Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619180 | XP_039684838.1 | 98.252 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619180 | sp|Q9SJ05|SK1_ARATH | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.14e-110 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0619180 | -0.802971 | 4.355800e-49 | -8.615850e-47 |
| Msa0004060 | Msa0619180 | 0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0030280 | Msa0619180 | 0.819229 | 1.296074e-52 | -8.615850e-47 |
| Msa0031820 | Msa0619180 | 0.805748 | 1.149380e-49 | -8.615850e-47 |
| Msa0032320 | Msa0619180 | 0.812720 | 3.678296e-51 | -8.615850e-47 |
| Msa0047280 | Msa0619180 | 0.806841 | 6.762720e-50 | -8.615850e-47 |
| Msa0065010 | Msa0619180 | 0.805018 | 1.634548e-49 | -8.615850e-47 |
| Msa0094010 | Msa0619180 | 0.829160 | 6.013855e-55 | -8.615850e-47 |
| Msa0100800 | Msa0619180 | 0.820749 | 5.818348e-53 | -8.615850e-47 |
| Msa0101880 | Msa0619180 | 0.837381 | 5.374187e-57 | -8.615850e-47 |
| Msa0104610 | Msa0619180 | 0.800730 | 1.256599e-48 | -8.615850e-47 |
| Msa0108870 | Msa0619180 | 0.809186 | 2.142938e-50 | -8.615850e-47 |
| Msa0119320 | Msa0619180 | 0.803476 | 3.423989e-49 | -8.615850e-47 |
| Msa0610090 | Msa0619180 | 0.811435 | 7.011914e-51 | -8.615850e-47 |
| Msa0617770 | Msa0619180 | -0.813444 | 2.551553e-51 | -8.615850e-47 |
| Msa0619180 | Msa0619920 | 0.812243 | 4.676999e-51 | -8.615850e-47 |
| Msa0619180 | Msa0626680 | 0.819533 | 1.104654e-52 | -8.615850e-47 |
| Msa0619180 | Msa0646130 | 0.814922 | 1.203951e-51 | -8.615850e-47 |
| Msa0619180 | Msa0648520 | 0.817173 | 3.782061e-52 | -8.615850e-47 |
| Msa0619180 | Msa0658480 | 0.819624 | 1.053216e-52 | -8.615850e-47 |
| Msa0619180 | Msa0659990 | 0.804229 | 2.388226e-49 | -8.615850e-47 |
| Msa0619180 | Msa0664760 | 0.822169 | 2.735704e-53 | -8.615850e-47 |
| Msa0619180 | Msa0687230 | 0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa0619180 | Msa0704800 | 0.911265 | 7.394961e-83 | -8.615850e-47 |
| Msa0619180 | Msa0706390 | 0.804357 | 2.245540e-49 | -8.615850e-47 |
| Msa0619180 | Msa0707390 | 0.800979 | 1.117573e-48 | -8.615850e-47 |
| Msa0619180 | Msa0711070 | 0.817116 | 3.895413e-52 | -8.615850e-47 |
| Msa0619180 | Msa0735310 | 0.810878 | 9.257355e-51 | -8.615850e-47 |
| Msa0619180 | Msa0742510 | 0.819972 | 8.772543e-53 | -8.615850e-47 |
| Msa0619180 | Msa0743680 | 0.817054 | 4.024144e-52 | -8.615850e-47 |
| Msa0619180 | Msa0744090 | 0.822147 | 2.767324e-53 | -8.615850e-47 |
| Msa0619180 | Msa0753770 | 0.812373 | 4.380945e-51 | -8.615850e-47 |
| Msa0619180 | Msa0756930 | 0.815379 | 9.529519e-52 | -8.615850e-47 |
| Msa0619180 | Msa0779550 | 0.804754 | 1.855523e-49 | -8.615850e-47 |
| Msa0619180 | Msa0781270 | 0.800088 | 1.698113e-48 | -8.615850e-47 |
| Msa0619180 | Msa0784620 | 0.860571 | 1.882766e-63 | -8.615850e-47 |
| Msa0619180 | Msa0786130 | 0.812123 | 4.966554e-51 | -8.615850e-47 |
| Msa0619180 | Msa0795660 | 0.828519 | 8.596123e-55 | -8.615850e-47 |
| Msa0619180 | Msa0799000 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0619180 | Msa0824730 | 0.856516 | 3.051106e-62 | -8.615850e-47 |
| Msa0619180 | Msa0825280 | 0.820427 | 6.900356e-53 | -8.615850e-47 |
| Msa0619180 | Msa0837650 | 0.805302 | 1.425552e-49 | -8.615850e-47 |
| Msa0619180 | Msa0851470 | 0.816190 | 6.284003e-52 | -8.615850e-47 |
| Msa0619180 | Msa0863800 | 0.806701 | 7.238589e-50 | -8.615850e-47 |
| Msa0619180 | Msa0869010 | 0.817428 | 3.314556e-52 | -8.615850e-47 |
| Msa0619180 | Msa0895310 | 0.830355 | 3.077308e-55 | -8.615850e-47 |
| Msa0619180 | Msa0940830 | 0.808775 | 2.624116e-50 | -8.615850e-47 |
| Msa0619180 | Msa0942230 | 0.821442 | 4.029189e-53 | -8.615850e-47 |
| Msa0619180 | Msa0947530 | -0.837762 | 4.293130e-57 | -8.615850e-47 |
| Msa0619180 | Msa0955190 | 0.804873 | 1.752688e-49 | -8.615850e-47 |
| Msa0619180 | Msa0959010 | 0.805078 | 1.588239e-49 | -8.615850e-47 |
| Msa0619180 | Msa0977310 | 0.803716 | 3.052165e-49 | -8.615850e-47 |
| Msa0619180 | Msa1004420 | 0.819466 | 1.144711e-52 | -8.615850e-47 |
| Msa0619180 | Msa1030930 | 0.827309 | 1.680262e-54 | -8.615850e-47 |
| Msa0619180 | Msa1070050 | 0.820941 | 5.256447e-53 | -8.615850e-47 |
| Msa0619180 | Msa1071530 | 0.801196 | 1.009286e-48 | -8.615850e-47 |
| Msa0619180 | Msa1073400 | 0.814942 | 1.191624e-51 | -8.615850e-47 |
| Msa0619180 | Msa1083880 | 0.822399 | 2.418478e-53 | -8.615850e-47 |
| Msa0619180 | Msa1087510 | -0.804691 | 1.913014e-49 | -8.615850e-47 |
| Msa0619180 | Msa1094540 | -0.805269 | 1.448246e-49 | -8.615850e-47 |
| Msa0619180 | Msa1113590 | 0.809167 | 2.162946e-50 | -8.615850e-47 |
| Msa0619180 | Msa1126850 | 0.801548 | 8.547571e-49 | -8.615850e-47 |
| Msa0619180 | Msa1162830 | 0.808616 | 2.838010e-50 | -8.615850e-47 |
| Msa0619180 | Msa1169720 | 0.805200 | 1.497434e-49 | -8.615850e-47 |
| Msa0619180 | Msa1181170 | -0.838415 | 2.914466e-57 | -8.615850e-47 |
| Msa0619180 | Msa1188560 | 0.803428 | 3.503092e-49 | -8.615850e-47 |
| Msa0619180 | Msa1192850 | 0.803082 | 4.129824e-49 | -8.615850e-47 |
| Msa0619180 | Msa1198880 | 0.826331 | 2.876393e-54 | -8.615850e-47 |
| Msa0619180 | Msa1211050 | -0.824046 | 9.976874e-54 | -8.615850e-47 |
| Msa0619180 | Msa1223330 | 0.832390 | 9.714137e-56 | -8.615850e-47 |
| Msa0619180 | Msa1246530 | -0.828764 | 7.497811e-55 | -8.615850e-47 |
| Msa0619180 | Msa1253810 | 0.853123 | 2.941396e-61 | -8.615850e-47 |
| Msa0619180 | Msa1256770 | 0.802274 | 6.064309e-49 | -8.615850e-47 |
| Msa0619180 | Msa1262960 | 0.809030 | 2.314464e-50 | -8.615850e-47 |
| Msa0619180 | Msa1296300 | 0.827512 | 1.501657e-54 | -8.615850e-47 |
| Msa0619180 | Msa1323990 | 0.826700 | 2.349669e-54 | -8.615850e-47 |
| Msa0619180 | Msa1340040 | -0.807176 | 5.744375e-50 | -8.615850e-47 |
| Msa0619180 | Msa1340830 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0619180 | Msa1363700 | 0.805219 | 1.483858e-49 | -8.615850e-47 |
| Msa0619180 | Msa1370620 | 0.803196 | 3.912393e-49 | -8.615850e-47 |
| Msa0619180 | Msa1380970 | 0.805396 | 1.362018e-49 | -8.615850e-47 |
| Msa0619180 | Msa1398860 | 0.831085 | 2.038027e-55 | -8.615850e-47 |
| Msa0619180 | Msa1408150 | 0.805527 | 1.278572e-49 | -8.615850e-47 |
| Msa0619180 | Msa1422910 | 0.807196 | 5.688198e-50 | -8.615850e-47 |
| Msa0619180 | Msa1438640 | 0.804614 | 1.984704e-49 | -8.615850e-47 |
| Msa0619180 | Msa1445960 | 0.803668 | 3.123750e-49 | -8.615850e-47 |
| Msa0619180 | Msa1449910 | 0.812535 | 4.037874e-51 | -8.615850e-47 |
| Msa0126770 | Msa0619180 | 0.830327 | 3.125664e-55 | -8.615850e-47 |
| Msa0131450 | Msa0619180 | 0.805211 | 1.489274e-49 | -8.615850e-47 |
| Msa0139990 | Msa0619180 | 0.805517 | 1.285001e-49 | -8.615850e-47 |
| Msa0145070 | Msa0619180 | 0.832954 | 7.036955e-56 | -8.615850e-47 |
| Msa0152840 | Msa0619180 | 0.814527 | 1.472093e-51 | -8.615850e-47 |
| Msa0155330 | Msa0619180 | 0.819739 | 9.915022e-53 | -8.615850e-47 |
| Msa0161070 | Msa0619180 | -0.811545 | 6.636235e-51 | -8.615850e-47 |
| Msa0164220 | Msa0619180 | 0.803797 | 2.936328e-49 | -8.615850e-47 |
| Msa0165300 | Msa0619180 | 0.805847 | 1.095368e-49 | -8.615850e-47 |
| Msa0165440 | Msa0619180 | 0.808115 | 3.628344e-50 | -8.615850e-47 |
