AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1413380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1413380 MtrunA17_Chr4g0076901 96.459 706 23 1 1 704 1 706 0.0 1379
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1413380 AT5G49880.1 62.397 726 249 6 1 703 1 725 0.0 876

Find 151 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTAGACTATAGAGTTTA+AGG 0.097063 tig0024026:+37594 Msa1413380:three_prime_UTR
AACCACTCTCAGCTCATTTA+AGG 0.127080 tig0024026:-33565 None:intergenic
GAACCTTATCATAAATTTAA+TGG 0.187512 tig0024026:+37567 Msa1413380:exon
AGCTTCACCATTCTTCAAAT+TGG 0.225489 tig0024026:-33361 None:intergenic
AAACATCTAGTTTCATCTTT+TGG 0.232310 tig0024026:+37888 Msa1413380:three_prime_UTR
ATCAGGGAATACCAACATTT+TGG 0.238178 tig0024026:+36128 Msa1413380:CDS
TGCGAAGGTTTGTCTCATTT+TGG 0.238880 tig0024026:-29917 None:intergenic
TTCTACAGGGAGTGATGTTT+TGG 0.261658 tig0024026:+30449 Msa1413380:CDS
CAGCACTTCTATGGTTTGTT+TGG 0.266549 tig0024026:-34614 None:intergenic
AAGTTGCGCCTTTGGGGTTT+GGG 0.269381 tig0024026:+29261 Msa1413380:five_prime_UTR
TGATCATTCACAACTTAAAA+AGG 0.271940 tig0024026:+30049 Msa1413380:CDS
CTTGAATTTGAATATGAATC+AGG 0.287905 tig0024026:+36111 Msa1413380:CDS
AAAGTTGCGCCTTTGGGGTT+TGG 0.300808 tig0024026:+29260 Msa1413380:five_prime_UTR
TGAATAAAAGTTGCGCCTTT+GGG 0.302332 tig0024026:+29254 None:intergenic
TTGAACTGTTTAGGAGAAAC+TGG 0.306116 tig0024026:+35300 Msa1413380:intron
GGAAATTATGATTGAGTGTT+TGG 0.313529 tig0024026:-29636 None:intergenic
TTGAATAAAAGTTGCGCCTT+TGG 0.316012 tig0024026:+29253 None:intergenic
TTCAGAGATATCATTATTAG+AGG 0.326892 tig0024026:+33686 Msa1413380:CDS
GAAAGGATGAAACATGTTAC+AGG 0.330915 tig0024026:-37853 None:intergenic
GACAAAGCAACATCTTTAGA+AGG 0.333909 tig0024026:+29972 Msa1413380:CDS
CTAAAGATGTTGCTTTGTCT+TGG 0.341234 tig0024026:-29968 None:intergenic
GAAACAACTGGAGGTGGCTT+TGG 0.341324 tig0024026:+32470 Msa1413380:CDS
CATTGCAAACCTCTTTGAAT+TGG 0.351624 tig0024026:-30265 None:intergenic
TCAATTAAACACTGAACTTC+AGG 0.351637 tig0024026:+29887 Msa1413380:CDS
GCTCAGATTGTGCCCTTTCC+CGG 0.351664 tig0024026:-31748 None:intergenic
CTTGTTGTAGCTTGAACAAA+TGG 0.366662 tig0024026:+30175 Msa1413380:intron
AGTCCATTAAATTTATGATA+AGG 0.377997 tig0024026:-37570 None:intergenic
TCCCAGGAAGTTTCTTCTAC+AGG 0.379616 tig0024026:+30435 Msa1413380:CDS
CACTGAGAGGAAGAAATCTT+TGG 0.382629 tig0024026:+29749 Msa1413380:CDS
TATTAAAATCAGAGATTAAA+CGG 0.384162 tig0024026:+32559 Msa1413380:CDS
AACTGCTCGCTTGAAACAAC+TGG 0.389194 tig0024026:+32458 Msa1413380:CDS
ATTCTTGCCAATTTGAAGAA+TGG 0.390364 tig0024026:+33354 Msa1413380:CDS
TAAAGATGTTGCTTTGTCTT+GGG 0.400406 tig0024026:-29967 None:intergenic
TCCCTGTAGAAGAAACTTCC+TGG 0.401242 tig0024026:-30437 None:intergenic
CTTTGAATTGGTCCTTAAGA+TGG 0.406182 tig0024026:-30253 None:intergenic
GATTAAACGGATTGAATTAA+CGG 0.416637 tig0024026:+32572 Msa1413380:CDS
TGCTTTGTCTTGGGCGGAAG+CGG 0.418194 tig0024026:-29958 None:intergenic
TTTGGTTAAACAATTGCAAC+AGG 0.422570 tig0024026:+30467 Msa1413380:CDS
TCGTCGGAACGTGGCCTCTT+CGG 0.430638 tig0024026:-29362 None:intergenic
AGAGCAACTGGACCATCTTA+AGG 0.435575 tig0024026:+30241 Msa1413380:CDS
GCTTTGGATGCTGCTGAGAT+TGG 0.436789 tig0024026:+32486 Msa1413380:CDS
GATGAACACCAGCGATCAAA+TGG 0.439362 tig0024026:+36030 Msa1413380:CDS
TGCAGCGTAAATCGTGTCAC+TGG 0.446319 tig0024026:-36057 None:intergenic
ATGCTGTATAGATATCTTCC+AGG 0.456384 tig0024026:+37646 Msa1413380:three_prime_UTR
TTGTTTGGCTTCATTATCTA+CGG 0.458408 tig0024026:-34599 None:intergenic
GGATCCGGCGGCAGCGGTGG+AGG 0.459538 tig0024026:+29412 Msa1413380:CDS
GAAGAATTGAAGAGTCAATC+AGG 0.460323 tig0024026:+34679 Msa1413380:CDS
CATCGGTGCCTGATAGTTGT+GGG 0.460974 tig0024026:+37716 Msa1413380:three_prime_UTR
AGACCTGCTTAAAGAGCAAC+TGG 0.463462 tig0024026:+30229 Msa1413380:CDS
AAGTAGTGCTAATCCCATTC+AGG 0.466808 tig0024026:+33395 Msa1413380:CDS
GGAAAAGAGCCGCCGGGAAA+GGG 0.468010 tig0024026:+31736 Msa1413380:CDS
GAGGGAAATACAACCTGAAT+GGG 0.468113 tig0024026:-33408 None:intergenic
CTGGGATTCCATTTGATCGC+TGG 0.470960 tig0024026:-36038 None:intergenic
CAAGAACTCGCTGCTTCTAA+AGG 0.472308 tig0024026:+29792 Msa1413380:CDS
TCTTCGGTGGCGGAGGAGTA+CGG 0.473231 tig0024026:-29346 None:intergenic
CGTGGCCTCTTCGGTGGCGG+AGG 0.474010 tig0024026:-29353 None:intergenic
ACTCCAGGATCAACTCTTGA+AGG 0.475492 tig0024026:+29827 Msa1413380:CDS
AAGCAGGTCTGCTTCTCTCT+CGG 0.477842 tig0024026:-30216 None:intergenic
GATTCTAGAAATAGAAAAGT+TGG 0.479879 tig0024026:-30075 None:intergenic
CACTGGAGAGGGAGAGTGAC+CGG 0.480225 tig0024026:+33658 Msa1413380:CDS
TGTAAAGCTGCAAATTTAGC+AGG 0.480888 tig0024026:-31881 None:intergenic
AGAGGGAAATACAACCTGAA+TGG 0.481847 tig0024026:-33409 None:intergenic
CACATATCAGTGTCGCCAAA+TGG 0.482171 tig0024026:+29457 Msa1413380:CDS
AGTTGCGCCTTTGGGGTTTG+GGG 0.482750 tig0024026:+29262 Msa1413380:five_prime_UTR
CTATGAGGATCCGGCGGCAG+CGG 0.485300 tig0024026:+29406 Msa1413380:CDS
TCAGCCTGAGGTATCTCGTC+AGG 0.487574 tig0024026:+36347 Msa1413380:CDS
AAGAATAAAGTCACTGGAGA+GGG 0.490630 tig0024026:+33647 Msa1413380:CDS
TGCTTCTAAAGGCCGTGAAA+AGG 0.491539 tig0024026:+29803 Msa1413380:CDS
CCCAGGTTGAGATATTCGTT+CGG 0.491573 tig0024026:+37486 Msa1413380:intron
GGTTCCTCCACCGCTGCCGC+CGG 0.494163 tig0024026:-29416 None:intergenic
ATCTGAGCTATCTAAACTAC+AGG 0.495023 tig0024026:+31763 Msa1413380:CDS
TGAGGATCCGGCGGCAGCGG+TGG 0.495529 tig0024026:+29409 Msa1413380:CDS
GGTCCAGTTGCTCTTTAAGC+AGG 0.500008 tig0024026:-30232 None:intergenic
AGGAAAAGAGCCGCCGGGAA+AGG 0.500081 tig0024026:+31735 Msa1413380:CDS
GTATCTTAATTTCCTCATGT+TGG 0.507329 tig0024026:-33596 None:intergenic
CCCAGGAAGTTTCTTCTACA+GGG 0.507888 tig0024026:+30436 Msa1413380:CDS
GAACGTGGCCTCTTCGGTGG+CGG 0.508356 tig0024026:-29356 None:intergenic
GATATCATTATTAGAGGCAA+AGG 0.509270 tig0024026:+33692 Msa1413380:CDS
GCATCGGTGCCTGATAGTTG+TGG 0.509275 tig0024026:+37715 Msa1413380:three_prime_UTR
GCTTGTTATCTATGAGGATC+CGG 0.510386 tig0024026:+29397 Msa1413380:CDS
AGGCCGTGAAAAGGCACTCC+AGG 0.512926 tig0024026:+29812 Msa1413380:CDS
TTCCTTCTACAGTTAGGTCA+TGG 0.513722 tig0024026:+34526 Msa1413380:intron
AAATCTCACAGCACGCCCTC+CGG 0.515186 tig0024026:-35530 None:intergenic
TCAACATCTTACCAAAATGT+TGG 0.516170 tig0024026:-36139 None:intergenic
TTGAATTTGAATATGAATCA+GGG 0.517570 tig0024026:+36112 Msa1413380:CDS
GAAAGACTCCACTGTTATGT+TGG 0.523713 tig0024026:-37537 None:intergenic
TGCTGGAGGAAAAGAGCCGC+CGG 0.524219 tig0024026:+31729 Msa1413380:CDS
AAGTTCAAAACTCCACCCTC+TGG 0.525027 tig0024026:-37775 None:intergenic
TTTAGGAGAAACTGGAAAGC+TGG 0.527669 tig0024026:+35308 Msa1413380:intron
TCTCTATGGTCTCTGAAAGA+TGG 0.530121 tig0024026:-30004 None:intergenic
GGCGGAAGCGGCATGAGACT+CGG 0.530624 tig0024026:-29946 None:intergenic
GTTATGTTGGCAGTAAAAGC+AGG 0.531953 tig0024026:-37524 None:intergenic
GCTGGTGGAGAGCTACATAT+CGG 0.532673 tig0024026:+35326 Msa1413380:CDS
AGCAAGAAGAATAAAGTCAC+TGG 0.533486 tig0024026:+33641 Msa1413380:CDS
CGCACAGCTTGTTATCTATG+AGG 0.533714 tig0024026:+29391 Msa1413380:CDS
ACCTGGCATCTCATGTTTCG+AGG 0.534847 tig0024026:+31853 Msa1413380:CDS
CCTCCTTCAAGAGTTGATCC+TGG 0.535275 tig0024026:-29830 None:intergenic
TTAAGGAATGATGTTTCTTG+AGG 0.535938 tig0024026:+37611 Msa1413380:three_prime_UTR
