGGAATGGCCA+TGG - chr4_4:78993225-78993244 Msa0706090:five_prime_UTR 45.0%
TTAGGAATGGGAATGGCCAT+GGG - chr4_4:78993226-78993245 Msa0706090:five_prime_UTR 45.0%
TGAGTTTGACAACTATGCCC+CGG + chr4_4:78993254-78993273 None:intergenic 45.0%
ACGTGAGAAAGTTCTCTCTC+GGG - chr4_4:78985688-78985707 Msa0706090:three_prime_UTR 45.0%
TTCAACTGTTTCCGTTGTGG+CGG - chr4_4:78985882-78985901 Msa0706090:three_prime_UTR 45.0%
AAAATAGGTTCCCGCCACAA+CGG + chr4_4:78985896-78985915 None:intergenic 45.0%
ACGAAGAAACTACCGACGAA+GGG + chr4_4:78985987-78986006 None:intergenic 45.0%
! CTCCATAACCGACGCATTTT+AGG - chr4_4:78986078-78986097 Msa0706090:three_prime_UTR 45.0%
!! ACCCTAAAATGCGTCGGTTA+TGG + chr4_4:78986083-78986102 None:intergenic 45.0%
GTCTTTATACCCTGCGATGT+TGG - chr4_4:78986132-78986151 Msa0706090:CDS 45.0%
CAGTACAGAACAACACGATC+AGG + chr4_4:78986325-78986344 None:intergenic 45.0%
! AAGGAGAAAGCCTTTGGCTT+TGG - chr4_4:78986718-78986737 Msa0706090:intron 45.0%
! TCATCTGGCTTCAAATCCTC+AGG + chr4_4:78986752-78986771 None:intergenic 45.0%
ACTTCGTCGTAGAAAAGCAG+AGG - chr4_4:78986990-78987009 Msa0706090:CDS 45.0%
GTTTGAATCTATACCGCCAG+AGG - chr4_4:78987057-78987076 Msa0706090:CDS 45.0%
GTTTGGTCATGTAAGGTCAC+TGG - chr4_4:78987080-78987099 Msa0706090:CDS 45.0%
GTCTATACAATCACTCGAGC+AGG + chr4_4:78987288-78987307 None:intergenic 45.0%
!! CCATCCATGTGTTCTGAAAC+AGG + chr4_4:78987359-78987378 None:intergenic 45.0%
CCTGTTTCAGAACACATGGA+TGG - chr4_4:78987356-78987375 Msa0706090:intron 45.0%
CAGCATTCTGTGAGCAAACT+AGG + chr4_4:78988104-78988123 None:intergenic 45.0%
AATCGGCAAGCTCCTTCAAA+GGG + chr4_4:78988549-78988568 None:intergenic 45.0%
!! TTGCAGGAGCGTTTGTTTGT+TGG - chr4_4:78988583-78988602 Msa0706090:intron 45.0%
!! GGTATTTATCGGCTCCTTCA+TGG + chr4_4:78988669-78988688 None:intergenic 45.0%
CGAACCAAGCTACCTCATAA+CGG + chr4_4:78988690-78988709 None:intergenic 45.0%
TCTGCACCAAATCTTCTGCA+TGG + chr4_4:78988747-78988766 None:intergenic 45.0%
TACCTATCGAAATGCCCCTT+GGG - chr4_4:78988816-78988835 Msa0706090:intron 45.0%
GATGTTCCTGAGGAGTTAAG+AGG - chr4_4:78988880-78988899 Msa0706090:CDS 45.0%
TCCTGAGGAGTTAAGAGGAA+AGG - chr4_4:78988885-78988904 Msa0706090:CDS 45.0%
ACCTTTCCTCTTAACTCCTC+AGG + chr4_4:78988889-78988908 None:intergenic 45.0%
ATAAGGTGGCCACATGGATA+TGG + chr4_4:78989204-78989223 None:intergenic 45.0%
ACAGGATGTGCATGATAAGG+TGG + chr4_4:78989218-78989237 None:intergenic 45.0%
CACACCTTCGAAGAAGAAAG+GGG - chr4_4:78989290-78989309 Msa0706090:intron 45.0%
TCTTCCCCTTTCTTCTTCGA+AGG + chr4_4:78989297-78989316 None:intergenic 45.0%
AGGGGAAGATGAAACAGTCA+AGG - chr4_4:78989308-78989327 Msa0706090:intron 45.0%
GGGGAAGATGAAACAGTCAA+GGG - chr4_4:78989309-78989328 Msa0706090:intron 45.0%
ACGTAGGGGTTATGGTTGTT+TGG - chr4_4:78989381-78989400 Msa0706090:intron 45.0%
CGTAGGGGTTATGGTTGTTT+GGG - chr4_4:78989382-78989401 Msa0706090:intron 45.0%
GAGATGAGGGTTACAATCTG+AGG + chr4_4:78989606-78989625 None:intergenic 45.0%
GGACGAAGTCTAAAGAGATG+AGG + chr4_4:78989620-78989639 None:intergenic 45.0%
GTGTATGTTTCACAAGTGCG+AGG + chr4_4:78989673-78989692 None:intergenic 45.0%
ATGCATACGTGTGTGTGTGT+GGG + chr4_4:78989750-78989769 None:intergenic 45.0%
AAGAGAAAAGCAGCGATGGT+AGG + chr4_4:78990209-78990228 None:intergenic 45.0%
AATTGTGTGGCATGGAGAAC+TGG - chr4_4:78990236-78990255 Msa0706090:CDS 45.0%
GCTTAGATAGAACAACTGCC+TGG - chr4_4:78990309-78990328 Msa0706090:CDS 45.0%
AAAACAGGGTCATCTGGACT+AGG + chr4_4:78990551-78990570 None:intergenic 45.0%
TCAGTGAAAACAGGGTCATC+TGG + chr4_4:78990557-78990576 None:intergenic 45.0%