| Msa0171850 | Msa0619180 | 0.829763 | 4.291068e-55 | -8.615850e-47 |
| Msa0173170 | Msa0619180 | 0.808230 | 3.429992e-50 | -8.615850e-47 |
| Msa0186310 | Msa0619180 | 0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa0196340 | Msa0619180 | 0.843456 | 1.385837e-58 | -8.615850e-47 |
| Msa0198940 | Msa0619180 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0208810 | Msa0619180 | 0.822866 | 1.883293e-53 | -8.615850e-47 |
| Msa0212750 | Msa0619180 | -0.856411 | 3.277344e-62 | -8.615850e-47 |
| Msa0215360 | Msa0619180 | 0.805015 | 1.637149e-49 | -8.615850e-47 |
| Msa0219250 | Msa0619180 | -0.806527 | 7.876836e-50 | -8.615850e-47 |
| Msa0221600 | Msa0619180 | 0.806788 | 6.939438e-50 | -8.615850e-47 |
| Msa0229360 | Msa0619180 | 0.800202 | 1.609590e-48 | -8.615850e-47 |
| Msa0238230 | Msa0619180 | 0.844288 | 8.293791e-59 | -8.615850e-47 |
| Msa0377530 | Msa0619180 | 0.813263 | 2.796721e-51 | -8.615850e-47 |
| Msa0392200 | Msa0619180 | 0.820126 | 8.088398e-53 | -8.615850e-47 |
| Msa0403190 | Msa0619180 | 0.810234 | 1.275701e-50 | -8.615850e-47 |
| Msa0412440 | Msa0619180 | 0.807667 | 4.518690e-50 | -8.615850e-47 |
| Msa0416400 | Msa0619180 | 0.801254 | 9.820369e-49 | -8.615850e-47 |
| Msa0426810 | Msa0619180 | 0.807579 | 4.718308e-50 | -8.615850e-47 |
| Msa0431770 | Msa0619180 | 0.852914 | 3.376933e-61 | -8.615850e-47 |
| Msa0437510 | Msa0619180 | 0.818635 | 1.768885e-52 | -8.615850e-47 |
| Msa0439890 | Msa0619180 | 0.809814 | 1.570634e-50 | -8.615850e-47 |
| Msa0461590 | Msa0619180 | 0.806497 | 7.993835e-50 | -8.615850e-47 |
| Msa0465920 | Msa0619180 | 0.808168 | 3.536474e-50 | -8.615850e-47 |
| Msa0465960 | Msa0619180 | 0.803832 | 2.888192e-49 | -8.615850e-47 |
| Msa0478580 | Msa0619180 | 0.826717 | 2.327089e-54 | -8.615850e-47 |
| Msa0239940 | Msa0619180 | 0.804872 | 1.753234e-49 | -8.615850e-47 |
| Msa0241740 | Msa0619180 | 0.808427 | 3.114582e-50 | -8.615850e-47 |
| Msa0245850 | Msa0619180 | 0.806382 | 8.454139e-50 | -8.615850e-47 |
| Msa0258880 | Msa0619180 | -0.800046 | 1.731701e-48 | -8.615850e-47 |
| Msa0267870 | Msa0619180 | 0.804357 | 2.245540e-49 | -8.615850e-47 |
| Msa0277420 | Msa0619180 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0288730 | Msa0619180 | 0.800965 | 1.124881e-48 | -8.615850e-47 |
| Msa0308220 | Msa0619180 | 0.807687 | 4.474922e-50 | -8.615850e-47 |
| Msa0337510 | Msa0619180 | 0.803293 | 3.736243e-49 | -8.615850e-47 |
| Msa0346990 | Msa0619180 | 0.820642 | 6.159078e-53 | -8.615850e-47 |
| Msa0506940 | Msa0619180 | 0.826674 | 2.383489e-54 | -8.615850e-47 |
| Msa0517490 | Msa0619180 | 0.820053 | 8.401995e-53 | -8.615850e-47 |
| Msa0534080 | Msa0619180 | 0.810792 | 9.665579e-51 | -8.615850e-47 |
| Msa0537530 | Msa0619180 | 0.819745 | 9.883290e-53 | -8.615850e-47 |
| Msa0542160 | Msa0619180 | 0.811707 | 6.117576e-51 | -8.615850e-47 |
| Msa0549590 | Msa0619180 | 0.805245 | 1.465055e-49 | -8.615850e-47 |
| Msa0578090 | Msa0619180 | 0.836946 | 6.943472e-57 | -8.615850e-47 |
| Msa0580950 | Msa0619180 | 0.803112 | 4.072879e-49 | -8.615850e-47 |
| Msa0586850 | Msa0619180 | 0.825622 | 4.238809e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619180 | MtrunA17_Chr8g0383021 | 98.252 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 0.0 | 580 |
| Msa0619180 | MtrunA17_Chr6g0462401 | 29.915 | 234 | 159 | 2 | 40 | 273 | 49 | 277 | 2.90e-34 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0619180 | AT2G21940.4 | 60.769 | 260 | 98 | 3 | 22 | 281 | 40 | 295 | 1.37e-111 | 325 |
| Msa0619180 | AT2G21940.2 | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.24e-111 | 323 |
| Msa0619180 | AT2G21940.5 | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.24e-111 | 323 |
| Msa0619180 | AT2G21940.1 | 60.769 | 260 | 97 | 3 | 22 | 281 | 40 | 294 | 6.24e-111 | 323 |
| Msa0619180 | AT4G39540.2 | 56.089 | 271 | 115 | 3 | 16 | 282 | 23 | 293 | 5.85e-106 | 310 |
| Msa0619180 | AT4G39540.1 | 56.089 | 271 | 115 | 3 | 16 | 282 | 23 | 293 | 5.85e-106 | 310 |
| Msa0619180 | AT4G39540.3 | 54.122 | 279 | 116 | 4 | 16 | 282 | 23 | 301 | 2.34e-102 | 301 |
| Msa0619180 | AT2G21940.7 | 59.910 | 222 | 84 | 3 | 22 | 243 | 40 | 256 | 3.06e-92 | 275 |
| Msa0619180 | AT2G21940.3 | 59.910 | 222 | 84 | 3 | 22 | 243 | 40 | 256 | 3.06e-92 | 275 |
| Msa0619180 | AT2G21940.6 | 59.910 | 222 | 84 | 3 | 22 | 243 | 40 | 256 | 3.06e-92 | 275 |
| Msa0619180 | AT3G26900.3 | 36.000 | 200 | 116 | 2 | 75 | 273 | 75 | 263 | 6.80e-31 | 117 |
| Msa0619180 | AT3G26900.1 | 36.000 | 200 | 116 | 2 | 75 | 273 | 75 | 263 | 6.80e-31 | 117 |
| Msa0619180 | AT3G26900.2 | 36.000 | 200 | 116 | 2 | 75 | 273 | 75 | 263 | 6.80e-31 | 117 |
Find 97 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCTATCTTCTTCTATTT+TGG | 0.032803 | 4_2:-70245439 | Msa0619180:three_prime_UTR |
| GGTCTCCCATGGGTCTTAAT+TGG | 0.224798 | 4_2:-70245417 | Msa0619180:three_prime_UTR |
| TAGCAACAGTTTGAATTTCT+AGG | 0.232709 | 4_2:-70245638 | Msa0619180:three_prime_UTR |
| TACAACATACAATCTCTTAC+AGG | 0.309721 | 4_2:+70245468 | None:intergenic |
| GAAATTCAAACTGTTGCTAT+TGG | 0.319091 | 4_2:+70245642 | None:intergenic |
| TCCCACGGCTGCAATTCTTT+TGG | 0.328611 | 4_2:+70246883 | None:intergenic |
| TGCAGATATAGCAACAAAAC+TGG | 0.355991 | 4_2:-70246089 | Msa0619180:intron |
| GCTGATATATTCAAGCTCTA+TGG | 0.360240 | 4_2:-70248942 | Msa0619180:CDS |
| TGTTCTTATAACAATATTCC+AGG | 0.365109 | 4_2:-70251079 | Msa0619180:intron |
| CTGTTGTGCGGCCTATTAAT+TGG | 0.372746 | 4_2:-70247068 | Msa0619180:intron |
| AAACCGTTGTATTTAACTTC+AGG | 0.380243 | 4_2:-70245267 | None:intergenic |
| GAGTGGAAGCAAAATCTAAT+TGG | 0.380675 | 4_2:+70251456 | None:intergenic |
| CACTAAGTGGGGTCGTCAAC+CGG | 0.387217 | 4_2:+70245579 | None:intergenic |
| ACTAATGTGTGTTCCGTAGA+TGG | 0.391543 | 4_2:+70245353 | None:intergenic |
| CGTTATTCTCACACAATTCT+CGG | 0.402884 | 4_2:+70251180 | None:intergenic |
| TTGATTGAGGAAGAGGTTGA+TGG | 0.403718 | 4_2:-70248975 | Msa0619180:CDS |
| TGCAAGATAGTAGTGCGATT+TGG | 0.410666 | 4_2:-70245830 | Msa0619180:exon |
| GTAGCTTCAACATTGGAATC+TGG | 0.413868 | 4_2:-70250017 | Msa0619180:intron |
| AAATGACAAGTTTATGCATC+AGG | 0.414811 | 4_2:+70247106 | None:intergenic |
| TTGCAGGCGCTAGAGCAAAT+TGG | 0.422109 | 4_2:-70245883 | Msa0619180:intron |
| TGTATATACTATATATATTC+CGG | 0.424719 | 4_2:-70245598 | Msa0619180:three_prime_UTR |
| CATAAACTTGTCATTTCTAC+AGG | 0.428732 | 4_2:-70247099 | Msa0619180:CDS |
| AAATTGACATGCAGGAATGA+TGG | 0.432438 | 4_2:-70249645 | Msa0619180:intron |
| TGATACATTGATTGAGGAAG+AGG | 0.440199 | 4_2:-70248982 | Msa0619180:CDS |
| ACCTCAATTGCAATTTCAGT+TGG | 0.443438 | 4_2:+70246040 | None:intergenic |
| GAGAATTGTGTGAGAATAAC+GGG | 0.444406 | 4_2:-70251178 | Msa0619180:CDS |
| TACTCTTGTAGCTTCAACAT+TGG | 0.455200 | 4_2:-70250024 | Msa0619180:intron |
| GGCTCTGGGAAGACAACTGT+GGG | 0.455572 | 4_2:-70249623 | Msa0619180:CDS |
| TTCTCGGGTCGGGTAAGAAC+CGG | 0.470591 | 4_2:+70251196 | None:intergenic |
| TGTTCAAATGTTGCATCTAC+CGG | 0.470846 | 4_2:-70251215 | Msa0619180:CDS |
| CATGCAGGAATGATGGGCTC+TGG | 0.472739 | 4_2:-70249638 | Msa0619180:intron |
| TCCAACTGAAATTGCAATTG+AGG | 0.477103 | 4_2:-70246041 | Msa0619180:intron |
