Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298620 | sp|Q9FL12|DEGP9_ARATH | 83.721 | 387 | 63 | 0 | 10 | 396 | 202 | 588 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298620 | G7JNU4 | 99.483 | 387 | 2 | 0 | 10 | 396 | 204 | 590 | 0.0 | 791 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046830 | Msa1298620 | 0.803087 | 4.121537e-49 | -8.615850e-47 |
| Msa0706090 | Msa1298620 | 0.802929 | 4.443600e-49 | -8.615850e-47 |
| Msa0790400 | Msa1298620 | 0.838197 | 3.318718e-57 | -8.615850e-47 |
| Msa0188690 | Msa1298620 | 0.842442 | 2.580198e-58 | -8.615850e-47 |
| Msa1298620 | Msa1356610 | 0.802750 | 4.838056e-49 | -8.615850e-47 |
| Msa1298620 | Msa1403570 | 0.849936 | 2.347683e-60 | -8.615850e-47 |
| Msa1298620 | Msa1411500 | 0.801789 | 7.629374e-49 | -8.615850e-47 |
| Msa1298620 | Msa1443300 | 0.838086 | 3.542749e-57 | -8.615850e-47 |
| Msa0270210 | Msa1298620 | 0.860575 | 1.877808e-63 | -8.615850e-47 |
| Msa0307850 | Msa1298620 | 0.825556 | 4.395255e-54 | -8.615850e-47 |
| Msa1120790 | Msa1298620 | 0.842006 | 3.364105e-58 | -8.615850e-47 |
| Msa1123350 | Msa1298620 | 0.810621 | 1.052497e-50 | -8.615850e-47 |
| Msa1171960 | Msa1298620 | 0.843211 | 1.610523e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298620 | MtrunA17_Chr4g0059321 | 99.483 | 387 | 2 | 0 | 10 | 396 | 204 | 590 | 0.0 | 791 |
| Msa1298620 | MtrunA17_Chr1g0196111 | 50.909 | 385 | 184 | 2 | 10 | 394 | 51 | 430 | 1.86e-137 | 400 |
| Msa1298620 | MtrunA17_Chr6g0448981 | 51.169 | 385 | 184 | 3 | 10 | 394 | 157 | 537 | 3.65e-132 | 390 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298620 | AT5G40200.1 | 83.721 | 387 | 63 | 0 | 10 | 396 | 202 | 588 | 0.0 | 668 |
| Msa1298620 | AT2G47940.2 | 50.909 | 385 | 184 | 2 | 10 | 394 | 191 | 570 | 1.89e-135 | 400 |
| Msa1298620 | AT2G47940.1 | 50.909 | 385 | 184 | 2 | 10 | 394 | 192 | 571 | 1.93e-135 | 400 |
| Msa1298620 | AT5G36950.1 | 50.000 | 386 | 188 | 4 | 10 | 394 | 189 | 570 | 3.16e-124 | 371 |
| Msa1298620 | AT1G65630.1 | 44.041 | 386 | 202 | 3 | 10 | 395 | 171 | 542 | 9.18e-103 | 315 |
| Msa1298620 | AT1G65640.2 | 43.523 | 386 | 199 | 4 | 10 | 395 | 149 | 515 | 2.59e-99 | 305 |
| Msa1298620 | AT5G40560.1 | 42.078 | 385 | 195 | 6 | 10 | 394 | 116 | 472 | 2.56e-87 | 273 |
| Msa1298620 | AT3G16540.1 | 37.922 | 385 | 199 | 4 | 10 | 394 | 186 | 530 | 2.09e-81 | 260 |
| Msa1298620 | AT1G65640.1 | 43.709 | 302 | 156 | 3 | 10 | 311 | 149 | 436 | 7.48e-79 | 249 |
| Msa1298620 | AT3G16550.1 | 37.240 | 384 | 211 | 4 | 10 | 393 | 146 | 499 | 1.25e-75 | 243 |
| Msa1298620 | AT1G51150.1 | 39.744 | 78 | 47 | 0 | 10 | 87 | 132 | 209 | 1.71e-13 | 69.7 |
| Msa1298620 | AT5G54745.1 | 44.928 | 69 | 37 | 1 | 36 | 104 | 125 | 192 | 1.01e-11 | 64.3 |
Find 135 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATGTCGCCTGTGGATTT+TGG | 0.169302 | 8_3:-59453108 | Msa1298620:CDS |
| CCACTGATTGCTGGCCATTA+TGG | 0.184359 | 8_3:-59453414 | Msa1298620:five_prime_UTR |
| CACAGAGCTTCTAGGTTTAC+AGG | 0.192508 | 8_3:-59452965 | Msa1298620:intron |
| TCATCTTTGACAATCATTAA+TGG | 0.200000 | 8_3:-59453486 | Msa1298620:five_prime_UTR |
| TGAAGCTCCAGTCAAGATTT+TGG | 0.209977 | 8_3:-59451162 | Msa1298620:CDS |
| TCTGGTGGACCTGCATTTAA+TGG | 0.215894 | 8_3:-59452827 | Msa1298620:CDS |
| AAGCAAGCCTTTGTTCATTT+TGG | 0.219210 | 8_3:-59453460 | Msa1298620:five_prime_UTR |
| GTGGTTTGGTATCAGTTATT+TGG | 0.240146 | 8_3:-59453523 | Msa1298620:five_prime_UTR |
| CATGGTTCCACAGAGCTTCT+AGG | 0.291078 | 8_3:-59452973 | Msa1298620:CDS |
| CCCTCATATTATATCATTGC+AGG | 0.292872 | 8_3:-59451515 | Msa1298620:CDS |
| GATGTTATCCTTAGCTTTGA+TGG | 0.305411 | 8_3:-59452406 | Msa1298620:CDS |
| GCTATAAATTCTGGAAATTC+TGG | 0.311869 | 8_3:-59452845 | Msa1298620:CDS |
| AAATTCAATATTAAACTTGA+TGG | 0.313467 | 8_3:-59451578 | Msa1298620:CDS |
| CACTGATTGCTGGCCATTAT+GGG | 0.315434 | 8_3:-59453413 | Msa1298620:five_prime_UTR |
| ATAGCATAAATTATTTATAT+TGG | 0.316305 | 8_3:-59453329 | Msa1298620:five_prime_UTR |
| ATAGATGCTGCTATAAATTC+TGG | 0.318166 | 8_3:-59452854 | Msa1298620:CDS |
| GGCTTGCCCTTGCTGTGTGC+TGG | 0.318695 | 8_3:+59451539 | None:intergenic |
| CGGGGTTGAGTGGCAGAAAA+TGG | 0.329262 | 8_3:-59452536 | Msa1298620:CDS |
| GTTATAGGATTCCCTATTCT+CGG | 0.354820 | 8_3:-59452556 | Msa1298620:intron |
| GGTTTCAAAACCTGAGATTC+AGG | 0.356639 | 8_3:+59452433 | None:intergenic |
| GCCACTCAACCCCGAGAATA+GGG | 0.366272 | 8_3:+59452545 | None:intergenic |