ATGATATCTCTGAACGGAGC+CGG 0.537996 tig0024026:-33677 None:intergenic
TAGCTGACTAACTAGTTGCC+TGG 0.538855 tig0024026:-37664 None:intergenic
ACATTGACAACTTACATTAG+CGG 0.540144 tig0024026:-30099 None:intergenic
TCCTCGAAACATGAGATGCC+AGG 0.545495 tig0024026:-31854 None:intergenic
TGAAATTCTGTCTGCAAACA+CGG 0.545580 tig0024026:-35502 None:intergenic
AAGCTGTGCGTCGCCGTCGT+CGG 0.550291 tig0024026:-29378 None:intergenic
AATTTGAAGAATGGTGAAGC+TGG 0.552951 tig0024026:+33363 Msa1413380:CDS
TCGCTTGAAACAACTGGAGG+TGG 0.553739 tig0024026:+32464 Msa1413380:CDS
TTTAACAGTGTTCCAGAGGG+TGG 0.555023 tig0024026:+37763 Msa1413380:three_prime_UTR
CTATATTTGGCAGATTGTGA+TGG 0.562845 tig0024026:+36008 Msa1413380:intron
CCCTGTAGAAGAAACTTCCT+GGG 0.564281 tig0024026:-30436 None:intergenic
TAGAGGATCAAATATCATCA+TGG 0.572164 tig0024026:+31810 Msa1413380:CDS
ACATCTTTAGAAGGGAAGCT+AGG 0.573337 tig0024026:+29981 Msa1413380:CDS
TCGGAACGTGGCCTCTTCGG+TGG 0.574434 tig0024026:-29359 None:intergenic
GAATAAAAGTTGCGCCTTTG+GGG 0.579802 tig0024026:+29255 None:intergenic
CTTACCTGACGAGATACCTC+AGG 0.581003 tig0024026:-36351 None:intergenic
GTGCATAGCATGTGCTCGGA+GGG 0.581042 tig0024026:-29437 None:intergenic
GCGTCGCCGTCGTCGGAACG+TGG 0.584043 tig0024026:-29371 None:intergenic
GTACTCCTCCGCCACCGAAG+AGG 0.584759 tig0024026:+29348 Msa1413380:CDS
ACAAAGCAACATCTTTAGAA+GGG 0.593342 tig0024026:+29973 Msa1413380:CDS
AAGAGGCCACGTTCCGACGA+CGG 0.597548 tig0024026:+29365 Msa1413380:CDS
AATTTACAGTACACAGAAGG+AGG 0.597563 tig0024026:+32428 Msa1413380:CDS
TCTTAAGGACCAATTCAAAG+AGG 0.599055 tig0024026:+30256 Msa1413380:CDS
AAAGGATGAAACATGTTACA+GGG 0.602975 tig0024026:-37852 None:intergenic
GGTAATTTACAGTACACAGA+AGG 0.606067 tig0024026:+32425 Msa1413380:CDS
CACCTTAAATGAGCTGAGAG+TGG 0.608157 tig0024026:+33563 Msa1413380:CDS
GCAGCGTAAATCGTGTCACT+GGG 0.613627 tig0024026:-36056 None:intergenic
GAGACTCGGCTTGTATGCGA+AGG 0.619176 tig0024026:-29932 None:intergenic
GGTTAATAATCGCCAACATG+AGG 0.626687 tig0024026:+33584 Msa1413380:CDS
AGATGTTGCTTTGTCTTGGG+CGG 0.631632 tig0024026:-29964 None:intergenic
GCTGGAGGAAAAGAGCCGCC+GGG 0.633967 tig0024026:+31730 Msa1413380:CDS
GAAGAATAAAGTCACTGGAG+AGG 0.635917 tig0024026:+33646 Msa1413380:CDS
AGTACACAGAAGGAGGGTGA+AGG 0.638528 tig0024026:+32435 Msa1413380:CDS
CACTAGAGAAGCGAGAAGAG+AGG 0.638861 tig0024026:+35382 Msa1413380:CDS
CTAATAATGATATCTCTGAA+CGG 0.639682 tig0024026:-33683 None:intergenic
TAATACAAAAGTTCTGCGGA+TGG 0.640306 tig0024026:+34564 Msa1413380:CDS
AGGAGAAACTGGAAAGCTGG+TGG 0.645216 tig0024026:+35311 Msa1413380:intron
ATATGTGCATAGCATGTGCT+CGG 0.645443 tig0024026:-29441 None:intergenic
TTGAAATCCCCAAACCCCAA+AGG 0.648069 tig0024026:-29269 None:intergenic
TTTGAAGGAGAAACTGCTGG+AGG 0.658729 tig0024026:+31715 Msa1413380:CDS
ATGACATGACAGACACTGAG+AGG 0.659780 tig0024026:+29736 Msa1413380:intron
TGCTCGCTTGAAACAACTGG+AGG 0.661475 tig0024026:+32461 Msa1413380:CDS
TGTGCATAGCATGTGCTCGG+AGG 0.667920 tig0024026:-29438 None:intergenic
TCTTTCAGAGACCATAGAGA+GGG 0.673302 tig0024026:+30007 Msa1413380:CDS
TCATTACACATCTCAGCCTG+AGG 0.681344 tig0024026:+36335 Msa1413380:CDS
CCAGGATCAACTCTTGAAGG+AGG 0.683215 tig0024026:+29830 Msa1413380:CDS
CTGCTAATACAAAAGTTCTG+CGG 0.683446 tig0024026:+34560 Msa1413380:CDS
GCAGCTAGCAGTTGTCACAG+AGG 0.683964 tig0024026:+33314 Msa1413380:intron
ATTTACAGTACACAGAAGGA+GGG 0.690417 tig0024026:+32429 Msa1413380:CDS
TGTTATCTATGAGGATCCGG+CGG 0.704459 tig0024026:+29400 Msa1413380:CDS
CAGATTGTGCCCTTTCCCGG+CGG 0.704598 tig0024026:-31745 None:intergenic
ATCTTTCAGAGACCATAGAG+AGG 0.704981 tig0024026:+30006 Msa1413380:CDS
TTGATGATTAAAGACATACC+TGG 0.713365 tig0024026:+31836 Msa1413380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTTTTATTTTGTGTT+AGG + tig0024026:30657-30676 Msa1413380:intron 10.0%
!!! TTTTATTTTCTTAAATCTTT+TGG + tig0024026:30754-30773 Msa1413380:intron 10.0%
!!! TTTATTTTCTTAAATCTTTT+GGG + tig0024026:30755-30774 Msa1413380:intron 10.0%
!! TGATAAATTAATAAGTTAAA+TGG - tig0024026:33443-33462 None:intergenic 10.0%
!! TAATAATAATAATAAGAGAC+AGG - tig0024026:29526-29545 None:intergenic 15.0%
!!! CACATTATTGTTTTATTAAA+TGG + tig0024026:30680-30699 Msa1413380:intron 15.0%
!! ATAAAGTGAAAAAAAATCAA+TGG - tig0024026:30909-30928 None:intergenic 15.0%
!!! TAATTTTGTAGGATTAAATT+AGG + tig0024026:31491-31510 Msa1413380:intron 15.0%
!! TATTAAAATCAGAGATTAAA+CGG + tig0024026:32559-32578 Msa1413380:CDS 15.0%
!!! TAATTTTTTTCAGAAACTTA+TGG + tig0024026:33726-33745 Msa1413380:intron 15.0%
!! TATAGACGATTTAATAAAAA+AGG - tig0024026:34420-34439 None:intergenic 15.0%
!!! AAATATTTTCAAAATACAGA+AGG + tig0024026:35044-35063 Msa1413380:intron 15.0%
!! TACTATCTTTCAATATAAAA+TGG + tig0024026:35603-35622 Msa1413380:intron 15.0%
!!! TTAAAAATGTTGAATTTTGT+AGG + tig0024026:36188-36207 Msa1413380:intron 15.0%
!!! TAAAAATGTTGAATTTTGTA+GGG + tig0024026:36189-36208 Msa1413380:intron 15.0%
!!! TTTTGTTTTATTTTCATAAC+AGG + tig0024026:36308-36327 Msa1413380:intron 15.0%
!! TGAAAAATATTGCAATATTA+TGG - tig0024026:36381-36400 None:intergenic 15.0%
!!! TTTTTTACTCAAGATATTAT+AGG - tig0024026:37830-37849 None:intergenic 15.0%
!! AATCATAATTTCCAAAAACT+CGG + tig0024026:29646-29665 Msa1413380:CDS 20.0%
!!! TTTCATGTTTCTTTTTTTAG+TGG + tig0024026:30317-30336 Msa1413380:intron 20.0%
!!! TTCATGTTTCTTTTTTTAGT+GGG + tig0024026:30318-30337 Msa1413380:intron 20.0%
!!! TATTGTTTTATTAAATGGTC+TGG + tig0024026:30685-30704 Msa1413380:intron 20.0%
!!! AATCTTTTGGGATATTTTTT+TGG + tig0024026:30767-30786 Msa1413380:intron 20.0%
!! AAAAATCAATGGTATCTTTA+TGG - tig0024026:30898-30917 None:intergenic 20.0%
!! ATATAAGTTAAATTCATCCA+TGG + tig0024026:31139-31158 Msa1413380:intron 20.0%
!!! GTTTCTATTATTATGAGTTT+TGG + tig0024026:31261-31280 Msa1413380:intron 20.0%
!! TGAATAGCAATTATTTGTTT+AGG + tig0024026:31447-31466 Msa1413380:intron 20.0%
!! GAATAGCAATTATTTGTTTA+GGG + tig0024026:31448-31467 Msa1413380:intron 20.0%
!! TTAATCCTACAAAATTAACT+TGG - tig0024026:31488-31507 None:intergenic 20.0%
!!! AGGCTAACTTTTATTTTTTT+TGG + tig0024026:31511-31530 Msa1413380:intron 20.0%
!!! GGCTAACTTTTATTTTTTTT+GGG + tig0024026:31512-31531 Msa1413380:intron 20.0%
!!! GCTAACTTTTATTTTTTTTG+GGG + tig0024026:31513-31532 Msa1413380:intron 20.0%
!!! CTAACTTTTATTTTTTTTGG+GGG + tig0024026:31514-31533 Msa1413380:intron 20.0%
!! CAGATATATATTAACAGAAA+TGG - tig0024026:32219-32238 None:intergenic 20.0%
!!! TGAATTAATGGATTAATCTT+TGG + tig0024026:32760-32779 Msa1413380:intron 20.0%
!! AAGTTATATAGTTAGGTTTA+AGG + tig0024026:32838-32857 Msa1413380:intron 20.0%
!!! AATTTAAGATATATCACGAA+AGG + tig0024026:32885-32904 Msa1413380:intron 20.0%
!!! ATTTAAGATATATCACGAAA+GGG + tig0024026:32886-32905 Msa1413380:intron 20.0%
!! TTTAACACATTCTTTATGAT+TGG + tig0024026:33872-33891 Msa1413380:intron 20.0%
!! TTTACATCATTCTTTATTGA+TGG - tig0024026:34015-34034 None:intergenic 20.0%
!! AAAAAATAGATGTTCAATAG+AGG - tig0024026:34124-34143 None:intergenic 20.0%
!! AATATTAAATCGTCTATATG+AGG + tig0024026:34216-34235 Msa1413380:intron 20.0%
!! ATATTAAATCGTCTATATGA+GGG + tig0024026:34217-34236 Msa1413380:intron 20.0%
!! GATTTAATAAAAAAGGCAAA+GGG - tig0024026:34413-34432 None:intergenic 20.0%
!!! TTATTTTTAGCTGTTTTCAT+AGG - tig0024026:34923-34942 None:intergenic 20.0%