| CAGATTCTGCCGTATTTAAG+TGG | 0.478853 | 4_2:-70249767 | Msa0619180:CDS |
| TCTCACACAATTCTCGGGTC+GGG | 0.489860 | 4_2:+70251186 | None:intergenic |
| CGAGAATTGTGTGAGAATAA+CGG | 0.490051 | 4_2:-70251179 | Msa0619180:CDS |
| CGACCCCACTTAGTGGGATA+AGG | 0.503384 | 4_2:-70245571 | Msa0619180:three_prime_UTR |
| GTTTCCCCTTGAGGAAGAGT+TGG | 0.510532 | 4_2:-70249985 | Msa0619180:CDS |
| AATCTAATTGGAATGGATGA+AGG | 0.514196 | 4_2:+70251468 | None:intergenic |
| TTCTAATGAGACTCTAGCAT+TGG | 0.514662 | 4_2:+70246462 | None:intergenic |
| TTATAGTGATACATTGATTG+AGG | 0.517101 | 4_2:-70248988 | Msa0619180:intron |
| TTCTCACACAATTCTCGGGT+CGG | 0.518453 | 4_2:+70251185 | None:intergenic |
| CGGTTGACGACCCCACTTAG+TGG | 0.520350 | 4_2:-70245578 | Msa0619180:three_prime_UTR |
| AATTGACATGCAGGAATGAT+GGG | 0.520917 | 4_2:-70249644 | Msa0619180:intron |
| GAAGCAAAATCTAATTGGAA+TGG | 0.532321 | 4_2:+70251461 | None:intergenic |
| AGATGTACCAGTGGAAGCAT+TGG | 0.540460 | 4_2:-70246906 | Msa0619180:CDS |
| CTTGTCATTTCTACAGGTGG+AGG | 0.541169 | 4_2:-70247093 | Msa0619180:CDS |
| AGAATCTTTCTTTCGCGAGA+AGG | 0.544258 | 4_2:-70248919 | Msa0619180:CDS |
| TAACGGGTTGTTCTTTGAGT+CGG | 0.545142 | 4_2:-70251162 | Msa0619180:CDS |
| TGAGGAAGAGTTGGTTCTGA+AGG | 0.546791 | 4_2:-70249976 | Msa0619180:intron |
| GGTTGTTCTTTGAGTCGGAC+CGG | 0.550470 | 4_2:-70251157 | Msa0619180:CDS |
| GTTATTCTCACACAATTCTC+GGG | 0.550567 | 4_2:+70251181 | None:intergenic |
| TGTATTGCCGCTGTATGTAA+TGG | 0.551325 | 4_2:-70251248 | Msa0619180:exon |
| GGGCGCTGTATATATGTTGT+TGG | 0.552480 | 4_2:-70249746 | Msa0619180:intron |
| TTCAGCCTTATCCCACTAAG+TGG | 0.557471 | 4_2:+70245566 | None:intergenic |
| CCTCTTCTACACGATGAAGC+AGG | 0.557589 | 4_2:-70246848 | Msa0619180:CDS |
| TCAGCCTTATCCCACTAAGT+GGG | 0.561700 | 4_2:+70245567 | None:intergenic |
| ATTTCTCAAACAAATCTACC+AGG | 0.562522 | 4_2:-70251418 | Msa0619180:intron |
| TCGGTGCAAGAAGGTTTCTA+CGG | 0.564921 | 4_2:-70251110 | Msa0619180:CDS |
| ATCTTTCTTTCGCGAGAAGG+AGG | 0.565809 | 4_2:-70248916 | Msa0619180:intron |
| ATACAGCGCCCACTTAAATA+CGG | 0.566584 | 4_2:+70249758 | None:intergenic |
| GGCCAAAAGAATTGCAGCCG+TGG | 0.570496 | 4_2:-70246885 | Msa0619180:CDS |
| AAACTTGTCATTTCTACAGG+TGG | 0.573379 | 4_2:-70247096 | Msa0619180:CDS |
| GGTTGACGACCCCACTTAGT+GGG | 0.576686 | 4_2:-70245577 | Msa0619180:three_prime_UTR |
| AAGGCACCAATTAAGACCCA+TGG | 0.576990 | 4_2:+70245411 | None:intergenic |
| CTGCTTCATCGTGTAGAAGA+GGG | 0.582100 | 4_2:+70246849 | None:intergenic |
| TCAGAACCAACTCTTCCTCA+AGG | 0.583804 | 4_2:+70249979 | None:intergenic |
| CAGAACCAACTCTTCCTCAA+GGG | 0.586131 | 4_2:+70249980 | None:intergenic |
| ATGCAGGAATGATGGGCTCT+GGG | 0.586330 | 4_2:-70249637 | Msa0619180:intron |
| CCTGCTTCATCGTGTAGAAG+AGG | 0.594223 | 4_2:+70246848 | None:intergenic |
| GCAGATATAGCAACAAAACT+GGG | 0.598728 | 4_2:-70246088 | Msa0619180:intron |
| AGATTCTGCCGTATTTAAGT+GGG | 0.599085 | 4_2:-70249766 | Msa0619180:CDS |
| CCAGGAAATATATGCACAAG+GGG | 0.600293 | 4_2:-70246943 | Msa0619180:intron |
| GCCAAAAGAATTGCAGCCGT+GGG | 0.601812 | 4_2:-70246884 | Msa0619180:CDS |
| AATGACAAGTTTATGCATCA+GGG | 0.602843 | 4_2:+70247107 | None:intergenic |
| CAAGCAAGACTGAAGCATGA+AGG | 0.605421 | 4_2:+70245392 | None:intergenic |
| AGGGCATAAGTTTCCCCTTG+AGG | 0.610167 | 4_2:-70249994 | Msa0619180:CDS |
| TGAGACTCTAGCATTGGCGT+TGG | 0.610419 | 4_2:+70246468 | None:intergenic |
| GCTTCAACATTGGAATCTGG+AGG | 0.615047 | 4_2:-70250014 | Msa0619180:CDS |
| ATTCCTGAAGTTAAATACAA+CGG | 0.616967 | 4_2:+70245264 | None:intergenic |
| GGGCTCTGGGAAGACAACTG+TGG | 0.617107 | 4_2:-70249624 | Msa0619180:CDS |
| AGGGCGAGAATTAGTTCCCA+CGG | 0.618683 | 4_2:+70246868 | None:intergenic |
| AGAACCAACTCTTCCTCAAG+GGG | 0.619441 | 4_2:+70249981 | None:intergenic |
| TCAGACGATTCGGTGCAAGA+AGG | 0.619552 | 4_2:-70251119 | Msa0619180:CDS |
| TGCCAGGAAATATATGCACA+AGG | 0.620476 | 4_2:-70246945 | Msa0619180:intron |
| CTATACGAAAGATCCATCTA+CGG | 0.633250 | 4_2:-70245366 | Msa0619180:three_prime_UTR |
| GCCAGGAAATATATGCACAA+GGG | 0.635533 | 4_2:-70246944 | Msa0619180:intron |
| AACAACACCGCACAACAGCA+TGG | 0.638911 | 4_2:+70245747 | None:intergenic |
| AGGCACCAATTAAGACCCAT+GGG | 0.643574 | 4_2:+70245412 | None:intergenic |
| TGTTTGGTTAGATGTACCAG+TGG | 0.652145 | 4_2:-70246915 | Msa0619180:CDS |
| CAGCCTTATCCCACTAAGTG+GGG | 0.657129 | 4_2:+70245568 | None:intergenic |
| CTTCAACATTGGAATCTGGA+GGG | 0.659832 | 4_2:-70250013 | Msa0619180:CDS |
| CAGGTGGAGGTGCTGTTGTG+CGG | 0.664050 | 4_2:-70247080 | Msa0619180:CDS |
| TTAGCATCCATTACATACAG+CGG | 0.666263 | 4_2:+70251241 | None:intergenic |
| ATTAAGGCCATGCTGTTGTG+CGG | 0.694550 | 4_2:-70245754 | Msa0619180:three_prime_UTR |
| CAGGAAATATATGCACAAGG+GGG | 0.768658 | 4_2:-70246942 | Msa0619180:CDS |
| AGCAGGAGATGCATACACTG+CGG | 0.783701 | 4_2:-70246831 | Msa0619180:intron |
| GCTCTGGGAAGACAACTGTG+GGG | 0.798287 | 4_2:-70249622 | Msa0619180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATATTTTTTGATTCA+TGG | - | chr4_2:70247728-70247747 | Msa0619180:intron | 10.0% |
| !!! | AAGAAAATATTTTGTTTATT+TGG | + | chr4_2:70248339-70248358 | None:intergenic | 10.0% |
| !!! | TAATTTTTATACCAATTAAT+AGG | + | chr4_2:70249732-70249751 | None:intergenic | 10.0% |
| !! | ATTATGGATAATTAATATAA+GGG | + | chr4_2:70250179-70250198 | None:intergenic | 10.0% |
| !! | AATTATGGATAATTAATATA+AGG | + | chr4_2:70250180-70250199 | None:intergenic | 10.0% |
| !!! | ATATTAATTATCCATAATTT+TGG | - | chr4_2:70250181-70250200 | Msa0619180:intron | 10.0% |
| !! | AAAATTATGTATAAAAAATG+TGG | + | chr4_2:70251097-70251116 | None:intergenic | 10.0% |
| !!! | TTTTTATACATAATTTTTGT+TGG | - | chr4_2:70251100-70251119 | Msa0619180:CDS | 10.0% |
| !!! | TTTTATACATAATTTTTGTT+GGG | - | chr4_2:70251101-70251120 | Msa0619180:CDS | 10.0% |
| !! | TGGTATATATATACTTAAAA+GGG | + | chr4_2:70246958-70246977 | None:intergenic | 15.0% |
| !! | ATGGTATATATATACTTAAA+AGG | + | chr4_2:70246959-70246978 | None:intergenic | 15.0% |
| !!! | AATTATGTAGCATTTTTTTT+TGG | - | chr4_2:70247404-70247423 | Msa0619180:intron | 15.0% |
| !! | TACATTTAATATTTGATATG+AGG | - | chr4_2:70247491-70247510 | Msa0619180:intron | 15.0% |
| !! | ATTCAAGTGATATTAAATTA+AGG | - | chr4_2:70247530-70247549 | Msa0619180:intron | 15.0% |
| !! | TATTATGCAATAGATAAAAA+CGG | - | chr4_2:70247565-70247584 | Msa0619180:intron | 15.0% |
| !!! | AAAGGTTTTAAGAAATAATT+AGG | - | chr4_2:70248884-70248903 | Msa0619180:intron | 15.0% |
| !! | TAGTACAAAATTTATCAATT+AGG | - | chr4_2:70249002-70249021 | Msa0619180:intron | 15.0% |
| !! | TTATCTTTAATCTCTATAAT+TGG | - | chr4_2:70249125-70249144 | Msa0619180:intron | 15.0% |
| !!! | AAGTAAGTTTTTATGAAATT+CGG | + | chr4_2:70250137-70250156 | None:intergenic | 15.0% |
| !!! | TCATAAAAACTTACTTTTAA+AGG | - | chr4_2:70250141-70250160 | Msa0619180:intron | 15.0% |
| !!! | ATTTTTTTTTCTTCAATTTG+CGG | - | chr4_2:70251003-70251022 | Msa0619180:intron | 15.0% |
| !! | TGTATATACTATATATATTC+CGG | - | chr4_2:70251188-70251207 | Msa0619180:CDS | 15.0% |
| !!! | TCGATTATTATTATTCCTTT+TGG | - | chr4_2:70245442-70245461 | Msa0619180:three_prime_UTR | 20.0% |
| !!! | ATTATTATTCCTTTTGGTTT+CGG | - | chr4_2:70245448-70245467 | Msa0619180:three_prime_UTR | 20.0% |