| TTGTGCCCACCACTGATTGC+TGG | 0.366965 | 8_3:-59453423 | Msa1298620:five_prime_UTR |
| ATATTCACCTGTTCCATCAT+TGG | 0.367062 | 8_3:+59452372 | None:intergenic |
| CTCCACATCTTCATGTTTGA+GGG | 0.374614 | 8_3:+59452772 | None:intergenic |
| TTTCGTGGGCTCACACTTGT+TGG | 0.387150 | 8_3:-59453387 | Msa1298620:five_prime_UTR |
| CATGAAGATGTGGAGAATAT+AGG | 0.388044 | 8_3:-59452764 | Msa1298620:CDS |
| CTCATATCACAGAAATATAC+TGG | 0.394005 | 8_3:-59451644 | Msa1298620:CDS |
| TTAAACTTGATGGTCATAGA+AGG | 0.395091 | 8_3:-59451568 | Msa1298620:CDS |
| GAGAAGAATGGAGGATATAC+TGG | 0.405802 | 8_3:-59452695 | Msa1298620:intron |
| CCCATTGCCATTCGTAGATC+AGG | 0.406231 | 8_3:+59452508 | None:intergenic |
| ATTACAACAAGTTGTTCATC+TGG | 0.408369 | 8_3:+59451110 | None:intergenic |
| ATGTTATCCTTAGCTTTGAT+GGG | 0.414306 | 8_3:-59452405 | Msa1298620:CDS |
| TTATAGGATTCCCTATTCTC+GGG | 0.416843 | 8_3:-59452555 | Msa1298620:intron |
| GAGATAGTGTCTCCACCAAT+TGG | 0.418659 | 8_3:+59453042 | None:intergenic |
| CTGGTGGCTTCCTGCTACAC+AGG | 0.423896 | 8_3:-59453581 | Msa1298620:five_prime_UTR |
| CGGGATAGCGGCACAGGCCG+TGG | 0.424563 | 8_3:+59453230 | None:intergenic |
| CTGTTGACGATGATGAGTTC+TGG | 0.425115 | 8_3:-59453134 | Msa1298620:CDS |
| TCCTGCAATGATATAATATG+AGG | 0.430469 | 8_3:+59451514 | None:intergenic |
| CCTGTTGTCGCTCTGTGGTT+TGG | 0.431979 | 8_3:-59453537 | Msa1298620:five_prime_UTR |
| TCCTACTTCTCCTGAATCTC+AGG | 0.432674 | 8_3:-59452443 | Msa1298620:CDS |
| GGCCATTATGGGAGCTTTCG+TGG | 0.432848 | 8_3:-59453402 | Msa1298620:five_prime_UTR |
| CCAATCCGGGATAGCGGCAC+AGG | 0.438023 | 8_3:+59453224 | None:intergenic |
| TCTCCACATCTTCATGTTTG+AGG | 0.438460 | 8_3:+59452771 | None:intergenic |
| CTCCATTCTTCTCATAATCC+TGG | 0.444733 | 8_3:+59452705 | None:intergenic |
| ATGCGCTCTCCATGGCGAAA+TGG | 0.455675 | 8_3:+59451680 | None:intergenic |
| TGCCACTCAACCCCGAGAAT+AGG | 0.456310 | 8_3:+59452544 | None:intergenic |
| TCTGTATTTCTGAAGGTCGT+TGG | 0.456981 | 8_3:-59450853 | Msa1298620:intron |
| ACAACTTGTTGTAATTTCTC+AGG | 0.458392 | 8_3:-59451102 | Msa1298620:intron |
| CAAGATGCAGTAACTGTTGT+GGG | 0.465336 | 8_3:-59453069 | Msa1298620:CDS |
| TGGATGAAATGCATGATAAC+TGG | 0.468154 | 8_3:+59452725 | None:intergenic |
| CAACAGTTACTGCATCTTGA+AGG | 0.470221 | 8_3:+59453073 | None:intergenic |
| ATCCAGGATTATGAGAAGAA+TGG | 0.472684 | 8_3:-59452707 | Msa1298620:CDS |
| GAGAAGTTCAGCAACCAATC+CGG | 0.476064 | 8_3:+59453210 | None:intergenic |
| GCCATTATGGGAGCTTTCGT+GGG | 0.479158 | 8_3:-59453401 | Msa1298620:five_prime_UTR |
| AACACTGTAACCTGTGTAGC+AGG | 0.499323 | 8_3:+59453571 | None:intergenic |
| CCAAACCACAGAGCGACAAC+AGG | 0.501786 | 8_3:+59453537 | None:intergenic |
| TCCTGATCTACGAATGGCAA+TGG | 0.502261 | 8_3:-59452509 | Msa1298620:CDS |
| CCTGTGCCGCTATCCCGGAT+TGG | 0.504963 | 8_3:-59453224 | Msa1298620:five_prime_UTR |
| AGATAGTGTCTCCACCAATT+GGG | 0.508039 | 8_3:+59453043 | None:intergenic |
| CAAACCTCAGAACGAAGATA+AGG | 0.514741 | 8_3:+59451467 | None:intergenic |
| AATGGTAAAGGAACCTGTGT+GGG | 0.518960 | 8_3:-59452809 | Msa1298620:CDS |
| GCCCACGAAAGCTCCCATAA+TGG | 0.520573 | 8_3:+59453400 | None:intergenic |
| AGAAGTTCAGCAACCAATCC+GGG | 0.522448 | 8_3:+59453211 | None:intergenic |
| AGTTATCATGCATTTCATCC+AGG | 0.524902 | 8_3:-59452723 | Msa1298620:CDS |
| TCTTAAGAGCTTGGCCGCAA+TGG | 0.525473 | 8_3:-59450806 | Msa1298620:CDS |
| GATATTGCCAATGATGGAAC+AGG | 0.525675 | 8_3:-59452379 | Msa1298620:intron |
| GGACCTGCATTTAATGGTAA+AGG | 0.527175 | 8_3:-59452821 | Msa1298620:CDS |
| ACTGTTGTGGGCTACCCAAT+TGG | 0.529356 | 8_3:-59453057 | Msa1298620:CDS |
| GGGGTTGATATTGCCAATGA+TGG | 0.531777 | 8_3:-59452385 | Msa1298620:CDS |
| CCTGATCTACGAATGGCAAT+GGG | 0.535924 | 8_3:-59452508 | Msa1298620:CDS |
| GTTCCTTTACCATTAAATGC+AGG | 0.539174 | 8_3:+59452818 | None:intergenic |
| ATTTGATTTAGATTATGAGC+AGG | 0.539800 | 8_3:-59450755 | Msa1298620:intron |
| ACCTGAGATTCAGGAGAAGT+AGG | 0.541494 | 8_3:+59452442 | None:intergenic |
| TCCCTATTCTCGGGGTTGAG+TGG | 0.543312 | 8_3:-59452546 | Msa1298620:CDS |
| GGTTCCTTATCTTCGTTCTG+AGG | 0.546360 | 8_3:-59451471 | Msa1298620:intron |
| TTTCGCCATGGAGAGCGCAT+TGG | 0.546950 | 8_3:-59451677 | Msa1298620:CDS |
| GTGTTGCAGCACACTGTAGC+TGG | 0.548910 | 8_3:-59453600 | Msa1298620:five_prime_UTR |
| AGTTTATCCAAAATCTTGAC+TGG | 0.552356 | 8_3:+59451155 | None:intergenic |
| TATCAACCCCATCAAAGCTA+AGG | 0.554345 | 8_3:+59452398 | None:intergenic |