!! TCAAAATATTGTATGTGTTA+AGG + tig0024026:35197-35216 Msa1413380:intron 20.0%
!! AGATAGTAATAAAAAGATTG+AGG - tig0024026:35591-35610 None:intergenic 20.0%
!! TAAAAATAAACCCAGAATAA+TGG - tig0024026:35736-35755 None:intergenic 20.0%
!! TTGAATTTGAATATGAATCA+GGG + tig0024026:36112-36131 Msa1413380:CDS 20.0%
!!! AAAAATTAATTTTTGTGCTG+GGG - tig0024026:36455-36474 None:intergenic 20.0%
!!! CAAAAATTAATTTTTGTGCT+GGG - tig0024026:36456-36475 None:intergenic 20.0%
!!! ACAAAAATTAATTTTTGTGC+TGG - tig0024026:36459-36478 None:intergenic 20.0%
!!! GTTCTGTTTTTTTATGAATA+AGG - tig0024026:37368-37387 None:intergenic 20.0%
!! GAACCTTATCATAAATTTAA+TGG + tig0024026:37567-37586 Msa1413380:exon 20.0%
!! AGTCCATTAAATTTATGATA+AGG - tig0024026:37573-37592 None:intergenic 20.0%
!! TGTTAAAAGTAAAAATGTGA+TGG - tig0024026:37750-37769 None:intergenic 20.0%
!!! TGTTTTTTCTTTCTTTTGAA+AGG - tig0024026:37873-37892 None:intergenic 20.0%
!! TTGATTTTCTGCTTTACTTA+AGG - tig0024026:29593-29612 None:intergenic 25.0%
!!! TTTTAAGTTGTGAATGATCA+TGG - tig0024026:30049-30068 None:intergenic 25.0%
! TGATCATTCACAACTTAAAA+AGG + tig0024026:30049-30068 Msa1413380:CDS 25.0%
!! GATTCTAGAAATAGAAAAGT+TGG - tig0024026:30078-30097 None:intergenic 25.0%
! AGAATGATTGATAGATATGA+AGG - tig0024026:30138-30157 None:intergenic 25.0%
!! TTTGCTTTGTCTTTTATCTT+GGG + tig0024026:30509-30528 Msa1413380:intron 25.0%
!!! ATCTTTTGATTGTTTGTGTA+AGG + tig0024026:30547-30566 Msa1413380:intron 25.0%
! AAAATAAAAAGACACGATTC+AGG - tig0024026:30743-30762 None:intergenic 25.0%
!! AAAAACGCAGTCATATATTT+TGG - tig0024026:30800-30819 None:intergenic 25.0%
! TAAATTTGACACCTGATATT+TGG + tig0024026:30868-30887 Msa1413380:intron 25.0%
! TTTATGGTATTCCAAATATC+AGG - tig0024026:30882-30901 None:intergenic 25.0%
!! TTTCTTCTTCCTTTTCTTTT+AGG + tig0024026:30938-30957 Msa1413380:intron 25.0%
!! TTCTTCTTCCTTTTCTTTTA+GGG + tig0024026:30939-30958 Msa1413380:intron 25.0%
!!! TTTTTCTAAAACTACATGCT+TGG + tig0024026:31115-31134 Msa1413380:intron 25.0%
!!! TTTTCTAAAACTACATGCTT+GGG + tig0024026:31116-31135 Msa1413380:intron 25.0%
! TCTCATATTAGATTGTGTTA+TGG + tig0024026:31422-31441 Msa1413380:intron 25.0%
!!! AATTTTAGGAATCTGAAGTA+AGG + tig0024026:31651-31670 Msa1413380:intron 25.0%
!!! ATTTTAGGAATCTGAAGTAA+GGG + tig0024026:31652-31671 Msa1413380:intron 25.0%
!!! CTAACTTTTTCATATTTGAC+TGG - tig0024026:31793-31812 None:intergenic 25.0%
! GTCAAATATGAAAAAGTTAG+AGG + tig0024026:31793-31812 Msa1413380:CDS 25.0%
!! TAGCATTGAAATATTCTTTC+CGG + tig0024026:31987-32006 Msa1413380:intron 25.0%
! TATAAATCCGTAAAAGGAAA+AGG - tig0024026:32122-32141 None:intergenic 25.0%
!! TCCTTTTACGGATTTATAAA+TGG + tig0024026:32124-32143 Msa1413380:intron 25.0%
!!! GATTAAACGGATTGAATTAA+CGG + tig0024026:32572-32591 Msa1413380:CDS 25.0%
! TAAATCCAAGATTTCAAAGA+TGG - tig0024026:32658-32677 None:intergenic 25.0%
!! GACATCTTGTTATGAATTAA+TGG + tig0024026:32748-32767 Msa1413380:intron 25.0%
!!! TTTTGAGTCCTACTTTATTT+GGG - tig0024026:32820-32839 None:intergenic 25.0%
! GACTCAAAAGTTATATAGTT+AGG + tig0024026:32831-32850 Msa1413380:intron 25.0%
!! TATATAGTTAGGTTTAAGGT+AGG + tig0024026:32842-32861 Msa1413380:intron 25.0%
! ATAGAATGCCCAAAATTTAT+AGG - tig0024026:33164-33183 None:intergenic 25.0%
!!! TTTCTTGCTTATTTTTTCGT+TGG + tig0024026:33478-33497 Msa1413380:intron 25.0%
! CTAATAATGATATCTCTGAA+CGG - tig0024026:33686-33705 None:intergenic 25.0%
! TTCAGAGATATCATTATTAG+AGG + tig0024026:33686-33705 Msa1413380:CDS 25.0%
!!! AACTGTTTCTATGTATGTAT+TGG - tig0024026:33829-33848 None:intergenic 25.0%
!! TTCTAAAAAGTCAGTTAAGT+TGG + tig0024026:33902-33921 Msa1413380:intron 25.0%
! GCTTAAAAACATTTATAGAG+TGG - tig0024026:33940-33959 None:intergenic 25.0%
! TATTAAATCGTCTATATGAG+GGG + tig0024026:34218-34237 Msa1413380:intron 25.0%
! CGATTTAATAAAAAAGGCAA+AGG - tig0024026:34414-34433 None:intergenic 25.0%
! ATAATACAGGCATAAGTAAT+TGG + tig0024026:34770-34789 Msa1413380:intron 25.0%
! TGTTTAGTATCTATCATGTT+TGG + tig0024026:34817-34836 Msa1413380:intron 25.0%
!! TATACAAACATTAGTTTCCT+TGG - tig0024026:34878-34897 None:intergenic 25.0%
! CATATTTCATTTGTGTACTT+AGG - tig0024026:34964-34983 None:intergenic 25.0%
!! AAATTTTACTGACAGAAGTT+AGG + tig0024026:35834-35853 Msa1413380:intron 25.0%
!! AATTTTACTGACAGAAGTTA+GGG + tig0024026:35835-35854 Msa1413380:intron 25.0%
! CTTGAATTTGAATATGAATC+AGG + tig0024026:36111-36130 Msa1413380:CDS 25.0%
! GAAATATCAGAATTTAGAAG+AGG - tig0024026:36831-36850 None:intergenic 25.0%
! TTTATACACCAAAAACCTTT+AGG + tig0024026:37005-37024 Msa1413380:intron 25.0%
! TTATACACCAAAAACCTTTA+GGG + tig0024026:37006-37025 Msa1413380:intron 25.0%
!!! AAACATCTAGTTTCATCTTT+TGG + tig0024026:37888-37907 Msa1413380:three_prime_UTR 25.0%
AAACAAACAAACCAACCATT+TGG - tig0024026:29475-29494 None:intergenic 30.0%
GGAAATTATGATTGAGTGTT+TGG - tig0024026:29639-29658 None:intergenic 30.0%
TCAATTAAACACTGAACTTC+AGG + tig0024026:29887-29906 Msa1413380:CDS 30.0%
!! TAAAGATGTTGCTTTGTCTT+GGG - tig0024026:29970-29989 None:intergenic 30.0%
! ACAAAGCAACATCTTTAGAA+GGG + tig0024026:29973-29992 Msa1413380:CDS 30.0%
ACATTGACAACTTACATTAG+CGG - tig0024026:30102-30121 None:intergenic 30.0%
TTTGGTTAAACAATTGCAAC+AGG + tig0024026:30467-30486 Msa1413380:CDS 30.0%
! GTTTGCTTTGTCTTTTATCT+TGG + tig0024026:30508-30527 Msa1413380:intron 30.0%
CAAACAATCAAAAGATCAAG+AGG - tig0024026:30543-30562 None:intergenic 30.0%
TCAAGTGACATGATCATAAA+TGG + tig0024026:30616-30635 Msa1413380:intron 30.0%
TGGATATATAAGATGAGGTT+TGG + tig0024026:30705-30724 Msa1413380:intron 30.0%
GGATATATAAGATGAGGTTT+GGG + tig0024026:30706-30725 Msa1413380:intron 30.0%
! TCTTCTTCCTTTTCTTTTAG+GGG + tig0024026:30940-30959 Msa1413380:intron 30.0%
!! TTACCAAAGTATTGTTGTGA+AGG + tig0024026:31055-31074 Msa1413380:intron 30.0%
ATATAATAGATGCAACGTTC+AGG - tig0024026:31183-31202 None:intergenic 30.0%
CCAAAAGTGAATTTAACGTT+TGG - tig0024026:31287-31306 None:intergenic 30.0%
! CCAAACGTTAAATTCACTTT+TGG + tig0024026:31284-31303 Msa1413380:intron 30.0%
!! GTTAAATTCACTTTTGGACT+TGG + tig0024026:31290-31309 Msa1413380:intron 30.0%
! TCCTACAAAATTAACTTGGA+CGG - tig0024026:31484-31503 None:intergenic 30.0%
!!! ACTTTTATTTTTTTTGGGGG+AGG + tig0024026:31517-31536 Msa1413380:intron 30.0%
!!! CTTTTATTTTTTTTGGGGGA+GGG + tig0024026:31518-31537 Msa1413380:intron 30.0%
!!! TTTTATTTTTTTTGGGGGAG+GGG + tig0024026:31519-31538 Msa1413380:intron 30.0%
TACATTACTCAGATTACTAC+AGG - tig0024026:31616-31635 None:intergenic 30.0%
CCTAAAATTGCAAAGTTAAC+TGG - tig0024026:31640-31659 None:intergenic 30.0%
! CCAGTTAACTTTGCAATTTT+AGG + tig0024026:31637-31656 Msa1413380:intron 30.0%
TAGAGGATCAAATATCATCA+TGG + tig0024026:31810-31829 Msa1413380:CDS 30.0%
! TTGATGATTAAAGACATACC+TGG + tig0024026:31836-31855 Msa1413380:CDS 30.0%
! AGCATTGAAATATTCTTTCC+GGG + tig0024026:31988-32007 Msa1413380:intron 30.0%
TCATAAACAAAAAGATCACC+CGG - tig0024026:32009-32028 None:intergenic 30.0%
TTCTCAAATATATGACGTCA+AGG - tig0024026:32035-32054 None:intergenic 30.0%
TATTTGAGAAAAGTTCCTAC+TGG + tig0024026:32045-32064 Msa1413380:intron 30.0%
! GAGAGAGAAAAAGTATAACT+AGG - tig0024026:32074-32093 None:intergenic 30.0%
! GACAATACCTTTTCCTTTTA+CGG + tig0024026:32112-32131 Msa1413380:intron 30.0%
