Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542160 | XP_003606813.1 | 98.310 | 355 | 5 | 1 | 1 | 354 | 59 | 413 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542160 | sp|Q8VYD3|U1159_ARATH | 52.542 | 354 | 139 | 4 | 1 | 354 | 52 | 376 | 7.08e-116 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542160 | G7JEV2 | 98.310 | 355 | 5 | 1 | 1 | 354 | 59 | 413 | 0.0 | 704 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0542160 | -0.853587 | 2.165063e-61 | -8.615850e-47 |
| Msa0004060 | Msa0542160 | 0.829545 | 4.847630e-55 | -8.615850e-47 |
| Msa0006290 | Msa0542160 | 0.820103 | 8.183991e-53 | -8.615850e-47 |
| Msa0006880 | Msa0542160 | 0.808775 | 2.623985e-50 | -8.615850e-47 |
| Msa0027390 | Msa0542160 | 0.800662 | 1.297391e-48 | -8.615850e-47 |
| Msa0027580 | Msa0542160 | 0.823941 | 1.056280e-53 | -8.615850e-47 |
| Msa0029540 | Msa0542160 | -0.802054 | 6.730881e-49 | -8.615850e-47 |
| Msa0030380 | Msa0542160 | 0.806075 | 9.807798e-50 | -8.615850e-47 |
| Msa0032370 | Msa0542160 | 0.814864 | 1.239979e-51 | -8.615850e-47 |
| Msa0041620 | Msa0542160 | 0.809141 | 2.190522e-50 | -8.615850e-47 |
| Msa0043170 | Msa0542160 | 0.803658 | 3.138372e-49 | -8.615850e-47 |
| Msa0046760 | Msa0542160 | 0.802908 | 4.488251e-49 | -8.615850e-47 |
| Msa0047280 | Msa0542160 | 0.814857 | 1.244026e-51 | -8.615850e-47 |
| Msa0049400 | Msa0542160 | -0.803549 | 3.306608e-49 | -8.615850e-47 |
| Msa0053570 | Msa0542160 | 0.801018 | 1.097225e-48 | -8.615850e-47 |
| Msa0054930 | Msa0542160 | 0.821295 | 4.357065e-53 | -8.615850e-47 |
| Msa0055150 | Msa0542160 | 0.817800 | 2.733298e-52 | -8.615850e-47 |
| Msa0057140 | Msa0542160 | 0.834144 | 3.552785e-56 | -8.615850e-47 |
| Msa0057710 | Msa0542160 | 0.800749 | 1.245638e-48 | -8.615850e-47 |
| Msa0068760 | Msa0542160 | 0.827650 | 1.391740e-54 | -8.615850e-47 |
| Msa0069260 | Msa0542160 | 0.813672 | 2.273221e-51 | -8.615850e-47 |
| Msa0069280 | Msa0542160 | 0.803411 | 3.530530e-49 | -8.615850e-47 |
| Msa0069310 | Msa0542160 | 0.825486 | 4.566869e-54 | -8.615850e-47 |
| Msa0075340 | Msa0542160 | 0.823045 | 1.710805e-53 | -8.615850e-47 |
| Msa0076000 | Msa0542160 | 0.828081 | 1.096190e-54 | -8.615850e-47 |
| Msa0077880 | Msa0542160 | 0.806367 | 8.512848e-50 | -8.615850e-47 |
| Msa0081230 | Msa0542160 | 0.802227 | 6.198974e-49 | -8.615850e-47 |
| Msa0085360 | Msa0542160 | -0.800618 | 1.324528e-48 | -8.615850e-47 |
| Msa0090030 | Msa0542160 | 0.814094 | 1.835062e-51 | -8.615850e-47 |
| Msa0094920 | Msa0542160 | 0.809846 | 1.546281e-50 | -8.615850e-47 |
| Msa0095380 | Msa0542160 | 0.808328 | 3.268618e-50 | -8.615850e-47 |
| Msa0097850 | Msa0542160 | 0.802508 | 5.425871e-49 | -8.615850e-47 |
| Msa0099190 | Msa0542160 | 0.810846 | 9.408113e-51 | -8.615850e-47 |
| Msa0099510 | Msa0542160 | 0.831637 | 1.490926e-55 | -8.615850e-47 |
| Msa0100300 | Msa0542160 | 0.820685 | 6.020244e-53 | -8.615850e-47 |
| Msa0100800 | Msa0542160 | 0.818636 | 1.767708e-52 | -8.615850e-47 |
| Msa0104610 | Msa0542160 | 0.800579 | 1.349031e-48 | -8.615850e-47 |
| Msa0124340 | Msa0542160 | 0.809028 | 2.316559e-50 | -8.615850e-47 |
| Msa0135420 | Msa0542160 | 0.819671 | 1.027399e-52 | -8.615850e-47 |
| Msa0136380 | Msa0542160 | 0.806153 | 9.444489e-50 | -8.615850e-47 |
| Msa0137040 | Msa0542160 | 0.803481 | 3.415713e-49 | -8.615850e-47 |
| Msa0138970 | Msa0542160 | -0.819551 | 1.094230e-52 | -8.615850e-47 |
| Msa0139990 | Msa0542160 | 0.811303 | 7.488409e-51 | -8.615850e-47 |
| Msa0145070 | Msa0542160 | 0.801585 | 8.399826e-49 | -8.615850e-47 |
| Msa0145950 | Msa0542160 | 0.840302 | 9.434798e-58 | -8.615850e-47 |
| Msa0148120 | Msa0542160 | 0.833831 | 4.254530e-56 | -8.615850e-47 |
| Msa0156650 | Msa0542160 | -0.807638 | 4.583610e-50 | -8.615850e-47 |
| Msa0165300 | Msa0542160 | 0.811792 | 5.864324e-51 | -8.615850e-47 |
| Msa0168100 | Msa0542160 | 0.808676 | 2.755155e-50 | -8.615850e-47 |
| Msa0168640 | Msa0542160 | -0.802238 | 6.169445e-49 | -8.615850e-47 |
| Msa0172350 | Msa0542160 | 0.849496 | 3.114487e-60 | -8.615850e-47 |
| Msa0173740 | Msa0542160 | 0.807978 | 3.881749e-50 | -8.615850e-47 |
| Msa0173820 | Msa0542160 | 0.808966 | 2.388032e-50 | -8.615850e-47 |
| Msa0177700 | Msa0542160 | -0.801396 | 9.183053e-49 | -8.615850e-47 |
| Msa0181520 | Msa0542160 | 0.803496 | 3.391160e-49 | -8.615850e-47 |
| Msa0185270 | Msa0542160 | 0.813650 | 2.299191e-51 | -8.615850e-47 |
| Msa0185590 | Msa0542160 | 0.856711 | 2.675170e-62 | -8.615850e-47 |
| Msa0186890 | Msa0542160 | 0.816314 | 5.895420e-52 | -8.615850e-47 |
| Msa0187070 | Msa0542160 | 0.804608 | 1.991020e-49 | -8.615850e-47 |
| Msa0196020 | Msa0542160 | -0.820364 | 7.133227e-53 | -8.615850e-47 |
| Msa0205850 | Msa0542160 | 0.807210 | 5.649642e-50 | -8.615850e-47 |
| Msa0208810 | Msa0542160 | 0.845886 | 3.070694e-59 | -8.615850e-47 |
| Msa0219250 | Msa0542160 | -0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0222920 | Msa0542160 | 0.828660 | 7.946354e-55 | -8.615850e-47 |
| Msa0223290 | Msa0542160 | 0.817027 | 4.078869e-52 | -8.615850e-47 |
| Msa0226470 | Msa0542160 | 0.825156 | 5.465120e-54 | -8.615850e-47 |
| Msa0227400 | Msa0542160 | 0.855479 | 6.136475e-62 | -8.615850e-47 |
| Msa0231880 | Msa0542160 | 0.807570 | 4.738574e-50 | -8.615850e-47 |
| Msa0374250 | Msa0542160 | 0.803482 | 3.414077e-49 | -8.615850e-47 |
| Msa0377530 | Msa0542160 | 0.860770 | 1.638369e-63 | -8.615850e-47 |
| Msa0380040 | Msa0542160 | 0.805118 | 1.557673e-49 | -8.615850e-47 |
| Msa0392940 | Msa0542160 | 0.828972 | 6.677131e-55 | -8.615850e-47 |
| Msa0393680 | Msa0542160 | 0.831557 | 1.560137e-55 | -8.615850e-47 |
| Msa0393950 | Msa0542160 | 0.836796 | 7.583944e-57 | -8.615850e-47 |
| Msa0394400 | Msa0542160 | 0.815436 | 9.252299e-52 | -8.615850e-47 |
| Msa0402330 | Msa0542160 | 0.832703 | 8.126563e-56 | -8.615850e-47 |
| Msa0413450 | Msa0542160 | 0.831290 | 1.815689e-55 | -8.615850e-47 |
| Msa0414950 | Msa0542160 | -0.823067 | 1.691247e-53 | -8.615850e-47 |
| Msa0415810 | Msa0542160 | 0.853378 | 2.486876e-61 | -8.615850e-47 |
| Msa0416400 | Msa0542160 | 0.801673 | 8.057274e-49 | -8.615850e-47 |
| Msa0419520 | Msa0542160 | 0.818753 | 1.662849e-52 | -8.615850e-47 |
| Msa0420000 | Msa0542160 | 0.805111 | 1.563249e-49 | -8.615850e-47 |
| Msa0421780 | Msa0542160 | -0.802855 | 4.602614e-49 | -8.615850e-47 |
| Msa0423040 | Msa0542160 | 0.808011 | 3.819024e-50 | -8.615850e-47 |
| Msa0423360 | Msa0542160 | -0.818041 | 2.410262e-52 | -8.615850e-47 |
| Msa0426810 | Msa0542160 | 0.823883 | 1.089843e-53 | -8.615850e-47 |
| Msa0427200 | Msa0542160 | 0.822311 | 2.535866e-53 | -8.615850e-47 |
| Msa0428240 | Msa0542160 | 0.810003 | 1.430386e-50 | -8.615850e-47 |