| ATAAATTCTGGAAATTCTGG+TGG | 0.555899 | 8_3:-59452842 | Msa1298620:CDS |
| TCAAGATGCAGTAACTGTTG+TGG | 0.557203 | 8_3:-59453070 | Msa1298620:CDS |
| TGTTATCCTTAGCTTTGATG+GGG | 0.558128 | 8_3:-59452404 | Msa1298620:CDS |
| AGCGGCATGAATTTCAATAG+TGG | 0.561040 | 8_3:-59453622 | None:intergenic |
| AGATCGTCAGACATTGCTGA+TGG | 0.570063 | 8_3:+59450586 | Msa1298610:three_prime_UTR |
| AACAGTTACTGCATCTTGAA+GGG | 0.570653 | 8_3:+59453074 | None:intergenic |
| TAGCGGCACAGGCCGTGGAG+TGG | 0.574414 | 8_3:+59453235 | None:intergenic |
| TGTCAAAGATGAACAGAGGA+GGG | 0.581349 | 8_3:+59453497 | None:intergenic |
| GTTACTGCATCTTGAAGGGT+AGG | 0.582527 | 8_3:+59453078 | None:intergenic |
| GCTTATTCCAGCACACAGCA+AGG | 0.586438 | 8_3:-59451546 | Msa1298620:CDS |
| GTCCCTCAAACATGAAGATG+TGG | 0.589333 | 8_3:-59452774 | Msa1298620:CDS |
| GGCAACTCCCCAAAATCCAC+AGG | 0.590552 | 8_3:+59453099 | None:intergenic |
| AAATGCATGATAACTGGCGT+TGG | 0.591084 | 8_3:+59452731 | None:intergenic |
| TGAAACCAATGCGCTCTCCA+TGG | 0.591141 | 8_3:+59451672 | None:intergenic |
| ATCATCGTCAACAGTAAGCA+TGG | 0.594829 | 8_3:+59453143 | None:intergenic |
| GGAAAATCCTGATCTACGAA+TGG | 0.598308 | 8_3:-59452515 | Msa1298620:CDS |
| CCTGCAATGATATAATATGA+GGG | 0.598553 | 8_3:+59451515 | None:intergenic |
| CTAGAAGCTCTGTGGAACCA+TGG | 0.601251 | 8_3:+59452974 | None:intergenic |
| AGTTGTTCATCTGGTGATTG+TGG | 0.604082 | 8_3:+59451119 | None:intergenic |
| TAATGGCCAGCAATCAGTGG+TGG | 0.605004 | 8_3:+59453417 | None:intergenic |
| TTTCCAGTTCCATTTCGCCA+TGG | 0.606699 | 8_3:-59451689 | Msa1298620:intron |
| TGTGGTCTAACACCACTCCA+CGG | 0.611610 | 8_3:-59453247 | Msa1298620:five_prime_UTR |
| CCATAATGGCCAGCAATCAG+TGG | 0.617912 | 8_3:+59453414 | None:intergenic |
| AATACGTGATACAACGCCAC+TGG | 0.620175 | 8_3:+59453014 | None:intergenic |
| CTTATTCCAGCACACAGCAA+GGG | 0.624783 | 8_3:-59451545 | Msa1298620:CDS |
| GTTGTGGGCTACCCAATTGG+TGG | 0.626711 | 8_3:-59453054 | Msa1298620:CDS |
| CTGGCAAGGGATGTCGCCTG+TGG | 0.627026 | 8_3:-59453115 | Msa1298620:CDS |
| TATAGGATTCCCTATTCTCG+GGG | 0.629454 | 8_3:-59452554 | Msa1298620:intron |
| CAGCAACCAATCCGGGATAG+CGG | 0.629933 | 8_3:+59453218 | None:intergenic |
| ACATGCCTGTTGTCGCTCTG+TGG | 0.630033 | 8_3:-59453542 | Msa1298620:five_prime_UTR |
| GACGATGATGAGTTCTGGCA+AGG | 0.630166 | 8_3:-59453129 | Msa1298620:CDS |
| TTGACACATATAGGTGCTGG+TGG | 0.631847 | 8_3:-59451009 | Msa1298620:intron |
| CAGGATTATGAGAAGAATGG+AGG | 0.632907 | 8_3:-59452704 | Msa1298620:CDS |
| AAGCTAAGGATAACATCTGA+CGG | 0.633148 | 8_3:+59452412 | None:intergenic |
| CATGTATAAACAGTACGGGA+AGG | 0.634604 | 8_3:-59451195 | Msa1298620:intron |
| AATGGCCAGCAATCAGTGGT+GGG | 0.634773 | 8_3:+59453418 | None:intergenic |
| TTGTCAAAGATGAACAGAGG+AGG | 0.635867 | 8_3:+59453496 | None:intergenic |
| TATAGCAATAGTTGATAACA+AGG | 0.645165 | 8_3:+59453277 | None:intergenic |
| ATCACAGCTCTCTACCATTG+CGG | 0.652168 | 8_3:+59450792 | None:intergenic |
| TTGCAGCACACTGTAGCTGG+TGG | 0.652359 | 8_3:-59453597 | Msa1298620:five_prime_UTR |
| GACACTATCTCTGTGACCAG+TGG | 0.655702 | 8_3:-59453030 | Msa1298620:CDS |
| AGGACGGCCAAAATGAACAA+AGG | 0.656323 | 8_3:+59453453 | None:intergenic |
| ATGCAGCAATCAAAGTATTG+CGG | 0.658146 | 8_3:-59451616 | Msa1298620:CDS |
| TGAAGAGATCGTTAACACCC+AGG | 0.659316 | 8_3:-59450967 | Msa1298620:intron |
| CTGGTGGCTGATATTAACAT+CGG | 0.661404 | 8_3:-59450993 | Msa1298620:CDS |
| ATGGTAAAGGAACCTGTGTG+GGG | 0.668814 | 8_3:-59452808 | Msa1298620:CDS |
| ACGATGATGAGTTCTGGCAA+GGG | 0.672265 | 8_3:-59453128 | Msa1298620:CDS |
| GTGGTGGGCACAAGCCTGTG+AGG | 0.679043 | 8_3:+59453433 | None:intergenic |
| GGCATGAAATCTGATCAGAA+AGG | 0.679713 | 8_3:-59452487 | Msa1298620:CDS |
| CTGTAAACCTAGAAGCTCTG+TGG | 0.679911 | 8_3:+59452966 | None:intergenic |
| CTGAAATGCTATCCCCACAC+AGG | 0.690364 | 8_3:+59452796 | None:intergenic |
| TGTTGCAAGAATATCTAGCG+TGG | 0.690556 | 8_3:+59450618 | Msa1298610:three_prime_UTR |
| TAATGGTAAAGGAACCTGTG+TGG | 0.691655 | 8_3:-59452810 | Msa1298620:CDS |
| GCAATGATATAATATGAGGG+AGG | 0.693321 | 8_3:+59451518 | None:intergenic |
| TGATTGTCAAAGATGAACAG+AGG | 0.707840 | 8_3:+59453493 | None:intergenic |
| AGCAATAGTTGATAACAAGG+TGG | 0.734089 | 8_3:+59453280 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGCATAAATTATTTATAT+TGG | - | chr8_3:59450860-59450879 | Msa1298620:intron | 10.0% |