| !! | AAATAACATTCAACAGAATT+TGG | + | chr4_2:70245972-70245991 | None:intergenic | 20.0% |
| !! | TTATTTAATATGCTCATACT+TGG | - | chr4_2:70246674-70246693 | Msa0619180:intron | 20.0% |
| !! | AATATCAGAAACAAAATGTA+AGG | + | chr4_2:70246743-70246762 | None:intergenic | 20.0% |
| !! | ATTATGCAATAGATAAAAAC+GGG | - | chr4_2:70247566-70247585 | Msa0619180:intron | 20.0% |
| !! | TATATAGAAGCAGAAAATAA+GGG | + | chr4_2:70248003-70248022 | None:intergenic | 20.0% |
| !! | ATATATAGAAGCAGAAAATA+AGG | + | chr4_2:70248004-70248023 | None:intergenic | 20.0% |
| !! | CGATTATATCAAATTAATAC+CGG | + | chr4_2:70248081-70248100 | None:intergenic | 20.0% |
| !! | ATTGATTGATTGTACATATA+TGG | - | chr4_2:70248538-70248557 | Msa0619180:intron | 20.0% |
| !! | TGTTTATTTCAAACAAAGTT+GGG | + | chr4_2:70248822-70248841 | None:intergenic | 20.0% |
| !! | ATGTTTATTTCAAACAAAGT+TGG | + | chr4_2:70248823-70248842 | None:intergenic | 20.0% |
| !!! | TTTTTACTAAAGTGGTTTTA+AGG | - | chr4_2:70249185-70249204 | Msa0619180:intron | 20.0% |
| !!! | TTTTAATCTCTATAATCGTT+TGG | + | chr4_2:70249303-70249322 | None:intergenic | 20.0% |
| !! | TAATAGTCAAACAGAATAAT+AGG | + | chr4_2:70249553-70249572 | None:intergenic | 20.0% |
| !! | ATCTTTACATGTATTTGTAT+GGG | - | chr4_2:70249811-70249830 | Msa0619180:intron | 20.0% |
| !!! | AATATTTTTTTACGCAAGTT+TGG | + | chr4_2:70250210-70250229 | None:intergenic | 20.0% |
| !!! | TATTTTGATTGTTATCATCT+AGG | + | chr4_2:70250649-70250668 | None:intergenic | 20.0% |
| ! | GAGAAATGAAAGAAAAAGAA+TGG | + | chr4_2:70245355-70245374 | None:intergenic | 25.0% |
| ! | TGTTCTTATAACAATATTCC+AGG | - | chr4_2:70245707-70245726 | Msa0619180:three_prime_UTR | 25.0% |
| ! | CTACACTTTCAAAAACAAAA+GGG | + | chr4_2:70245820-70245839 | None:intergenic | 25.0% |
| ! | ACTACACTTTCAAAAACAAA+AGG | + | chr4_2:70245821-70245840 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTATTTAAAGCG+AGG | - | chr4_2:70245843-70245862 | Msa0619180:CDS | 25.0% |
| ! | TTGCATATTAATCACGTTAT+AGG | + | chr4_2:70246000-70246019 | None:intergenic | 25.0% |
| ! | ATAACGTGATTAATATGCAA+AGG | - | chr4_2:70246000-70246019 | Msa0619180:intron | 25.0% |
| ! | TAACGTGATTAATATGCAAA+GGG | - | chr4_2:70246001-70246020 | Msa0619180:intron | 25.0% |
| ! | TTAAAGAGCTTATTGGATTA+AGG | + | chr4_2:70246269-70246288 | None:intergenic | 25.0% |
| ! | AGTTATCTTAAAGAGCTTAT+TGG | + | chr4_2:70246276-70246295 | None:intergenic | 25.0% |
| !!! | AAGCTCTTTAAGATAACTTT+TGG | - | chr4_2:70246278-70246297 | Msa0619180:intron | 25.0% |
| ! | GTGATAGAAAATATATTCTC+AGG | + | chr4_2:70246510-70246529 | None:intergenic | 25.0% |
| ! | AAAATGTAAGGATCCAAAAT+GGG | + | chr4_2:70246731-70246750 | None:intergenic | 25.0% |
| !!! | TGGTTTTGCTTAAAAAATGA+AGG | + | chr4_2:70246901-70246920 | None:intergenic | 25.0% |
| !!! | TATTGGTTCAAGTAAGAAAA+TGG | + | chr4_2:70246978-70246997 | None:intergenic | 25.0% |
| !! | GATCTATTCTGCAATTTTAT+TGG | + | chr4_2:70246995-70247014 | None:intergenic | 25.0% |
| ! | CAATACAAGTATGATTACTT+TGG | - | chr4_2:70247102-70247121 | Msa0619180:CDS | 25.0% |
| !! | TTAGCTATTCATTTTGTGAT+TGG | - | chr4_2:70247206-70247225 | Msa0619180:intron | 25.0% |
| ! | ATCAAATGTACCATTTGAAT+AGG | - | chr4_2:70247326-70247345 | Msa0619180:intron | 25.0% |
| ! | TTCTTTATTGCCTATTCAAA+TGG | + | chr4_2:70247339-70247358 | None:intergenic | 25.0% |
| ! | TTCTTTATTGCCTATTCAAA+TGG | + | chr4_2:70247339-70247358 | None:intergenic | 25.0% |
| ! | TTATGCAATAGATAAAAACG+GGG | - | chr4_2:70247567-70247586 | Msa0619180:intron | 25.0% |
| !! | AAAACAGTTACTTTGATTCA+TGG | - | chr4_2:70247685-70247704 | Msa0619180:intron | 25.0% |
| !! | TTATAGTGATACATTGATTG+AGG | - | chr4_2:70247798-70247817 | Msa0619180:intron | 25.0% |
| ! | TGGGATGTAATTAAAGAAAT+AGG | + | chr4_2:70247977-70247996 | None:intergenic | 25.0% |
| ! | TGTACAATCAATCAATATAG+AGG | + | chr4_2:70248534-70248553 | None:intergenic | 25.0% |
| ! | ATAGTTTACATTTATAGTCG+AGG | - | chr4_2:70248738-70248757 | Msa0619180:intron | 25.0% |
| ! | TTTATTTCAAACAAAGTTGG+GGG | + | chr4_2:70248820-70248839 | None:intergenic | 25.0% |
| ! | GTTTATTTCAAACAAAGTTG+GGG | + | chr4_2:70248821-70248840 | None:intergenic | 25.0% |
| !!! | TCTTAAAACCTTTTTAAGAG+AGG | + | chr4_2:70248877-70248896 | None:intergenic | 25.0% |
| ! | TTGTTAAATAACAGCTATAG+CGG | - | chr4_2:70248945-70248964 | Msa0619180:CDS | 25.0% |
| !! | TGTCTTTTTATCTTTTAGCA+GGG | + | chr4_2:70249105-70249124 | None:intergenic | 25.0% |
| !! | ATGTCTTTTTATCTTTTAGC+AGG | + | chr4_2:70249106-70249125 | None:intergenic | 25.0% |
| !! | GATGACAATTTTTACTAAAG+TGG | - | chr4_2:70249177-70249196 | Msa0619180:intron | 25.0% |
| !!! | ACTGATTTGAACCATATTAA+TGG | + | chr4_2:70249218-70249237 | None:intergenic | 25.0% |
| !! | TTGTAACAAGCTTTTATTGT+AGG | + | chr4_2:70249443-70249462 | None:intergenic | 25.0% |
| !!! | TACAATAAAAGCTTGTTACA+AGG | - | chr4_2:70249442-70249461 | Msa0619180:intron | 25.0% |
| ! | TAAGATATTGTGAATTGTTC+CGG | - | chr4_2:70249579-70249598 | Msa0619180:intron | 25.0% |
| ! | TACAAATACATGTAAAGATG+AGG | + | chr4_2:70249810-70249829 | None:intergenic | 25.0% |
| ! | CATCTTTACATGTATTTGTA+TGG | - | chr4_2:70249810-70249829 | Msa0619180:intron | 25.0% |
| ! | GTGTCAAAGCATATTATTAA+GGG | - | chr4_2:70250010-70250029 | Msa0619180:CDS | 25.0% |
| !!! | ACAAGATCACTCTTTTTTAT+TGG | + | chr4_2:70250570-70250589 | None:intergenic | 25.0% |
| ! | ACAAATTGAAATGGAGTTAA+AGG | + | chr4_2:70250794-70250813 | None:intergenic | 25.0% |
| !!! | CATTTCAATTTGTTAGCTTT+GGG | - | chr4_2:70250801-70250820 | Msa0619180:intron | 25.0% |
| ! | AAGAATTATTAGATTCGCAT+CGG | + | chr4_2:70250876-70250895 | None:intergenic | 25.0% |
| !!! | TTTTTGCTGTAAATTGAGTT+CGG | - | chr4_2:70251269-70251288 | Msa0619180:intron | 25.0% |
| !! | ACTCTATCTTCTTCTATTTT+GGG | - | chr4_2:70251348-70251367 | Msa0619180:intron | 25.0% |
| AATCTAATTGGAATGGATGA+AGG | + | chr4_2:70245321-70245340 | None:intergenic | 30.0% | |
| GAAGCAAAATCTAATTGGAA+TGG | + | chr4_2:70245328-70245347 | None:intergenic | 30.0% | |
| ATGAAAGAAAAAGAATGGAG+TGG | + | chr4_2:70245350-70245369 | None:intergenic | 30.0% | |
| ATTTCTCAAACAAATCTACC+AGG | - | chr4_2:70245368-70245387 | Msa0619180:three_prime_UTR | 30.0% | |
| !!! | TTCCATTCCTTATTTTATCG+AGG | - | chr4_2:70245472-70245491 | Msa0619180:three_prime_UTR | 30.0% |
| ATCCTCGATAAAATAAGGAA+TGG | + | chr4_2:70245477-70245496 | None:intergenic | 30.0% | |
| TAACGATCCTCGATAAAATA+AGG | + | chr4_2:70245482-70245501 | None:intergenic | 30.0% | |
| TGTTTAATTATAGCAGAACC+TGG | + | chr4_2:70245728-70245747 | None:intergenic | 30.0% | |
| CTGTGAACAGTGTAATTAAT+TGG | + | chr4_2:70245769-70245788 | None:intergenic | 30.0% | |
| TTAATTACACTGTTCACAGT+TGG | - | chr4_2:70245770-70245789 | Msa0619180:intron | 30.0% | |
| !!! | AAAGCGAGGTTTTGTTTTTT+TGG | - | chr4_2:70245857-70245876 | Msa0619180:CDS | 30.0% |
| TAAGCAAATTTGTAGATGCT+AGG | - | chr4_2:70245885-70245904 | Msa0619180:intron | 30.0% | |
| !! | ACTCTATGATTTTGATCTCA+TGG | + | chr4_2:70245916-70245935 | None:intergenic | 30.0% |
| AACATTCAACAGAATTTGGA+AGG | + | chr4_2:70245968-70245987 | None:intergenic | 30.0% | |
| TTGAATATAATCGCATGTGT+CGG | + | chr4_2:70246153-70246172 | None:intergenic | 30.0% | |
