AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0722630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722630 MtrunA17_Chr5g0413431 80.567 247 14 3 69 309 446 664 3.72e-128 385
Msa0722630 MtrunA17_Chr5g0413431 62.162 74 11 1 1 74 309 365 2.92e-18 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722630 AT1G60490.1 68.952 248 41 5 69 309 452 670 5.21e-103 320
Msa0722630 AT1G60490.1 59.459 74 13 1 1 74 315 371 9.48e-17 81.6

Find 252 sgRNAs with CRISPR-Local

Find 773 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATTATGTTTAAAATTT+TGG 0.048039 5_1:-19998254 None:intergenic
ATTACAATCTTATGTAAATT+TGG 0.099042 5_1:-19998369 None:intergenic
GGACTACGGCTTTGGGTTTA+AGG 0.131872 5_1:-19998435 None:intergenic
TCCCAGATCTGTTGGGTTTA+AGG 0.146056 5_1:-19998330 None:intergenic
GTCAGTTGCTTTGTTAATAT+TGG 0.161898 5_1:+19997184 Msa0722630:CDS
AACACTAATATTCTTTATAA+AGG 0.205894 5_1:-19999262 None:intergenic
CCCGATGATCATGGACCTTT+TGG 0.209240 5_1:+19990650 Msa0722630:five_prime_UTR
CCCGATGATCATGGACCTTT+TGG 0.209240 5_1:+19997413 Msa0722630:CDS
TCAGCATAACAAAGAATATT+TGG 0.213287 5_1:-19987696 None:intergenic
TGTTCAAATGGTATCGTTAA+TGG 0.225983 5_1:+19989749 Msa0722630:five_prime_UTR
TTCCATACGCATTCAACTTA+TGG 0.231567 5_1:-19999188 None:intergenic
TACTCAAATGGTATCGTTAA+TGG 0.241811 5_1:+19996520 Msa0722630:CDS
AAGCTTAGACAGCTACTTTC+TGG 0.244205 5_1:+19995919 Msa0722630:CDS
TGCTTCGGTACGCCGGCTTA+TGG 0.246949 5_1:-19999030 None:intergenic
CATGTCTTTCTTAATTTCTC+TGG 0.263000 5_1:+19987322 Msa0722630:five_prime_UTR
CAAACTCTATCTCATGAATT+TGG 0.267050 5_1:+19989671 Msa0722630:five_prime_UTR
TTCAATACTGGTTTCATAAC+AGG 0.277999 5_1:+19995345 Msa0722630:CDS
CTGAGTGTGCATTGGCAATT+TGG 0.281912 5_1:-19989242 None:intergenic
AGTAGCACTGTCACTACTTT+TGG 0.284269 5_1:-19998572 None:intergenic
ATATCATACGGTTCAACTTA+TGG 0.286902 5_1:-19999097 None:intergenic
CAGTCACTAGTCCTTTCTTA+TGG 0.304976 5_1:+19998986 Msa0722630:three_prime_UTR
TCAGTTGCTTTGTTAATATT+GGG 0.310665 5_1:+19997185 Msa0722630:CDS
AGTGACAGAACTTAAGAATA+AGG 0.326256 5_1:-19998166 None:intergenic
TTACAATCTTATGTAAATTT+GGG 0.326363 5_1:-19998368 None:intergenic
TGCACATTATTAACCTTTCC+AGG 0.328164 5_1:-19991723 None:intergenic
AGCTGTAGAAATTTCAATAC+TGG 0.330577 5_1:+19995333 Msa0722630:CDS
AATGTTAAGGACTACGGCTT+TGG 0.331536 5_1:-19998443 None:intergenic
ACCAAGTATATAAGTGATAA+TGG 0.332013 5_1:-19997486 None:intergenic
AAAGACTTCAATGGTCTCTT+AGG 0.345661 5_1:-19989000 None:intergenic
AATTTCTTCGTTGTGTTGAA+TGG 0.348338 5_1:+19993863 Msa0722630:CDS