GAAGGACGATCAGTGAAAAC+AGG + chr4_4:78990566-78990585 None:intergenic 45.0%
CCTTCATAGTGCCGTAATTG+AGG + chr4_4:78991087-78991106 None:intergenic 45.0%
CCTCAATTACGGCACTATGA+AGG - chr4_4:78991084-78991103 Msa0706090:intron 45.0%
TGAGTTTATTGAACAGCGGC+AGG - chr4_4:78991218-78991237 Msa0706090:intron 45.0%
AGGGAACAAGCACTAGAAGA+AGG - chr4_4:78991258-78991277 Msa0706090:intron 45.0%
!!! AGCTCTGGATCCAGGTTTTT+TGG + chr4_4:78991632-78991651 None:intergenic 45.0%
! CTTCTCTGATGGATCCTTTC+TGG + chr4_4:78991687-78991706 None:intergenic 45.0%
TGTTGAAAGCTGTGACTCCA+AGG - chr4_4:78991913-78991932 Msa0706090:CDS 45.0%
ATACTACAGCAGCAAGGAAG+AGG - chr4_4:78991943-78991962 Msa0706090:intron 45.0%
ATGGGTTCGCTGAATTGCAA+GGG - chr4_4:78992051-78992070 Msa0706090:intron 45.0%
!! AAGGGCACTGCAAAAACAAC+TGG - chr4_4:78992083-78992102 Msa0706090:intron 45.0%
CTATAGTCAACCAGAGGATG+AGG + chr4_4:78992347-78992366 None:intergenic 45.0%
TTATTACCCCCCTTGACTTC+TGG - chr4_4:78992624-78992643 Msa0706090:intron 45.0%
AAATCTCCAGAAGTCAAGGG+GGG + chr4_4:78992633-78992652 None:intergenic 45.0%
!! TATTTGAGGAAAGCACTGGC+AGG + chr4_4:78992789-78992808 None:intergenic 45.0%
ATTAGGAATGGGAATGGCCA+TGG - chr4_4:78993225-78993244 Msa0706090:five_prime_UTR 45.0%
TTAGGAATGGGAATGGCCAT+GGG - chr4_4:78993226-78993245 Msa0706090:five_prime_UTR 45.0%
TGAGTTTGACAACTATGCCC+CGG + chr4_4:78993254-78993273 None:intergenic 45.0%
GCGTGGTGAAGAAAAACACG+AGG + chr4_4:78985745-78985764 None:intergenic 50.0%
GGTGTGTGTGAGAGAAAGAG+AGG + chr4_4:78985794-78985813 None:intergenic 50.0%
TCAACTGTTTCCGTTGTGGC+GGG - chr4_4:78985883-78985902 Msa0706090:three_prime_UTR 50.0%
GCTGAATCTTTCCCCTTCGT+CGG - chr4_4:78985972-78985991 Msa0706090:three_prime_UTR 50.0%
CGAAGAAACTACCGACGAAG+GGG + chr4_4:78985986-78986005 None:intergenic 50.0%
GACGAAGAAACTACCGACGA+AGG + chr4_4:78985988-78986007 None:intergenic 50.0%
GAAATATGCTTACGCCACCG+TGG + chr4_4:78986029-78986048 None:intergenic 50.0%
! TCTGGCTTCAAATCCTCAGG+AGG + chr4_4:78986749-78986768 None:intergenic 50.0%
ATCTATACCGCCAGAGGGTT+TGG - chr4_4:78987063-78987082 Msa0706090:CDS 50.0%
TACATGACCAAACCCTCTGG+CGG + chr4_4:78987073-78987092 None:intergenic 50.0%
CCTTACATGACCAAACCCTC+TGG + chr4_4:78987076-78987095 None:intergenic 50.0%
! CCAGAGGGTTTGGTCATGTA+AGG - chr4_4:78987073-78987092 Msa0706090:CDS 50.0%
AGACTTGTGTGCTGCACTGA+TGG - chr4_4:78987491-78987510 Msa0706090:intron 50.0%
! TGTGTGCTGCACTGATGGTT+TGG - chr4_4:78987496-78987515 Msa0706090:CDS 50.0%
! GTGTGCTGCACTGATGGTTT+GGG - chr4_4:78987497-78987516 Msa0706090:CDS 50.0%
CATCGGTAGGTTTGTGAAGC+TGG - chr4_4:78987938-78987957 Msa0706090:intron 50.0%
GAGCAAACTAGGACCTTCAG+TGG + chr4_4:78988093-78988112 None:intergenic 50.0%
TGCAGGTATGCTCCCTTTGA+AGG - chr4_4:78988534-78988553 Msa0706090:intron 50.0%
GAATCGGCAAGCTCCTTCAA+AGG + chr4_4:78988550-78988569 None:intergenic 50.0%
! GGAGCGTTTGTTTGTTGGTG+CGG - chr4_4:78988588-78988607 Msa0706090:intron 50.0%
CTACCTATCGAAATGCCCCT+TGG - chr4_4:78988815-78988834 Msa0706090:intron 50.0%
!! AACCCAAGGGGCATTTCGAT+AGG + chr4_4:78988821-78988840 None:intergenic 50.0%
TATCTCCACCGATGTTCCTG+AGG - chr4_4:78988870-78988889 Msa0706090:CDS 50.0%
TAACTCCTCAGGAACATCGG+TGG + chr4_4:78988878-78988897 None:intergenic 50.0%
! GATTCACAATCTAGGGTGCG+AGG + chr4_4:78989085-78989104 None:intergenic 50.0%
TGCATGATAAGGTGGCCACA+TGG + chr4_4:78989210-78989229 None:intergenic 50.0%
CAGTCAAGGGTTGCTGCTAT+TGG - chr4_4:78989322-78989341 Msa0706090:intron 50.0%