| !!! | TAGAATTTTACTTTTAAATT+GGG | - | chr8_3:59451543-59451562 | Msa1298620:CDS | 10.0% |
| !!! | TTTATATTTTACTTTACTTT+TGG | - | chr8_3:59452897-59452916 | Msa1298620:intron | 10.0% |
| !!! | GTAGAATTTTACTTTTAAAT+TGG | - | chr8_3:59451542-59451561 | Msa1298620:CDS | 15.0% |
| !! | AAATTCAATATTAAACTTGA+TGG | - | chr8_3:59452611-59452630 | Msa1298620:intron | 15.0% |
| !! | AACAGAAAAATGAGAAAATT+TGG | + | chr8_3:59451616-59451635 | None:intergenic | 20.0% |
| !!! | TTTTCTCATTTTTCTGTTAT+AGG | - | chr8_3:59451618-59451637 | Msa1298620:CDS | 20.0% |
| !! | AACAATATGTCTTATGAATT+TGG | - | chr8_3:59452026-59452045 | Msa1298620:intron | 20.0% |
| !! | ACAAACTATTTGAATAGAAT+CGG | - | chr8_3:59452139-59452158 | Msa1298620:intron | 20.0% |
| !! | CTTGTTCATATCTAAATAAA+CGG | + | chr8_3:59452262-59452281 | None:intergenic | 20.0% |
| !! | TTTATTTAGATATGAACAAG+AGG | - | chr8_3:59452262-59452281 | Msa1298620:intron | 20.0% |
| !! | AAATTGAGTTAGAAAAGAAT+GGG | + | chr8_3:59452972-59452991 | None:intergenic | 20.0% |
| !! | AAAATTGAGTTAGAAAAGAA+TGG | + | chr8_3:59452973-59452992 | None:intergenic | 20.0% |
| !!! | TTTTTCATGTATAAACAGTA+CGG | - | chr8_3:59452989-59453008 | Msa1298620:CDS | 20.0% |
| ! | TCATCTTTGACAATCATTAA+TGG | - | chr8_3:59450703-59450722 | Msa1298620:intron | 25.0% |
| ! | AGTGTTCAAAAACATAGTAA+TGG | + | chr8_3:59450831-59450850 | None:intergenic | 25.0% |
| !!! | TATAGCAATAGTTGATAACA+AGG | + | chr8_3:59450915-59450934 | None:intergenic | 25.0% |
| ! | TACATGATATCAACTATGAT+AGG | - | chr8_3:59451935-59451954 | Msa1298620:intron | 25.0% |
| ! | CAAATAGCAAATGTTAAAGA+TGG | + | chr8_3:59452198-59452217 | None:intergenic | 25.0% |
| !!! | CATCTTTAACATTTGCTATT+TGG | - | chr8_3:59452196-59452215 | Msa1298620:intron | 25.0% |
| ! | AGTTTAACAGTCTGTTAATA+AGG | - | chr8_3:59452455-59452474 | Msa1298620:CDS | 25.0% |
| !!! | ATTTGTTTTTTCAACGGTTT+CGG | - | chr8_3:59452697-59452716 | Msa1298620:CDS | 25.0% |
| !!! | ATTAGTTTTTCGTAGAATTC+TGG | - | chr8_3:59452752-59452771 | Msa1298620:CDS | 25.0% |
| ! | ATATAAAGCTGCATATTACA+AGG | + | chr8_3:59452858-59452877 | None:intergenic | 25.0% |
| ! | ATATAAAGCTGCATATAACA+AGG | + | chr8_3:59452884-59452903 | None:intergenic | 25.0% |
| !! | TTTTCATGTATAAACAGTAC+GGG | - | chr8_3:59452990-59453009 | Msa1298620:CDS | 25.0% |
| !!! | CATATTTTTGTTTTCCATGT+TGG | - | chr8_3:59453263-59453282 | Msa1298620:five_prime_UTR | 25.0% |
| !!! | AAGCTCTTAAGATTTTTTAC+AGG | + | chr8_3:59453375-59453394 | None:intergenic | 25.0% |
| ! | TGTAAAAAATCTTAAGAGCT+TGG | - | chr8_3:59453374-59453393 | Msa1298620:five_prime_UTR | 25.0% |
| !! | ATTTGATTTAGATTATGAGC+AGG | - | chr8_3:59453434-59453453 | Msa1298620:five_prime_UTR | 25.0% |
| ! | CTATTGCTATAGCATTTTTG+TGG | - | chr8_3:59450924-59450943 | Msa1298620:intron | 30.0% |
| ! | GAGATTTTATCTTATGTCCA+TGG | - | chr8_3:59451198-59451217 | Msa1298620:intron | 30.0% |
| AAAATTGATGAAGGAAAACC+AGG | + | chr8_3:59451304-59451323 | None:intergenic | 30.0% | |
| GCAAGAAACAAAATTGATGA+AGG | + | chr8_3:59451313-59451332 | None:intergenic | 30.0% | |
| ATAGATGCTGCTATAAATTC+TGG | - | chr8_3:59451335-59451354 | Msa1298620:intron | 30.0% | |
| ! | GCTATAAATTCTGGAAATTC+TGG | - | chr8_3:59451344-59451363 | Msa1298620:intron | 30.0% |
| ! | ATAAATTCTGGAAATTCTGG+TGG | - | chr8_3:59451347-59451366 | Msa1298620:intron | 30.0% |
| !! | ATGTTATCCTTAGCTTTGAT+GGG | - | chr8_3:59451784-59451803 | Msa1298620:intron | 30.0% |
| ! | TAGTTGATATCATGTAGAAC+CGG | + | chr8_3:59451931-59451950 | None:intergenic | 30.0% |
| GTTATCATTGTGTCTAAAAG+AGG | + | chr8_3:59451983-59452002 | None:intergenic | 30.0% | |
| ! | ATTCAAATAGTTTGTCGATG+TGG | + | chr8_3:59452134-59452153 | None:intergenic | 30.0% |
| ATGTTAAAGATGGACAGATA+TGG | + | chr8_3:59452188-59452207 | None:intergenic | 30.0% | |
| !! | TTTGGATTAGTACCATGTTA+TGG | - | chr8_3:59452214-59452233 | Msa1298620:intron | 30.0% |
| TTAGTACCATGTTATGGTTT+AGG | - | chr8_3:59452220-59452239 | Msa1298620:intron | 30.0% | |
| AACAAACCTAAACCATAACA+TGG | + | chr8_3:59452229-59452248 | None:intergenic | 30.0% | |
| TAAAAAGCAGAGAACAACAT+AGG | + | chr8_3:59452377-59452396 | None:intergenic | 30.0% | |
| ! | TTAATAAGGCTTTGTACTCT+TGG | - | chr8_3:59452469-59452488 | Msa1298620:CDS | 30.0% |
| CTCATATCACAGAAATATAC+TGG | - | chr8_3:59452545-59452564 | Msa1298620:CDS | 30.0% | |
| ! | TTAAACTTGATGGTCATAGA+AGG | - | chr8_3:59452621-59452640 | Msa1298620:intron | 30.0% |