CCATACAATCTTCTATCAAC+TGG 0.351019 5_1:+19989813 Msa0722630:five_prime_UTR
AACCTTAAACCCAACAGATC+TGG 0.351147 5_1:+19998328 Msa0722630:three_prime_UTR
CAGACTCTTCGGTTCATCAT+TGG 0.351662 5_1:+19989410 Msa0722630:five_prime_UTR
GAAGCAAAAGCTTAGACTTT+GGG 0.353101 5_1:+19991662 Msa0722630:five_prime_UTR
CCATACAAGGTTCTAGCAAC+TGG 0.358818 5_1:+19996584 Msa0722630:CDS
ATTCTGTGTTTGCTCGCAAT+TGG 0.363236 5_1:+19989586 Msa0722630:five_prime_UTR
ACGCCGGCTTATGGATTAAC+AGG 0.363877 5_1:-19999021 None:intergenic
ATGTTAAGGACTACGGCTTT+GGG 0.368019 5_1:-19998442 None:intergenic
CAATGAAACCCAACAGATAT+TGG 0.368560 5_1:-19997625 None:intergenic
AATTTATCAAGAGTTAGATT+TGG 0.368782 5_1:+19998822 Msa0722630:three_prime_UTR
AGACTCTTCGGTTCATCATT+GGG 0.370153 5_1:+19989411 Msa0722630:five_prime_UTR
TTCTTTATAAAGGGTACATT+GGG 0.370224 5_1:-19999252 None:intergenic
CCAGTCAAAGTCCTAGTTGA+TGG 0.371804 5_1:-19987611 None:intergenic
ATCACTTATATACTTGGTAT+TGG 0.373407 5_1:+19997491 Msa0722630:CDS
TTCTGAGATCCCAGATCTGT+TGG 0.373569 5_1:-19998338 None:intergenic
ATGAAGCTCTGCAAGGAAAA+AGG 0.375090 5_1:+19989082 Msa0722630:five_prime_UTR
ACACTAATATTCTTTATAAA+GGG 0.377049 5_1:-19999261 None:intergenic
AGCTTCATTGACAGTGGAAA+TGG 0.382301 5_1:-19989067 None:intergenic
GAATTTGGAGATGGATATTA+CGG 0.382342 5_1:+19989686 Msa0722630:five_prime_UTR
ATCCCAGTGATGAGCACATT+TGG 0.382509 5_1:-19996161 None:intergenic
ACATGGGGAGTTGGAGCGTT+TGG 0.383046 5_1:+19991861 Msa0722630:five_prime_UTR
TATCATACGGTTCAACTTAT+GGG 0.383483 5_1:-19999096 None:intergenic
CTATGATATTTAGATCTCTC+TGG 0.385753 5_1:-19998649 None:intergenic
AGAATAAAACCAAAATCAAC+AGG 0.385764 5_1:-19989025 None:intergenic
ATCACATATATACTTGGTAT+TGG 0.386539 5_1:+19990728 Msa0722630:five_prime_UTR
CTTTGAATTCATCATTTGTA+AGG 0.386641 5_1:-19999710 None:intergenic
TCTCATGGTGAAGGATTGAT+TGG 0.388746 5_1:+19991590 Msa0722630:five_prime_UTR
TGTTGTAGATCAAATCAAAT+AGG 0.390075 5_1:-19997839 None:intergenic
CATTGAAAAGTGCCTTTGCT+TGG 0.393560 5_1:+19998462 Msa0722630:three_prime_UTR
ATAAAGGGTACATTGGGAAT+TGG 0.395132 5_1:-19999246 None:intergenic
ATACTTCAATATTCTTTGAA+TGG 0.397328 5_1:-19993752 None:intergenic
TTTGGGTTTAAGGTGGGGCT+TGG 0.397446 5_1:-19998425 None:intergenic
GGTGGATTTGCACCTCAGTA+TGG 0.399057 5_1:-19999415 None:intergenic
TGCCTTTGCTTGGACTGTCC+TGG 0.399727 5_1:+19998472 Msa0722630:three_prime_UTR
GGAAGCAAAAGCTTAGACTT+TGG 0.401049 5_1:+19991661 Msa0722630:five_prime_UTR
ATAGATACATAAACTTGGTT+TGG 0.405185 5_1:+19998009 Msa0722630:three_prime_UTR
AAACTTAAATCAAACAAAAC+TGG 0.409107 5_1:+19998297 Msa0722630:three_prime_UTR