TTAGGGTGACGTAGGGGTTA+TGG - chr4_4:78989373-78989392 Msa0706090:intron 50.0%
ATGACCCTCTCTCACGTAAC+CGG + chr4_4:78989408-78989427 None:intergenic 50.0%
GGTTACAATCTGAGGAGCGA+AGG + chr4_4:78989598-78989617 None:intergenic 50.0%
TTTCACAAGTGCGAGGGAGA+AGG + chr4_4:78989666-78989685 None:intergenic 50.0%
ATACGTGTGTGTGTGTGGGT+GGG + chr4_4:78989746-78989765 None:intergenic 50.0%
CATGCATACGTGTGTGTGTG+TGG + chr4_4:78989751-78989770 None:intergenic 50.0%
AAGGGTGGCAAGATCAAACC+AGG + chr4_4:78989798-78989817 None:intergenic 50.0%
TGCTTAAGATCGAGAGGGGA+GGG + chr4_4:78989880-78989899 None:intergenic 50.0%
TTGCTTAAGATCGAGAGGGG+AGG + chr4_4:78989881-78989900 None:intergenic 50.0%
TTGGACGGGACACTAGTCAA+TGG - chr4_4:78990070-78990089 Msa0706090:CDS 50.0%
ACACTTGTCGCCGTACTCTT+TGG - chr4_4:78990673-78990692 Msa0706090:intron 50.0%
CTGCCATAAGGATGGGAATG+CGG - chr4_4:78990715-78990734 Msa0706090:intron 50.0%
GAACCGCATTCCCATCCTTA+TGG + chr4_4:78990721-78990740 None:intergenic 50.0%
GTGCAGCATGAGATTCGACA+AGG + chr4_4:78990745-78990764 None:intergenic 50.0%
ATTGAACAGCGGCAGGAACT+TGG - chr4_4:78991225-78991244 Msa0706090:intron 50.0%
TTGAACAGCGGCAGGAACTT+GGG - chr4_4:78991226-78991245 Msa0706090:intron 50.0%
AGGAACTTGGGGCCTCTAAA+AGG - chr4_4:78991238-78991257 Msa0706090:intron 50.0%
! GGAACTTGGGGCCTCTAAAA+GGG - chr4_4:78991239-78991258 Msa0706090:intron 50.0%
!! GTTCTTTCAGCTCTGGATCC+AGG + chr4_4:78991640-78991659 None:intergenic 50.0%
!! TCTGCTGGTTCTTTCAGCTC+TGG + chr4_4:78991647-78991666 None:intergenic 50.0%
CAAATATCCTCCCATCGCGA+CGG + chr4_4:78991895-78991914 None:intergenic 50.0%
AAAGCTGTGACTCCAAGGAG+TGG - chr4_4:78991918-78991937 Msa0706090:CDS 50.0%
AAGCTGTGACTCCAAGGAGT+GGG - chr4_4:78991919-78991938 Msa0706090:CDS 50.0%
! GATGGGTTCGCTGAATTGCA+AGG - chr4_4:78992050-78992069 Msa0706090:intron 50.0%
ATGACGAGTCTGTGCTTCGA+AGG - chr4_4:78992730-78992749 Msa0706090:intron 50.0%
TTGTAGCTTCCCCAGTCGAA+GGG + chr4_4:78993143-78993162 None:intergenic 50.0%
ATTGTAGCTTCCCCAGTCGA+AGG + chr4_4:78993144-78993163 None:intergenic 50.0%
GCGTGGTGAAGAAAAACACG+AGG + chr4_4:78985745-78985764 None:intergenic 50.0%
GGTGTGTGTGAGAGAAAGAG+AGG + chr4_4:78985794-78985813 None:intergenic 50.0%
TCAACTGTTTCCGTTGTGGC+GGG - chr4_4:78985883-78985902 Msa0706090:three_prime_UTR 50.0%
GCTGAATCTTTCCCCTTCGT+CGG - chr4_4:78985972-78985991 Msa0706090:three_prime_UTR 50.0%
CGAAGAAACTACCGACGAAG+GGG + chr4_4:78985986-78986005 None:intergenic 50.0%
GACGAAGAAACTACCGACGA+AGG + chr4_4:78985988-78986007 None:intergenic 50.0%
GAAATATGCTTACGCCACCG+TGG + chr4_4:78986029-78986048 None:intergenic 50.0%
! TCTGGCTTCAAATCCTCAGG+AGG + chr4_4:78986749-78986768 None:intergenic 50.0%
ATCTATACCGCCAGAGGGTT+TGG - chr4_4:78987063-78987082 Msa0706090:CDS 50.0%
TACATGACCAAACCCTCTGG+CGG + chr4_4:78987073-78987092 None:intergenic 50.0%
CCTTACATGACCAAACCCTC+TGG + chr4_4:78987076-78987095 None:intergenic 50.0%
! CCAGAGGGTTTGGTCATGTA+AGG - chr4_4:78987073-78987092 Msa0706090:CDS 50.0%
AGACTTGTGTGCTGCACTGA+TGG - chr4_4:78987491-78987510 Msa0706090:intron 50.0%
! TGTGTGCTGCACTGATGGTT+TGG - chr4_4:78987496-78987515 Msa0706090:CDS 50.0%
! GTGTGCTGCACTGATGGTTT+GGG - chr4_4:78987497-78987516 Msa0706090:CDS 50.0%
CATCGGTAGGTTTGTGAAGC+TGG - chr4_4:78987938-78987957 Msa0706090:intron 50.0%
GAGCAAACTAGGACCTTCAG+TGG + chr4_4:78988093-78988112 None:intergenic 50.0%
TGCAGGTATGCTCCCTTTGA+AGG - chr4_4:78988534-78988553 Msa0706090:intron 50.0%
GAATCGGCAAGCTCCTTCAA+AGG + chr4_4:78988550-78988569 None:intergenic 50.0%