| CCTGCAATGATATAATATGA+GGG | + | chr8_3:59452677-59452696 | None:intergenic | 30.0% | |
| TCCTGCAATGATATAATATG+AGG | + | chr8_3:59452678-59452697 | None:intergenic | 30.0% | |
| !!! | TGCAGGATTTGTTTTTTCAA+CGG | - | chr8_3:59452691-59452710 | Msa1298620:intron | 30.0% |
| AGTTTATCCAAAATCTTGAC+TGG | + | chr8_3:59453037-59453056 | None:intergenic | 30.0% | |
| ATTACAACAAGTTGTTCATC+TGG | + | chr8_3:59453082-59453101 | None:intergenic | 30.0% | |
| !! | ACAACTTGTTGTAATTTCTC+AGG | - | chr8_3:59453087-59453106 | Msa1298620:CDS | 30.0% |
| AGAGATACTCAGATACAATA+AGG | + | chr8_3:59453160-59453179 | None:intergenic | 30.0% | |
| AGTATCTCTTTGACACATAT+AGG | - | chr8_3:59453171-59453190 | Msa1298620:CDS | 30.0% | |
| GACAGATTGAGAAATAAAGA+CGG | + | chr8_3:59453461-59453480 | None:intergenic | 30.0% | |
| !! | GTGGTTTGGTATCAGTTATT+TGG | - | chr8_3:59450666-59450685 | Msa1298620:intron | 35.0% |
| TGATTGTCAAAGATGAACAG+AGG | + | chr8_3:59450699-59450718 | None:intergenic | 35.0% | |
| ! | AAGCAAGCCTTTGTTCATTT+TGG | - | chr8_3:59450729-59450748 | Msa1298620:intron | 35.0% |
| !! | AGCAATAGTTGATAACAAGG+TGG | + | chr8_3:59450912-59450931 | None:intergenic | 35.0% |
| AACAGTTACTGCATCTTGAA+GGG | + | chr8_3:59451118-59451137 | None:intergenic | 35.0% | |
| GTTCCTTTACCATTAAATGC+AGG | + | chr8_3:59451374-59451393 | None:intergenic | 35.0% | |
| CATGAAGATGTGGAGAATAT+AGG | - | chr8_3:59451425-59451444 | Msa1298620:intron | 35.0% | |
| TGGATGAAATGCATGATAAC+TGG | + | chr8_3:59451467-59451486 | None:intergenic | 35.0% | |
| AGTTATCATGCATTTCATCC+AGG | - | chr8_3:59451466-59451485 | Msa1298620:intron | 35.0% | |
| ATCCAGGATTATGAGAAGAA+TGG | - | chr8_3:59451482-59451501 | Msa1298620:CDS | 35.0% | |
| GTTATAGGATTCCCTATTCT+CGG | - | chr8_3:59451633-59451652 | Msa1298620:CDS | 35.0% | |
| TTATAGGATTCCCTATTCTC+GGG | - | chr8_3:59451634-59451653 | Msa1298620:CDS | 35.0% | |
| AAGCTAAGGATAACATCTGA+CGG | + | chr8_3:59451780-59451799 | None:intergenic | 35.0% | |
| !! | GATGTTATCCTTAGCTTTGA+TGG | - | chr8_3:59451783-59451802 | Msa1298620:intron | 35.0% |
| !! | TGTTATCCTTAGCTTTGATG+GGG | - | chr8_3:59451785-59451804 | Msa1298620:intron | 35.0% |
| ATATTCACCTGTTCCATCAT+TGG | + | chr8_3:59451820-59451839 | None:intergenic | 35.0% | |
| TAAGCTGCATAATGAGATCT+AGG | + | chr8_3:59452339-59452358 | None:intergenic | 35.0% | |
| GCCAACGTGAAATATATCAA+TGG | - | chr8_3:59452428-59452447 | Msa1298620:CDS | 35.0% | |
| GCCATTGATATATTTCACGT+TGG | + | chr8_3:59452432-59452451 | None:intergenic | 35.0% | |
| !! | ATGCAGCAATCAAAGTATTG+CGG | - | chr8_3:59452573-59452592 | Msa1298620:intron | 35.0% |
| GCAATGATATAATATGAGGG+AGG | + | chr8_3:59452674-59452693 | None:intergenic | 35.0% | |
| CCCTCATATTATATCATTGC+AGG | - | chr8_3:59452674-59452693 | Msa1298620:intron | 35.0% | |
| ! | ACAATATGCTTGCTAGAAGT+TGG | - | chr8_3:59452794-59452813 | Msa1298620:CDS | 35.0% |
| ! | CAATATGCTTGCTAGAAGTT+GGG | - | chr8_3:59452795-59452814 | Msa1298620:CDS | 35.0% |
| AAATTCGCTAAGCTTTCTTG+TGG | - | chr8_3:59452945-59452964 | Msa1298620:intron | 35.0% | |
| AACATTGCTCATATCAACCT+GGG | + | chr8_3:59453242-59453261 | None:intergenic | 35.0% | |
| AAACATTGCTCATATCAACC+TGG | + | chr8_3:59453243-59453262 | None:intergenic | 35.0% | |
| ! | TCTACTCTCTGTATTTCTGA+AGG | - | chr8_3:59453329-59453348 | Msa1298620:five_prime_UTR | 35.0% |
| CTAATCATCTATGCAGATAG+TGG | - | chr8_3:59453521-59453540 | Msa1298620:five_prime_UTR | 35.0% | |
| TGTCAAAGATGAACAGAGGA+GGG | + | chr8_3:59450695-59450714 | None:intergenic | 40.0% | |
| TTGTCAAAGATGAACAGAGG+AGG | + | chr8_3:59450696-59450715 | None:intergenic | 40.0% | |
| ATCATCGTCAACAGTAAGCA+TGG | + | chr8_3:59451049-59451068 | None:intergenic | 40.0% | |
| CAACAGTTACTGCATCTTGA+AGG | + | chr8_3:59451119-59451138 | None:intergenic | 40.0% | |
| TCAAGATGCAGTAACTGTTG+TGG | - | chr8_3:59451119-59451138 | Msa1298620:CDS | 40.0% | |
| CAAGATGCAGTAACTGTTGT+GGG | - | chr8_3:59451120-59451139 | Msa1298620:CDS | 40.0% | |
| AGATAGTGTCTCCACCAATT+GGG | + | chr8_3:59451149-59451168 | None:intergenic | 40.0% | |
| !! | CACCACTAGTTGATGAAAGT+GGG | + | chr8_3:59451266-59451285 | None:intergenic | 40.0% |
| GTGGCTCATTTAATGTATCC+TGG | - | chr8_3:59451283-59451302 | Msa1298620:intron | 40.0% | |
| GGACCTGCATTTAATGGTAA+AGG | - | chr8_3:59451368-59451387 | Msa1298620:intron | 40.0% | |
| TAATGGTAAAGGAACCTGTG+TGG | - | chr8_3:59451379-59451398 | Msa1298620:intron | 40.0% | |