| Msa0429290 | Msa0542160 | 0.800458 | 1.427788e-48 | -8.615850e-47 |
| Msa0432770 | Msa0542160 | 0.806570 | 7.715403e-50 | -8.615850e-47 |
| Msa0436280 | Msa0542160 | -0.813973 | 1.951296e-51 | -8.615850e-47 |
| Msa0437510 | Msa0542160 | 0.825641 | 4.195051e-54 | -8.615850e-47 |
| Msa0460930 | Msa0542160 | 0.861130 | 1.273720e-63 | -8.615850e-47 |
| Msa0462220 | Msa0542160 | 0.807661 | 4.532797e-50 | -8.615850e-47 |
| Msa0462990 | Msa0542160 | 0.808142 | 3.581607e-50 | -8.615850e-47 |
| Msa0463500 | Msa0542160 | 0.804930 | 1.704975e-49 | -8.615850e-47 |
| Msa0464900 | Msa0542160 | 0.811604 | 6.442271e-51 | -8.615850e-47 |
| Msa0465920 | Msa0542160 | 0.802289 | 6.022056e-49 | -8.615850e-47 |
| Msa0469790 | Msa0542160 | 0.826072 | 3.315720e-54 | -8.615850e-47 |
| Msa0469910 | Msa0542160 | -0.843315 | 1.511211e-58 | -8.615850e-47 |
| Msa0473240 | Msa0542160 | 0.824935 | 6.163690e-54 | -8.615850e-47 |
| Msa0474590 | Msa0542160 | 0.819990 | 8.685779e-53 | -8.615850e-47 |
| Msa0480000 | Msa0542160 | 0.804196 | 2.426263e-49 | -8.615850e-47 |
| Msa0480320 | Msa0542160 | 0.810975 | 8.824170e-51 | -8.615850e-47 |
| Msa0239940 | Msa0542160 | 0.831855 | 1.317359e-55 | -8.615850e-47 |
| Msa0242680 | Msa0542160 | 0.837257 | 5.783259e-57 | -8.615850e-47 |
| Msa0245850 | Msa0542160 | 0.828530 | 8.543638e-55 | -8.615850e-47 |
| Msa0251250 | Msa0542160 | 0.818097 | 2.341362e-52 | -8.615850e-47 |
| Msa0259560 | Msa0542160 | 0.819677 | 1.024142e-52 | -8.615850e-47 |
| Msa0260210 | Msa0542160 | 0.800534 | 1.378049e-48 | -8.615850e-47 |
| Msa0267760 | Msa0542160 | 0.843384 | 1.448234e-58 | -8.615850e-47 |
| Msa0267870 | Msa0542160 | 0.819347 | 1.217961e-52 | -8.615850e-47 |
| Msa0275400 | Msa0542160 | -0.847575 | 1.060685e-59 | -8.615850e-47 |
| Msa0288730 | Msa0542160 | 0.842373 | 2.690607e-58 | -8.615850e-47 |
| Msa0291520 | Msa0542160 | 0.825643 | 4.190454e-54 | -8.615850e-47 |
| Msa0296760 | Msa0542160 | 0.802189 | 6.312210e-49 | -8.615850e-47 |
| Msa0302650 | Msa0542160 | 0.823626 | 1.251994e-53 | -8.615850e-47 |
| Msa0302980 | Msa0542160 | 0.801482 | 8.821003e-49 | -8.615850e-47 |
| Msa0304290 | Msa0542160 | 0.817611 | 3.015120e-52 | -8.615850e-47 |
| Msa0304330 | Msa0542160 | 0.820633 | 6.186226e-53 | -8.615850e-47 |
| Msa0305890 | Msa0542160 | 0.816016 | 6.871307e-52 | -8.615850e-47 |
| Msa0308200 | Msa0542160 | 0.802869 | 4.572387e-49 | -8.615850e-47 |
| Msa0308220 | Msa0542160 | 0.832927 | 7.148607e-56 | -8.615850e-47 |
| Msa0310410 | Msa0542160 | 0.804137 | 2.495777e-49 | -8.615850e-47 |
| Msa0311860 | Msa0542160 | 0.818118 | 2.315723e-52 | -8.615850e-47 |
| Msa0315240 | Msa0542160 | 0.813538 | 2.433728e-51 | -8.615850e-47 |
| Msa0320100 | Msa0542160 | 0.811559 | 6.590145e-51 | -8.615850e-47 |
| Msa0334350 | Msa0542160 | 0.800040 | 1.736903e-48 | -8.615850e-47 |
| Msa0337650 | Msa0542160 | 0.807266 | 5.497723e-50 | -8.615850e-47 |
| Msa0340810 | Msa0542160 | 0.812817 | 3.502660e-51 | -8.615850e-47 |
| Msa0344870 | Msa0542160 | 0.805075 | 1.590143e-49 | -8.615850e-47 |
| Msa0347360 | Msa0542160 | 0.810474 | 1.132088e-50 | -8.615850e-47 |
| Msa0355270 | Msa0542160 | 0.834821 | 2.400956e-56 | -8.615850e-47 |
| Msa0505150 | Msa0542160 | 0.816151 | 6.411652e-52 | -8.615850e-47 |
| Msa0506890 | Msa0542160 | 0.840789 | 7.036875e-58 | -8.615850e-47 |
| Msa0506940 | Msa0542160 | 0.864872 | 8.890886e-65 | -8.615850e-47 |
| Msa0508200 | Msa0542160 | 0.805041 | 1.616378e-49 | -8.615850e-47 |
| Msa0511490 | Msa0542160 | 0.804332 | 2.272778e-49 | -8.615850e-47 |
| Msa0513440 | Msa0542160 | 0.825403 | 4.778027e-54 | -8.615850e-47 |
| Msa0515640 | Msa0542160 | 0.803505 | 3.376936e-49 | -8.615850e-47 |
| Msa0517490 | Msa0542160 | 0.862074 | 6.556354e-64 | -8.615850e-47 |
| Msa0519130 | Msa0542160 | 0.806753 | 7.058179e-50 | -8.615850e-47 |
| Msa0521310 | Msa0542160 | 0.801857 | 7.386600e-49 | -8.615850e-47 |
| Msa0521880 | Msa0542160 | 0.824244 | 8.964402e-54 | -8.615850e-47 |
| Msa0525340 | Msa0542160 | 0.814537 | 1.464487e-51 | -8.615850e-47 |
| Msa0526710 | Msa0542160 | 0.839409 | 1.611858e-57 | -8.615850e-47 |
| Msa0526890 | Msa0542160 | 0.855047 | 8.198179e-62 | -8.615850e-47 |
| Msa0535030 | Msa0542160 | 0.822425 | 2.384986e-53 | -8.615850e-47 |
| Msa0535060 | Msa0542160 | 0.825568 | 4.365581e-54 | -8.615850e-47 |
| Msa0536790 | Msa0542160 | 0.826504 | 2.616620e-54 | -8.615850e-47 |
| Msa0541860 | Msa0542160 | 0.816648 | 4.963547e-52 | -8.615850e-47 |
| Msa0542160 | Msa0545060 | 0.860284 | 2.299922e-63 | -8.615850e-47 |
| Msa0542160 | Msa0546360 | 0.808211 | 3.462551e-50 | -8.615850e-47 |
| Msa0542160 | Msa0547400 | 0.829586 | 4.737821e-55 | -8.615850e-47 |
| Msa0542160 | Msa0547700 | 0.800243 | 1.579209e-48 | -8.615850e-47 |
| Msa0542160 | Msa0560470 | 0.805467 | 1.316427e-49 | -8.615850e-47 |
| Msa0542160 | Msa0568820 | 0.809009 | 2.338549e-50 | -8.615850e-47 |
| Msa0542160 | Msa0576980 | 0.818192 | 2.227838e-52 | -8.615850e-47 |
| Msa0542160 | Msa0578090 | 0.815336 | 9.738725e-52 | -8.615850e-47 |
| Msa0542160 | Msa0579290 | 0.809051 | 2.290691e-50 | -8.615850e-47 |
| Msa0542160 | Msa0579390 | 0.801688 | 8.000155e-49 | -8.615850e-47 |
| Msa0542160 | Msa0586850 | 0.825801 | 3.844122e-54 | -8.615850e-47 |
| Msa0542160 | Msa0589390 | 0.803794 | 2.940472e-49 | -8.615850e-47 |
| Msa0542160 | Msa0590680 | 0.813913 | 2.011997e-51 | -8.615850e-47 |
| Msa0542160 | Msa0591770 | 0.825967 | 3.510698e-54 | -8.615850e-47 |
| Msa0542160 | Msa0600600 | 0.845195 | 4.724467e-59 | -8.615850e-47 |
| Msa0542160 | Msa0600610 | 0.806466 | 8.113361e-50 | -8.615850e-47 |
| Msa0542160 | Msa0602120 | 0.810286 | 1.243391e-50 | -8.615850e-47 |
| Msa0542160 | Msa0603670 | 0.807628 | 4.605765e-50 | -8.615850e-47 |
| Msa0542160 | Msa0610500 | 0.817855 | 2.655684e-52 | -8.615850e-47 |
| Msa0542160 | Msa0617580 | 0.804560 | 2.037384e-49 | -8.615850e-47 |
| Msa0542160 | Msa0618010 | 0.800575 | 1.351347e-48 | -8.615850e-47 |
| Msa0542160 | Msa0619070 | 0.825837 | 3.770339e-54 | -8.615850e-47 |
| Msa0542160 | Msa0619180 | 0.811707 | 6.117576e-51 | -8.615850e-47 |
| Msa0542160 | Msa0626680 | 0.815532 | 8.811206e-52 | -8.615850e-47 |
| Msa0542160 | Msa0629650 | 0.810147 | 1.331895e-50 | -8.615850e-47 |
| Msa0542160 | Msa0638070 | 0.807212 | 5.642998e-50 | -8.615850e-47 |
| Msa0542160 | Msa0638280 | 0.834319 | 3.210841e-56 | -8.615850e-47 |
| Msa0542160 | Msa0638320 | 0.838841 | 2.262526e-57 | -8.615850e-47 |
| Msa0542160 | Msa0639120 | 0.805668 | 1.194310e-49 | -8.615850e-47 |
| Msa0542160 | Msa0641140 | 0.853319 | 2.584612e-61 | -8.615850e-47 |
| Msa0542160 | Msa0643250 | 0.809880 | 1.520726e-50 | -8.615850e-47 |
| Msa0542160 | Msa0648520 | 0.801362 | 9.331505e-49 | -8.615850e-47 |