! GGAGCGTTTGTTTGTTGGTG+CGG - chr4_4:78988588-78988607 Msa0706090:intron 50.0%
CTACCTATCGAAATGCCCCT+TGG - chr4_4:78988815-78988834 Msa0706090:intron 50.0%
!! AACCCAAGGGGCATTTCGAT+AGG + chr4_4:78988821-78988840 None:intergenic 50.0%
TATCTCCACCGATGTTCCTG+AGG - chr4_4:78988870-78988889 Msa0706090:CDS 50.0%
TAACTCCTCAGGAACATCGG+TGG + chr4_4:78988878-78988897 None:intergenic 50.0%
! GATTCACAATCTAGGGTGCG+AGG + chr4_4:78989085-78989104 None:intergenic 50.0%
TGCATGATAAGGTGGCCACA+TGG + chr4_4:78989210-78989229 None:intergenic 50.0%
CAGTCAAGGGTTGCTGCTAT+TGG - chr4_4:78989322-78989341 Msa0706090:intron 50.0%
TTAGGGTGACGTAGGGGTTA+TGG - chr4_4:78989373-78989392 Msa0706090:intron 50.0%
ATGACCCTCTCTCACGTAAC+CGG + chr4_4:78989408-78989427 None:intergenic 50.0%
GGTTACAATCTGAGGAGCGA+AGG + chr4_4:78989598-78989617 None:intergenic 50.0%
TTTCACAAGTGCGAGGGAGA+AGG + chr4_4:78989666-78989685 None:intergenic 50.0%
ATACGTGTGTGTGTGTGGGT+GGG + chr4_4:78989746-78989765 None:intergenic 50.0%
CATGCATACGTGTGTGTGTG+TGG + chr4_4:78989751-78989770 None:intergenic 50.0%
AAGGGTGGCAAGATCAAACC+AGG + chr4_4:78989798-78989817 None:intergenic 50.0%
TGCTTAAGATCGAGAGGGGA+GGG + chr4_4:78989880-78989899 None:intergenic 50.0%
TTGCTTAAGATCGAGAGGGG+AGG + chr4_4:78989881-78989900 None:intergenic 50.0%
TTGGACGGGACACTAGTCAA+TGG - chr4_4:78990070-78990089 Msa0706090:CDS 50.0%
ACACTTGTCGCCGTACTCTT+TGG - chr4_4:78990673-78990692 Msa0706090:intron 50.0%
CTGCCATAAGGATGGGAATG+CGG - chr4_4:78990715-78990734 Msa0706090:intron 50.0%
GAACCGCATTCCCATCCTTA+TGG + chr4_4:78990721-78990740 None:intergenic 50.0%
GTGCAGCATGAGATTCGACA+AGG + chr4_4:78990745-78990764 None:intergenic 50.0%
ATTGAACAGCGGCAGGAACT+TGG - chr4_4:78991225-78991244 Msa0706090:intron 50.0%
TTGAACAGCGGCAGGAACTT+GGG - chr4_4:78991226-78991245 Msa0706090:intron 50.0%
AGGAACTTGGGGCCTCTAAA+AGG - chr4_4:78991238-78991257 Msa0706090:intron 50.0%
! GGAACTTGGGGCCTCTAAAA+GGG - chr4_4:78991239-78991258 Msa0706090:intron 50.0%
!! GTTCTTTCAGCTCTGGATCC+AGG + chr4_4:78991640-78991659 None:intergenic 50.0%
!! TCTGCTGGTTCTTTCAGCTC+TGG + chr4_4:78991647-78991666 None:intergenic 50.0%
CAAATATCCTCCCATCGCGA+CGG + chr4_4:78991895-78991914 None:intergenic 50.0%
AAAGCTGTGACTCCAAGGAG+TGG - chr4_4:78991918-78991937 Msa0706090:CDS 50.0%
AAGCTGTGACTCCAAGGAGT+GGG - chr4_4:78991919-78991938 Msa0706090:CDS 50.0%
! GATGGGTTCGCTGAATTGCA+AGG - chr4_4:78992050-78992069 Msa0706090:intron 50.0%
ATGACGAGTCTGTGCTTCGA+AGG - chr4_4:78992730-78992749 Msa0706090:intron 50.0%
TTGTAGCTTCCCCAGTCGAA+GGG + chr4_4:78993143-78993162 None:intergenic 50.0%
ATTGTAGCTTCCCCAGTCGA+AGG + chr4_4:78993144-78993163 None:intergenic 50.0%
TCGTGGGTTTCCCATAGCGA+AGG - chr4_4:78985650-78985669 Msa0706090:three_prime_UTR 55.0%
TGGGTTTCCCATAGCGAAGG+AGG - chr4_4:78985653-78985672 Msa0706090:three_prime_UTR 55.0%
GGGTTTCCCATAGCGAAGGA+GGG - chr4_4:78985654-78985673 Msa0706090:three_prime_UTR 55.0%
GGTTTCCCATAGCGAAGGAG+GGG - chr4_4:78985655-78985674 Msa0706090:three_prime_UTR 55.0%
GGTGCATGTCTCTGTCTGAC+AGG - chr4_4:78986666-78986685 Msa0706090:intron 55.0%
GGGGTTATGGTTGTTTGGGC+CGG - chr4_4:78989386-78989405 Msa0706090:intron 55.0%
TTTGGGCCGAGTTCTCTCCA+TGG - chr4_4:78989481-78989500 Msa0706090:intron 55.0%
AGGACGGAAGGACAGTCTGA+GGG + chr4_4:78989641-78989660 None:intergenic 55.0%
CATACGTGTGTGTGTGTGGG+TGG + chr4_4:78989747-78989766 None:intergenic 55.0%
TTACGCACGATCAGGAAGGG+TGG + chr4_4:78989813-78989832 None:intergenic 55.0%
GGGGTAGCAAGATTGCAACC+AGG + chr4_4:78989859-78989878 None:intergenic 55.0%