| TGACATCAACACTAATTAGA+AGG | + | chr4_2:70246193-70246212 | None:intergenic | 30.0% | |
| ! | GGTAAAAGCTAGCTTAATAT+TGG | + | chr4_2:70246555-70246574 | None:intergenic | 30.0% |
| !!! | ATTAAGCTAGCTTTTACCAT+TGG | - | chr4_2:70246557-70246576 | Msa0619180:intron | 30.0% |
| ! | ACACTTTTCCTTGAAATATG+CGG | + | chr4_2:70246639-70246658 | None:intergenic | 30.0% |
| ! | AAAATAAGTGCTTCCCATTT+TGG | - | chr4_2:70246715-70246734 | Msa0619180:intron | 30.0% |
| CAAAATGTAAGGATCCAAAA+TGG | + | chr4_2:70246732-70246751 | None:intergenic | 30.0% | |
| CTGATATTACTATCTGTTGA+TGG | + | chr4_2:70246921-70246940 | None:intergenic | 30.0% | |
| ATACTTTCAAATTGACATGC+AGG | - | chr4_2:70247133-70247152 | Msa0619180:intron | 30.0% | |
| AATTTCTTGTCTTTGTTCAC+AGG | - | chr4_2:70247241-70247260 | Msa0619180:intron | 30.0% | |
| ATTTCTTGTCTTTGTTCACA+GGG | - | chr4_2:70247242-70247261 | Msa0619180:intron | 30.0% | |
| ! | GCTACACAATTTACATGTTT+TGG | + | chr4_2:70247280-70247299 | None:intergenic | 30.0% |
| ACTTGAATATGAACACTAGT+TGG | + | chr4_2:70247518-70247537 | None:intergenic | 30.0% | |
| TATGCAATAGATAAAAACGG+GGG | - | chr4_2:70247568-70247587 | Msa0619180:intron | 30.0% | |
| ! | CAAAGTAACTGTTTTGCAAT+AGG | + | chr4_2:70247680-70247699 | None:intergenic | 30.0% |
| AATCAGCAAGACTTGTAATA+TGG | + | chr4_2:70247711-70247730 | None:intergenic | 30.0% | |
| TTGATTCATGGCCATATTAT+AGG | - | chr4_2:70247740-70247759 | Msa0619180:intron | 30.0% | |
| AATCAGCAAGACCTATAATA+TGG | + | chr4_2:70247754-70247773 | None:intergenic | 30.0% | |
| !! | AAGCAGAAAATAAGGGTATT+GGG | + | chr4_2:70247996-70248015 | None:intergenic | 30.0% |
| ATATATTATAAGCTGCTCCA+AGG | - | chr4_2:70248018-70248037 | Msa0619180:intron | 30.0% | |
| TTCTACATACCAATTCATGA+TGG | - | chr4_2:70248254-70248273 | Msa0619180:intron | 30.0% | |
| AACAAAAGATCCGTAAATGT+GGG | + | chr4_2:70248418-70248437 | None:intergenic | 30.0% | |
| GAATATTTCTTCAACCAGTT+AGG | - | chr4_2:70248447-70248466 | Msa0619180:intron | 30.0% | |
| GATTGATTGTACATATATGG+TGG | - | chr4_2:70248541-70248560 | Msa0619180:intron | 30.0% | |
| CTCTCATATTGTTAAAGTAG+AGG | + | chr4_2:70248609-70248628 | None:intergenic | 30.0% | |
| ! | CATTTGCTTTCTTGTTATGT+TGG | - | chr4_2:70248769-70248788 | Msa0619180:intron | 30.0% |
| !! | TAAAACCTTTTTAAGAGAGG+AGG | + | chr4_2:70248874-70248893 | None:intergenic | 30.0% |
| AGAAATAATTAGGTGCTTAC+TGG | - | chr4_2:70248894-70248913 | Msa0619180:intron | 30.0% | |
| ! | TTATCAATTAGGTGCTATAG+TGG | - | chr4_2:70249013-70249032 | Msa0619180:intron | 30.0% |
| !! | AAGGTACTGAACCATTAATA+TGG | - | chr4_2:70249204-70249223 | Msa0619180:intron | 30.0% |
| CAGTTAATATGCTTCAATTC+AGG | + | chr4_2:70249364-70249383 | None:intergenic | 30.0% | |
| CAAACAGAATAATAGGAGTT+AGG | + | chr4_2:70249546-70249565 | None:intergenic | 30.0% | |
| AATGACAAGTTTATGCATCA+GGG | + | chr4_2:70249682-70249701 | None:intergenic | 30.0% | |
| AAATGACAAGTTTATGCATC+AGG | + | chr4_2:70249683-70249702 | None:intergenic | 30.0% | |
| ! | CATAAACTTGTCATTTCTAC+AGG | - | chr4_2:70249687-70249706 | Msa0619180:intron | 30.0% |
| TACATGTATTTGTATGGGAA+TGG | - | chr4_2:70249816-70249835 | Msa0619180:intron | 30.0% | |
| CGTGTCAAAGCATATTATTA+AGG | - | chr4_2:70250009-70250028 | Msa0619180:CDS | 30.0% | |
| ! | AAGTTTGGTGACCAAAATTA+TGG | + | chr4_2:70250195-70250214 | None:intergenic | 30.0% |
| !!! | CTGTTTTTTCTTACAGAATC+TGG | + | chr4_2:70250401-70250420 | None:intergenic | 30.0% |
| CAGATTCTGTAAGAAAAAAC+AGG | - | chr4_2:70250399-70250418 | Msa0619180:intron | 30.0% | |
| CGACAATGTAAATACATACA+AGG | + | chr4_2:70250431-70250450 | None:intergenic | 30.0% | |
| TGTATGTATTTACATTGTCG+TGG | - | chr4_2:70250431-70250450 | Msa0619180:intron | 30.0% | |
| ! | ACTAATTGATTCAGAACACT+AGG | + | chr4_2:70250484-70250503 | None:intergenic | 30.0% |
| !!! | TCACTCTTTTTTATTGGAGA+AGG | + | chr4_2:70250564-70250583 | None:intergenic | 30.0% |
| CCAAAGCTAACAAATTGAAA+TGG | + | chr4_2:70250803-70250822 | None:intergenic | 30.0% | |
| !! | CCATTTCAATTTGTTAGCTT+TGG | - | chr4_2:70250800-70250819 | Msa0619180:intron | 30.0% |
| ATAATTCTTCTGTATCTTGC+AGG | - | chr4_2:70250887-70250906 | Msa0619180:intron | 30.0% | |
| ! | GCAAATTGGCAACTTTTTAA+AGG | - | chr4_2:70250917-70250936 | Msa0619180:intron | 30.0% |
| !! | AACTTTTTAAAGGCAGAAGA+TGG | - | chr4_2:70250927-70250946 | Msa0619180:intron | 30.0% |
| GAAATTCAAACTGTTGCTAT+TGG | + | chr4_2:70251147-70251166 | None:intergenic | 30.0% | |
| TAGCAACAGTTTGAATTTCT+AGG | - | chr4_2:70251148-70251167 | Msa0619180:CDS | 30.0% | |
| TACAACATACAATCTCTTAC+AGG | + | chr4_2:70251321-70251340 | None:intergenic | 30.0% | |
| ! | CACTCTATCTTCTTCTATTT+TGG | - | chr4_2:70251347-70251366 | Msa0619180:intron | 30.0% |
| GAGTGGAAGCAAAATCTAAT+TGG | + | chr4_2:70245333-70245352 | None:intergenic | 35.0% | |
| TTATCGAGGATCGTTAATTG+AGG | - | chr4_2:70245486-70245505 | Msa0619180:three_prime_UTR | 35.0% | |
| TTAGCATCCATTACATACAG+CGG | + | chr4_2:70245548-70245567 | None:intergenic | 35.0% | |
| TGTTCAAATGTTGCATCTAC+CGG | - | chr4_2:70245571-70245590 | Msa0619180:three_prime_UTR | 35.0% | |
| GTTATTCTCACACAATTCTC+GGG | + | chr4_2:70245608-70245627 | None:intergenic | 35.0% | |
| CGTTATTCTCACACAATTCT+CGG | + | chr4_2:70245609-70245628 | None:intergenic | 35.0% | |
| CGAGAATTGTGTGAGAATAA+CGG | - | chr4_2:70245607-70245626 | Msa0619180:three_prime_UTR | 35.0% | |
| GAGAATTGTGTGAGAATAAC+GGG | - | chr4_2:70245608-70245627 | Msa0619180:three_prime_UTR | 35.0% | |
| !!! | CTGAAGCTTTTTCAGTTTAC+CGG | + | chr4_2:70245651-70245670 | None:intergenic | 35.0% |
| TGAAAAAGCTTCAGACGATT+CGG | - | chr4_2:70245657-70245676 | Msa0619180:three_prime_UTR | 35.0% | |
| GTGATTAATATGCAAAGGGA+GGG | - | chr4_2:70246005-70246024 | Msa0619180:intron | 35.0% | |
| ! | ATGACTATTAGGGGAGTTTT+GGG | + | chr4_2:70246475-70246494 | None:intergenic | 35.0% |
| ! | TATGACTATTAGGGGAGTTT+TGG | + | chr4_2:70246476-70246495 | None:intergenic | 35.0% |
| AATGCTATTCAAGCATCCAA+TGG | + | chr4_2:70246576-70246595 | None:intergenic | 35.0% | |
| GCTTGAATAGCATTTACTTC+TGG | - | chr4_2:70246582-70246601 | Msa0619180:intron | 35.0% | |
| GGAATTTACCGCATATTTCA+AGG | - | chr4_2:70246628-70246647 | Msa0619180:intron | 35.0% | |
| GCATATTTCAAGGAAAAGTG+TGG | - | chr4_2:70246638-70246657 | Msa0619180:intron | 35.0% | |
| !!! | TGGGAAGCACTTATTTTAGT+AGG | + | chr4_2:70246712-70246731 | None:intergenic | 35.0% |
| TACTCTTGTAGCTTCAACAT+TGG | - | chr4_2:70246762-70246781 | Msa0619180:intron | 35.0% | |
| AGATTCTGCCGTATTTAAGT+GGG | - | chr4_2:70247020-70247039 | Msa0619180:intron | 35.0% | |
| ATGTTGTTGGTCAGTTTCTT+TGG | - | chr4_2:70247053-70247072 | Msa0619180:intron | 35.0% | |
| ATCATACTTGTATTGCATGC+CGG | + | chr4_2:70247097-70247116 | None:intergenic | 35.0% | |
| AAATTGACATGCAGGAATGA+TGG | - | chr4_2:70247141-70247160 | Msa0619180:intron | 35.0% | |
| AATTGACATGCAGGAATGAT+GGG | - | chr4_2:70247142-70247161 | Msa0619180:intron | 35.0% | |
| GCCAAATGTACCATTTGAAT+AGG | - | chr4_2:70247426-70247445 | Msa0619180:intron | 35.0% | |
| GCCTATTCAAATGGTACATT+TGG | + | chr4_2:70247330-70247349 | None:intergenic | 35.0% | |