| Msa0542160 | Msa0651150 | 0.836659 | 8.221485e-57 | -8.615850e-47 |
| Msa0542160 | Msa0663900 | 0.802187 | 6.319853e-49 | -8.615850e-47 |
| Msa0542160 | Msa0664760 | 0.827251 | 1.734578e-54 | -8.615850e-47 |
| Msa0542160 | Msa0664960 | 0.800157 | 1.644137e-48 | -8.615850e-47 |
| Msa0542160 | Msa0669850 | 0.848720 | 5.119425e-60 | -8.615850e-47 |
| Msa0542160 | Msa0671600 | 0.832216 | 1.073103e-55 | -8.615850e-47 |
| Msa0542160 | Msa0677270 | 0.844571 | 6.962148e-59 | -8.615850e-47 |
| Msa0542160 | Msa0679680 | 0.834044 | 3.762921e-56 | -8.615850e-47 |
| Msa0542160 | Msa0687630 | 0.802002 | 6.897427e-49 | -8.615850e-47 |
| Msa0542160 | Msa0691050 | 0.802158 | 6.405796e-49 | -8.615850e-47 |
| Msa0542160 | Msa0698060 | 0.813999 | 1.925836e-51 | -8.615850e-47 |
| Msa0542160 | Msa0703230 | 0.819761 | 9.798299e-53 | -8.615850e-47 |
| Msa0542160 | Msa0704800 | 0.817516 | 3.166612e-52 | -8.615850e-47 |
| Msa0542160 | Msa0711070 | 0.802767 | 4.799073e-49 | -8.615850e-47 |
| Msa0542160 | Msa0711490 | 0.833092 | 6.504089e-56 | -8.615850e-47 |
| Msa0542160 | Msa0715110 | 0.814166 | 1.769200e-51 | -8.615850e-47 |
| Msa0542160 | Msa0735310 | 0.824908 | 6.253506e-54 | -8.615850e-47 |
| Msa0542160 | Msa0743260 | 0.814360 | 1.603398e-51 | -8.615850e-47 |
| Msa0542160 | Msa0743680 | 0.850957 | 1.213073e-60 | -8.615850e-47 |
| Msa0542160 | Msa0744040 | 0.806043 | 9.960916e-50 | -8.615850e-47 |
| Msa0542160 | Msa0744090 | 0.801767 | 7.710149e-49 | -8.615850e-47 |
| Msa0542160 | Msa0750920 | 0.827904 | 1.208890e-54 | -8.615850e-47 |
| Msa0542160 | Msa0754720 | -0.848818 | 4.810726e-60 | -8.615850e-47 |
| Msa0542160 | Msa0756630 | -0.829178 | 5.954320e-55 | -8.615850e-47 |
| Msa0542160 | Msa0760380 | 0.820782 | 5.719365e-53 | -8.615850e-47 |
| Msa0542160 | Msa0770200 | 0.801967 | 7.014208e-49 | -8.615850e-47 |
| Msa0542160 | Msa0784380 | 0.801897 | 7.249538e-49 | -8.615850e-47 |
| Msa0542160 | Msa0784620 | 0.852302 | 5.048348e-61 | -8.615850e-47 |
| Msa0542160 | Msa0790390 | -0.804046 | 2.606570e-49 | -8.615850e-47 |
| Msa0542160 | Msa0790850 | 0.808920 | 2.442853e-50 | -8.615850e-47 |
| Msa0542160 | Msa0791820 | 0.823281 | 1.507364e-53 | -8.615850e-47 |
| Msa0542160 | Msa0793390 | 0.802360 | 5.822210e-49 | -8.615850e-47 |
| Msa0542160 | Msa0802410 | 0.800577 | 1.349988e-48 | -8.615850e-47 |
| Msa0542160 | Msa0806920 | 0.812754 | 3.615645e-51 | -8.615850e-47 |
| Msa0542160 | Msa0814250 | 0.830090 | 3.570636e-55 | -8.615850e-47 |
| Msa0542160 | Msa0814320 | 0.825364 | 4.881490e-54 | -8.615850e-47 |
| Msa0542160 | Msa0824730 | 0.833244 | 5.959971e-56 | -8.615850e-47 |
| Msa0542160 | Msa0825280 | 0.805598 | 1.235721e-49 | -8.615850e-47 |
| Msa0542160 | Msa0829620 | 0.811834 | 5.742688e-51 | -8.615850e-47 |
| Msa0542160 | Msa0831580 | 0.817109 | 3.910817e-52 | -8.615850e-47 |
| Msa0542160 | Msa0831870 | 0.808133 | 3.597016e-50 | -8.615850e-47 |
| Msa0542160 | Msa0837650 | 0.805107 | 1.566203e-49 | -8.615850e-47 |
| Msa0542160 | Msa0840260 | 0.803734 | 3.026322e-49 | -8.615850e-47 |
| Msa0542160 | Msa0849200 | 0.803197 | 3.909782e-49 | -8.615850e-47 |
| Msa0542160 | Msa0850710 | 0.800148 | 1.651134e-48 | -8.615850e-47 |
| Msa0542160 | Msa0850960 | 0.833302 | 5.766706e-56 | -8.615850e-47 |
| Msa0542160 | Msa0863370 | 0.803430 | 3.498848e-49 | -8.615850e-47 |
| Msa0542160 | Msa0863800 | 0.834255 | 3.332196e-56 | -8.615850e-47 |
| Msa0542160 | Msa0866120 | 0.808117 | 3.625561e-50 | -8.615850e-47 |
| Msa0542160 | Msa0874500 | 0.820311 | 7.334236e-53 | -8.615850e-47 |
| Msa0542160 | Msa0891040 | 0.800349 | 1.502817e-48 | -8.615850e-47 |
| Msa0542160 | Msa0895310 | 0.803959 | 2.717303e-49 | -8.615850e-47 |
| Msa0542160 | Msa0896290 | 0.801968 | 7.010107e-49 | -8.615850e-47 |
| Msa0542160 | Msa0908170 | 0.811078 | 8.380829e-51 | -8.615850e-47 |
| Msa0542160 | Msa0933440 | 0.832453 | 9.370517e-56 | -8.615850e-47 |
| Msa0542160 | Msa0939790 | 0.808994 | 2.355238e-50 | -8.615850e-47 |
| Msa0542160 | Msa0947530 | -0.825710 | 4.040474e-54 | -8.615850e-47 |
| Msa0542160 | Msa0959010 | 0.811959 | 5.391898e-51 | -8.615850e-47 |
| Msa0542160 | Msa0970420 | 0.814738 | 1.322047e-51 | -8.615850e-47 |
| Msa0542160 | Msa0977310 | 0.807015 | 6.213684e-50 | -8.615850e-47 |
| Msa0542160 | Msa0990590 | 0.802292 | 6.013048e-49 | -8.615850e-47 |
| Msa0542160 | Msa0993530 | 0.816934 | 4.280272e-52 | -8.615850e-47 |
| Msa0542160 | Msa1000940 | 0.804085 | 2.559101e-49 | -8.615850e-47 |
| Msa0542160 | Msa1030930 | 0.817049 | 4.033313e-52 | -8.615850e-47 |
| Msa0542160 | Msa1040120 | 0.814390 | 1.578618e-51 | -8.615850e-47 |
| Msa0542160 | Msa1040890 | 0.850158 | 2.035024e-60 | -8.615850e-47 |
| Msa0542160 | Msa1041520 | 0.844452 | 7.496532e-59 | -8.615850e-47 |
| Msa0542160 | Msa1047720 | 0.800586 | 1.344412e-48 | -8.615850e-47 |
| Msa0542160 | Msa1055410 | 0.801641 | 8.181814e-49 | -8.615850e-47 |
| Msa0542160 | Msa1069660 | -0.817572 | 3.076848e-52 | -8.615850e-47 |
| Msa0542160 | Msa1070050 | 0.808807 | 2.582720e-50 | -8.615850e-47 |
| Msa0542160 | Msa1071530 | 0.806575 | 7.697661e-50 | -8.615850e-47 |
| Msa0542160 | Msa1073400 | 0.805922 | 1.056655e-49 | -8.615850e-47 |
| Msa0542160 | Msa1081560 | 0.848834 | 4.759726e-60 | -8.615850e-47 |
| Msa0542160 | Msa1082700 | 0.839611 | 1.428768e-57 | -8.615850e-47 |
| Msa0542160 | Msa1083210 | 0.870489 | 1.403828e-66 | -8.615850e-47 |
| Msa0542160 | Msa1083880 | 0.801671 | 8.065905e-49 | -8.615850e-47 |
| Msa0542160 | Msa1084470 | 0.806762 | 7.025820e-50 | -8.615850e-47 |
| Msa0542160 | Msa1089840 | 0.830987 | 2.154165e-55 | -8.615850e-47 |
| Msa0542160 | Msa1093330 | 0.824007 | 1.019348e-53 | -8.615850e-47 |
| Msa0542160 | Msa1118940 | 0.828044 | 1.118777e-54 | -8.615850e-47 |
| Msa0542160 | Msa1124310 | 0.808673 | 2.759134e-50 | -8.615850e-47 |
| Msa0542160 | Msa1125470 | 0.802819 | 4.680890e-49 | -8.615850e-47 |
| Msa0542160 | Msa1125550 | 0.814961 | 1.179999e-51 | -8.615850e-47 |
| Msa0542160 | Msa1127130 | 0.847600 | 1.043724e-59 | -8.615850e-47 |
| Msa0542160 | Msa1127830 | 0.876021 | 1.944294e-68 | -8.615850e-47 |
| Msa0542160 | Msa1130210 | -0.832987 | 6.905433e-56 | -8.615850e-47 |
| Msa0542160 | Msa1166410 | 0.846775 | 1.757673e-59 | -8.615850e-47 |
| Msa0542160 | Msa1171870 | 0.802055 | 6.726238e-49 | -8.615850e-47 |
| Msa0542160 | Msa1174100 | 0.830210 | 3.338981e-55 | -8.615850e-47 |
| Msa0542160 | Msa1187840 | 0.807213 | 5.639965e-50 | -8.615850e-47 |
| Msa0542160 | Msa1191910 | 0.802067 | 6.687911e-49 | -8.615850e-47 |
| Msa0542160 | Msa1217860 | 0.843892 | 1.059523e-58 | -8.615850e-47 |
| Msa0542160 | Msa1237030 | 0.807604 | 4.659877e-50 | -8.615850e-47 |