| AATGGTAAAGGAACCTGTGT+GGG | - | chr8_3:59451380-59451399 | Msa1298620:intron | 40.0% | |
| CTCCACATCTTCATGTTTGA+GGG | + | chr8_3:59451420-59451439 | None:intergenic | 40.0% | |
| TCTCCACATCTTCATGTTTG+AGG | + | chr8_3:59451421-59451440 | None:intergenic | 40.0% | |
| AAATGCATGATAACTGGCGT+TGG | + | chr8_3:59451461-59451480 | None:intergenic | 40.0% | |
| CTCCATTCTTCTCATAATCC+TGG | + | chr8_3:59451487-59451506 | None:intergenic | 40.0% | |
| CAGGATTATGAGAAGAATGG+AGG | - | chr8_3:59451485-59451504 | Msa1298620:CDS | 40.0% | |
| GAGAAGAATGGAGGATATAC+TGG | - | chr8_3:59451494-59451513 | Msa1298620:CDS | 40.0% | |
| ! | TGGAGGATATACTGGTAATG+TGG | - | chr8_3:59451502-59451521 | Msa1298620:CDS | 40.0% |
| TATAGGATTCCCTATTCTCG+GGG | - | chr8_3:59451635-59451654 | Msa1298620:CDS | 40.0% | |
| GGAAAATCCTGATCTACGAA+TGG | - | chr8_3:59451674-59451693 | Msa1298620:CDS | 40.0% | |
| GGCATGAAATCTGATCAGAA+AGG | - | chr8_3:59451702-59451721 | Msa1298620:intron | 40.0% | |
| GGTTTCAAAACCTGAGATTC+AGG | + | chr8_3:59451759-59451778 | None:intergenic | 40.0% | |
| TATCAACCCCATCAAAGCTA+AGG | + | chr8_3:59451794-59451813 | None:intergenic | 40.0% | |
| ! | GATATTGCCAATGATGGAAC+AGG | - | chr8_3:59451810-59451829 | Msa1298620:intron | 40.0% |
| ACTATGACGATGAGCAATAC+CGG | + | chr8_3:59452300-59452319 | None:intergenic | 40.0% | |
| TGCATAATGAGATCTAGGAG+TGG | + | chr8_3:59452334-59452353 | None:intergenic | 40.0% | |
| CAAACCTCAGAACGAAGATA+AGG | + | chr8_3:59452725-59452744 | None:intergenic | 40.0% | |
| CTTCTAGCAAGCATATTGTG+AGG | + | chr8_3:59452793-59452812 | None:intergenic | 40.0% | |
| CATGTATAAACAGTACGGGA+AGG | - | chr8_3:59452994-59453013 | Msa1298620:CDS | 40.0% | |
| ! | TGAAGCTCCAGTCAAGATTT+TGG | - | chr8_3:59453027-59453046 | Msa1298620:CDS | 40.0% |
| AGTTGTTCATCTGGTGATTG+TGG | + | chr8_3:59453073-59453092 | None:intergenic | 40.0% | |
| TCTTTGACACATATAGGTGC+TGG | - | chr8_3:59453177-59453196 | Msa1298620:exon | 40.0% | |
| CTGGTGGCTGATATTAACAT+CGG | - | chr8_3:59453196-59453215 | Msa1298620:five_prime_UTR | 40.0% | |
| ! | TCTGTATTTCTGAAGGTCGT+TGG | - | chr8_3:59453336-59453355 | Msa1298620:five_prime_UTR | 40.0% |
| !!! | CTGAAGGTCGTTGGTTTTAA+TGG | - | chr8_3:59453345-59453364 | Msa1298620:five_prime_UTR | 40.0% |
| GTCTTGCGTGCTTAGAAAAA+TGG | - | chr8_3:59453478-59453497 | Msa1298620:five_prime_UTR | 40.0% | |
| TGTTGCAAGAATATCTAGCG+TGG | + | chr8_3:59453574-59453593 | None:intergenic | 40.0% | |
| AACACTGTAACCTGTGTAGC+AGG | + | chr8_3:59450621-59450640 | Msa1298610:three_prime_UTR | 45.0% | |
| AGGACGGCCAAAATGAACAA+AGG | + | chr8_3:59450739-59450758 | None:intergenic | 45.0% | |
| ! | CACTGATTGCTGGCCATTAT+GGG | - | chr8_3:59450776-59450795 | Msa1298620:CDS | 45.0% |
| AGAAGTTCAGCAACCAATCC+GGG | + | chr8_3:59450981-59451000 | None:intergenic | 45.0% | |
| GAGAAGTTCAGCAACCAATC+CGG | + | chr8_3:59450982-59451001 | None:intergenic | 45.0% | |
| CTGTTGACGATGATGAGTTC+TGG | - | chr8_3:59451055-59451074 | Msa1298620:intron | 45.0% | |
| ! | ACGATGATGAGTTCTGGCAA+GGG | - | chr8_3:59451061-59451080 | Msa1298620:intron | 45.0% |
| GTTACTGCATCTTGAAGGGT+AGG | + | chr8_3:59451114-59451133 | None:intergenic | 45.0% | |
| GAGATAGTGTCTCCACCAAT+TGG | + | chr8_3:59451150-59451169 | None:intergenic | 45.0% | |
| AATACGTGATACAACGCCAC+TGG | + | chr8_3:59451178-59451197 | None:intergenic | 45.0% | |
| CTGTAAACCTAGAAGCTCTG+TGG | + | chr8_3:59451226-59451245 | None:intergenic | 45.0% | |
| CACAGAGCTTCTAGGTTTAC+AGG | - | chr8_3:59451224-59451243 | Msa1298620:intron | 45.0% | |
| CACCCACTTTCATCAACTAG+TGG | - | chr8_3:59451261-59451280 | Msa1298620:intron | 45.0% | |
| !! | CCACCACTAGTTGATGAAAG+TGG | + | chr8_3:59451267-59451286 | None:intergenic | 45.0% |
| CCACTTTCATCAACTAGTGG+TGG | - | chr8_3:59451264-59451283 | Msa1298620:intron | 45.0% | |
| ! | TCTGGTGGACCTGCATTTAA+TGG | - | chr8_3:59451362-59451381 | Msa1298620:intron | 45.0% |
| ATGGTAAAGGAACCTGTGTG+GGG | - | chr8_3:59451381-59451400 | Msa1298620:intron | 45.0% | |
| GTCCCTCAAACATGAAGATG+TGG | - | chr8_3:59451415-59451434 | Msa1298620:intron | 45.0% | |
| TCCTGATCTACGAATGGCAA+TGG | - | chr8_3:59451680-59451699 | Msa1298620:CDS | 45.0% | |
| CCTGATCTACGAATGGCAAT+GGG | - | chr8_3:59451681-59451700 | Msa1298620:CDS | 45.0% | |
| TCCTACTTCTCCTGAATCTC+AGG | - | chr8_3:59451746-59451765 | Msa1298620:intron | 45.0% | |