GCCATTTATAAATCCGTAAA+AGG - tig0024026:32128-32147 None:intergenic 30.0%
!! ACAATATTCTGGAATGTGTA+TGG + tig0024026:32255-32274 Msa1413380:intron 30.0%
TATCTTCTATAAATGCAGAG+AGG + tig0024026:32404-32423 Msa1413380:intron 30.0%
GGATTTATTATCTGCTATTC+TGG + tig0024026:32671-32690 Msa1413380:intron 30.0%
! TTTGAGTCCTACTTTATTTG+GGG - tig0024026:32819-32838 None:intergenic 30.0%
!! CTTTTGAGTCCTACTTTATT+TGG - tig0024026:32821-32840 None:intergenic 30.0%
ACTTATGTATTTCCTTGGAA+TGG - tig0024026:32973-32992 None:intergenic 30.0%
TTCACACTTATGTATTTCCT+TGG - tig0024026:32978-32997 None:intergenic 30.0%
! AGCAACTGCCTATAAATTTT+GGG + tig0024026:33153-33172 Msa1413380:intron 30.0%
ATTCTTGCCAATTTGAAGAA+TGG + tig0024026:33354-33373 Msa1413380:CDS 30.0%
GTTAAATGGTGACAAATAGA+GGG - tig0024026:33429-33448 None:intergenic 30.0%
AGTTAAATGGTGACAAATAG+AGG - tig0024026:33430-33449 None:intergenic 30.0%
GTATCTTAATTTCCTCATGT+TGG - tig0024026:33599-33618 None:intergenic 30.0%
GATATCATTATTAGAGGCAA+AGG + tig0024026:33692-33711 Msa1413380:CDS 30.0%
ATGCGTATGAAGAAAAAGAA+GGG - tig0024026:33802-33821 None:intergenic 30.0%
! CATTCTTTATTGATGGATCA+AGG - tig0024026:34008-34027 None:intergenic 30.0%
AATCACTCATTAAACAACCT+AGG + tig0024026:34075-34094 Msa1413380:intron 30.0%
ATCACTCATTAAACAACCTA+GGG + tig0024026:34076-34095 Msa1413380:intron 30.0%
TGAAAATGAAAACCAGAAAC+TGG - tig0024026:34483-34502 None:intergenic 30.0%
!! TTGTTTTTCCTTCTACAGTT+AGG + tig0024026:34520-34539 Msa1413380:intron 30.0%
! TTGTTTGGCTTCATTATCTA+CGG - tig0024026:34602-34621 None:intergenic 30.0%
! CACATAACTACAACTTTTCA+AGG - tig0024026:34712-34731 None:intergenic 30.0%
CTTGAAAAGTTGTAGTTATG+TGG + tig0024026:34710-34729 Msa1413380:intron 30.0%
TTGTAGTTATGTGGATTCTA+GGG + tig0024026:34719-34738 Msa1413380:intron 30.0%
GGAAACTAATGTTTGTATAC+AGG + tig0024026:34879-34898 Msa1413380:intron 30.0%
AACTAATGTTTGTATACAGG+AGG + tig0024026:34882-34901 Msa1413380:intron 30.0%
CATATTTCATTTGTGTCCTT+AGG - tig0024026:35100-35119 None:intergenic 30.0%
!!! AGTATATAAGTTGCTGCTTT+TGG + tig0024026:35407-35426 Msa1413380:intron 30.0%
! TGGAAATGTTTTACACGAAA+TGG + tig0024026:35623-35642 Msa1413380:intron 30.0%
! ATCCTGGTAATGATGTAATT+GGG + tig0024026:35700-35719 Msa1413380:intron 30.0%
TAATGATGTAATTGGGAATG+TGG + tig0024026:35707-35726 Msa1413380:intron 30.0%
AATGTGGAAACCATTATTCT+GGG + tig0024026:35723-35742 Msa1413380:intron 30.0%
TGGTTGTCCATAACTATATT+TGG + tig0024026:35995-36014 Msa1413380:intron 30.0%
CAATCTGCCAAATATAGTTA+TGG - tig0024026:36005-36024 None:intergenic 30.0%
TCAACATCTTACCAAAATGT+TGG - tig0024026:36142-36161 None:intergenic 30.0%
! AAACAATATTTTCCGCTACA+AGG - tig0024026:36520-36539 None:intergenic 30.0%
AAGAAATAGAGGAAAATGGA+AGG + tig0024026:37327-37346 Msa1413380:intron 30.0%
AGAAATAGAGGAAAATGGAA+GGG + tig0024026:37328-37347 Msa1413380:intron 30.0%
GTCTTAGACTATAGAGTTTA+AGG + tig0024026:37594-37613 Msa1413380:three_prime_UTR 30.0%
TTAAGGAATGATGTTTCTTG+AGG + tig0024026:37611-37630 Msa1413380:three_prime_UTR 30.0%
AAAGGATGAAACATGTTACA+GGG - tig0024026:37855-37874 None:intergenic 30.0%
! TATATGTCGTACCGAGTTTT+TGG - tig0024026:29660-29679 None:intergenic 35.0%
!! CTAAAGATGTTGCTTTGTCT+TGG - tig0024026:29971-29990 None:intergenic 35.0%
GACAAAGCAACATCTTTAGA+AGG + tig0024026:29972-29991 Msa1413380:CDS 35.0%
!!! TCTCTTTTTTTCCCTCTCTA+TGG - tig0024026:30021-30040 None:intergenic 35.0%
! CTTGTTGTAGCTTGAACAAA+TGG + tig0024026:30175-30194 Msa1413380:intron 35.0%
CTTTGAATTGGTCCTTAAGA+TGG - tig0024026:30256-30275 None:intergenic 35.0%
TCTTAAGGACCAATTCAAAG+AGG + tig0024026:30256-30275 Msa1413380:CDS 35.0%
CATTGCAAACCTCTTTGAAT+TGG - tig0024026:30268-30287 None:intergenic 35.0%
TGACATGATCATAAATGGAG+AGG + tig0024026:30621-30640 Msa1413380:intron 35.0%
TGGTCTGGATATATAAGATG+AGG + tig0024026:30700-30719 Msa1413380:intron 35.0%
! AAAGAGAAGGGTACAAACAA+GGG - tig0024026:30984-31003 None:intergenic 35.0%
TGAAGGAGCTTGATATCAAT+TGG + tig0024026:31072-31091 Msa1413380:intron 35.0%
GAAGGAGCTTGATATCAATT+GGG + tig0024026:31073-31092 Msa1413380:intron 35.0%
! CTATTTTATCTCTAGGTCCA+TGG - tig0024026:31159-31178 None:intergenic 35.0%
CATGGACCTAGAGATAAAAT+AGG + tig0024026:31157-31176 Msa1413380:intron 35.0%
! TTCAGGCCTATTTTATCTCT+AGG - tig0024026:31166-31185 None:intergenic 35.0%
! TGATGGTGTTCGGTATAAAT+TGG + tig0024026:31217-31236 Msa1413380:intron 35.0%
GATGGTGTTCGGTATAAATT+GGG + tig0024026:31218-31237 Msa1413380:intron 35.0%
TGTTCATGCATAATATGCGT+AGG + tig0024026:31387-31406 Msa1413380:intron 35.0%
GTTCATGCATAATATGCGTA+GGG + tig0024026:31388-31407 Msa1413380:intron 35.0%
! AAAATTAACTTGGACGGTGA+GGG - tig0024026:31478-31497 None:intergenic 35.0%
! ACCGTCCAAGTTAATTTTGT+AGG + tig0024026:31480-31499 Msa1413380:intron 35.0%
GTTTATGATGAGAATGCATC+TGG - tig0024026:31583-31602 None:intergenic 35.0%
ATCTGAGCTATCTAAACTAC+AGG + tig0024026:31763-31782 Msa1413380:CDS 35.0%
TGTAAAGCTGCAAATTTAGC+AGG - tig0024026:31884-31903 None:intergenic 35.0%
!! AAAGGTATTGTCAAGTCACA+TGG - tig0024026:32104-32123 None:intergenic 35.0%
GTAAACGATGCACAATATTC+TGG + tig0024026:32244-32263 Msa1413380:intron 35.0%
TCTCAATGTGAAAAGATCCT+AGG - tig0024026:32281-32300 None:intergenic 35.0%
! AGGATCTTTTCACATTGAGA+TGG + tig0024026:32281-32300 Msa1413380:intron 35.0%
!!! ACATTGAGATGGCTTTTTTG+TGG + tig0024026:32292-32311 Msa1413380:intron 35.0%
!!! CATTGAGATGGCTTTTTTGT+GGG + tig0024026:32293-32312 Msa1413380:intron 35.0%
!!! ATTGAGATGGCTTTTTTGTG+GGG + tig0024026:32294-32313 Msa1413380:intron 35.0%
GGTAATTTACAGTACACAGA+AGG + tig0024026:32425-32444 Msa1413380:CDS 35.0%
AATTTACAGTACACAGAAGG+AGG + tig0024026:32428-32447 Msa1413380:CDS 35.0%
ATTTACAGTACACAGAAGGA+GGG + tig0024026:32429-32448 Msa1413380:CDS 35.0%
CAAGATTTCAAAGATGGCAA+TGG - tig0024026:32652-32671 None:intergenic 35.0%
!! CATTGCCATCTTTGAAATCT+TGG + tig0024026:32650-32669 Msa1413380:intron 35.0%
GTTAATGACGTTCAATGATC+TGG + tig0024026:32789-32808 Msa1413380:intron 35.0%
! TTGAGTCCTACTTTATTTGG+GGG - tig0024026:32818-32837 None:intergenic 35.0%
! TAGTTAGGTTTAAGGTAGGA+AGG + tig0024026:32846-32865 Msa1413380:intron 35.0%
AAAGGGATTTAGATGCTAGA+TGG + tig0024026:32903-32922 Msa1413380:intron 35.0%
CTTAAATGTCATGCCTAGAA+TGG + tig0024026:32935-32954 Msa1413380:intron 35.0%
TGATTATCTTGTCATGCTTC+TGG + tig0024026:33098-33117 Msa1413380:intron 35.0%
!! GCTTCTGGTGTATTTTGAAA+AGG + tig0024026:33113-33132 Msa1413380:intron 35.0%
TTGAAAAGGTTGAATGCTAC+TGG + tig0024026:33127-33146 Msa1413380:intron 35.0%
TGAAAAGGTTGAATGCTACT+GGG + tig0024026:33128-33147 Msa1413380:intron 35.0%
! CAGCAACTGCCTATAAATTT+TGG + tig0024026:33152-33171 Msa1413380:intron 35.0%
AGCTTCACCATTCTTCAAAT+TGG - tig0024026:33364-33383 None:intergenic 35.0%
AATTTGAAGAATGGTGAAGC+TGG + tig0024026:33363-33382 Msa1413380:CDS 35.0%
!!! ATTTTTTCGTTGGTCCATTC+AGG + tig0024026:33488-33507 Msa1413380:intron 35.0%
! AGATGATTCAAGTTCCTGAA+TGG - tig0024026:33505-33524 None:intergenic 35.0%
AGCAAGAAGAATAAAGTCAC+TGG + tig0024026:33641-33660 Msa1413380:CDS 35.0%
AAGAATAAAGTCACTGGAGA+GGG + tig0024026:33647-33666 Msa1413380:CDS 35.0%
TCATTATTAGAGGCAAAGGT+TGG + tig0024026:33696-33715 Msa1413380:intron 35.0%
CATGCGTATGAAGAAAAAGA+AGG - tig0024026:33803-33822 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - tig0024026:34314-34333 None:intergenic 35.0%