| Msa0542160 | Msa1246530 | -0.807886 | 4.059564e-50 | -8.615850e-47 |
| Msa0542160 | Msa1249920 | 0.816611 | 5.057801e-52 | -8.615850e-47 |
| Msa0542160 | Msa1254710 | 0.812478 | 4.155529e-51 | -8.615850e-47 |
| Msa0542160 | Msa1264020 | 0.810282 | 1.245358e-50 | -8.615850e-47 |
| Msa0542160 | Msa1269300 | 0.827972 | 1.164189e-54 | -8.615850e-47 |
| Msa0542160 | Msa1269580 | -0.824186 | 9.249865e-54 | -8.615850e-47 |
| Msa0542160 | Msa1291350 | 0.814636 | 1.392577e-51 | -8.615850e-47 |
| Msa0542160 | Msa1294840 | 0.819150 | 1.350948e-52 | -8.615850e-47 |
| Msa0542160 | Msa1294960 | 0.818096 | 2.342942e-52 | -8.615850e-47 |
| Msa0542160 | Msa1311960 | 0.824923 | 6.205621e-54 | -8.615850e-47 |
| Msa0542160 | Msa1316780 | 0.800124 | 1.669838e-48 | -8.615850e-47 |
| Msa0542160 | Msa1316830 | 0.823835 | 1.118496e-53 | -8.615850e-47 |
| Msa0542160 | Msa1319650 | 0.807377 | 5.208208e-50 | -8.615850e-47 |
| Msa0542160 | Msa1335940 | 0.800136 | 1.660704e-48 | -8.615850e-47 |
| Msa0542160 | Msa1337730 | 0.805647 | 1.206734e-49 | -8.615850e-47 |
| Msa0542160 | Msa1343070 | 0.805335 | 1.402665e-49 | -8.615850e-47 |
| Msa0542160 | Msa1355700 | 0.817552 | 3.109016e-52 | -8.615850e-47 |
| Msa0542160 | Msa1359390 | 0.835734 | 1.411865e-56 | -8.615850e-47 |
| Msa0542160 | Msa1360890 | -0.836932 | 7.002155e-57 | -8.615850e-47 |
| Msa0542160 | Msa1362510 | 0.835697 | 1.443190e-56 | -8.615850e-47 |
| Msa0542160 | Msa1365150 | 0.818639 | 1.764842e-52 | -8.615850e-47 |
| Msa0542160 | Msa1370620 | 0.836584 | 8.587836e-57 | -8.615850e-47 |
| Msa0542160 | Msa1371430 | 0.810139 | 1.337242e-50 | -8.615850e-47 |
| Msa0542160 | Msa1375680 | 0.805289 | 1.434216e-49 | -8.615850e-47 |
| Msa0542160 | Msa1386230 | 0.829531 | 4.885428e-55 | -8.615850e-47 |
| Msa0542160 | Msa1390230 | 0.860061 | 2.684844e-63 | -8.615850e-47 |
| Msa0542160 | Msa1390310 | 0.842700 | 2.202705e-58 | -8.615850e-47 |
| Msa0542160 | Msa1390770 | 0.814743 | 1.318621e-51 | -8.615850e-47 |
| Msa0542160 | Msa1397050 | 0.808200 | 3.480717e-50 | -8.615850e-47 |
| Msa0542160 | Msa1397810 | 0.800675 | 1.289739e-48 | -8.615850e-47 |
| Msa0542160 | Msa1397940 | 0.808509 | 2.991039e-50 | -8.615850e-47 |
| Msa0542160 | Msa1398860 | 0.804469 | 2.127913e-49 | -8.615850e-47 |
| Msa0542160 | Msa1403580 | -0.811061 | 8.450096e-51 | -8.615850e-47 |
| Msa0542160 | Msa1403930 | -0.823575 | 1.286294e-53 | -8.615850e-47 |
| Msa0542160 | Msa1404190 | 0.800678 | 1.287452e-48 | -8.615850e-47 |
| Msa0542160 | Msa1404540 | 0.804228 | 2.389638e-49 | -8.615850e-47 |
| Msa0542160 | Msa1406040 | 0.800528 | 1.381556e-48 | -8.615850e-47 |
| Msa0542160 | Msa1415640 | 0.809387 | 1.940159e-50 | -8.615850e-47 |
| Msa0542160 | Msa1415940 | 0.818252 | 2.160169e-52 | -8.615850e-47 |
| Msa0542160 | Msa1427060 | 0.810074 | 1.381053e-50 | -8.615850e-47 |
| Msa0542160 | Msa1428370 | 0.822960 | 1.791158e-53 | -8.615850e-47 |
| Msa0542160 | Msa1429360 | -0.808666 | 2.768846e-50 | -8.615850e-47 |
| Msa0542160 | Msa1438640 | 0.821711 | 3.492515e-53 | -8.615850e-47 |
| Msa0542160 | Msa1439960 | 0.855804 | 4.933913e-62 | -8.615850e-47 |
| Msa0542160 | Msa1442220 | -0.847641 | 1.016778e-59 | -8.615850e-47 |
| Msa0542160 | Msa1447110 | 0.830714 | 2.513905e-55 | -8.615850e-47 |
| Msa0542160 | Msa1449910 | 0.823849 | 1.110084e-53 | -8.615850e-47 |
| Msa0542160 | Msa1452470 | 0.815682 | 8.156069e-52 | -8.615850e-47 |
| Msa0542160 | Msa1452480 | 0.828774 | 7.455099e-55 | -8.615850e-47 |
| Msa0542160 | Msa1454110 | 0.808488 | 3.021695e-50 | -8.615850e-47 |
| Msa0542160 | Msa1458410 | 0.802342 | 5.870195e-49 | -8.615850e-47 |
| Msa0542160 | Msa1461490 | 0.802733 | 4.876123e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542160 | MtrunA17_Chr4g0033781 | 98.310 | 355 | 5 | 1 | 1 | 354 | 59 | 413 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0542160 | AT2G46200.1 | 52.542 | 354 | 139 | 4 | 1 | 354 | 52 | 376 | 7.20e-117 | 344 |
| Msa0542160 | AT2G46200.2 | 52.542 | 354 | 139 | 4 | 1 | 354 | 52 | 376 | 7.20e-117 | 344 |
| Msa0542160 | AT2G46200.4 | 49.848 | 329 | 136 | 4 | 1 | 329 | 52 | 351 | 9.37e-98 | 294 |
| Msa0542160 | AT2G46200.3 | 49.527 | 317 | 131 | 4 | 1 | 317 | 52 | 339 | 2.22e-90 | 275 |
Find 102 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTTCTGCATGGCTTTCC+TGG | 0.172055 | 4_1:+26240155 | None:intergenic |
| CTTCAACAGCCATTGCTTCT+TGG | 0.185190 | 4_1:+26242135 | None:intergenic |
| CTCCTCCAGCCAACGAGATA+TGG | 0.241122 | 4_1:-26239446 | Msa0542160:CDS |
| ATAGAACTCAATCGGTAAAT+TGG | 0.263314 | 4_1:+26239969 | None:intergenic |
| TTCAACAGCCATTGCTTCTT+GGG | 0.270473 | 4_1:+26242136 | None:intergenic |
| TTCAGAAATGATAGTGATTT+GGG | 0.271360 | 4_1:-26239019 | Msa0542160:three_prime_UTR |
| ATTCAGAAATGATAGTGATT+TGG | 0.272013 | 4_1:-26239020 | Msa0542160:three_prime_UTR |
| CATCTTCCTCTGGGAGAAAA+TGG | 0.275665 | 4_1:+26240286 | None:intergenic |
| CCTTCCTCCCGGTCGAATAT+AGG | 0.351124 | 4_1:+26239625 | None:intergenic |
| CAATGATGAAAGTCAGATTA+AGG | 0.364871 | 4_1:-26240112 | Msa0542160:CDS |
| TGGAGGAGCTTATGATCCTT+TGG | 0.396538 | 4_1:-26239992 | Msa0542160:CDS |
| AGCTTACACCGGGGTTTGCC+AGG | 0.396702 | 4_1:+26239250 | None:intergenic |
| ATCCCTCTTCGGTTACACTA+TGG | 0.402654 | 4_1:+26240070 | None:intergenic |
| ACAGCTCGAGTTGCTCTTGA+TGG | 0.410405 | 4_1:-26240808 | Msa0542160:intron |
| CGAGATATGGGCATCTTACT+TGG | 0.410996 | 4_1:-26239433 | Msa0542160:CDS |
| GTTAAAACTAAAAGCTCAGC+TGG | 0.412096 | 4_1:-26242096 | Msa0542160:CDS |
| GCATCTGAAGGACAGAACTA+TGG | 0.412575 | 4_1:-26240012 | Msa0542160:CDS |
| CTTGATACTTGCAATTTCCT+TGG | 0.418968 | 4_1:+26241771 | None:intergenic |
| AGGCTGATGAATGGAGGGCT+AGG | 0.421411 | 4_1:-26241801 | Msa0542160:CDS |
| ATCTCGTTGGCTGGAGGAGG+AGG | 0.421763 | 4_1:+26239450 | None:intergenic |
| AGAAGAGGAGCGTGAAGCTT+TGG | 0.426297 | 4_1:-26240229 | Msa0542160:CDS |
| AGATGATCAAAGAGAGTAAA+GGG | 0.442016 | 4_1:-26242241 | Msa0542160:CDS |
| GAAGAAGAAATTAGAGTCTG+AGG | 0.447206 | 4_1:-26241153 | Msa0542160:intron |
| TAGAGTATCTTGCAATTCCC+TGG | 0.448248 | 4_1:+26242505 | None:intergenic |
| GAAATGTCTGTGATCGGTCC+AGG | 0.451951 | 4_1:-26242523 | Msa0542160:five_prime_UTR |
| TTGCAACTGCCGAGGAATCC+AGG | 0.452947 | 4_1:-26240173 | Msa0542160:CDS |
| ACTGCTGATTTCTCTTCCCA+TGG | 0.453492 | 4_1:+26242041 | None:intergenic |
| GAGCCATGAGTTTCTTCTAA+AGG | 0.453971 | 4_1:+26242218 | None:intergenic |
| ATAAAGTGCATAAGTCTAAA+CGG | 0.456650 | 4_1:-26242004 | Msa0542160:CDS |
| GAGTTCTATCATTATTATCA+TGG | 0.459001 | 4_1:-26239955 | Msa0542160:CDS |
| TCCTCCAGCCAACGAGATAT+GGG | 0.464743 | 4_1:-26239445 | Msa0542160:CDS |
| CCCTCCATTCATCAGCCTCT+CGG | 0.473533 | 4_1:+26241806 | None:intergenic |