| ATGCAATAGATAAAAACGGG+GGG | - | chr4_2:70247569-70247588 | Msa0619180:intron | 35.0% | |
| ! | TGATACATTGATTGAGGAAG+AGG | - | chr4_2:70247804-70247823 | Msa0619180:intron | 35.0% |
| GCTGATATATTCAAGCTCTA+TGG | - | chr4_2:70247844-70247863 | Msa0619180:intron | 35.0% | |
| ! | GAAGCAGAAAATAAGGGTAT+TGG | + | chr4_2:70247997-70248016 | None:intergenic | 35.0% |
| GCTGAAATACCAATTCATGT+TGG | - | chr4_2:70248208-70248227 | Msa0619180:intron | 35.0% | |
| ! | TGTAGAGTACCAACATGAAT+TGG | + | chr4_2:70248220-70248239 | None:intergenic | 35.0% |
| TGGTACTCTACAATTAACAG+TGG | - | chr4_2:70248228-70248247 | Msa0619180:intron | 35.0% | |
| TGTCAAGTACCATCATGAAT+TGG | + | chr4_2:70248266-70248285 | None:intergenic | 35.0% | |
| CAACAAAAGATCCGTAAATG+TGG | + | chr4_2:70248419-70248438 | None:intergenic | 35.0% | |
| TTACTTGCAGAAATCCTAAC+TGG | + | chr4_2:70248464-70248483 | None:intergenic | 35.0% | |
| ! | TAGTTTGTAGAGACAGCAAA+TGG | - | chr4_2:70248491-70248510 | Msa0619180:intron | 35.0% |
| AGTTTGTAGAGACAGCAAAT+GGG | - | chr4_2:70248492-70248511 | Msa0619180:intron | 35.0% | |
| TTTCATATGATCGTATCAGC+TGG | - | chr4_2:70248706-70248725 | Msa0619180:intron | 35.0% | |
| TTCATATGATCGTATCAGCT+GGG | - | chr4_2:70248707-70248726 | Msa0619180:intron | 35.0% | |
| TTACATTTATAGTCGAGGTC+TGG | - | chr4_2:70248743-70248762 | Msa0619180:intron | 35.0% | |
| !!! | GTTATGTTGGCTTCTAGTTT+TGG | - | chr4_2:70248782-70248801 | Msa0619180:intron | 35.0% |
| !!! | AGAGAGGAGGATTTGTTTTA+GGG | + | chr4_2:70248861-70248880 | None:intergenic | 35.0% |
| !! | AAGAGAGGAGGATTTGTTTT+AGG | + | chr4_2:70248862-70248881 | None:intergenic | 35.0% |
| CAAATCCTCCTCTCTTAAAA+AGG | - | chr4_2:70248866-70248885 | Msa0619180:intron | 35.0% | |
| ! | AAAGCAACATGTCTTTTAGC+AGG | - | chr4_2:70249320-70249339 | Msa0619180:intron | 35.0% |
| ! | AAGCAACATGTCTTTTAGCA+GGG | - | chr4_2:70249321-70249340 | Msa0619180:intron | 35.0% |
| AACAGCATAATGTCTGATGA+TGG | - | chr4_2:70249492-70249511 | Msa0619180:intron | 35.0% | |
| TTGTTTACCATTTCAGACTG+AGG | - | chr4_2:70249641-70249660 | Msa0619180:intron | 35.0% | |
| ! | AAACTTGTCATTTCTACAGG+TGG | - | chr4_2:70249690-70249709 | Msa0619180:intron | 35.0% |
| !! | ATTCGGTGTAATCAATGCAT+TGG | + | chr4_2:70250120-70250139 | None:intergenic | 35.0% |
| !! | TCTGATCTTTTTGAAGAGAG+AGG | - | chr4_2:70250284-70250303 | Msa0619180:intron | 35.0% |
| TTCTAATGAGACTCTAGCAT+TGG | + | chr4_2:70250327-70250346 | None:intergenic | 35.0% | |
| ! | CTAGGAAGCATATAACATGA+AGG | + | chr4_2:70250631-70250650 | None:intergenic | 35.0% |
| TGCAGATATAGCAACAAAAC+TGG | - | chr4_2:70250697-70250716 | Msa0619180:intron | 35.0% | |
| GCAGATATAGCAACAAAACT+GGG | - | chr4_2:70250698-70250717 | Msa0619180:intron | 35.0% | |
| ! | ACAAATCAGACGCATCTTTT+CGG | + | chr4_2:70250724-70250743 | None:intergenic | 35.0% |
| TCCAACTGAAATTGCAATTG+AGG | - | chr4_2:70250745-70250764 | Msa0619180:intron | 35.0% | |
| ACCTCAATTGCAATTTCAGT+TGG | + | chr4_2:70250749-70250768 | None:intergenic | 35.0% | |
| !! | TTTTTAAAGGCAGAAGATGG+TGG | - | chr4_2:70250930-70250949 | Msa0619180:intron | 35.0% |
| CAATTTGCGGTTTGCAATTA+AGG | - | chr4_2:70251016-70251035 | Msa0619180:intron | 35.0% | |
| CTATACGAAAGATCCATCTA+CGG | - | chr4_2:70251420-70251439 | Msa0619180:five_prime_UTR | 35.0% | |
| AAAGAGATACTGAACTGACC+TGG | + | chr4_2:70245389-70245408 | None:intergenic | 40.0% | |
| GAATGGAAACCGAAACCAAA+AGG | + | chr4_2:70245460-70245479 | None:intergenic | 40.0% | |
| TGTATTGCCGCTGTATGTAA+TGG | - | chr4_2:70245538-70245557 | Msa0619180:three_prime_UTR | 40.0% | |
| !! | TAACGGGTTGTTCTTTGAGT+CGG | - | chr4_2:70245624-70245643 | Msa0619180:three_prime_UTR | 40.0% |
| CGTGATTAATATGCAAAGGG+AGG | - | chr4_2:70246004-70246023 | Msa0619180:intron | 40.0% | |
| !! | CAAAGGGAGGGTATTTAGAA+TGG | - | chr4_2:70246017-70246036 | Msa0619180:intron | 40.0% |
| ! | ACTTTGGATCAGAAGTGTGT+CGG | + | chr4_2:70246095-70246114 | None:intergenic | 40.0% |
| TTCTGATCCAAAGTGTGTTC+AGG | - | chr4_2:70246101-70246120 | Msa0619180:intron | 40.0% | |
| CAATAGAACGTAACAGTGGA+TGG | + | chr4_2:70246310-70246329 | None:intergenic | 40.0% | |
| GCTACAATAGAACGTAACAG+TGG | + | chr4_2:70246314-70246333 | None:intergenic | 40.0% | |
| ATCCAATCACAAGTAGCTCA+TGG | - | chr4_2:70246380-70246399 | Msa0619180:intron | 40.0% | |
| TTCCATGAGCTACTTGTGAT+TGG | + | chr4_2:70246385-70246404 | None:intergenic | 40.0% | |
| CAAGCTGGTATGACTATTAG+GGG | + | chr4_2:70246484-70246503 | None:intergenic | 40.0% | |
| CCAAGCTGGTATGACTATTA+GGG | + | chr4_2:70246485-70246504 | None:intergenic | 40.0% | |
| GTAGCTTCAACATTGGAATC+TGG | - | chr4_2:70246769-70246788 | Msa0619180:intron | 40.0% | |
| CTTCAACATTGGAATCTGGA+GGG | - | chr4_2:70246773-70246792 | Msa0619180:intron | 40.0% | |
| CAGATTCTGCCGTATTTAAG+TGG | - | chr4_2:70247019-70247038 | Msa0619180:intron | 40.0% | |
| ATACAGCGCCCACTTAAATA+CGG | + | chr4_2:70247031-70247050 | None:intergenic | 40.0% | |
| TCATACTTGTATTGCATGCC+GGG | + | chr4_2:70247096-70247115 | None:intergenic | 40.0% | |
| AATAGATAAAAACGGGGGGA+GGG | - | chr4_2:70247573-70247592 | Msa0619180:intron | 40.0% | |
| AAAACTAGAGCAAAATCCCC+AGG | + | chr4_2:70247609-70247628 | None:intergenic | 40.0% | |
| ! | TGTTTTGCAATAGGCAGATG+TGG | + | chr4_2:70247671-70247690 | None:intergenic | 40.0% |
| TTGATTGAGGAAGAGGTTGA+TGG | - | chr4_2:70247811-70247830 | Msa0619180:intron | 40.0% | |
| AGAATCTTTCTTTCGCGAGA+AGG | - | chr4_2:70247867-70247886 | Msa0619180:intron | 40.0% | |
| AAAGATCCGTAAATGTGGGA+CGG | + | chr4_2:70248414-70248433 | None:intergenic | 40.0% | |
| TAGTAACAAGCTGGTAAGAG+GGG | + | chr4_2:70248574-70248593 | None:intergenic | 40.0% | |
| CTAGTAACAAGCTGGTAAGA+GGG | + | chr4_2:70248575-70248594 | None:intergenic | 40.0% | |
| CAAACCTGTAAAGTTGGACA+GGG | + | chr4_2:70248671-70248690 | None:intergenic | 40.0% | |
| TGTTGCCAAACCTGTAAAGT+TGG | + | chr4_2:70248677-70248696 | None:intergenic | 40.0% | |
| TTGTGTGTGATTAGTGACCA+GGG | - | chr4_2:70249064-70249083 | Msa0619180:intron | 40.0% | |
| ! | AGCAACATGTCTTTTAGCAG+GGG | - | chr4_2:70249322-70249341 | Msa0619180:intron | 40.0% |
| !! | ATGTCTGATGATGGCATGTA+CGG | - | chr4_2:70249501-70249520 | Msa0619180:intron | 40.0% |
| TTCAATGCCTCAGTCTGAAA+TGG | + | chr4_2:70249651-70249670 | None:intergenic | 40.0% | |
| TGCCAGGAAATATATGCACA+AGG | - | chr4_2:70249841-70249860 | Msa0619180:intron | 40.0% | |
| GCCAGGAAATATATGCACAA+GGG | - | chr4_2:70249842-70249861 | Msa0619180:intron | 40.0% | |
| CCAGGAAATATATGCACAAG+GGG | - | chr4_2:70249843-70249862 | Msa0619180:intron | 40.0% | |
| CAGGAAATATATGCACAAGG+GGG | - | chr4_2:70249844-70249863 | Msa0619180:intron | 40.0% | |
| TGTTTGGTTAGATGTACCAG+TGG | - | chr4_2:70249871-70249890 | Msa0619180:intron | 40.0% | |
| ACCAGTTGTAATTCACATGC+AGG | - | chr4_2:70250247-70250266 | Msa0619180:intron | 40.0% | |
| ! | GAAATGGAGTTAAAGGCATG+AGG | + | chr4_2:70250787-70250806 | None:intergenic | 40.0% |
| !! | TTTGTTAGCTTTGGGCAAAC+TGG | - | chr4_2:70250809-70250828 | Msa0619180:intron | 40.0% |
| TGGGCAAACTGGAATATTCA+CGG | - | chr4_2:70250820-70250839 | Msa0619180:intron | 40.0% | |
| TGCAAGATAGTAGTGCGATT+TGG | - | chr4_2:70250956-70250975 | Msa0619180:intron | 40.0% | |