ACTGTGTACAATACACCAAA+TGG + tig0024026:34335-34354 Msa1413380:intron 35.0%
TGTACAATACACCAAATGGT+GGG + tig0024026:34339-34358 Msa1413380:intron 35.0%
CTGCTAATACAAAAGTTCTG+CGG + tig0024026:34560-34579 Msa1413380:CDS 35.0%
TAATACAAAAGTTCTGCGGA+TGG + tig0024026:34564-34583 Msa1413380:CDS 35.0%
! TTCATTTTGCAGCACTTCTA+TGG - tig0024026:34626-34645 None:intergenic 35.0%
GAAGAATTGAAGAGTCAATC+AGG + tig0024026:34679-34698 Msa1413380:CDS 35.0%
GTTGTAGTTATGTGGATTCT+AGG + tig0024026:34718-34737 Msa1413380:intron 35.0%
TCTATCATGTTTGGATTGCT+TGG + tig0024026:34826-34845 Msa1413380:intron 35.0%
! AAGCTTTGATAAACCTTCCA+AGG + tig0024026:34858-34877 Msa1413380:intron 35.0%
! CAAACATTAGTTTCCTTGGA+AGG - tig0024026:34874-34893 None:intergenic 35.0%
AGCAGAGAAAAATCAACCTA+AGG + tig0024026:34945-34964 Msa1413380:intron 35.0%
TTGAACTGTTTAGGAGAAAC+TGG + tig0024026:35300-35319 Msa1413380:intron 35.0%
TGAAATTCTGTCTGCAAACA+CGG - tig0024026:35505-35524 None:intergenic 35.0%
! CAGACAGAATTTCAGTTTTC+CGG + tig0024026:35511-35530 Msa1413380:CDS 35.0%
!!! CTGTGAGATTTTTGGTTACA+AGG + tig0024026:35542-35561 Msa1413380:CDS 35.0%
!!! GAGATTTTTGGTTACAAGGT+TGG + tig0024026:35546-35565 Msa1413380:intron 35.0%
TGGAAAATATTGTAGCATCC+TGG + tig0024026:35684-35703 Msa1413380:intron 35.0%
! CATCCTGGTAATGATGTAAT+TGG + tig0024026:35699-35718 Msa1413380:intron 35.0%
TTCCCAATTACATCATTACC+AGG - tig0024026:35705-35724 None:intergenic 35.0%
GAATGTGGAAACCATTATTC+TGG + tig0024026:35722-35741 Msa1413380:intron 35.0%
GTAAGTGGTTTCTATAACAC+AGG + tig0024026:35796-35815 Msa1413380:intron 35.0%
GGTTGTCAGCTTATCTAATT+TGG - tig0024026:35941-35960 None:intergenic 35.0%
AGTGTGAGCAAAAAGACAAT+CGG - tig0024026:35962-35981 None:intergenic 35.0%
! ATTGTCTTTTTGCTCACACT+TGG + tig0024026:35962-35981 Msa1413380:intron 35.0%
CTATATTTGGCAGATTGTGA+TGG + tig0024026:36008-36027 Msa1413380:intron 35.0%
! ATCAGGGAATACCAACATTT+TGG + tig0024026:36128-36147 Msa1413380:CDS 35.0%
! CTTTGTTGTGCATCATAGAA+AGG + tig0024026:36576-36595 Msa1413380:intron 35.0%
TTTGTTTGAGTCACAACTTC+CGG + tig0024026:36883-36902 Msa1413380:intron 35.0%
! AAATTAGTAATGGAGCTCTC+CGG - tig0024026:36905-36924 None:intergenic 35.0%
! AAACACACCCTAAAGGTTTT+TGG - tig0024026:37016-37035 None:intergenic 35.0%
!! AAAAACCTTTAGGGTGTGTT+TGG + tig0024026:37015-37034 Msa1413380:intron 35.0%
AAGCCTAAGGGTCTATATTT+GGG - tig0024026:37240-37259 None:intergenic 35.0%
TAAGCCTAAGGGTCTATATT+TGG - tig0024026:37241-37260 None:intergenic 35.0%
CAAACAAAGCTTAAGCCTAA+GGG - tig0024026:37252-37271 None:intergenic 35.0%
GAAAAAAAGGAATGAGCAAG+TGG + tig0024026:37304-37323 Msa1413380:intron 35.0%
GTGGAAGAAATAGAGGAAAA+TGG + tig0024026:37323-37342 Msa1413380:intron 35.0%
GAAATAGAGGAAAATGGAAG+GGG + tig0024026:37329-37348 Msa1413380:intron 35.0%
AAACAGAACAAGTGTGTACA+TGG + tig0024026:37379-37398 Msa1413380:intron 35.0%
! TTTTACTGCCAACATAACAG+TGG + tig0024026:37529-37548 Msa1413380:CDS 35.0%
ATGCTGTATAGATATCTTCC+AGG + tig0024026:37646-37665 Msa1413380:three_prime_UTR 35.0%
! TACTTTTAACAGTGTTCCAG+AGG + tig0024026:37759-37778 Msa1413380:three_prime_UTR 35.0%
! ACTTTTAACAGTGTTCCAGA+GGG + tig0024026:37760-37779 Msa1413380:three_prime_UTR 35.0%
GAAAGGATGAAACATGTTAC+AGG - tig0024026:37856-37875 None:intergenic 35.0%
!! TAGTTTCATCTTTTGGTTGC+TGG + tig0024026:37895-37914 Msa1413380:three_prime_UTR 35.0%
!! GCTTGTTATCTATGAGGATC+CGG + tig0024026:29397-29416 Msa1413380:CDS 40.0%
ATATGTGCATAGCATGTGCT+CGG - tig0024026:29444-29463 None:intergenic 40.0%
TTATTATTCGAACGCAACGC+AGG + tig0024026:29546-29565 Msa1413380:intron 40.0%
TGTCTGTCATGTCATGTTGA+TGG - tig0024026:29731-29750 None:intergenic 40.0%
CACTGAGAGGAAGAAATCTT+TGG + tig0024026:29749-29768 Msa1413380:CDS 40.0%
! TGCGAAGGTTTGTCTCATTT+TGG - tig0024026:29920-29939 None:intergenic 40.0%
! ACATCTTTAGAAGGGAAGCT+AGG + tig0024026:29981-30000 Msa1413380:CDS 40.0%
! TCTCTATGGTCTCTGAAAGA+TGG - tig0024026:30007-30026 None:intergenic 40.0%
ATCTTTCAGAGACCATAGAG+AGG + tig0024026:30006-30025 Msa1413380:CDS 40.0%
TCTTTCAGAGACCATAGAGA+GGG + tig0024026:30007-30026 Msa1413380:CDS 40.0%
! TCTTTTCAGCTTCAGTCTTC+TGG - tig0024026:30398-30417 None:intergenic 40.0%
! TTCTACAGGGAGTGATGTTT+TGG + tig0024026:30449-30468 Msa1413380:CDS 40.0%
ATATAAGATGAGGTTTGGGC+AGG + tig0024026:30710-30729 Msa1413380:intron 40.0%
AAGCACACCCCTAAAAGAAA+AGG - tig0024026:30950-30969 None:intergenic 40.0%
! AAGAGAAGGGTACAAACAAG+GGG - tig0024026:30983-31002 None:intergenic 40.0%
! CAAAGAGAAGGGTACAAACA+AGG - tig0024026:30985-31004 None:intergenic 40.0%
CAAAACACCAGCAAAGAGAA+GGG - tig0024026:30996-31015 None:intergenic 40.0%
TCAAAACACCAGCAAAGAGA+AGG - tig0024026:30997-31016 None:intergenic 40.0%
GCTCCTTCACAACAATACTT+TGG - tig0024026:31061-31080 None:intergenic 40.0%
!!! ATTGGGCTGGTCTTTTTACT+TGG + tig0024026:31090-31109 Msa1413380:intron 40.0%
TATCCATAGCCATGTTGTGA+TGG + tig0024026:31200-31219 Msa1413380:intron 40.0%
AGTACAAACCAAAAAACCCG+AGG + tig0024026:31341-31360 Msa1413380:intron 40.0%
!!! TGGTATTTCCTCGGGTTTTT+TGG - tig0024026:31352-31371 None:intergenic 40.0%
! AAATTAACTTGGACGGTGAG+GGG - tig0024026:31477-31496 None:intergenic 40.0%
! CAAAATTAACTTGGACGGTG+AGG - tig0024026:31479-31498 None:intergenic 40.0%
! CGAGAACATTGAGCTTTTGA+AGG + tig0024026:31700-31719 Msa1413380:CDS 40.0%
AATGCTATTACTCCAGACAG+TGG - tig0024026:31974-31993 None:intergenic 40.0%
AGTATAACTAGGAGACCAGT+AGG - tig0024026:32063-32082 None:intergenic 40.0%
TGTCAAGTCACATGGAACAT+TGG - tig0024026:32096-32115 None:intergenic 40.0%
GATGATAGCATGCACATGAA+TGG - tig0024026:32197-32216 None:intergenic 40.0%
!!! TGGCTTTTTTGTGGGGTTTT+TGG + tig0024026:32301-32320 Msa1413380:intron 40.0%
!!! GGCTTTTTTGTGGGGTTTTT+GGG + tig0024026:32302-32321 Msa1413380:intron 40.0%
ATATTGACAGCTGCCTTACA+TGG + tig0024026:32353-32372 Msa1413380:intron 40.0%
ATGTGCTTACTGACCATGTA+AGG - tig0024026:32369-32388 None:intergenic 40.0%
AGTGTAGGACATGCATTTAG+AGG + tig0024026:32705-32724 Msa1413380:intron 40.0%
! TGAGTCCTACTTTATTTGGG+GGG - tig0024026:32817-32836 None:intergenic 40.0%
TAGGAAGGAGTTTGACAGTT+GGG + tig0024026:32861-32880 Msa1413380:intron 40.0%
AAGTAGTGCTAATCCCATTC+AGG + tig0024026:33395-33414 Msa1413380:CDS 40.0%
GAGGGAAATACAACCTGAAT+GGG - tig0024026:33411-33430 None:intergenic 40.0%
AGAGGGAAATACAACCTGAA+TGG - tig0024026:33412-33431 None:intergenic 40.0%
AACCACTCTCAGCTCATTTA+AGG - tig0024026:33568-33587 None:intergenic 40.0%
GGTTAATAATCGCCAACATG+AGG + tig0024026:33584-33603 Msa1413380:CDS 40.0%
GAAGAATAAAGTCACTGGAG+AGG + tig0024026:33646-33665 Msa1413380:CDS 40.0%
GCTACAAACAATGTAACCCT+AGG - tig0024026:34095-34114 None:intergenic 40.0%
TAGAGTTGTTGTCATGTGAC+TGG + tig0024026:34259-34278 Msa1413380:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + tig0024026:34307-34326 Msa1413380:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + tig0024026:34308-34327 Msa1413380:intron 40.0%
GTGTACAATACACCAAATGG+TGG + tig0024026:34338-34357 Msa1413380:intron 40.0%
TTCCTTCTACAGTTAGGTCA+TGG + tig0024026:34526-34545 Msa1413380:intron 40.0%
!! CAGCACTTCTATGGTTTGTT+TGG - tig0024026:34617-34636 None:intergenic 40.0%