| GTCAGATTAAGGAGAACAAC+GGG | 0.475520 | 4_1:-26240101 | Msa0542160:CDS |
| ACCAATCTTGCGATCAATGC+TGG | 0.476278 | 4_1:+26239377 | None:intergenic |
| TTAAAGAATTACGCTCCATA+AGG | 0.476317 | 4_1:-26240776 | Msa0542160:CDS |
| GAAGCGTATTGCGGAAATGC+TGG | 0.479183 | 4_1:-26241955 | Msa0542160:CDS |
| AGTTGCATCTAATCCCTCTT+CGG | 0.483018 | 4_1:+26240059 | None:intergenic |
| AAAATTTATCATCTTCCTCT+GGG | 0.483774 | 4_1:+26240277 | None:intergenic |
| CATGGCTTTCCTGGATTCCT+CGG | 0.489725 | 4_1:+26240164 | None:intergenic |
| TTATCATTGTTGAATGTACT+AGG | 0.492392 | 4_1:-26239137 | Msa0542160:three_prime_UTR |
| CAAGGAAATTGCAAGTATCA+AGG | 0.496356 | 4_1:-26241770 | Msa0542160:intron |
| AAGTTTCCCTTGGTTCTGCA+TGG | 0.496492 | 4_1:+26240146 | None:intergenic |
| GATGCCCATATCTCGTTGGC+TGG | 0.497660 | 4_1:+26239441 | None:intergenic |
| CATATCTCGTTGGCTGGAGG+AGG | 0.504973 | 4_1:+26239447 | None:intergenic |
| TAATAATGATAGAACTCAAT+CGG | 0.507283 | 4_1:+26239961 | None:intergenic |
| AAGAGAAATCAGCAGTGGCC+AGG | 0.512018 | 4_1:-26242034 | Msa0542160:CDS |
| TTGACCGAGAGGCTGATGAA+TGG | 0.517727 | 4_1:-26241810 | Msa0542160:CDS |
| ATGCACTTTATTTGTAAACC+TGG | 0.520502 | 4_1:+26242016 | None:intergenic |
| GATACTCTAAATCTTGCAAA+GGG | 0.523005 | 4_1:-26242491 | Msa0542160:five_prime_UTR |
| GGAGGCTGAACCCAGTGTCC+TGG | 0.524624 | 4_1:+26239468 | None:intergenic |
| TTGCGGATGAAGCAAGTCCA+TGG | 0.526086 | 4_1:-26242058 | Msa0542160:CDS |
| TTTATTTAATACCTTCCTCC+CGG | 0.530215 | 4_1:+26239614 | None:intergenic |
| TCAGGCTGCAGTGGAAGAAG+AGG | 0.531380 | 4_1:-26240244 | Msa0542160:CDS |
| TGAGAGAGTTCAGGCTGCAG+TGG | 0.533147 | 4_1:-26240253 | Msa0542160:CDS |
| ATGGGATGCCTATATTCGAC+CGG | 0.536152 | 4_1:-26239633 | Msa0542160:CDS |
| CCTATATTCGACCGGGAGGA+AGG | 0.539475 | 4_1:-26239625 | Msa0542160:intron |
| TGAAGTGTCTAGAGGACAGA+GGG | 0.549595 | 4_1:-26242172 | Msa0542160:CDS |
| ACTTTGTGCAGTCGCATACC+AGG | 0.551095 | 4_1:-26239486 | Msa0542160:intron |
| AAGATGATCAAAGAGAGTAA+AGG | 0.555428 | 4_1:-26242242 | Msa0542160:CDS |
| AGTCTAAACGGAATAAACTC+TGG | 0.556446 | 4_1:-26241992 | Msa0542160:CDS |
| TCATGCAGGTTAGAAGAGGA+TGG | 0.557785 | 4_1:-26239652 | Msa0542160:intron |
| GTTGAATGTACTAGGAGAGA+AGG | 0.561093 | 4_1:-26239129 | Msa0542160:three_prime_UTR |
| CTTGCGATCAATGCTGGTGA+TGG | 0.565078 | 4_1:+26239383 | None:intergenic |
| GGCTGATGAATGGAGGGCTA+GGG | 0.568574 | 4_1:-26241800 | Msa0542160:CDS |
| TCATCCGCAACATATCTGAA+TGG | 0.572382 | 4_1:+26242071 | None:intergenic |
| ACCGAGAGGCTGATGAATGG+AGG | 0.572524 | 4_1:-26241807 | Msa0542160:CDS |
| CAGTCGCATACCAGGACACT+GGG | 0.574072 | 4_1:-26239478 | Msa0542160:CDS |
| TCATGGAAGCAACAATGACA+TGG | 0.575257 | 4_1:-26239938 | Msa0542160:CDS |
| TATAGAAACCCAAGAAGCAA+TGG | 0.579164 | 4_1:-26242144 | Msa0542160:CDS |
| AGATACTCTAAATCTTGCAA+AGG | 0.591220 | 4_1:-26242492 | Msa0542160:five_prime_UTR |
| AGGAAAGCCATGCAGAACCA+AGG | 0.592619 | 4_1:-26240153 | Msa0542160:CDS |
| GTCCATAGTGTAACCGAAGA+GGG | 0.596745 | 4_1:-26240072 | Msa0542160:CDS |
| GCTCGAGTTGCTCTTGATGG+AGG | 0.597688 | 4_1:-26240805 | Msa0542160:CDS |
| CCGAGAGGCTGATGAATGGA+GGG | 0.598428 | 4_1:-26241806 | Msa0542160:CDS |
| CATGCAGGTTAGAAGAGGAT+GGG | 0.601067 | 4_1:-26239651 | Msa0542160:intron |
| GGAAAGCCATGCAGAACCAA+GGG | 0.605910 | 4_1:-26240152 | Msa0542160:CDS |
| ATGAAGTGTCTAGAGGACAG+AGG | 0.609005 | 4_1:-26242173 | Msa0542160:CDS |
| TCTAGTAACATAGCATCTGA+AGG | 0.611727 | 4_1:-26240024 | Msa0542160:CDS |
| GCCCATATCTCGTTGGCTGG+AGG | 0.613148 | 4_1:+26239444 | None:intergenic |
| TGCGGATGAAGCAAGTCCAT+GGG | 0.617590 | 4_1:-26242057 | Msa0542160:CDS |
| AATCTCATGCAGGTTAGAAG+AGG | 0.619327 | 4_1:-26239656 | Msa0542160:intron |
| AGATGCAATTGCAACTGCCG+AGG | 0.619618 | 4_1:-26240181 | Msa0542160:CDS |
| GCAGTCGCATACCAGGACAC+TGG | 0.624972 | 4_1:-26239479 | Msa0542160:intron |
| GTAAGATGCCCATATCTCGT+TGG | 0.625297 | 4_1:+26239437 | None:intergenic |
| AAATGTCTGTGATCGGTCCA+GGG | 0.626046 | 4_1:-26242522 | Msa0542160:five_prime_UTR |
| GGAGCCATTCAGATATGTTG+CGG | 0.629602 | 4_1:-26242075 | Msa0542160:CDS |
| GGGCCTTTAGAAGAAACTCA+TGG | 0.633643 | 4_1:-26242221 | Msa0542160:CDS |
| TATTGCGGAAATGCTGGCAA+AGG | 0.633876 | 4_1:-26241949 | Msa0542160:intron |
| TATGGGCATCTTACTTGGTG+AGG | 0.633963 | 4_1:-26239428 | Msa0542160:CDS |
| AGTCCATAGTGTAACCGAAG+AGG | 0.638150 | 4_1:-26240073 | Msa0542160:CDS |
| CTAAACGGAATAAACTCTGG+AGG | 0.641658 | 4_1:-26241989 | Msa0542160:CDS |
| TGGGATGCCTATATTCGACC+GGG | 0.643337 | 4_1:-26239632 | Msa0542160:CDS |
| TCAATCGGTAAATTGGCCAA+AGG | 0.652661 | 4_1:+26239976 | None:intergenic |
| GAGGGCTAGGGAGATTGCCA+AGG | 0.655856 | 4_1:-26241788 | Msa0542160:CDS |
| TCTGAAGGACAGAACTATGG+AGG | 0.667704 | 4_1:-26240009 | Msa0542160:CDS |
| AGTCAGATTAAGGAGAACAA+CGG | 0.668743 | 4_1:-26240102 | Msa0542160:CDS |
| CATGGAAGCAACAATGACAT+GGG | 0.669121 | 4_1:-26239937 | Msa0542160:CDS |
| TGACATGGGCACATTGATCG+AGG | 0.675577 | 4_1:-26239923 | Msa0542160:intron |
| ATTTGATCAAATTGACCGAG+AGG | 0.685541 | 4_1:-26241821 | Msa0542160:CDS |
| ATGGGAAGAGAAATCAGCAG+TGG | 0.688987 | 4_1:-26242039 | Msa0542160:CDS |
| GATGCCTATATTCGACCGGG+AGG | 0.757591 | 4_1:-26239629 | Msa0542160:CDS |
| GAAGTGTCTAGAGGACAGAG+GGG | 0.760985 | 4_1:-26242171 | Msa0542160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATAAACAAAATAG+AGG | + | chr4_1:26240493-26240512 | None:intergenic | 10.0% |
| !!! | GTTTGAAATAATTAAGAAAA+TGG | + | chr4_1:26240204-26240223 | None:intergenic | 15.0% |
| !!! | TCTTAATTATTTCAAACTTT+TGG | - | chr4_1:26240207-26240226 | Msa0542160:CDS | 15.0% |
| !!! | GATAATACTAAATTTTGTAA+AGG | + | chr4_1:26241113-26241132 | None:intergenic | 15.0% |
| !!! | ACCATAAATTTTTAATTTGA+TGG | - | chr4_1:26241141-26241160 | Msa0542160:intron | 15.0% |
| !! | ACCATCAAATTAAAAATTTA+TGG | + | chr4_1:26241145-26241164 | None:intergenic | 15.0% |
| !! | AATAACAACAATAATAAAAG+TGG | + | chr4_1:26241810-26241829 | None:intergenic | 15.0% |
| !!! | GTTGATTTGTTAAAAAATCT+AGG | - | chr4_1:26239693-26239712 | Msa0542160:intron | 20.0% |
| !! | ATATTATTCCTGATAAAAAG+TGG | - | chr4_1:26240103-26240122 | Msa0542160:CDS | 20.0% |
| !!! | GGTAAATCATTTCTATTTTA+TGG | - | chr4_1:26240563-26240582 | Msa0542160:intron | 20.0% |
| !! | ATACAAAAGTTGAAAAAACA+AGG | - | chr4_1:26240794-26240813 | Msa0542160:CDS | 20.0% |
| !!! | TCAATTTTTATTGTTTTGCT+TGG | - | chr4_1:26240883-26240902 | Msa0542160:intron | 20.0% |
| !! | TTAAGGTAACAAACTATTAT+AGG | + | chr4_1:26240953-26240972 | None:intergenic | 20.0% |
| !! | TAATAATGATAGAACTCAAT+CGG | + | chr4_1:26241589-26241608 | None:intergenic | 20.0% |
| !!! | TGAATTCTAAAGAAACAAAA+AGG | + | chr4_1:26241705-26241724 | None:intergenic | 20.0% |