CTTAAGATCGAGAGGGGAGG+GGG + chr4_4:78989878-78989897 None:intergenic 55.0%
GCTTAAGATCGAGAGGGGAG+GGG + chr4_4:78989879-78989898 None:intergenic 55.0%
TGAACAGCGGCAGGAACTTG+GGG - chr4_4:78991227-78991246 Msa0706090:intron 55.0%
! TATTGGTGGTTCCGTCGCGA+TGG - chr4_4:78991881-78991900 Msa0706090:CDS 55.0%
! ATTGGTGGTTCCGTCGCGAT+GGG - chr4_4:78991882-78991901 Msa0706090:CDS 55.0%
AGCTGTGACTCCAAGGAGTG+GGG - chr4_4:78991920-78991939 Msa0706090:CDS 55.0%
GCTGTAGTATCCCCACTCCT+TGG + chr4_4:78991933-78991952 None:intergenic 55.0%
GTGGGGATACTACAGCAGCA+AGG - chr4_4:78991937-78991956 Msa0706090:intron 55.0%
CGCTGAATTGCAAGGGTGAG+CGG - chr4_4:78992058-78992077 Msa0706090:intron 55.0%
GCTGAATTGCAAGGGTGAGC+GGG - chr4_4:78992059-78992078 Msa0706090:intron 55.0%
ATTGCAAGGGTGAGCGGGAA+AGG - chr4_4:78992064-78992083 Msa0706090:intron 55.0%
TTGCAAGGGTGAGCGGGAAA+GGG - chr4_4:78992065-78992084 Msa0706090:intron 55.0%
TCGTGTTCGAGCTCCACCTA+GGG - chr4_4:78992758-78992777 Msa0706090:intron 55.0%
! CTGGCAGGATTTTCCCTAGG+TGG + chr4_4:78992774-78992793 None:intergenic 55.0%
!! GCACTGGCAGGATTTTCCCT+AGG + chr4_4:78992777-78992796 None:intergenic 55.0%
! TGTAGTGGAGACCCTTCGAC+TGG - chr4_4:78993129-78993148 Msa0706090:intron 55.0%
! GTAGTGGAGACCCTTCGACT+GGG - chr4_4:78993130-78993149 Msa0706090:intron 55.0%
TAGTGGAGACCCTTCGACTG+GGG - chr4_4:78993131-78993150 Msa0706090:intron 55.0%
TACATTCAGGCCATGGGAGC+CGG - chr4_4:78993293-78993312 Msa0706090:five_prime_UTR 55.0%
TCGTGGGTTTCCCATAGCGA+AGG - chr4_4:78985650-78985669 Msa0706090:three_prime_UTR 55.0%
TGGGTTTCCCATAGCGAAGG+AGG - chr4_4:78985653-78985672 Msa0706090:three_prime_UTR 55.0%
GGGTTTCCCATAGCGAAGGA+GGG - chr4_4:78985654-78985673 Msa0706090:three_prime_UTR 55.0%
GGTTTCCCATAGCGAAGGAG+GGG - chr4_4:78985655-78985674 Msa0706090:three_prime_UTR 55.0%
GGTGCATGTCTCTGTCTGAC+AGG - chr4_4:78986666-78986685 Msa0706090:intron 55.0%
GGGGTTATGGTTGTTTGGGC+CGG - chr4_4:78989386-78989405 Msa0706090:intron 55.0%
TTTGGGCCGAGTTCTCTCCA+TGG - chr4_4:78989481-78989500 Msa0706090:intron 55.0%
AGGACGGAAGGACAGTCTGA+GGG + chr4_4:78989641-78989660 None:intergenic 55.0%
CATACGTGTGTGTGTGTGGG+TGG + chr4_4:78989747-78989766 None:intergenic 55.0%
TTACGCACGATCAGGAAGGG+TGG + chr4_4:78989813-78989832 None:intergenic 55.0%
GGGGTAGCAAGATTGCAACC+AGG + chr4_4:78989859-78989878 None:intergenic 55.0%
CTTAAGATCGAGAGGGGAGG+GGG + chr4_4:78989878-78989897 None:intergenic 55.0%
GCTTAAGATCGAGAGGGGAG+GGG + chr4_4:78989879-78989898 None:intergenic 55.0%
TGAACAGCGGCAGGAACTTG+GGG - chr4_4:78991227-78991246 Msa0706090:intron 55.0%
! TATTGGTGGTTCCGTCGCGA+TGG - chr4_4:78991881-78991900 Msa0706090:CDS 55.0%
! ATTGGTGGTTCCGTCGCGAT+GGG - chr4_4:78991882-78991901 Msa0706090:CDS 55.0%
AGCTGTGACTCCAAGGAGTG+GGG - chr4_4:78991920-78991939 Msa0706090:CDS 55.0%
GCTGTAGTATCCCCACTCCT+TGG + chr4_4:78991933-78991952 None:intergenic 55.0%
GTGGGGATACTACAGCAGCA+AGG - chr4_4:78991937-78991956 Msa0706090:intron 55.0%
CGCTGAATTGCAAGGGTGAG+CGG - chr4_4:78992058-78992077 Msa0706090:intron 55.0%
GCTGAATTGCAAGGGTGAGC+GGG - chr4_4:78992059-78992078 Msa0706090:intron 55.0%
ATTGCAAGGGTGAGCGGGAA+AGG - chr4_4:78992064-78992083 Msa0706090:intron 55.0%
TTGCAAGGGTGAGCGGGAAA+GGG - chr4_4:78992065-78992084 Msa0706090:intron 55.0%
TCGTGTTCGAGCTCCACCTA+GGG - chr4_4:78992758-78992777 Msa0706090:intron 55.0%
! CTGGCAGGATTTTCCCTAGG+TGG + chr4_4:78992774-78992793 None:intergenic 55.0%
!! GCACTGGCAGGATTTTCCCT+AGG + chr4_4:78992777-78992796 None:intergenic 55.0%