! TGTTTTCATAGGAACCCTCT+TGG - tig0024026:34912-34931 None:intergenic 40.0%
AACCAGTGATGTTAAGAGAG+AGG - tig0024026:35019-35038 None:intergenic 40.0%
AACCAGTGATGTTAAGACAG+AGG - tig0024026:35164-35183 None:intergenic 40.0%
CCTAAACAGTTCAAGTGATC+AGG - tig0024026:35294-35313 None:intergenic 40.0%
CCTGATCACTTGAACTGTTT+AGG + tig0024026:35291-35310 Msa1413380:intron 40.0%
TTTAGGAGAAACTGGAAAGC+TGG + tig0024026:35308-35327 Msa1413380:intron 40.0%
! ACAGAATTTCAGTTTTCCGG+AGG + tig0024026:35514-35533 Msa1413380:CDS 40.0%
! CAGAATTTCAGTTTTCCGGA+GGG + tig0024026:35515-35534 Msa1413380:CDS 40.0%
AAGCATGCTTCTGTTGTAAG+TGG + tig0024026:35781-35800 Msa1413380:intron 40.0%
AACACAGGTCATCTTGAGTT+TGG + tig0024026:35811-35830 Msa1413380:intron 40.0%
TCACACTTGGAATGCTTACA+TGG + tig0024026:35975-35994 Msa1413380:intron 40.0%
CAGGAAAAACTTCCTTGTAG+CGG + tig0024026:36505-36524 Msa1413380:intron 40.0%
TGTGTTTGGACGGATAGTAT+AGG + tig0024026:37029-37048 Msa1413380:intron 40.0%
TTTGGACGGATAGTATAGGA+GGG + tig0024026:37033-37052 Msa1413380:intron 40.0%
TATATTTGGGAGGAGGGTTT+AGG - tig0024026:37227-37246 None:intergenic 40.0%
GCAAACAAAGCTTAAGCCTA+AGG - tig0024026:37253-37272 None:intergenic 40.0%
! AGGGGAGGACTTTGAAAAAA+AGG + tig0024026:37291-37310 Msa1413380:intron 40.0%
TGAGCAAGTGGAAGAAATAG+AGG + tig0024026:37316-37335 Msa1413380:intron 40.0%
GTTATGTTGGCAGTAAAAGC+AGG - tig0024026:37527-37546 None:intergenic 40.0%
GAAAGACTCCACTGTTATGT+TGG - tig0024026:37540-37559 None:intergenic 40.0%
!! TTTTCAAGCCCACAACTATC+AGG - tig0024026:37727-37746 None:intergenic 40.0%
!! TCATCTTTTGGTTGCTGGTT+AGG + tig0024026:37900-37919 Msa1413380:three_prime_UTR 40.0%
TTGAAATCCCCAAACCCCAA+AGG - tig0024026:29272-29291 None:intergenic 45.0%
!! CGCACAGCTTGTTATCTATG+AGG + tig0024026:29391-29410 Msa1413380:CDS 45.0%
TGTTATCTATGAGGATCCGG+CGG + tig0024026:29400-29419 Msa1413380:CDS 45.0%
CACATATCAGTGTCGCCAAA+TGG + tig0024026:29457-29476 Msa1413380:CDS 45.0%
TATCAGTGTCGCCAAATGGT+TGG + tig0024026:29461-29480 Msa1413380:intron 45.0%
ATGACATGACAGACACTGAG+AGG + tig0024026:29736-29755 Msa1413380:intron 45.0%
CAAGAACTCGCTGCTTCTAA+AGG + tig0024026:29792-29811 Msa1413380:CDS 45.0%
! TGCTTCTAAAGGCCGTGAAA+AGG + tig0024026:29803-29822 Msa1413380:CDS 45.0%
ACTCCAGGATCAACTCTTGA+AGG + tig0024026:29827-29846 Msa1413380:CDS 45.0%
!! AGATGTTGCTTTGTCTTGGG+CGG - tig0024026:29967-29986 None:intergenic 45.0%
AGACCTGCTTAAAGAGCAAC+TGG + tig0024026:30229-30248 Msa1413380:CDS 45.0%
AGAGCAACTGGACCATCTTA+AGG + tig0024026:30241-30260 Msa1413380:CDS 45.0%
CTGGTGCAAACACTGGAAAT+AGG - tig0024026:30379-30398 None:intergenic 45.0%
!!! GCTAGCAACTTTTTCATCCC+AGG + tig0024026:30419-30438 Msa1413380:CDS 45.0%
TCCCAGGAAGTTTCTTCTAC+AGG + tig0024026:30435-30454 Msa1413380:CDS 45.0%
CCCTGTAGAAGAAACTTCCT+GGG - tig0024026:30439-30458 None:intergenic 45.0%
CCCAGGAAGTTTCTTCTACA+GGG + tig0024026:30436-30455 Msa1413380:CDS 45.0%
TCCCTGTAGAAGAAACTTCC+TGG - tig0024026:30440-30459 None:intergenic 45.0%
GTTTGTACCCTTCTCTTTGC+TGG + tig0024026:30986-31005 Msa1413380:intron 45.0%
GAGCTTGATATCAATTGGGC+TGG + tig0024026:31077-31096 Msa1413380:intron 45.0%
ACACCATCACAACATGGCTA+TGG - tig0024026:31206-31225 None:intergenic 45.0%
! AGCCATGTTGTGATGGTGTT+CGG + tig0024026:31207-31226 Msa1413380:intron 45.0%
TACCGAACACCATCACAACA+TGG - tig0024026:31212-31231 None:intergenic 45.0%
!! GCTTTTGAAGGAGAAACTGC+TGG + tig0024026:31712-31731 Msa1413380:CDS 45.0%
TTTGAAGGAGAAACTGCTGG+AGG + tig0024026:31715-31734 Msa1413380:CDS 45.0%
!! TTCTGGAATGTGTATGGCCT+AGG + tig0024026:32261-32280 Msa1413380:intron 45.0%
AACTGCTCGCTTGAAACAAC+TGG + tig0024026:32458-32477 Msa1413380:CDS 45.0%
CTGGATATCCAAGCTAGTGT+AGG + tig0024026:32690-32709 Msa1413380:intron 45.0%
ATGCATGTCCTACACTAGCT+TGG - tig0024026:32701-32720 None:intergenic 45.0%
GTAGGAAGGAGTTTGACAGT+TGG + tig0024026:32860-32879 Msa1413380:intron 45.0%
AGGAAGGAGTTTGACAGTTG+GGG + tig0024026:32862-32881 Msa1413380:intron 45.0%
GGGATTTAGATGCTAGATGG+AGG + tig0024026:32906-32925 Msa1413380:intron 45.0%
TAGATGCTAGATGGAGGAGA+TGG + tig0024026:32912-32931 Msa1413380:intron 45.0%
GTGTGATGCAAGTCCATTCT+AGG - tig0024026:32951-32970 None:intergenic 45.0%
ACTTGCATCACACCATTCCA+AGG + tig0024026:32958-32977 Msa1413380:intron 45.0%
GCTGCATGCTGTGATAATAG+TGG + tig0024026:33205-33224 Msa1413380:intron 45.0%
CACCTTAAATGAGCTGAGAG+TGG + tig0024026:33563-33582 Msa1413380:CDS 45.0%
ATGATATCTCTGAACGGAGC+CGG - tig0024026:33680-33699 None:intergenic 45.0%
!! GGATCAAGGAAAAGCATCTG+AGG - tig0024026:33994-34013 None:intergenic 45.0%
GTCTATATGAGGGGTAACCT+TGG + tig0024026:34227-34246 Msa1413380:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + tig0024026:34263-34282 Msa1413380:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - tig0024026:34303-34322 None:intergenic 45.0%
AAAAAAGGCAAAGGGCAACC+CGG - tig0024026:34405-34424 None:intergenic 45.0%
AACCAGAAACTGGACAGCTT+GGG - tig0024026:34473-34492 None:intergenic 45.0%
AAACCAGAAACTGGACAGCT+TGG - tig0024026:34474-34493 None:intergenic 45.0%
! TATACAGGAGGTATGCCAAG+AGG + tig0024026:34894-34913 Msa1413380:intron 45.0%
! ATACAGGAGGTATGCCAAGA+GGG + tig0024026:34895-34914 Msa1413380:intron 45.0%
GACCTCTCTCTTAACATCAC+TGG + tig0024026:35014-35033 Msa1413380:intron 45.0%
GACCTCTGTCTTAACATCAC+TGG + tig0024026:35159-35178 Msa1413380:intron 45.0%
TTGTATGTGTTAAGGCCTCG+AGG + tig0024026:35205-35224 Msa1413380:intron 45.0%
CAGTTCAAGTGATCAGGCAA+CGG - tig0024026:35288-35307 None:intergenic 45.0%
CGAAGATCTCACACTTTGCT+TGG + tig0024026:35664-35683 Msa1413380:intron 45.0%
GATGAACACCAGCGATCAAA+TGG + tig0024026:36030-36049 Msa1413380:CDS 45.0%
ATTATCTGCAAGCCTGCAAG+CGG - tig0024026:36223-36242 None:intergenic 45.0%
TTGCAGGCTTGCAGATAATC+AGG + tig0024026:36224-36243 Msa1413380:intron 45.0%
TCATTACACATCTCAGCCTG+AGG + tig0024026:36335-36354 Msa1413380:CDS 45.0%
!! ACCTTTAGGGTGTGTTTGGA+CGG + tig0024026:37019-37038 Msa1413380:intron 45.0%
GTTTGGACGGATAGTATAGG+AGG + tig0024026:37032-37051 Msa1413380:intron 45.0%
TTGGACGGATAGTATAGGAG+GGG + tig0024026:37034-37053 Msa1413380:intron 45.0%
AGGGTCTATATTTGGGAGGA+GGG - tig0024026:37233-37252 None:intergenic 45.0%
AAGGGTCTATATTTGGGAGG+AGG - tig0024026:37234-37253 None:intergenic 45.0%
CCTAAGGGTCTATATTTGGG+AGG - tig0024026:37237-37256 None:intergenic 45.0%
CCTCCCAAATATAGACCCTT+AGG + tig0024026:37234-37253 Msa1413380:intron 45.0%
!! AGCTTTGTTTGCGAGTCTGA+AGG + tig0024026:37261-37280 Msa1413380:intron 45.0%
TTTGCGAGTCTGAAGGTGAA+GGG + tig0024026:37268-37287 Msa1413380:intron 45.0%
ATAGAGGAAAATGGAAGGGG+AGG + tig0024026:37332-37351 Msa1413380:intron 45.0%
TAGAGGAAAATGGAAGGGGA+GGG + tig0024026:37333-37352 Msa1413380:intron 45.0%
ACTTGTGATTGTGCATTCCC+AGG + tig0024026:37469-37488 Msa1413380:intron 45.0%
CCGAACGAATATCTCAACCT+GGG - tig0024026:37489-37508 None:intergenic 45.0%
! CCCAGGTTGAGATATTCGTT+CGG + tig0024026:37486-37505 Msa1413380:intron 45.0%
TCCGAACGAATATCTCAACC+TGG - tig0024026:37490-37509 None:intergenic 45.0%
TAGCTGACTAACTAGTTGCC+TGG - tig0024026:37667-37686 None:intergenic 45.0%
! CTTTTGCAGCATTCTCGCAT+CGG + tig0024026:37699-37718 Msa1413380:three_prime_UTR 45.0%
TTTAACAGTGTTCCAGAGGG+TGG + tig0024026:37763-37782 Msa1413380:three_prime_UTR 45.0%