| !!! | TGTTTCTTTAGAATTCATAT+TGG | - | chr4_1:26241708-26241727 | Msa0542160:intron | 20.0% |
| !! | CATATTAGATGATATATTCA+AGG | + | chr4_1:26242255-26242274 | None:intergenic | 20.0% |
| !!! | TATCATCTAATATGTTTTGA+AGG | - | chr4_1:26242261-26242280 | Msa0542160:CDS | 20.0% |
| !!! | TGCTAATCATCATTTTTTTT+AGG | - | chr4_1:26242380-26242399 | Msa0542160:intron | 20.0% |
| !!! | TAGTTTGATGTACTTTTTGT+AGG | - | chr4_1:26239261-26239280 | Msa0542160:three_prime_UTR | 25.0% |
| ! | ATAAAGTGCATAAGTCTAAA+CGG | - | chr4_1:26239543-26239562 | Msa0542160:intron | 25.0% |
| ! | ATATCAGTCACTATAAATGT+AGG | + | chr4_1:26239825-26239844 | None:intergenic | 25.0% |
| !!! | TTGATAATTGTTTTTGCCAA+AGG | - | chr4_1:26239844-26239863 | Msa0542160:intron | 25.0% |
| ! | GAATTTGTAAACTTATTCGT+TGG | + | chr4_1:26239910-26239929 | None:intergenic | 25.0% |
| ! | TTAGTCAATTATGCTAAACT+TGG | - | chr4_1:26239991-26240010 | Msa0542160:CDS | 25.0% |
| ! | TGGCAAATGTTAATAATTAG+TGG | + | chr4_1:26240068-26240087 | None:intergenic | 25.0% |
| !!! | AATATGCGCATTTTTTTGAA+TGG | + | chr4_1:26240088-26240107 | None:intergenic | 25.0% |
| ! | AATTTGTAGAGATGATTAGT+TGG | + | chr4_1:26240161-26240180 | None:intergenic | 25.0% |
| !! | TGTATTGCAAACTGATTTAA+CGG | + | chr4_1:26240295-26240314 | None:intergenic | 25.0% |
| ! | TATTGAAAAAAAAGAGTCAG+AGG | - | chr4_1:26240520-26240539 | Msa0542160:intron | 25.0% |
| !! | GTAAATTTTTGTACAAGTGA+TGG | - | chr4_1:26240542-26240561 | Msa0542160:intron | 25.0% |
| ! | AATGTATAGCTATATCCATA+TGG | + | chr4_1:26240635-26240654 | None:intergenic | 25.0% |
| !! | TTTCAACTTTTGTATCCTTA+TGG | + | chr4_1:26240789-26240808 | None:intergenic | 25.0% |
| ! | ATAATCAAAATGCCAAACAT+TGG | + | chr4_1:26241048-26241067 | None:intergenic | 25.0% |
| ! | TATGTAAGTTTCATATATGC+AGG | - | chr4_1:26241238-26241257 | Msa0542160:intron | 25.0% |
| ! | AAAATTTATCATCTTCCTCT+GGG | + | chr4_1:26241273-26241292 | None:intergenic | 25.0% |
| ! | AAAAATTTATCATCTTCCTC+TGG | + | chr4_1:26241274-26241293 | None:intergenic | 25.0% |
| !!! | TAAATTTTTTGAGAGAGTTC+AGG | - | chr4_1:26241285-26241304 | Msa0542160:intron | 25.0% |
| ! | GAGTTCTATCATTATTATCA+TGG | - | chr4_1:26241592-26241611 | Msa0542160:intron | 25.0% |
| !!! | TTCTTTAGAATTCATATTGG+TGG | - | chr4_1:26241711-26241730 | Msa0542160:intron | 25.0% |
| !!! | ATATGTTTTGAAGGTTTGAA+TGG | - | chr4_1:26242270-26242289 | Msa0542160:intron | 25.0% |
| ! | AAAAAAATGATGATTAGCAC+TGG | + | chr4_1:26242379-26242398 | None:intergenic | 25.0% |
| ! | TTATCATTGTTGAATGTACT+AGG | - | chr4_1:26242410-26242429 | Msa0542160:intron | 25.0% |
| !! | ATTCAGAAATGATAGTGATT+TGG | - | chr4_1:26242527-26242546 | Msa0542160:five_prime_UTR | 25.0% |
| AGATACTCTAAATCTTGCAA+AGG | - | chr4_1:26239055-26239074 | Msa0542160:three_prime_UTR | 30.0% | |
| GATACTCTAAATCTTGCAAA+GGG | - | chr4_1:26239056-26239075 | Msa0542160:three_prime_UTR | 30.0% | |
| ! | TTTTCAGCTTAAATCTCTCT+CGG | - | chr4_1:26239152-26239171 | Msa0542160:three_prime_UTR | 30.0% |
| AACACAATGAGTGTTTATAC+TGG | + | chr4_1:26239217-26239236 | None:intergenic | 30.0% | |
| GTATAAACACTCATTGTGTT+TGG | - | chr4_1:26239217-26239236 | Msa0542160:three_prime_UTR | 30.0% | |
| !! | ATGTACTTTTTGTAGGCAAA+AGG | - | chr4_1:26239268-26239287 | Msa0542160:three_prime_UTR | 30.0% |
| AAGATGATCAAAGAGAGTAA+AGG | - | chr4_1:26239305-26239324 | Msa0542160:intron | 30.0% | |
| AGATGATCAAAGAGAGTAAA+GGG | - | chr4_1:26239306-26239325 | Msa0542160:intron | 30.0% | |
| !! | AAGTTTTATGAAGTGTCTAG+AGG | - | chr4_1:26239367-26239386 | Msa0542160:intron | 30.0% |
| ! | ATGCACTTTATTTGTAAACC+TGG | + | chr4_1:26239534-26239553 | None:intergenic | 30.0% |
| AGACAATAGCTACAATAAAG+AGG | + | chr4_1:26239652-26239671 | None:intergenic | 30.0% | |
| !!! | CTCTGACATTTTTCAAGATT+TGG | - | chr4_1:26239947-26239966 | Msa0542160:CDS | 30.0% |
| GCATAATTGACTAATCAATC+AGG | + | chr4_1:26239985-26240004 | None:intergenic | 30.0% | |
| AATTATGCTAAACTTGGAGT+TGG | - | chr4_1:26239997-26240016 | Msa0542160:CDS | 30.0% | |
| !!! | ATTTCCTTTTGTTTTGCCTT+TGG | - | chr4_1:26240424-26240443 | Msa0542160:intron | 30.0% |
| !!! | TTTCCTTTTGTTTTGCCTTT+GGG | - | chr4_1:26240425-26240444 | Msa0542160:intron | 30.0% |
| ATTCTGTTCTATCTACCATA+TGG | - | chr4_1:26240617-26240636 | Msa0542160:intron | 30.0% | |
| TTAAAGAATTACGCTCCATA+AGG | - | chr4_1:26240771-26240790 | Msa0542160:CDS | 30.0% | |
| AAAGATAAATGTGGCAACAA+GGG | + | chr4_1:26240923-26240942 | None:intergenic | 30.0% | |
| AAAAGATAAATGTGGCAACA+AGG | + | chr4_1:26240924-26240943 | None:intergenic | 30.0% | |
| ! | GGAAGTACAAAAGATAAATG+TGG | + | chr4_1:26240932-26240951 | None:intergenic | 30.0% |
| GAATCGGAACTATGAATTTA+AGG | + | chr4_1:26240970-26240989 | None:intergenic | 30.0% | |
| CATAAATCTGCATTCAGAAT+CGG | + | chr4_1:26240986-26241005 | None:intergenic | 30.0% | |
| !! | TTTCTTTTGAAAGTTTCCCT+TGG | + | chr4_1:26241414-26241433 | None:intergenic | 30.0% |
| CAATGATGAAAGTCAGATTA+AGG | - | chr4_1:26241435-26241454 | Msa0542160:intron | 30.0% | |
| ATAGAACTCAATCGGTAAAT+TGG | + | chr4_1:26241581-26241600 | None:intergenic | 30.0% | |
| TTTATTTAATACCTTCCTCC+CGG | + | chr4_1:26241936-26241955 | None:intergenic | 30.0% | |
| AAAATGAAACTTCTTACGCT+AGG | - | chr4_1:26241957-26241976 | Msa0542160:CDS | 30.0% | |
| TATAGAAACCCAAGAAGCAA+TGG | - | chr4_1:26239403-26239422 | Msa0542160:exon | 35.0% | |
| GTTAAAACTAAAAGCTCAGC+TGG | - | chr4_1:26239451-26239470 | Msa0542160:CDS | 35.0% | |
| AGTCTAAACGGAATAAACTC+TGG | - | chr4_1:26239555-26239574 | Msa0542160:intron | 35.0% | |
| ! | AACTCTGGAGGAAGAAAAAA+AGG | - | chr4_1:26239570-26239589 | Msa0542160:intron | 35.0% |
| ! | GAAAAAAAGGAAGCGTATTG+CGG | - | chr4_1:26239583-26239602 | Msa0542160:intron | 35.0% |
| ATTTGATCAAATTGACCGAG+AGG | - | chr4_1:26239726-26239745 | Msa0542160:intron | 35.0% | |
| CTTGATACTTGCAATTTCCT+TGG | + | chr4_1:26239779-26239798 | None:intergenic | 35.0% | |
| CAAGGAAATTGCAAGTATCA+AGG | - | chr4_1:26239777-26239796 | Msa0542160:intron | 35.0% | |
| ATAACCTTTCAGATAGCCTT+TGG | + | chr4_1:26239863-26239882 | None:intergenic | 35.0% | |
| !!! | TAGTTTTTTCTCCTTCGTCT+GGG | + | chr4_1:26240039-26240058 | None:intergenic | 35.0% |
| !!! | TTAGTTTTTTCTCCTTCGTC+TGG | + | chr4_1:26240040-26240059 | None:intergenic | 35.0% |
| !!! | AACTAGCTCCACTTTTTATC+AGG | + | chr4_1:26240114-26240133 | None:intergenic | 35.0% |
| AAAAAGTGGAGCTAGTTGAA+AGG | - | chr4_1:26240117-26240136 | Msa0542160:CDS | 35.0% | |
| TCTTTACTGTTCACTTGTTC+AGG | - | chr4_1:26240239-26240258 | Msa0542160:CDS | 35.0% | |
| ! | TCTGAAACATGTCTATATGC+AGG | - | chr4_1:26240328-26240347 | Msa0542160:intron | 35.0% |