| ACCTGAGATTCAGGAGAAGT+AGG | + | chr8_3:59451750-59451769 | None:intergenic | 45.0% | |
| !! | GGGGTTGATATTGCCAATGA+TGG | - | chr8_3:59451804-59451823 | Msa1298620:intron | 45.0% |
| AGCTACTAAAACACCCCTCA+TGG | - | chr8_3:59451896-59451915 | Msa1298620:intron | 45.0% | |
| GCTACTAAAACACCCCTCAT+GGG | - | chr8_3:59451897-59451916 | Msa1298620:intron | 45.0% | |
| GAGCTCTTCACTGAAGTTCA+AGG | + | chr8_3:59452112-59452131 | None:intergenic | 45.0% | |
| AGATGGACAGATATGGAGAC+TGG | + | chr8_3:59452181-59452200 | None:intergenic | 45.0% | |
| CAAGAGGAGACACAAAACTC+CGG | - | chr8_3:59452278-59452297 | Msa1298620:intron | 45.0% | |
| AGCAGAGAACAACATAGGCA+AGG | + | chr8_3:59452372-59452391 | None:intergenic | 45.0% | |
| !! | GTTAACTAACCAGCTTGCTG+CGG | - | chr8_3:59452406-59452425 | Msa1298620:CDS | 45.0% |
| TTTCCAGTTCCATTTCGCCA+TGG | - | chr8_3:59452500-59452519 | Msa1298620:CDS | 45.0% | |
| CTTATTCCAGCACACAGCAA+GGG | - | chr8_3:59452644-59452663 | Msa1298620:intron | 45.0% | |
| GGTTCCTTATCTTCGTTCTG+AGG | - | chr8_3:59452718-59452737 | Msa1298620:CDS | 45.0% | |
| !! | TTGACACATATAGGTGCTGG+TGG | - | chr8_3:59453180-59453199 | Msa1298620:exon | 45.0% |
| TGAAGAGATCGTTAACACCC+AGG | - | chr8_3:59453222-59453241 | Msa1298620:five_prime_UTR | 45.0% | |
| AGAGTTATCAGCGTCCAACA+TGG | + | chr8_3:59453280-59453299 | None:intergenic | 45.0% | |
| TGTTGGACGCTGATAACTCT+TGG | - | chr8_3:59453280-59453299 | Msa1298620:five_prime_UTR | 45.0% | |
| ATCACAGCTCTCTACCATTG+CGG | + | chr8_3:59453400-59453419 | None:intergenic | 45.0% | |
| AGATCGTCAGACATTGCTGA+TGG | + | chr8_3:59453606-59453625 | None:intergenic | 45.0% | |
| !! | TTCATTTTGGCCGTCCTCAC+AGG | - | chr8_3:59450742-59450761 | Msa1298620:intron | 50.0% |
| AATGGCCAGCAATCAGTGGT+GGG | + | chr8_3:59450774-59450793 | None:intergenic | 50.0% | |
| TAATGGCCAGCAATCAGTGG+TGG | + | chr8_3:59450775-59450794 | None:intergenic | 50.0% | |
| CCATAATGGCCAGCAATCAG+TGG | + | chr8_3:59450778-59450797 | None:intergenic | 50.0% | |
| ! | CCACTGATTGCTGGCCATTA+TGG | - | chr8_3:59450775-59450794 | Msa1298620:CDS | 50.0% |
| GCCATTATGGGAGCTTTCGT+GGG | - | chr8_3:59450788-59450807 | Msa1298620:CDS | 50.0% | |
| TTTCGTGGGCTCACACTTGT+TGG | - | chr8_3:59450802-59450821 | Msa1298620:CDS | 50.0% | |
| TGTGGTCTAACACCACTCCA+CGG | - | chr8_3:59450942-59450961 | Msa1298620:intron | 50.0% | |
| ! | GACGATGATGAGTTCTGGCA+AGG | - | chr8_3:59451060-59451079 | Msa1298620:intron | 50.0% |
| ! | GGATGTCGCCTGTGGATTTT+GGG | - | chr8_3:59451082-59451101 | Msa1298620:intron | 50.0% |
| ! | GATGTCGCCTGTGGATTTTG+GGG | - | chr8_3:59451083-59451102 | Msa1298620:intron | 50.0% |
| ! | ACTGTTGTGGGCTACCCAAT+TGG | - | chr8_3:59451132-59451151 | Msa1298620:CDS | 50.0% |
| GACACTATCTCTGTGACCAG+TGG | - | chr8_3:59451159-59451178 | Msa1298620:CDS | 50.0% | |
| CTAGAAGCTCTGTGGAACCA+TGG | + | chr8_3:59451218-59451237 | None:intergenic | 50.0% | |
| CATGGTTCCACAGAGCTTCT+AGG | - | chr8_3:59451216-59451235 | Msa1298620:intron | 50.0% | |
| CTGAAATGCTATCCCCACAC+AGG | + | chr8_3:59451396-59451415 | None:intergenic | 50.0% | |
| CCCATTGCCATTCGTAGATC+AGG | + | chr8_3:59451684-59451703 | None:intergenic | 50.0% | |
| ACTAAAACACCCCTCATGGG+AGG | - | chr8_3:59451900-59451919 | Msa1298620:intron | 50.0% | |
| GACAGATATGGAGACTGGAG+AGG | + | chr8_3:59452176-59452195 | None:intergenic | 50.0% | |
| TCTCCATGGCGAAATGGAAC+TGG | + | chr8_3:59452506-59452525 | None:intergenic | 50.0% | |
| TGAAACCAATGCGCTCTCCA+TGG | + | chr8_3:59452520-59452539 | None:intergenic | 50.0% | |
| GCTTATTCCAGCACACAGCA+AGG | - | chr8_3:59452643-59452662 | Msa1298620:intron | 50.0% | |
| TCTTAAGAGCTTGGCCGCAA+TGG | - | chr8_3:59453383-59453402 | Msa1298620:five_prime_UTR | 50.0% | |
| ! | CTTTTGCAGTCTTCGTGCGA+AGG | + | chr8_3:59453548-59453567 | None:intergenic | 50.0% |
| GTGTTGCAGCACACTGTAGC+TGG | - | chr8_3:59450589-59450608 | Msa1298620:CDS | 55.0% | |
| TTGCAGCACACTGTAGCTGG+TGG | - | chr8_3:59450592-59450611 | Msa1298620:CDS | 55.0% | |
| ACATGCCTGTTGTCGCTCTG+TGG | - | chr8_3:59450647-59450666 | Msa1298620:CDS | 55.0% | |
| CCAAACCACAGAGCGACAAC+AGG | + | chr8_3:59450655-59450674 | None:intergenic | 55.0% | |
| CCTGTTGTCGCTCTGTGGTT+TGG | - | chr8_3:59450652-59450671 | Msa1298620:CDS | 55.0% | |
| ! | TTGTGCCCACCACTGATTGC+TGG | - | chr8_3:59450766-59450785 | Msa1298620:CDS | 55.0% |
| GGCCATTATGGGAGCTTTCG+TGG | - | chr8_3:59450787-59450806 | Msa1298620:CDS | 55.0% | |