AAGTTCAAAACTCCACCCTC+TGG - tig0024026:37778-37797 None:intergenic 45.0%
!! TTTATATTATATTATGTTTA+AGG + tig0024026:36164-36183 Msa1413380:intron 5.0%
!! TTATATTATATTATGTTTAA+GGG + tig0024026:36165-36184 Msa1413380:intron 5.0%
!!! TTAATATTTTGTATTAATTA+TGG + tig0024026:36705-36724 Msa1413380:intron 5.0%
!! AAAAAAAAAAAAATTAGTAA+TGG - tig0024026:36915-36934 None:intergenic 5.0%
!!! ACTTTTTTATTTTTAAATTA+AGG + tig0024026:37064-37083 Msa1413380:intron 5.0%
!! AAAGTTGCGCCTTTGGGGTT+TGG + tig0024026:29260-29279 Msa1413380:five_prime_UTR 50.0%
!! AAGTTGCGCCTTTGGGGTTT+GGG + tig0024026:29261-29280 Msa1413380:five_prime_UTR 50.0%
!! GATCCTGGAGTGCCTTTTCA+CGG - tig0024026:29818-29837 None:intergenic 50.0%
! CCTCCTTCAAGAGTTGATCC+TGG - tig0024026:29833-29852 None:intergenic 50.0%
CCAGGATCAACTCTTGAAGG+AGG + tig0024026:29830-29849 Msa1413380:CDS 50.0%
AAGCAGGTCTGCTTCTCTCT+CGG - tig0024026:30219-30238 None:intergenic 50.0%
GGTCCAGTTGCTCTTTAAGC+AGG - tig0024026:30235-30254 None:intergenic 50.0%
CAGTCTTCTGGTGCAAACAC+TGG - tig0024026:30386-30405 None:intergenic 50.0%
! TGATCGCGCTGGTATTTCCT+CGG - tig0024026:31361-31380 None:intergenic 50.0%
ACCTGGCATCTCATGTTTCG+AGG + tig0024026:31853-31872 Msa1413380:CDS 50.0%
TCCTCGAAACATGAGATGCC+AGG - tig0024026:31857-31876 None:intergenic 50.0%
AGTACACAGAAGGAGGGTGA+AGG + tig0024026:32435-32454 Msa1413380:CDS 50.0%
TGCTCGCTTGAAACAACTGG+AGG + tig0024026:32461-32480 Msa1413380:CDS 50.0%
TCGCTTGAAACAACTGGAGG+TGG + tig0024026:32464-32483 Msa1413380:CDS 50.0%
GAAACAACTGGAGGTGGCTT+TGG + tig0024026:32470-32489 Msa1413380:CDS 50.0%
! GCTTTGGATGCTGCTGAGAT+TGG + tig0024026:32486-32505 Msa1413380:CDS 50.0%
TGGAGCCCCCCAAATAAAGT+AGG + tig0024026:32809-32828 Msa1413380:intron 50.0%
!! TTAGAGGCAAAGGTTGGTGC+TGG + tig0024026:33702-33721 Msa1413380:intron 50.0%
!! TAGAGGCAAAGGTTGGTGCT+GGG + tig0024026:33703-33722 Msa1413380:intron 50.0%
GTCATGTGACTGGAAGGTCA+CGG + tig0024026:34269-34288 Msa1413380:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + tig0024026:34270-34289 Msa1413380:intron 50.0%
CGCCATGACCTAACTGTAGA+AGG - tig0024026:34531-34550 None:intergenic 50.0%
ATGTGTTAAGGCCTCGAGGA+CGG + tig0024026:35209-35228 Msa1413380:intron 50.0%
TATTCAGCTTTCCGTCCTCG+AGG - tig0024026:35223-35242 None:intergenic 50.0%
AGGAGAAACTGGAAAGCTGG+TGG + tig0024026:35311-35330 Msa1413380:intron 50.0%
GCTGGTGGAGAGCTACATAT+CGG + tig0024026:35326-35345 Msa1413380:CDS 50.0%
CACTAGAGAAGCGAGAAGAG+AGG + tig0024026:35382-35401 Msa1413380:CDS 50.0%
! AGGGCGTGCTGTGAGATTTT+TGG + tig0024026:35534-35553 Msa1413380:CDS 50.0%
CTGGGATTCCATTTGATCGC+TGG - tig0024026:36041-36060 None:intergenic 50.0%
! GCAGCGTAAATCGTGTCACT+GGG - tig0024026:36059-36078 None:intergenic 50.0%
TGCAGCGTAAATCGTGTCAC+TGG - tig0024026:36060-36079 None:intergenic 50.0%
TTATCTGCAAGCCTGCAAGC+GGG - tig0024026:36222-36241 None:intergenic 50.0%
CTTACCTGACGAGATACCTC+AGG - tig0024026:36354-36373 None:intergenic 50.0%
! CTGAGGTATCTCGTCAGGTA+AGG + tig0024026:36352-36371 Msa1413380:intron 50.0%
! TTTTGTGCGCATGAGAGCGA+AGG + tig0024026:36471-36490 Msa1413380:intron 50.0%
TTTGTGCGCATGAGAGCGAA+GGG + tig0024026:36472-36491 Msa1413380:intron 50.0%
TCCGTCCAAACACACCCTAA+AGG - tig0024026:37023-37042 None:intergenic 50.0%
GTTTGCGAGTCTGAAGGTGA+AGG + tig0024026:37267-37286 Msa1413380:intron 50.0%
AAAATGGAAGGGGAGGGCTT+TGG + tig0024026:37339-37358 Msa1413380:intron 50.0%
AAATGGAAGGGGAGGGCTTT+GGG + tig0024026:37340-37359 Msa1413380:intron 50.0%
! CATCGGTGCCTGATAGTTGT+GGG + tig0024026:37716-37735 Msa1413380:three_prime_UTR 50.0%
!! AGTTGCGCCTTTGGGGTTTG+GGG + tig0024026:29262-29281 Msa1413380:five_prime_UTR 55.0%
GTGCATAGCATGTGCTCGGA+GGG - tig0024026:29440-29459 None:intergenic 55.0%
TGTGCATAGCATGTGCTCGG+AGG - tig0024026:29441-29460 None:intergenic 55.0%
! GAGACTCGGCTTGTATGCGA+AGG - tig0024026:29935-29954 None:intergenic 55.0%
TGCTTTGTCTTGGGCGGAAG+CGG - tig0024026:29961-29980 None:intergenic 55.0%
AGATGAGGTTTGGGCAGGCT+TGG + tig0024026:30715-30734 Msa1413380:intron 55.0%
! GATCGCGCTGGTATTTCCTC+GGG - tig0024026:31360-31379 None:intergenic 55.0%
GAACAGAAGCTTGATCGCGC+TGG - tig0024026:31372-31391 None:intergenic 55.0%
GCTCAGATTGTGCCCTTTCC+CGG - tig0024026:31751-31770 None:intergenic 55.0%
GAGCTGTTGAAGCCACTGTC+TGG + tig0024026:31959-31978 Msa1413380:intron 55.0%
GCAGCTAGCAGTTGTCACAG+AGG + tig0024026:33314-33333 Msa1413380:intron 55.0%
CAACTCTACCAGTTGCGCCA+AGG - tig0024026:34247-34266 None:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+GGG - tig0024026:34378-34397 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - tig0024026:34379-34398 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + tig0024026:34383-34402 Msa1413380:intron 55.0%
CACCCAAGCTGTCCAGTTTC+TGG + tig0024026:34468-34487 Msa1413380:intron 55.0%
AAATCTCACAGCACGCCCTC+CGG - tig0024026:35533-35552 None:intergenic 55.0%
! TCAGCCTGAGGTATCTCGTC+AGG + tig0024026:36347-36366 Msa1413380:CDS 55.0%
TTGTGCGCATGAGAGCGAAG+GGG + tig0024026:36473-36492 Msa1413380:intron 55.0%
GACGGATAGTATAGGAGGGG+AGG + tig0024026:37037-37056 Msa1413380:intron 55.0%
CGAGTCTGAAGGTGAAGGGA+GGG + tig0024026:37272-37291 Msa1413380:intron 55.0%
GAGTCTGAAGGTGAAGGGAG+GGG + tig0024026:37273-37292 Msa1413380:intron 55.0%
AATGGAAGGGGAGGGCTTTG+GGG + tig0024026:37341-37360 Msa1413380:intron 55.0%
! GCATCGGTGCCTGATAGTTG+TGG + tig0024026:37715-37734 Msa1413380:three_prime_UTR 55.0%
!! TCTTCGGTGGCGGAGGAGTA+CGG - tig0024026:29349-29368 None:intergenic 60.0%
TCGTCGGAACGTGGCCTCTT+CGG - tig0024026:29365-29384 None:intergenic 60.0%
AAGAGGCCACGTTCCGACGA+CGG + tig0024026:29365-29384 Msa1413380:CDS 60.0%
!! AGGCCGTGAAAAGGCACTCC+AGG + tig0024026:29812-29831 Msa1413380:CDS 60.0%
!! GGGGGAGGGGTGTCAATACT+TGG + tig0024026:31532-31551 Msa1413380:intron 60.0%
TGCTGGAGGAAAAGAGCCGC+CGG + tig0024026:31729-31748 Msa1413380:CDS 60.0%
AGGAAAAGAGCCGCCGGGAA+AGG + tig0024026:31735-31754 Msa1413380:CDS 60.0%
GGAAAAGAGCCGCCGGGAAA+GGG + tig0024026:31736-31755 Msa1413380:CDS 60.0%
CAGATTGTGCCCTTTCCCGG+CGG - tig0024026:31748-31767 None:intergenic 60.0%
CACTGGAGAGGGAGAGTGAC+CGG + tig0024026:33658-33677 Msa1413380:CDS 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + tig0024026:34236-34255 Msa1413380:intron 60.0%
AAGGTCACGGGTTCGAGTCC+TGG + tig0024026:34282-34301 Msa1413380:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + tig0024026:34351-34370 Msa1413380:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + tig0024026:34384-34403 Msa1413380:intron 60.0%
AGGGACTAACACCCGCTTGC+AGG + tig0024026:36208-36227 Msa1413380:intron 60.0%
TGTGCGCATGAGAGCGAAGG+GGG + tig0024026:36474-36493 Msa1413380:intron 60.0%
GCGAGTCTGAAGGTGAAGGG+AGG + tig0024026:37271-37290 Msa1413380:intron 60.0%
TCTGAAGGTGAAGGGAGGGG+AGG + tig0024026:37276-37295 Msa1413380:intron 60.0%
! ATGGAAGGGGAGGGCTTTGG+GGG + tig0024026:37342-37361 Msa1413380:intron 60.0%
GTACTCCTCCGCCACCGAAG+AGG + tig0024026:29348-29367 Msa1413380:CDS 65.0%
GAACGTGGCCTCTTCGGTGG+CGG - tig0024026:29359-29378 None:intergenic 65.0%
TCGGAACGTGGCCTCTTCGG+TGG - tig0024026:29362-29381 None:intergenic 65.0%
AAGCTGTGCGTCGCCGTCGT+CGG - tig0024026:29381-29400 None:intergenic 65.0%
CTATGAGGATCCGGCGGCAG+CGG + tig0024026:29406-29425 Msa1413380:CDS 65.0%