! TGTAGTGGAGACCCTTCGAC+TGG - chr4_4:78993129-78993148 Msa0706090:intron 55.0%
! GTAGTGGAGACCCTTCGACT+GGG - chr4_4:78993130-78993149 Msa0706090:intron 55.0%
TAGTGGAGACCCTTCGACTG+GGG - chr4_4:78993131-78993150 Msa0706090:intron 55.0%
TACATTCAGGCCATGGGAGC+CGG - chr4_4:78993293-78993312 Msa0706090:five_prime_UTR 55.0%
! AGAAGGTGCGTGTGCGTCGT+GGG - chr4_4:78985634-78985653 Msa0706090:three_prime_UTR 60.0%
TTCCCATAGCGAAGGAGGGG+AGG - chr4_4:78985658-78985677 Msa0706090:three_prime_UTR 60.0%
TCCCATAGCGAAGGAGGGGA+GGG - chr4_4:78985659-78985678 Msa0706090:three_prime_UTR 60.0%
TCCCTCCCCTCCTTCGCTAT+GGG + chr4_4:78985663-78985682 None:intergenic 60.0%
! CTGCCGCAGCAGCTTTTCCA+CGG - chr4_4:78986009-78986028 Msa0706090:three_prime_UTR 60.0%
CCACCGTGGAAAAGCTGCTG+CGG + chr4_4:78986015-78986034 None:intergenic 60.0%
GGAGGCTCAGCCAAAGCCAA+AGG + chr4_4:78986731-78986750 None:intergenic 60.0%
TTGGGCCGGTTACGTGAGAG+AGG - chr4_4:78989400-78989419 Msa0706090:intron 60.0%
TGGGCCGGTTACGTGAGAGA+GGG - chr4_4:78989401-78989420 Msa0706090:intron 60.0%
GGGCCTCCATGGAGAGAACT+CGG + chr4_4:78989490-78989509 None:intergenic 60.0%
AGCGAAGGCAAGAGAGGCGA+GGG + chr4_4:78989583-78989602 None:intergenic 60.0%
CTGAGGAGCGAAGGCAAGAG+AGG + chr4_4:78989589-78989608 None:intergenic 60.0%
CAGGACGGAAGGACAGTCTG+AGG + chr4_4:78989642-78989661 None:intergenic 60.0%
AGGGAGAAGGACAGGACGGA+AGG + chr4_4:78989653-78989672 None:intergenic 60.0%
TGCGAGGGAGAAGGACAGGA+CGG + chr4_4:78989657-78989676 None:intergenic 60.0%
CAAGTGCGAGGGAGAAGGAC+AGG + chr4_4:78989661-78989680 None:intergenic 60.0%
GTGTGTGTGTGTGGGTGGGT+GGG + chr4_4:78989742-78989761 None:intergenic 60.0%
CTCGTGTTCGAGCTCCACCT+AGG - chr4_4:78992757-78992776 Msa0706090:intron 60.0%
ATGGGAATGGCCATGGGAGC+CGG - chr4_4:78993232-78993251 Msa0706090:five_prime_UTR 60.0%
! AGAAGGTGCGTGTGCGTCGT+GGG - chr4_4:78985634-78985653 Msa0706090:three_prime_UTR 60.0%
TTCCCATAGCGAAGGAGGGG+AGG - chr4_4:78985658-78985677 Msa0706090:three_prime_UTR 60.0%
TCCCATAGCGAAGGAGGGGA+GGG - chr4_4:78985659-78985678 Msa0706090:three_prime_UTR 60.0%
TCCCTCCCCTCCTTCGCTAT+GGG + chr4_4:78985663-78985682 None:intergenic 60.0%
! CTGCCGCAGCAGCTTTTCCA+CGG - chr4_4:78986009-78986028 Msa0706090:three_prime_UTR 60.0%
CCACCGTGGAAAAGCTGCTG+CGG + chr4_4:78986015-78986034 None:intergenic 60.0%
GGAGGCTCAGCCAAAGCCAA+AGG + chr4_4:78986731-78986750 None:intergenic 60.0%
TTGGGCCGGTTACGTGAGAG+AGG - chr4_4:78989400-78989419 Msa0706090:intron 60.0%
TGGGCCGGTTACGTGAGAGA+GGG - chr4_4:78989401-78989420 Msa0706090:intron 60.0%
GGGCCTCCATGGAGAGAACT+CGG + chr4_4:78989490-78989509 None:intergenic 60.0%
AGCGAAGGCAAGAGAGGCGA+GGG + chr4_4:78989583-78989602 None:intergenic 60.0%
CTGAGGAGCGAAGGCAAGAG+AGG + chr4_4:78989589-78989608 None:intergenic 60.0%
CAGGACGGAAGGACAGTCTG+AGG + chr4_4:78989642-78989661 None:intergenic 60.0%
AGGGAGAAGGACAGGACGGA+AGG + chr4_4:78989653-78989672 None:intergenic 60.0%
TGCGAGGGAGAAGGACAGGA+CGG + chr4_4:78989657-78989676 None:intergenic 60.0%
CAAGTGCGAGGGAGAAGGAC+AGG + chr4_4:78989661-78989680 None:intergenic 60.0%
GTGTGTGTGTGTGGGTGGGT+GGG + chr4_4:78989742-78989761 None:intergenic 60.0%
CTCGTGTTCGAGCTCCACCT+AGG - chr4_4:78992757-78992776 Msa0706090:intron 60.0%
ATGGGAATGGCCATGGGAGC+CGG - chr4_4:78993232-78993251 Msa0706090:five_prime_UTR 60.0%
CTCCCTCCCCTCCTTCGCTA+TGG + chr4_4:78985664-78985683 None:intergenic 65.0%
CGCTGCGCAGAGCGTGTTAG+CGG + chr4_4:78985815-78985834 None:intergenic 65.0%
! CCGCAGCAGCTTTTCCACGG+TGG - chr4_4:78986012-78986031 Msa0706090:three_prime_UTR 65.0%