| GCCCACGAAAGCTCCCATAA+TGG | + | chr8_3:59450792-59450811 | None:intergenic | 55.0% | |
| CAGCAACCAATCCGGGATAG+CGG | + | chr8_3:59450974-59450993 | None:intergenic | 55.0% | |
| ! | GGGATGTCGCCTGTGGATTT+TGG | - | chr8_3:59451081-59451100 | Msa1298620:intron | 55.0% |
| GGCAACTCCCCAAAATCCAC+AGG | + | chr8_3:59451093-59451112 | None:intergenic | 55.0% | |
| ! | GTTGTGGGCTACCCAATTGG+TGG | - | chr8_3:59451135-59451154 | Msa1298620:CDS | 55.0% |
| TCCCTATTCTCGGGGTTGAG+TGG | - | chr8_3:59451643-59451662 | Msa1298620:CDS | 55.0% | |
| GCCACTCAACCCCGAGAATA+GGG | + | chr8_3:59451647-59451666 | None:intergenic | 55.0% | |
| TGCCACTCAACCCCGAGAAT+AGG | + | chr8_3:59451648-59451667 | None:intergenic | 55.0% | |
| CGGGGTTGAGTGGCAGAAAA+TGG | - | chr8_3:59451653-59451672 | Msa1298620:CDS | 55.0% | |
| ACCGGTAAGTCCTCCCATGA+GGG | + | chr8_3:59451913-59451932 | None:intergenic | 55.0% | |
| AACCGGTAAGTCCTCCCATG+AGG | + | chr8_3:59451914-59451933 | None:intergenic | 55.0% | |
| ATGCGCTCTCCATGGCGAAA+TGG | + | chr8_3:59452512-59452531 | None:intergenic | 55.0% | |
| ! | TTTCGCCATGGAGAGCGCAT+TGG | - | chr8_3:59452512-59452531 | Msa1298620:CDS | 55.0% |
| CTGGTGGCTTCCTGCTACAC+AGG | - | chr8_3:59450608-59450627 | Msa1298620:CDS | 60.0% | |
| TGGGCACAAGCCTGTGAGGA+CGG | + | chr8_3:59450755-59450774 | None:intergenic | 60.0% | |
| CCGGTAAGTCCTCCCATGAG+GGG | + | chr8_3:59451912-59451931 | None:intergenic | 60.0% | |
| CCCCTCATGGGAGGACTTAC+CGG | - | chr8_3:59451909-59451928 | Msa1298620:intron | 60.0% | |
| !! | GTGGTGGGCACAAGCCTGTG+AGG | + | chr8_3:59450759-59450778 | None:intergenic | 65.0% |
| ! | CCAATCCGGGATAGCGGCAC+AGG | + | chr8_3:59450968-59450987 | None:intergenic | 65.0% |
| ! | CCTGTGCCGCTATCCCGGAT+TGG | - | chr8_3:59450965-59450984 | Msa1298620:intron | 65.0% |
| CTGGCAAGGGATGTCGCCTG+TGG | - | chr8_3:59451074-59451093 | Msa1298620:intron | 65.0% | |
| TCACGTTGGCCGCAGCAAGC+TGG | + | chr8_3:59452418-59452437 | None:intergenic | 65.0% | |
| ! | GGCTTGCCCTTGCTGTGTGC+TGG | + | chr8_3:59452653-59452672 | None:intergenic | 65.0% |
| TAGCGGCACAGGCCGTGGAG+TGG | + | chr8_3:59450957-59450976 | None:intergenic | 70.0% | |
| ! | CACGGCCTGTGCCGCTATCC+CGG | - | chr8_3:59450960-59450979 | Msa1298620:intron | 70.0% |
| ! | CGGGATAGCGGCACAGGCCG+TGG | + | chr8_3:59450962-59450981 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 59450579 | 59453632 | 59450579 | ID=Msa1298620;Name=Msa1298620 |
| chr8_3 | mRNA | 59450579 | 59453632 | 59450579 | ID=Msa1298620-mRNA-1;Parent=Msa1298620;Name=Msa1298620-mRNA-1;_AED=0.10;_eAED=0.10;_QI=439|0.71|0.62|1|1|0.87|8|0|396 |
| chr8_3 | exon | 59450579 | 59450674 | 59450579 | ID=Msa1298620-mRNA-1:exon:17165;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59450756 | 59450860 | 59450756 | ID=Msa1298620-mRNA-1:exon:17164;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59450968 | 59451018 | 59450968 | ID=Msa1298620-mRNA-1:exon:17163;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59451103 | 59451204 | 59451103 | ID=Msa1298620-mRNA-1:exon:17162;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59451472 | 59451704 | 59451472 | ID=Msa1298620-mRNA-1:exon:17161;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59452380 | 59452571 | 59452380 | ID=Msa1298620-mRNA-1:exon:17160;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59452696 | 59452876 | 59452696 | ID=Msa1298620-mRNA-1:exon:17159;Parent=Msa1298620-mRNA-1 |
| chr8_3 | exon | 59452966 | 59453632 | 59452966 | ID=Msa1298620-mRNA-1:exon:17158;Parent=Msa1298620-mRNA-1 |
| chr8_3 | five_prime_UTR | 59453194 | 59453632 | 59453194 | ID=Msa1298620-mRNA-1:five_prime_utr;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59452966 | 59453193 | 59452966 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59452696 | 59452876 | 59452696 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59452380 | 59452571 | 59452380 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59451472 | 59451704 | 59451472 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59451103 | 59451204 | 59451103 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59450968 | 59451018 | 59450968 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59450756 | 59450860 | 59450756 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| chr8_3 | CDS | 59450579 | 59450674 | 59450579 | ID=Msa1298620-mRNA-1:cds;Parent=Msa1298620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