GGCGGAAGCGGCATGAGACT+CGG - tig0024026:29949-29968 None:intergenic 65.0%
GCTGGAGGAAAAGAGCCGCC+GGG + tig0024026:31730-31749 Msa1413380:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - tig0024026:34353-34372 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - tig0024026:34366-34385 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - tig0024026:34367-34386 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + tig0024026:34366-34385 Msa1413380:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + tig0024026:34367-34386 Msa1413380:intron 65.0%
GTGCGCATGAGAGCGAAGGG+GGG + tig0024026:36475-36494 Msa1413380:intron 65.0%
AGCGAAGGGGGGAGCTTAGC+AGG + tig0024026:36486-36505 Msa1413380:intron 65.0%
CGCATACGCAGGGTCCGGGA+AGG - tig0024026:34368-34387 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - tig0024026:34372-34391 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - tig0024026:34373-34392 None:intergenic 70.0%
! CGTGGCCTCTTCGGTGGCGG+AGG - tig0024026:29356-29375 None:intergenic 75.0%
GCGTCGCCGTCGTCGGAACG+TGG - tig0024026:29374-29393 None:intergenic 75.0%
TGAGGATCCGGCGGCAGCGG+TGG + tig0024026:29409-29428 Msa1413380:CDS 75.0%
GGTTCCTCCACCGCTGCCGC+CGG - tig0024026:29419-29438 None:intergenic 75.0%
! GGATCCGGCGGCAGCGGTGG+AGG + tig0024026:29412-29431 Msa1413380:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0024026 gene 29259 38000 29259 ID=Msa1413380;Name=Msa1413380
tig0024026 mRNA 29259 38000 29259 ID=Msa1413380-mRNA-1;Parent=Msa1413380;Name=Msa1413380-mRNA-1;_AED=0.07;_eAED=0.07;_QI=79|1|1|1|1|1|15|420|704
tig0024026 exon 29259 29478 29259 ID=Msa1413380-mRNA-1:exon:21092;Parent=Msa1413380-mRNA-1
tig0024026 exon 29568 29667 29568 ID=Msa1413380-mRNA-1:exon:21093;Parent=Msa1413380-mRNA-1
tig0024026 exon 29748 30106 29748 ID=Msa1413380-mRNA-1:exon:21094;Parent=Msa1413380-mRNA-1
tig0024026 exon 30185 30277 30185 ID=Msa1413380-mRNA-1:exon:21095;Parent=Msa1413380-mRNA-1
tig0024026 exon 30387 30503 30387 ID=Msa1413380-mRNA-1:exon:21096;Parent=Msa1413380-mRNA-1
tig0024026 exon 31659 31906 31659 ID=Msa1413380-mRNA-1:exon:21097;Parent=Msa1413380-mRNA-1
tig0024026 exon 32422 32593 32422 ID=Msa1413380-mRNA-1:exon:21098;Parent=Msa1413380-mRNA-1
tig0024026 exon 33318 33416 33318 ID=Msa1413380-mRNA-1:exon:21099;Parent=Msa1413380-mRNA-1
tig0024026 exon 33510 33713 33510 ID=Msa1413380-mRNA-1:exon:21100;Parent=Msa1413380-mRNA-1
tig0024026 exon 34538 34700 34538 ID=Msa1413380-mRNA-1:exon:21101;Parent=Msa1413380-mRNA-1
tig0024026 exon 35313 35403 35313 ID=Msa1413380-mRNA-1:exon:21102;Parent=Msa1413380-mRNA-1
tig0024026 exon 35494 35563 35494 ID=Msa1413380-mRNA-1:exon:21103;Parent=Msa1413380-mRNA-1
tig0024026 exon 36021 36149 36021 ID=Msa1413380-mRNA-1:exon:21104;Parent=Msa1413380-mRNA-1
tig0024026 exon 36330 36368 36330 ID=Msa1413380-mRNA-1:exon:21105;Parent=Msa1413380-mRNA-1
tig0024026 exon 37491 38000 37491 ID=Msa1413380-mRNA-1:exon:21106;Parent=Msa1413380-mRNA-1
tig0024026 five_prime_UTR 29259 29337 29259 ID=Msa1413380-mRNA-1:five_prime_utr;Parent=Msa1413380-mRNA-1
tig0024026 CDS 29338 29478 29338 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 29568 29667 29568 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 29748 30106 29748 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 30185 30277 30185 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 30387 30503 30387 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 31659 31906 31659 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 32422 32593 32422 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 33318 33416 33318 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 33510 33713 33510 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 34538 34700 34538 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 35313 35403 35313 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 35494 35563 35494 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 36021 36149 36021 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 36330 36368 36330 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 CDS 37491 37580 37491 ID=Msa1413380-mRNA-1:cds;Parent=Msa1413380-mRNA-1
tig0024026 three_prime_UTR 37581 38000 37581 ID=Msa1413380-mRNA-1:three_prime_utr;Parent=Msa1413380-mRNA-1
Gene Sequence

>Msa1413380

ATGATACTCCGTACTCCTCCGCCACCGAAGAGGCCACGTTCCGACGACGGCGACGCACAGCTTGTTATCTATGAGGATCCGGCGGCAGCGGTGGAGGAACCCTCCGAGCACATGCTATGCACATATCAGTGTCGCCAAATGGTTAAATCTGATTTTCTAGATGCCTTAAGTAAAGCAGAAAATCAAATTCGTGATTATCAATCTCAATTCCAAACACTCAATCATAATTTCCAAAAACTCGACACTGAGAGGAAGAAATCTTTGGAGCAATTGTTATACACTGAACAAGAACTCGCTGCTTCTAAAGGCCGTGAAAAGGCACTCCAGGATCAACTCTTGAAGGAGGTTACTGATTCTCAAGATAGACTTAGAAAATATATTCAATTAAACACTGAACTTCAGGCTAAGCTCCAAAATGAGACAAACCTTCGCATACAAGCCGAGTCTCATGCCGCTTCCGCCCAAGACAAAGCAACATCTTTAGAAGGGAAGCTAGGCCATCTTTCAGAGACCATAGAGAGGGAAAAAAAGAGACTTCACCATGATCATTCACAACTTAAAAAGGACTCCAACTTTTCTATTTCTAGAATCACCGCTAATCTTGAACAAATGGAATGCAGAGCTAATAATGCCGAGAGAGAAGCAGACCTGCTTAAAGAGCAACTGGACCATCTTAAGGACCAATTCAAAGAGTGTTTGCACCAGAAGACTGAAGCTGAAAAGAAGCTAGCAACTTTTTCATCCCAGGAAGTTTCTTCTACAGGGAGTGATGTTTTGGTTAAACAATTGCAACAGGAACTTCAACATTATGAATCTGAAGTAAGGGAAGCACGAAAACTAAGATCAAATCACGAGAACATTGAGCTTTTGAAGGAGAAACTGCTGGAGGAAAAGAGCCGCCGGGAAAGGGCACAATCTGAGCTATCTAAACTACAGGATGTCCAGTCAAATATGAAAAAGTTAGAGGATCAAATATCATCATGGAGATTGATGATTAAAGACATACCTGGCATCTCATGTTTCGAGGACATGCCTGCTAAATTTGCAGCTTTACAGAAAGAGGTAATTTACAGTACACAGAAGGAGGGTGAAGGAACTGCTCGCTTGAAACAACTGGAGGTGGCTTTGGATGCTGCTGAGATTGGTAAACAAAATGCTGAAACTGAAGCTGTGTTGTATAAAGAGAAAGCAGAAGTATTAAAATCAGAGATTAAACGGATTGAATTAACGCTAGCAGTTGTCACAGAGGAAAGAAACAAATTAAGAATTCTTGCCAATTTGAAGAATGGTGAAGCTGGAGATGAATCAAGTAGTGCTAATCCCATTCAGGAACTTGAATCATCTCTTATGAAGAAAGATGAATATATTAAAGAACTAGAAAGCACCTTAAATGAGCTGAGAGTGGTTAATAATCGCCAACATGAGGAAATTAAGATACTCAACGAAAAATTGCACAATGAAGCAAGAAGAATAAAGTCACTGGAGAGGGAGAGTGACCGGCTCCGTTCAGAGATATCATTATTAGAGGCAAAGTTAGGTCATGGCGATTTTTCTGCTGCTAATACAAAAGTTCTGCGGATGGTGAATACACTTACCGTAGATAATGAAGCCAAACAAACCATAGAAGTGCTGCAAAATGAACTGCAGAAAACAAAAGAGAAATTAAAAGCTGTTGAAGAATTGAAGAGTCAATCAGGAGAAACTGGAAAGCTGGTGGAGAGCTACATATCGGATAAGATATTGCAACTGAAAGAACAAATTGCAACACTAGAGAAGCGAGAAGAGAGATACAAGACCGTGTTTGCAGACAGAATTTCAGTTTTCCGGAGGGCGTGCTGTGAGATTTTTGGTTACAAGATTGTGATGGATGAACACCAGCGATCAAATGGAATCCCAGTGACACGATTTACGCTGCAATCAATTTATGCACAAAGTGATGATGAAAAACTTGAATTTGAATATGAATCAGGGAATACCAACATTTTGGTAAATCATTACACATCTCAGCCTGAGGTATCTCGTCAGGTTGAGATATTCGTTCGGAAAATGAATTCAATTCCTGCTTTTACTGCCAACATAACAGTGGAGTCTTTCAATCGAAGAACCTTATCATAA
Protein sequence

>Msa1413380

MILRTPPPPKRPRSDDGDAQLVIYEDPAAAVEEPSEHMLCTYQCRQMVKSDFLDALSKAENQIRDYQSQFQTLNHNFQKLDTERKKSLEQLLYTEQELAASKGREKALQDQLLKEVTDSQDRLRKYIQLNTELQAKLQNETNLRIQAESHAASAQDKATSLEGKLGHLSETIEREKKRLHHDHSQLKKDSNFSISRITANLEQMECRANNAEREADLLKEQLDHLKDQFKECLHQKTEAEKKLATFSSQEVSSTGSDVLVKQLQQELQHYESEVREARKLRSNHENIELLKEKLLEEKSRRERAQSELSKLQDVQSNMKKLEDQISSWRLMIKDIPGISCFEDMPAKFAALQKEVIYSTQKEGEGTARLKQLEVALDAAEIGKQNAETEAVLYKEKAEVLKSEIKRIELTLAVVTEERNKLRILANLKNGEAGDESSSANPIQELESSLMKKDEYIKELESTLNELRVVNNRQHEEIKILNEKLHNEARRIKSLERESDRLRSEISLLEAKLGHGDFSAANTKVLRMVNTLTVDNEAKQTIEVLQNELQKTKEKLKAVEELKSQSGETGKLVESYISDKILQLKEQIATLEKREERYKTVFADRISVFRRACCEIFGYKIVMDEHQRSNGIPVTRFTLQSIYAQSDDEKLEFEYESGNTNILVNHYTSQPEVSRQVEIFVRKMNSIPAFTANITVESFNRRTLS*