| GAAGAAGAAATTAGAGTCTG+AGG | - | chr4_1:26240394-26240413 | Msa0542160:intron | 35.0% | |
| !!! | TTCCTTTTGTTTTGCCTTTG+GGG | - | chr4_1:26240426-26240445 | Msa0542160:intron | 35.0% |
| ATCAAGTTCTTCAGAGTTCA+CGG | + | chr4_1:26240592-26240611 | None:intergenic | 35.0% | |
| CGATTCTGAATGCAGATTTA+TGG | - | chr4_1:26240984-26241003 | Msa0542160:intron | 35.0% | |
| ! | TGAGTTCAAGTTCCAATGTT+TGG | - | chr4_1:26241033-26241052 | Msa0542160:intron | 35.0% |
| AGTCAGATTAAGGAGAACAA+CGG | - | chr4_1:26241445-26241464 | Msa0542160:intron | 35.0% | |
| TCTAGTAACATAGCATCTGA+AGG | - | chr4_1:26241523-26241542 | Msa0542160:intron | 35.0% | |
| GATTATTCGGCAGTCAATAA+TGG | + | chr4_1:26241875-26241894 | None:intergenic | 35.0% | |
| CTAACCTGCATGAGATTATT+CGG | + | chr4_1:26241888-26241907 | None:intergenic | 35.0% | |
| ! | CACTGGAATTTTACACAGAA+TGG | + | chr4_1:26242362-26242381 | None:intergenic | 35.0% |
| ! | TAGAGTATCTTGCAATTCCC+TGG | + | chr4_1:26239045-26239064 | None:intergenic | 40.0% |
| ! | GCTGAAAAGCAACTTTTACG+TGG | + | chr4_1:26239140-26239159 | None:intergenic | 40.0% |
| GAGCCATGAGTTTCTTCTAA+AGG | + | chr4_1:26239332-26239351 | None:intergenic | 40.0% | |
| TTCAACAGCCATTGCTTCTT+GGG | + | chr4_1:26239414-26239433 | None:intergenic | 40.0% | |
| TCATCCGCAACATATCTGAA+TGG | + | chr4_1:26239479-26239498 | None:intergenic | 40.0% | |
| CTAAACGGAATAAACTCTGG+AGG | - | chr4_1:26239558-26239577 | Msa0542160:intron | 40.0% | |
| ! | TGGCAAAGGTTACTTTGCTT+TGG | - | chr4_1:26239612-26239631 | Msa0542160:intron | 40.0% |
| ! | GGCAAAGGTTACTTTGCTTT+GGG | - | chr4_1:26239613-26239632 | Msa0542160:intron | 40.0% |
| TTTGCCAAAGGCTATCTGAA+AGG | - | chr4_1:26239856-26239875 | Msa0542160:intron | 40.0% | |
| TATGCTAAACTTGGAGTTGG+AGG | - | chr4_1:26240000-26240019 | Msa0542160:CDS | 40.0% | |
| AACCCCAAAGGCAAAACAAA+AGG | + | chr4_1:26240431-26240450 | None:intergenic | 40.0% | |
| GTCAGATTAAGGAGAACAAC+GGG | - | chr4_1:26241446-26241465 | Msa0542160:intron | 40.0% | |
| AGTTGCATCTAATCCCTCTT+CGG | + | chr4_1:26241491-26241510 | None:intergenic | 40.0% | |
| TCAATCGGTAAATTGGCCAA+AGG | + | chr4_1:26241574-26241593 | None:intergenic | 40.0% | |
| TCATGGAAGCAACAATGACA+TGG | - | chr4_1:26241609-26241628 | Msa0542160:intron | 40.0% | |
| CATGGAAGCAACAATGACAT+GGG | - | chr4_1:26241610-26241629 | Msa0542160:intron | 40.0% | |
| AATCTCATGCAGGTTAGAAG+AGG | - | chr4_1:26241891-26241910 | Msa0542160:intron | 40.0% | |
| GCACAAAGTTACAAGGAACA+GGG | + | chr4_1:26242050-26242069 | None:intergenic | 40.0% | |
| TGCACAAAGTTACAAGGAAC+AGG | + | chr4_1:26242051-26242070 | None:intergenic | 40.0% | |
| ATTGATCGCAAGATTGGTGA+TGG | - | chr4_1:26242175-26242194 | Msa0542160:CDS | 40.0% | |
| ! | GAAGGTTTGAATGGTTTTCC+TGG | - | chr4_1:26242279-26242298 | Msa0542160:intron | 40.0% |
| GTTGAATGTACTAGGAGAGA+AGG | - | chr4_1:26242418-26242437 | Msa0542160:intron | 40.0% | |
| AAATGTCTGTGATCGGTCCA+GGG | - | chr4_1:26239025-26239044 | Msa0542160:three_prime_UTR | 45.0% | |
| ! | GGGCCTTTAGAAGAAACTCA+TGG | - | chr4_1:26239326-26239345 | Msa0542160:intron | 45.0% |
| ! | ATGAAGTGTCTAGAGGACAG+AGG | - | chr4_1:26239374-26239393 | Msa0542160:intron | 45.0% |
| ! | TGAAGTGTCTAGAGGACAGA+GGG | - | chr4_1:26239375-26239394 | Msa0542160:intron | 45.0% |
| CTTCAACAGCCATTGCTTCT+TGG | + | chr4_1:26239415-26239434 | None:intergenic | 45.0% | |
| GGAGCCATTCAGATATGTTG+CGG | - | chr4_1:26239472-26239491 | Msa0542160:CDS | 45.0% | |
| !! | ACTGCTGATTTCTCTTCCCA+TGG | + | chr4_1:26239509-26239528 | None:intergenic | 45.0% |
| ATGGGAAGAGAAATCAGCAG+TGG | - | chr4_1:26239508-26239527 | Msa0542160:intron | 45.0% | |
| TATTGCGGAAATGCTGGCAA+AGG | - | chr4_1:26239598-26239617 | Msa0542160:intron | 45.0% | |
| ! | CATCTTCCTCTGGGAGAAAA+TGG | + | chr4_1:26241264-26241283 | None:intergenic | 45.0% |
| !! | AAGTTTCCCTTGGTTCTGCA+TGG | + | chr4_1:26241404-26241423 | None:intergenic | 45.0% |
| AGTCCATAGTGTAACCGAAG+AGG | - | chr4_1:26241474-26241493 | Msa0542160:intron | 45.0% | |
| GTCCATAGTGTAACCGAAGA+GGG | - | chr4_1:26241475-26241494 | Msa0542160:intron | 45.0% | |
| ATCCCTCTTCGGTTACACTA+TGG | + | chr4_1:26241480-26241499 | None:intergenic | 45.0% | |
| GCATCTGAAGGACAGAACTA+TGG | - | chr4_1:26241535-26241554 | Msa0542160:intron | 45.0% | |
| TCTGAAGGACAGAACTATGG+AGG | - | chr4_1:26241538-26241557 | Msa0542160:intron | 45.0% | |
| TGGAGGAGCTTATGATCCTT+TGG | - | chr4_1:26241555-26241574 | Msa0542160:intron | 45.0% | |
| !! | CGGCAGTCAATAATGGACTT+AGG | + | chr4_1:26241868-26241887 | None:intergenic | 45.0% |
| ACTGCCGAATAATCTCATGC+AGG | - | chr4_1:26241881-26241900 | Msa0542160:intron | 45.0% | |
| TCATGCAGGTTAGAAGAGGA+TGG | - | chr4_1:26241895-26241914 | Msa0542160:intron | 45.0% | |
| CATGCAGGTTAGAAGAGGAT+GGG | - | chr4_1:26241896-26241915 | Msa0542160:intron | 45.0% | |
| ATGGGATGCCTATATTCGAC+CGG | - | chr4_1:26241914-26241933 | Msa0542160:intron | 45.0% | |
| TGCGACTGCACAAAGTTACA+AGG | + | chr4_1:26242057-26242076 | None:intergenic | 45.0% | |
| GTAAGATGCCCATATCTCGT+TGG | + | chr4_1:26242113-26242132 | None:intergenic | 45.0% | |
| CGAGATATGGGCATCTTACT+TGG | - | chr4_1:26242114-26242133 | Msa0542160:CDS | 45.0% | |
| ! | TATGGGCATCTTACTTGGTG+AGG | - | chr4_1:26242119-26242138 | Msa0542160:CDS | 45.0% |
| !! | ACCAGCATTGATCGCAAGAT+TGG | - | chr4_1:26242169-26242188 | Msa0542160:CDS | 45.0% |
| ACCAATCTTGCGATCAATGC+TGG | + | chr4_1:26242173-26242192 | None:intergenic | 45.0% | |
| ATCGCAAGATCGTACGATCT+TGG | - | chr4_1:26242206-26242225 | Msa0542160:CDS | 45.0% | |
| TCGCAAGATCGTACGATCTT+GGG | - | chr4_1:26242207-26242226 | Msa0542160:CDS | 45.0% | |
| ! | AAACCCCGGTGTAAGCTTTT+TGG | - | chr4_1:26242303-26242322 | Msa0542160:intron | 45.0% |
| TGCTGCCAAAAAGCTTACAC+CGG | + | chr4_1:26242311-26242330 | None:intergenic | 45.0% | |
| GGACCGATCACAGACATTTC+TGG | + | chr4_1:26239024-26239043 | None:intergenic | 50.0% | |
| GAAATGTCTGTGATCGGTCC+AGG | - | chr4_1:26239024-26239043 | Msa0542160:three_prime_UTR | 50.0% | |
| ! | GAAGTGTCTAGAGGACAGAG+GGG | - | chr4_1:26239376-26239395 | Msa0542160:intron | 50.0% |
| TTGCGGATGAAGCAAGTCCA+TGG | - | chr4_1:26239489-26239508 | Msa0542160:intron | 50.0% | |
| TGCGGATGAAGCAAGTCCAT+GGG | - | chr4_1:26239490-26239509 | Msa0542160:intron | 50.0% | |
| AAGAGAAATCAGCAGTGGCC+AGG | - | chr4_1:26239513-26239532 | Msa0542160:intron | 50.0% | |
| GAAGCGTATTGCGGAAATGC+TGG | - | chr4_1:26239592-26239611 | Msa0542160:intron | 50.0% | |
| TTGACCGAGAGGCTGATGAA+TGG | - | chr4_1:26239737-26239756 | Msa0542160:intron | 50.0% | |
| AAACTTGGAGTTGGAGGTCC+TGG | - | chr4_1:26240006-26240025 | Msa0542160:CDS | 50.0% | |
| AACTTGGAGTTGGAGGTCCT+GGG | - | chr4_1:26240007-26240026 | Msa0542160:CDS | 50.0% | |