| !! | TTCTATTTTGGGTCTCCCAT+GGG | - | chr4_2:70251359-70251378 | Msa0619180:intron | 40.0% |
| ACTAATGTGTGTTCCGTAGA+TGG | + | chr4_2:70251436-70251455 | None:intergenic | 40.0% | |
| CACAGTGCAAACTGAAACGA+AGG | + | chr4_2:70245520-70245539 | None:intergenic | 45.0% | |
| TTCTCACACAATTCTCGGGT+CGG | + | chr4_2:70245604-70245623 | None:intergenic | 45.0% | |
| TCGGTGCAAGAAGGTTTCTA+CGG | - | chr4_2:70245676-70245695 | Msa0619180:three_prime_UTR | 45.0% | |
| !! | TCAGAAGTGTGTCGGTGTTA+CGG | + | chr4_2:70246087-70246106 | None:intergenic | 45.0% |
| GTCAACACCTGAACACACTT+TGG | + | chr4_2:70246111-70246130 | None:intergenic | 45.0% | |
| !! | TGTGTTCAGGTGTTGACATG+TGG | - | chr4_2:70246114-70246133 | Msa0619180:intron | 45.0% |
| CCCTAATAGTCATACCAGCT+TGG | - | chr4_2:70246482-70246501 | Msa0619180:CDS | 45.0% | |
| GCCAAGCTGGTATGACTATT+AGG | + | chr4_2:70246486-70246505 | None:intergenic | 45.0% | |
| TATATTCTCAGGTGCCAAGC+TGG | + | chr4_2:70246499-70246518 | None:intergenic | 45.0% | |
| GCTTCAACATTGGAATCTGG+AGG | - | chr4_2:70246772-70246791 | Msa0619180:intron | 45.0% | |
| AGAACCAACTCTTCCTCAAG+GGG | + | chr4_2:70246808-70246827 | None:intergenic | 45.0% | |
| CAGAACCAACTCTTCCTCAA+GGG | + | chr4_2:70246809-70246828 | None:intergenic | 45.0% | |
| TCAGAACCAACTCTTCCTCA+AGG | + | chr4_2:70246810-70246829 | None:intergenic | 45.0% | |
| !! | TGAGGAAGAGTTGGTTCTGA+AGG | - | chr4_2:70246810-70246829 | Msa0619180:intron | 45.0% |
| ! | GGGCGCTGTATATATGTTGT+TGG | - | chr4_2:70247040-70247059 | Msa0619180:intron | 45.0% |
| GTTGATGTCTCGTGATTACC+CGG | - | chr4_2:70247075-70247094 | Msa0619180:CDS | 45.0% | |
| CAATAGATAAAAACGGGGGG+AGG | - | chr4_2:70247572-70247591 | Msa0619180:intron | 45.0% | |
| ATAGATAAAAACGGGGGGAG+GGG | - | chr4_2:70247574-70247593 | Msa0619180:intron | 45.0% | |
| ATCTTTCTTTCGCGAGAAGG+AGG | - | chr4_2:70247870-70247889 | Msa0619180:intron | 45.0% | |
| TATAAGCTGCTCCAAGGAGA+CGG | - | chr4_2:70248024-70248043 | Msa0619180:intron | 45.0% | |
| ATATTGATCTCCCGTCTCCT+TGG | + | chr4_2:70248038-70248057 | None:intergenic | 45.0% | |
| TTGACACTTAGCAGTGTCAC+AGG | - | chr4_2:70248280-70248299 | Msa0619180:intron | 45.0% | |
| ! | AGTTCCTTTTACCGAGTCAG+TGG | - | chr4_2:70248383-70248402 | Msa0619180:intron | 45.0% |
| !! | CATTCCACTGACTCGGTAAA+AGG | + | chr4_2:70248390-70248409 | None:intergenic | 45.0% |
| GAATGTCCGTCCCACATTTA+CGG | - | chr4_2:70248405-70248424 | Msa0619180:intron | 45.0% | |
| AGTAACAAGCTGGTAAGAGG+GGG | + | chr4_2:70248573-70248592 | None:intergenic | 45.0% | |
| CCTAGTAACAAGCTGGTAAG+AGG | + | chr4_2:70248576-70248595 | None:intergenic | 45.0% | |
| !! | CCTCTTACCAGCTTGTTACT+AGG | - | chr4_2:70248573-70248592 | Msa0619180:intron | 45.0% |
| TGTGACATGGGTGAACAAAC+AGG | + | chr4_2:70248632-70248651 | None:intergenic | 45.0% | |
| TTGTTCACCCATGTCACAGA+TGG | - | chr4_2:70248634-70248653 | Msa0619180:intron | 45.0% | |
| CCAAACCTGTAAAGTTGGAC+AGG | + | chr4_2:70248672-70248691 | None:intergenic | 45.0% | |
| CCTGTCCAACTTTACAGGTT+TGG | - | chr4_2:70248669-70248688 | Msa0619180:intron | 45.0% | |
| CATTTATAGTCGAGGTCTGG+AGG | - | chr4_2:70248746-70248765 | Msa0619180:intron | 45.0% | |
| GTTGTGTGTGATTAGTGACC+AGG | - | chr4_2:70249063-70249082 | Msa0619180:intron | 45.0% | |
| ! | ATCTTTTAGCAGGGAGTCCA+TGG | + | chr4_2:70249096-70249115 | None:intergenic | 45.0% |
| ! | TCTTTTAGCAGGGGAGTTCA+TGG | - | chr4_2:70249331-70249350 | Msa0619180:intron | 45.0% |
| TGACTGTGTGACAGAACCAT+AGG | + | chr4_2:70249609-70249628 | None:intergenic | 45.0% | |
| ! | CTTGTCATTTCTACAGGTGG+AGG | - | chr4_2:70249693-70249712 | Msa0619180:intron | 45.0% |
| CTGTTGTGCGGCCTATTAAT+TGG | - | chr4_2:70249718-70249737 | Msa0619180:intron | 45.0% | |
| !! | TTGTATGGGAATGGATTGCC+AGG | - | chr4_2:70249825-70249844 | Msa0619180:intron | 45.0% |
| CCCCTTGTGCATATATTTCC+TGG | + | chr4_2:70249846-70249865 | None:intergenic | 45.0% | |
| ! | AGATGTACCAGTGGAAGCAT+TGG | - | chr4_2:70249880-70249899 | Msa0619180:intron | 45.0% |
| CTGCTTCATCGTGTAGAAGA+GGG | + | chr4_2:70249940-70249959 | None:intergenic | 45.0% | |
| GCCTGCATGTGAATTACAAC+TGG | + | chr4_2:70250251-70250270 | None:intergenic | 45.0% | |
| ATTAAGGCCATGCTGTTGTG+CGG | - | chr4_2:70251032-70251051 | Msa0619180:intron | 45.0% | |
| ! | TCAGCCTTATCCCACTAAGT+GGG | + | chr4_2:70251222-70251241 | None:intergenic | 45.0% |
| ! | TTCAGCCTTATCCCACTAAG+TGG | + | chr4_2:70251223-70251242 | None:intergenic | 45.0% |
| !! | CTTCTATTTTGGGTCTCCCA+TGG | - | chr4_2:70251358-70251377 | Msa0619180:intron | 45.0% |
| AGGCACCAATTAAGACCCAT+GGG | + | chr4_2:70251377-70251396 | None:intergenic | 45.0% | |
| ! | AAGGCACCAATTAAGACCCA+TGG | + | chr4_2:70251378-70251397 | None:intergenic | 45.0% |
| CAAGCAAGACTGAAGCATGA+AGG | + | chr4_2:70251397-70251416 | None:intergenic | 45.0% | |
| !! | ATTAATTGAAAAAAAAAAAA+AGG | - | chr4_2:70246607-70246626 | Msa0619180:intron | 5.0% |
| !! | AAAAAATAATTTCTAAATTT+GGG | + | chr4_2:70250074-70250093 | None:intergenic | 5.0% |
| !! | TAAAAAATAATTTCTAAATT+TGG | + | chr4_2:70250075-70250094 | None:intergenic | 5.0% |
| TCTCACACAATTCTCGGGTC+GGG | + | chr4_2:70245603-70245622 | None:intergenic | 50.0% | |
| GGTTGTTCTTTGAGTCGGAC+CGG | - | chr4_2:70245629-70245648 | Msa0619180:three_prime_UTR | 50.0% | |
| !! | TCAGACGATTCGGTGCAAGA+AGG | - | chr4_2:70245667-70245686 | Msa0619180:three_prime_UTR | 50.0% |
| !! | CAGAAGTGTGTCGGTGTTAC+GGG | + | chr4_2:70246086-70246105 | None:intergenic | 50.0% |
| AGGGCATAAGTTTCCCCTTG+AGG | - | chr4_2:70246792-70246811 | Msa0619180:intron | 50.0% | |
| GTTTCCCCTTGAGGAAGAGT+TGG | - | chr4_2:70246801-70246820 | Msa0619180:intron | 50.0% | |
| !! | ATGCAGGAATGATGGGCTCT+GGG | - | chr4_2:70247149-70247168 | Msa0619180:intron | 50.0% |
| TAGATAAAAACGGGGGGAGG+GGG | - | chr4_2:70247575-70247594 | Msa0619180:intron | 50.0% | |
| GAGAAGGAGGTCAGTTGGAA+AGG | - | chr4_2:70247883-70247902 | Msa0619180:intron | 50.0% | |
| ATAAGCTGCTCCAAGGAGAC+GGG | - | chr4_2:70248025-70248044 | Msa0619180:intron | 50.0% | |
| ! | GCACTGACACTTCACATCGA+AGG | + | chr4_2:70248175-70248194 | None:intergenic | 50.0% |
| GTAGAGACAGCAAATGGGCA+TGG | - | chr4_2:70248497-70248516 | Msa0619180:intron | 50.0% | |
| ACTCGCTCCTAGTAACAAGC+TGG | + | chr4_2:70248583-70248602 | None:intergenic | 50.0% | |
| TCACCCATGTCACAGATGGA+CGG | - | chr4_2:70248638-70248657 | Msa0619180:intron | 50.0% | |
| ACCTGTAAAGTTGGACAGGG+CGG | + | chr4_2:70248668-70248687 | None:intergenic | 50.0% | |
| GCTGTATCGCTACAGCGTAA+CGG | - | chr4_2:70248969-70248988 | Msa0619180:CDS | 50.0% | |
| !! | GAATTGTTCCGGCTAGCCTA+TGG | - | chr4_2:70249590-70249609 | Msa0619180:CDS | 50.0% |
| TGACAGAACCATAGGCTAGC+CGG | + | chr4_2:70249601-70249620 | None:intergenic | 50.0% | |
| ! | TGCACAAGGGGGTTAGTGTT+TGG | - | chr4_2:70249855-70249874 | Msa0619180:intron | 50.0% |
| ! | CTTTTGGCCAATGCTTCCAC+TGG | + | chr4_2:70249890-70249909 | None:intergenic | 50.0% |
| GCCAAAAGAATTGCAGCCGT+GGG | - | chr4_2:70249902-70249921 | Msa0619180:intron | 50.0% | |
| ! | TCCCACGGCTGCAATTCTTT+TGG | + | chr4_2:70249906-70249925 | None:intergenic | 50.0% |