! GGCTTTGGCTGAGCCTCCTG+AGG - chr4_4:78986733-78986752 Msa0706090:intron 65.0%
GGGCCGAGTTCTCTCCATGG+AGG - chr4_4:78989484-78989503 Msa0706090:intron 65.0%
GAGCGAAGGCAAGAGAGGCG+AGG + chr4_4:78989584-78989603 None:intergenic 65.0%
CGTGTGTGTGTGTGGGTGGG+TGG + chr4_4:78989743-78989762 None:intergenic 65.0%
TGGGAATGGCCATGGGAGCC+GGG - chr4_4:78993233-78993252 Msa0706090:five_prime_UTR 65.0%
CAACTATGCCCCGGCTCCCA+TGG + chr4_4:78993245-78993264 None:intergenic 65.0%
CTCCCTCCCCTCCTTCGCTA+TGG + chr4_4:78985664-78985683 None:intergenic 65.0%
CGCTGCGCAGAGCGTGTTAG+CGG + chr4_4:78985815-78985834 None:intergenic 65.0%
! CCGCAGCAGCTTTTCCACGG+TGG - chr4_4:78986012-78986031 Msa0706090:three_prime_UTR 65.0%
! GGCTTTGGCTGAGCCTCCTG+AGG - chr4_4:78986733-78986752 Msa0706090:intron 65.0%
GGGCCGAGTTCTCTCCATGG+AGG - chr4_4:78989484-78989503 Msa0706090:intron 65.0%
GAGCGAAGGCAAGAGAGGCG+AGG + chr4_4:78989584-78989603 None:intergenic 65.0%
CGTGTGTGTGTGTGGGTGGG+TGG + chr4_4:78989743-78989762 None:intergenic 65.0%
TGGGAATGGCCATGGGAGCC+GGG - chr4_4:78993233-78993252 Msa0706090:five_prime_UTR 65.0%
CAACTATGCCCCGGCTCCCA+TGG + chr4_4:78993245-78993264 None:intergenic 65.0%
GGTGGTTCCGTCGCGATGGG+AGG - chr4_4:78991885-78991904 Msa0706090:CDS 70.0%
GGGAATGGCCATGGGAGCCG+GGG - chr4_4:78993234-78993253 Msa0706090:five_prime_UTR 70.0%
GGTGGTTCCGTCGCGATGGG+AGG - chr4_4:78991885-78991904 Msa0706090:CDS 70.0%
GGGAATGGCCATGGGAGCCG+GGG - chr4_4:78993234-78993253 Msa0706090:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 78985634 78993316 78985634 ID=Msa0706090;Name=Msa0706090
chr4_4 mRNA 78985634 78993316 78985634 ID=Msa0706090-mRNA-1;Parent=Msa0706090;Name=Msa0706090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=184|0.9|0.90|1|0.8|0.72|11|483|708
chr4_4 exon 78985634 78986267 78985634 ID=Msa0706090-mRNA-1:exon:25367;Parent=Msa0706090-mRNA-1
chr4_4 exon 78986823 78986911 78986823 ID=Msa0706090-mRNA-1:exon:25366;Parent=Msa0706090-mRNA-1
chr4_4 exon 78986986 78987147 78986986 ID=Msa0706090-mRNA-1:exon:25365;Parent=Msa0706090-mRNA-1
chr4_4 exon 78987226 78987358 78987226 ID=Msa0706090-mRNA-1:exon:25364;Parent=Msa0706090-mRNA-1
chr4_4 exon 78987493 78987923 78987493 ID=Msa0706090-mRNA-1:exon:25363;Parent=Msa0706090-mRNA-1
chr4_4 exon 78988118 78988461 78988118 ID=Msa0706090-mRNA-1:exon:25362;Parent=Msa0706090-mRNA-1
chr4_4 exon 78988841 78988919 78988841 ID=Msa0706090-mRNA-1:exon:25361;Parent=Msa0706090-mRNA-1
chr4_4 exon 78989993 78990411 78989993 ID=Msa0706090-mRNA-1:exon:25360;Parent=Msa0706090-mRNA-1
chr4_4 exon 78991735 78991940 78991735 ID=Msa0706090-mRNA-1:exon:25359;Parent=Msa0706090-mRNA-1
chr4_4 exon 78992131 78992277 78992131 ID=Msa0706090-mRNA-1:exon:25358;Parent=Msa0706090-mRNA-1
chr4_4 exon 78993167 78993316 78993167 ID=Msa0706090-mRNA-1:exon:25357;Parent=Msa0706090-mRNA-1
chr4_4 five_prime_UTR 78993167 78993316 78993167 ID=Msa0706090-mRNA-1:five_prime_utr;Parent=Msa0706090-mRNA-1
chr4_4 five_prime_UTR 78992244 78992277 78992244 ID=Msa0706090-mRNA-1:five_prime_utr;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78992131 78992243 78992131 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78991735 78991940 78991735 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78989993 78990411 78989993 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78988841 78988919 78988841 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78988118 78988461 78988118 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78987493 78987923 78987493 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78987226 78987358 78987226 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78986986 78987147 78986986 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78986823 78986911 78986823 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 CDS 78986117 78986267 78986117 ID=Msa0706090-mRNA-1:cds;Parent=Msa0706090-mRNA-1