| !!! | TGTTTTGCCTTTGGGGTTGC+AGG | - | chr4_1:26240433-26240452 | Msa0542160:intron | 50.0% |
| !!! | GTTTTGCCTTTGGGGTTGCA+GGG | - | chr4_1:26240434-26240453 | Msa0542160:intron | 50.0% |
| ! | ACAGCTCGAGTTGCTCTTGA+TGG | - | chr4_1:26240739-26240758 | Msa0542160:intron | 50.0% |
| ! | AGAAGAGGAGCGTGAAGCTT+TGG | - | chr4_1:26241318-26241337 | Msa0542160:intron | 50.0% |
| AGATGCAATTGCAACTGCCG+AGG | - | chr4_1:26241366-26241385 | Msa0542160:intron | 50.0% | |
| CATGGCTTTCCTGGATTCCT+CGG | + | chr4_1:26241386-26241405 | None:intergenic | 50.0% | |
| !! | TTGGTTCTGCATGGCTTTCC+TGG | + | chr4_1:26241395-26241414 | None:intergenic | 50.0% |
| AGGAAAGCCATGCAGAACCA+AGG | - | chr4_1:26241394-26241413 | Msa0542160:intron | 50.0% | |
| GGAAAGCCATGCAGAACCAA+GGG | - | chr4_1:26241395-26241414 | Msa0542160:intron | 50.0% | |
| TGACATGGGCACATTGATCG+AGG | - | chr4_1:26241624-26241643 | Msa0542160:intron | 50.0% | |
| TGGCACGTAACTGTGCATGA+AGG | - | chr4_1:26241731-26241750 | Msa0542160:intron | 50.0% | |
| TGGGATGCCTATATTCGACC+GGG | - | chr4_1:26241915-26241934 | Msa0542160:intron | 50.0% | |
| ACTTTGTGCAGTCGCATACC+AGG | - | chr4_1:26242061-26242080 | Msa0542160:CDS | 50.0% | |
| TCCTCCAGCCAACGAGATAT+GGG | - | chr4_1:26242102-26242121 | Msa0542160:CDS | 50.0% | |
| CTTGCGATCAATGCTGGTGA+TGG | + | chr4_1:26242167-26242186 | None:intergenic | 50.0% | |
| !! | GCAAGATTGGTGATGGCCAT+CGG | - | chr4_1:26242182-26242201 | Msa0542160:CDS | 50.0% |
| GTACGATCTTGCGATTCCGA+TGG | + | chr4_1:26242201-26242220 | None:intergenic | 50.0% | |
| ! | ATGGTTTTCCTGGCAAACCC+CGG | - | chr4_1:26242289-26242308 | Msa0542160:intron | 50.0% |
| CTGCCAAAAAGCTTACACCG+GGG | + | chr4_1:26242309-26242328 | None:intergenic | 50.0% | |
| GCTGCCAAAAAGCTTACACC+GGG | + | chr4_1:26242310-26242329 | None:intergenic | 50.0% | |
| ACCGAGAGGCTGATGAATGG+AGG | - | chr4_1:26239740-26239759 | Msa0542160:intron | 55.0% | |
| CCCTCCATTCATCAGCCTCT+CGG | + | chr4_1:26239744-26239763 | None:intergenic | 55.0% | |
| CCGAGAGGCTGATGAATGGA+GGG | - | chr4_1:26239741-26239760 | Msa0542160:intron | 55.0% | |
| AGGCTGATGAATGGAGGGCT+AGG | - | chr4_1:26239746-26239765 | Msa0542160:intron | 55.0% | |
| GGCTGATGAATGGAGGGCTA+GGG | - | chr4_1:26239747-26239766 | Msa0542160:intron | 55.0% | |
| ! | GAAGTACCCTGCAACCCCAA+AGG | + | chr4_1:26240443-26240462 | None:intergenic | 55.0% |
| ! | TTGGGGTTGCAGGGTACTTC+TGG | - | chr4_1:26240443-26240462 | Msa0542160:intron | 55.0% |
| ! | GCTCGAGTTGCTCTTGATGG+AGG | - | chr4_1:26240742-26240761 | Msa0542160:intron | 55.0% |
| !! | TGCAGGCCATTTTCTCCCAG+AGG | - | chr4_1:26241255-26241274 | Msa0542160:intron | 55.0% |
| TGAGAGAGTTCAGGCTGCAG+TGG | - | chr4_1:26241294-26241313 | Msa0542160:intron | 55.0% | |
| TCAGGCTGCAGTGGAAGAAG+AGG | - | chr4_1:26241303-26241322 | Msa0542160:intron | 55.0% | |
| TTGCAACTGCCGAGGAATCC+AGG | - | chr4_1:26241374-26241393 | Msa0542160:intron | 55.0% | |
| GATGCCTATATTCGACCGGG+AGG | - | chr4_1:26241918-26241937 | Msa0542160:intron | 55.0% | |
| CCTTCCTCCCGGTCGAATAT+AGG | + | chr4_1:26241925-26241944 | None:intergenic | 55.0% | |
| CCTATATTCGACCGGGAGGA+AGG | - | chr4_1:26241922-26241941 | Msa0542160:intron | 55.0% | |
| CAGTCGCATACCAGGACACT+GGG | - | chr4_1:26242069-26242088 | Msa0542160:CDS | 55.0% | |
| ! | CATATCTCGTTGGCTGGAGG+AGG | + | chr4_1:26242103-26242122 | None:intergenic | 55.0% |
| CTCCTCCAGCCAACGAGATA+TGG | - | chr4_1:26242101-26242120 | Msa0542160:CDS | 55.0% | |
| GATGCCCATATCTCGTTGGC+TGG | + | chr4_1:26242109-26242128 | None:intergenic | 55.0% | |
| GAGGGCTAGGGAGATTGCCA+AGG | - | chr4_1:26239759-26239778 | Msa0542160:intron | 60.0% | |
| CTTCGTCTGGGTTCGAACCC+AGG | + | chr4_1:26240027-26240046 | None:intergenic | 60.0% | |
| CTGGGTTCGAACCCAGACGA+AGG | - | chr4_1:26240025-26240044 | Msa0542160:CDS | 60.0% | |
| GCAGTCGCATACCAGGACAC+TGG | - | chr4_1:26242068-26242087 | Msa0542160:CDS | 60.0% | |
| ! | ATCTCGTTGGCTGGAGGAGG+AGG | + | chr4_1:26242100-26242119 | None:intergenic | 60.0% |
| ! | GCCCATATCTCGTTGGCTGG+AGG | + | chr4_1:26242106-26242125 | None:intergenic | 60.0% |
| AGCTTACACCGGGGTTTGCC+AGG | + | chr4_1:26242300-26242319 | None:intergenic | 60.0% | |
| GGAGGCTGAACCCAGTGTCC+TGG | + | chr4_1:26242082-26242101 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 26239019 | 26242550 | 26239019 | ID=Msa0542160;Name=Msa0542160 |
| chr4_1 | mRNA | 26239019 | 26242550 | 26239019 | ID=Msa0542160-mRNA-1;Parent=Msa0542160;Name=Msa0542160-mRNA-1;_AED=0.08;_eAED=0.08;_QI=61|1|1|1|0.75|0.66|9|325|355 |
| chr4_1 | exon | 26239019 | 26239312 | 26239019 | ID=Msa0542160-mRNA-1:exon:7197;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26239388 | 26239497 | 26239388 | ID=Msa0542160-mRNA-1:exon:7196;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26239626 | 26239666 | 26239626 | ID=Msa0542160-mRNA-1:exon:7195;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26239924 | 26240309 | 26239924 | ID=Msa0542160-mRNA-1:exon:7194;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26240754 | 26240826 | 26240754 | ID=Msa0542160-mRNA-1:exon:7193;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26241154 | 26241219 | 26241154 | ID=Msa0542160-mRNA-1:exon:7192;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26241771 | 26241854 | 26241771 | ID=Msa0542160-mRNA-1:exon:7191;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26241950 | 26242286 | 26241950 | ID=Msa0542160-mRNA-1:exon:7190;Parent=Msa0542160-mRNA-1 |
| chr4_1 | exon | 26242488 | 26242550 | 26242488 | ID=Msa0542160-mRNA-1:exon:7189;Parent=Msa0542160-mRNA-1 |
| chr4_1 | five_prime_UTR | 26242490 | 26242550 | 26242490 | ID=Msa0542160-mRNA-1:five_prime_utr;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26242488 | 26242489 | 26242488 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26241950 | 26242286 | 26241950 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26241771 | 26241854 | 26241771 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26241154 | 26241219 | 26241154 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26240754 | 26240826 | 26240754 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26239924 | 26240309 | 26239924 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26239626 | 26239666 | 26239626 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | CDS | 26239419 | 26239497 | 26239419 | ID=Msa0542160-mRNA-1:cds;Parent=Msa0542160-mRNA-1 |
| chr4_1 | three_prime_UTR | 26239388 | 26239418 | 26239388 | ID=Msa0542160-mRNA-1:three_prime_utr;Parent=Msa0542160-mRNA-1 |
| chr4_1 | three_prime_UTR | 26239019 | 26239312 | 26239019 | ID=Msa0542160-mRNA-1:three_prime_utr;Parent=Msa0542160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