| AGGGCGAGAATTAGTTCCCA+CGG | + | chr4_2:70249921-70249940 | None:intergenic | 50.0% | |
| CCTGCTTCATCGTGTAGAAG+AGG | + | chr4_2:70249941-70249960 | None:intergenic | 50.0% | |
| CCTCTTCTACACGATGAAGC+AGG | - | chr4_2:70249938-70249957 | Msa0619180:intron | 50.0% | |
| AGCAGGAGATGCATACACTG+CGG | - | chr4_2:70249955-70249974 | Msa0619180:intron | 50.0% | |
| !! | TGAGACTCTAGCATTGGCGT+TGG | + | chr4_2:70250321-70250340 | None:intergenic | 50.0% |
| TTGCAGGCGCTAGAGCAAAT+TGG | - | chr4_2:70250903-70250922 | Msa0619180:intron | 50.0% | |
| AACAACACCGCACAACAGCA+TGG | + | chr4_2:70251042-70251061 | None:intergenic | 50.0% | |
| ! | CAGCCTTATCCCACTAAGTG+GGG | + | chr4_2:70251221-70251240 | None:intergenic | 50.0% |
| GGTCTCCCATGGGTCTTAAT+TGG | - | chr4_2:70251369-70251388 | Msa0619180:intron | 50.0% | |
| TTCTCGGGTCGGGTAAGAAC+CGG | + | chr4_2:70245593-70245612 | None:intergenic | 55.0% | |
| !! | CATGCAGGAATGATGGGCTC+TGG | - | chr4_2:70247148-70247167 | Msa0619180:intron | 55.0% |
| !! | GGCTCTGGGAAGACAACTGT+GGG | - | chr4_2:70247163-70247182 | Msa0619180:intron | 55.0% |
| !! | GCTCTGGGAAGACAACTGTG+GGG | - | chr4_2:70247164-70247183 | Msa0619180:intron | 55.0% |
| TTCGCGAGAAGGAGGTCAGT+TGG | - | chr4_2:70247878-70247897 | Msa0619180:intron | 55.0% | |
| !! | AAGCACTGACACGTCGACAC+CGG | - | chr4_2:70248059-70248078 | Msa0619180:intron | 55.0% |
| CACTTAGCAGTGTCACAGGC+AGG | - | chr4_2:70248284-70248303 | Msa0619180:intron | 55.0% | |
| ! | GGACGGACATTCCACTGACT+CGG | + | chr4_2:70248397-70248416 | None:intergenic | 55.0% |
| AACAAGCTGGTAAGAGGGGG+TGG | + | chr4_2:70248570-70248589 | None:intergenic | 55.0% | |
| CCACCGTCCATCTGTGACAT+GGG | + | chr4_2:70248644-70248663 | None:intergenic | 55.0% | |
| TCCACCGTCCATCTGTGACA+TGG | + | chr4_2:70248645-70248664 | None:intergenic | 55.0% | |
| ACCGCCCTGTCCAACTTTAC+AGG | - | chr4_2:70248664-70248683 | Msa0619180:intron | 55.0% | |
| TAGCAGGGAGTCCATGGCAT+AGG | + | chr4_2:70249090-70249109 | None:intergenic | 55.0% | |
| GGCCAAAAGAATTGCAGCCG+TGG | - | chr4_2:70249901-70249920 | Msa0619180:intron | 55.0% | |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | - | chr4_2:70250032-70250051 | Msa0619180:intron | 55.0% |
| TCTTGTTAACGAGTGCCCCC+GGG | - | chr4_2:70250033-70250052 | Msa0619180:intron | 55.0% | |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | + | chr4_2:70250051-70250070 | None:intergenic | 55.0% |
| !! | GATGCTTAAAGAGTGCCCCG+GGG | + | chr4_2:70250052-70250071 | None:intergenic | 55.0% |
| !! | GGATGCTTAAAGAGTGCCCC+GGG | + | chr4_2:70250053-70250072 | None:intergenic | 55.0% |
| !! | GGGATGCTTAAAGAGTGCCC+CGG | + | chr4_2:70250054-70250073 | None:intergenic | 55.0% |
| CACTAAGTGGGGTCGTCAAC+CGG | + | chr4_2:70251210-70251229 | None:intergenic | 55.0% | |
| GGTTGACGACCCCACTTAGT+GGG | - | chr4_2:70251209-70251228 | Msa0619180:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4_2:70251215-70251234 | Msa0619180:CDS | 55.0% | |
| !! | GGGCTCTGGGAAGACAACTG+TGG | - | chr4_2:70247162-70247181 | Msa0619180:intron | 60.0% |
| GGGAGGGGGTCAGTTATCCT+GGG | - | chr4_2:70247589-70247608 | Msa0619180:intron | 60.0% | |
| GGAGGGGGTCAGTTATCCTG+GGG | - | chr4_2:70247590-70247609 | Msa0619180:intron | 60.0% | |
| CCCATGTCACAGATGGACGG+TGG | - | chr4_2:70248641-70248660 | Msa0619180:intron | 60.0% | |
| AGTGACCAGGGCCTATGCCA+TGG | - | chr4_2:70249076-70249095 | Msa0619180:intron | 60.0% | |
| !! | CAGGTGGAGGTGCTGTTGTG+CGG | - | chr4_2:70249706-70249725 | Msa0619180:intron | 60.0% |
| CTTGTTAACGAGTGCCCCCG+GGG | - | chr4_2:70250034-70250053 | Msa0619180:intron | 60.0% | |
| CGGTTGACGACCCCACTTAG+TGG | - | chr4_2:70251208-70251227 | Msa0619180:CDS | 60.0% | |
| GGGGAGGGGGTCAGTTATCC+TGG | - | chr4_2:70247588-70247607 | Msa0619180:intron | 65.0% | |
| GGAGTCCATGGCATAGGCCC+TGG | + | chr4_2:70249084-70249103 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 70245270 | 70251538 | 70245270 | ID=Msa0619180;Name=Msa0619180 |
| chr4_2 | mRNA | 70245270 | 70251538 | 70245270 | ID=Msa0619180-mRNA-1;Parent=Msa0619180;Name=Msa0619180-mRNA-1;_AED=0.21;_eAED=0.21;_QI=148|1|1|1|0.75|0.61|13|502|286 |
| chr4_2 | exon | 70245270 | 70245303 | 70245270 | ID=Msa0619180-mRNA-1:exon:20450;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70245326 | 70245775 | 70245326 | ID=Msa0619180-mRNA-1:exon:20449;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70245825 | 70245899 | 70245825 | ID=Msa0619180-mRNA-1:exon:20448;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70246042 | 70246106 | 70246042 | ID=Msa0619180-mRNA-1:exon:20447;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70246461 | 70246539 | 70246461 | ID=Msa0619180-mRNA-1:exon:20446;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70246832 | 70246961 | 70246832 | ID=Msa0619180-mRNA-1:exon:20445;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70247069 | 70247151 | 70247069 | ID=Msa0619180-mRNA-1:exon:20444;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70248917 | 70249004 | 70248917 | ID=Msa0619180-mRNA-1:exon:20443;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70249581 | 70249653 | 70249581 | ID=Msa0619180-mRNA-1:exon:20442;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70249747 | 70249801 | 70249747 | ID=Msa0619180-mRNA-1:exon:20441;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70249977 | 70250035 | 70249977 | ID=Msa0619180-mRNA-1:exon:20440;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70251080 | 70251279 | 70251080 | ID=Msa0619180-mRNA-1:exon:20439;Parent=Msa0619180-mRNA-1 |
| chr4_2 | exon | 70251419 | 70251538 | 70251419 | ID=Msa0619180-mRNA-1:exon:20438;Parent=Msa0619180-mRNA-1 |
| chr4_2 | five_prime_UTR | 70251419 | 70251538 | 70251419 | ID=Msa0619180-mRNA-1:five_prime_utr;Parent=Msa0619180-mRNA-1 |
| chr4_2 | five_prime_UTR | 70251252 | 70251279 | 70251252 | ID=Msa0619180-mRNA-1:five_prime_utr;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70251080 | 70251251 | 70251080 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70249977 | 70250035 | 70249977 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70249747 | 70249801 | 70249747 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70249581 | 70249653 | 70249581 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70248917 | 70249004 | 70248917 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70247069 | 70247151 | 70247069 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70246832 | 70246961 | 70246832 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70246461 | 70246539 | 70246461 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70246042 | 70246106 | 70246042 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | CDS | 70245843 | 70245899 | 70245843 | ID=Msa0619180-mRNA-1:cds;Parent=Msa0619180-mRNA-1 |
| chr4_2 | three_prime_UTR | 70245825 | 70245842 | 70245825 | ID=Msa0619180-mRNA-1:three_prime_utr;Parent=Msa0619180-mRNA-1 |
| chr4_2 | three_prime_UTR | 70245326 | 70245775 | 70245326 | ID=Msa0619180-mRNA-1:three_prime_utr;Parent=Msa0619180-mRNA-1 |
| chr4_2 | three_prime_UTR | 70245270 | 70245303 | 70245270 | ID=Msa0619180-mRNA-1:three_prime_utr;Parent=Msa0619180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