chr4_4 three_prime_UTR 78985634 78986116 78985634 ID=Msa0706090-mRNA-1:three_prime_utr;Parent=Msa0706090-mRNA-1
Gene Sequence

>Msa0706090

ATGCCTCTTTTAAGGAGAAAGCCTTTGGCTTTGGCTGAGCCTCCTGAGGATTTGAAGCCAGATGAGCATGTTTACCAAGTTCGATTTACAAAAGAAATTTTTCGAGATTATCAAGGATATGGATGGTCAACCTTAACACAAATTAGCGATTATTTGCAACGTTTGAATCTATACCGCCAGAGGGTTTGGTCATGTAAGGTCACTGGAAAAACTGGCTTGACTTATGAAGAGGCTATTGTGTCAGAACAACGAGCGACTGAGAAGTTCCTACAGTTTCCAAAAGAATTCATGACTCCTGCTTTAAAGATCATTCAGTACAGTATGCTCCCTTTGAAGGAGCTTGCCGATTCTCTTGCTGAAAAATTGCAGGAGCGTTTGTTTGTTGGTGCGGAATTGTATGGGAAAAAAGATGATGATGTATGTCCATGCAAAATATTAAAAGTCATCCATGAAGGAGCCGATAAATACCGTTATGAGGTAGCTTGGTTCGACAAAAACAAGAATATAAGTGAAAAAACAGAAGTCCATGCAGAAGATTTGGTGCAGAAGAAGCCCCTTTTTAGTAGAAATACTCTAAAGGCTTTCATCCGGGAATCTACCTATCGAAATGCCCCTTGGGTTTTACATGACAAACTGGCACAAAATCATGGTATCTCCACCGATGTTCCTGAGGAGTTAAGAGGAAAGGTTTTTCTCAAAGACGGACTTATAATTTGCTCCAAGAAAAGGAATAATGAGGAATCAATGGAAGAAGCCGATAAACATAAAAGAAAGAAGTTGGACGGGACACTAGTCAATGGTTCTGCACAAGAGAAAGAACATGAAGAACACAAGGAAATACCAGTCAAATATCCCATTGATGATCTATTGGTGAAGCCTAGTCCAGATGACCCTGTTTTCACTGATCGTCCTTCTCCATCAAGAGACTTTAATGTTCCAATGCATTGTGTAGGGAATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAAACAGTTACACTTGTCGCCGTACTCTTTGGAAGATTTTGAAAATGCAATCTGCCATAAGGATGGGAATGCGGTTCTCCTTGTCGAATCTCATGCTGCACTTTTTCGAGTTCTTATCAAAGATGACGGTGAATACACTTCAGCTGTACAGAAACGAAGTGTGAAGAAGATAACAATGGTTAACTGGAGAGAATATTTATGCGATTTTCTAGAAATGATCAATATTCCTCAATTACGGCACTATGAAGGAACCATAAAACGGGGACATTATTGCCTTGTAGATGCCAATGCTAAACTAGAAATCTTATGTGAGTTGGTCAATCGAGCCCTTGAAACTGCAATTTTCAGGGAAAAGTTGGATGAGTTTATTGAACAGCGGCAGGAACTTGGGGCCTCTAAAAGGGAACAAGCACTAGAAGAAGGTAGAAAGAGAAGAGAACAAAAAGAGAGGTTGAAAGCTGACTCAGAAAGCAATGGGAATCATCTCAACGGTGCTGATATTCTTTCAAACAATAATCACATTAAACAAAATGGACATGTGGGGAAGAAAATAAATGGAGAGATAGAATCATCTAGGCAAGACAATTCACTGGGTAAAAGTGAGGTTAAGCGTTCAAGCCCTGCTTCAAAACAGACTCCAAAAAACCTGGATCCAGAGCTGAAAGAACCAGCAGAAAATGGAAAAGAATTATCCAGAAAGGATCCATCAGAGAAGAATAGTATAGAGCAGAGGAGAGAATACTTTGAACGAGAGATGGAGAAACGACCTATTAGTAGAAGCCCATTAGGTAAAGACCGAGACTACAATAGGTATTGGTGGTTCCGTCGCGATGGGAGGATATTTGTTGAAAGCTGTGACTCCAAGGAGTGGGGATACTACAGCAGCAAGGAAGAGCTTGATGCATTGATGGGTTCGCTGAATTGCAAGGGTGAGCGGGAAAGGGCACTGCAAAAACAACTGGAAAACAATTATCGTAGTATATGCACAGAACTGCAGAAAAGATCAAAGGAATTGATGCAGAATATTGCGAATGACGAGTCTGTGCTTCGAAGGTCTACTCGTGTTCGAGCTCCACCTAGGGAAAATCCTGCCAGTGCTTTCCTCAAATATGTTAACAAGTGGAAAGAAGATTAA
Protein sequence

>Msa0706090

MPLLRRKPLALAEPPEDLKPDEHVYQVRFTKEIFRDYQGYGWSTLTQISDYLQRLNLYRQRVWSCKVTGKTGLTYEEAIVSEQRATEKFLQFPKEFMTPALKIIQYSMLPLKELADSLAEKLQERLFVGAELYGKKDDDVCPCKILKVIHEGADKYRYEVAWFDKNKNISEKTEVHAEDLVQKKPLFSRNTLKAFIRESTYRNAPWVLHDKLAQNHGISTDVPEELRGKVFLKDGLIICSKKRNNEESMEEADKHKRKKLDGTLVNGSAQEKEHEEHKEIPVKYPIDDLLVKPSPDDPVFTDRPSPSRDFNVPMHCVGNLLMVWDFCTSFGKQLHLSPYSLEDFENAICHKDGNAVLLVESHAALFRVLIKDDGEYTSAVQKRSVKKITMVNWREYLCDFLEMINIPQLRHYEGTIKRGHYCLVDANAKLEILCELVNRALETAIFREKLDEFIEQRQELGASKREQALEEGRKRREQKERLKADSESNGNHLNGADILSNNNHIKQNGHVGKKINGEIESSRQDNSLGKSEVKRSSPASKQTPKNLDPELKEPAENGKELSRKDPSEKNSIEQRREYFEREMEKRPISRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGYYSSKEELDALMGSLNCKGERERALQKQLENNYRSICTELQKRSKELMQNIANDESVLRRSTRVRAPPRENPASAFLKYVNKWKED*