TTCAGTTGGTCCAGACTCTT+CGG 0.410003 5_1:+19989399 Msa0722630:five_prime_UTR
ATATTCTTTGTTATGCTGAC+TGG 0.410741 5_1:+19987700 Msa0722630:five_prime_UTR
AAGAATCTTAGATCTTAGAT+AGG 0.416587 5_1:-19987082 None:intergenic
TTCTTTGATGTCTGAGAAGA+GGG 0.418191 5_1:+19993831 Msa0722630:exon
TCCATTATCACTTATATACT+TGG 0.421980 5_1:+19997485 Msa0722630:CDS
TTGAACCTTGGTTTATGCTT+CGG 0.422013 5_1:-19999045 None:intergenic
AAATATCTTAAGAAATGTAT+AGG 0.423572 5_1:+19998792 Msa0722630:three_prime_UTR
CTCTACCTGTGCCAACGAAC+AGG 0.430996 5_1:-19996624 None:intergenic
ACACCAAATGTGCTCATCAC+TGG 0.431995 5_1:+19996158 Msa0722630:CDS
CCAGTTGCTAGAACCTTGTA+TGG 0.435768 5_1:-19996584 None:intergenic
TGTTCATATCCAAGGTGATC+AGG 0.437313 5_1:-19999350 None:intergenic
GATCTAAATATCATAGAATC+TGG 0.438696 5_1:+19998656 Msa0722630:three_prime_UTR
CAATGATGAACCGAAGAGTC+TGG 0.438756 5_1:-19989409 None:intergenic
GCACTAGAATTGACGGGAAG+TGG 0.440136 5_1:+19995379 Msa0722630:CDS
ATTGACAGTGGAAATGGCTT+AGG 0.441885 5_1:-19989061 None:intergenic
ATATGAACATTGAAATAGTA+AGG 0.443670 5_1:+19999364 Msa0722630:three_prime_UTR
AAGTTGAATGCGTATGGAAA+GGG 0.446434 5_1:+19999192 Msa0722630:three_prime_UTR
TCTCCACTCAAAGTCCTTGT+TGG 0.448352 5_1:-19993778 None:intergenic
ATTCTTTATAAAGGGTACAT+TGG 0.448771 5_1:-19999253 None:intergenic
CCAGTTGATAGAAGATTGTA+TGG 0.448939 5_1:-19989813 None:intergenic
ACTTTAATTGTGTGATTTGT+GGG 0.449427 5_1:+19989167 Msa0722630:five_prime_UTR
CAATATTACTTTACTTCAGT+TGG 0.450714 5_1:+19989385 Msa0722630:five_prime_UTR
TACGGCTTTGGGTTTAAGGT+GGG 0.451881 5_1:-19998431 None:intergenic
TCTGAGATCCCAGATCTGTT+GGG 0.454469 5_1:-19998337 None:intergenic
AGAAAGAATGCCATCAGAAC+TGG 0.455613 5_1:+19998508 Msa0722630:three_prime_UTR
CAGTTGCACCAATATCTGTT+GGG 0.460390 5_1:+19997617 Msa0722630:intron
CACTTTAATTGTGTGATTTG+TGG 0.463945 5_1:+19989166 Msa0722630:five_prime_UTR
TGGGCAAGATGAAGGCATAC+TGG 0.465249 5_1:+19989833 Msa0722630:five_prime_UTR
CCTGCATTTAACGCCATACA+AGG 0.466135 5_1:+19996571 Msa0722630:CDS
TCTTTAGAAAATAAACTACT+TGG 0.466250 5_1:+19998397 Msa0722630:three_prime_UTR
TATAAATGTTTCAAGACAGT+TGG 0.468668 5_1:-19990681 None:intergenic
TTCACTTCTCAGATGGGAGC+TGG 0.469465 5_1:+19995766 Msa0722630:intron
GCAGGAATACCAACTGGTCC+TGG 0.471798 5_1:-19989550 None:intergenic
GCAGGAATACCAACTGGTCC+TGG 0.471798 5_1:-19996298 None:intergenic
TCCATCCTGTTCGTTGGCAC+AGG 0.474454 5_1:+19996619 Msa0722630:CDS
CCCGACCTGCATCAATGAAT+AGG 0.475593 5_1:-19989868 None:intergenic
TCTTAGATCTTAGATAGGTT+AGG 0.475843 5_1:-19987077 None:intergenic
TATAAACATTTCAAGACAGT+TGG 0.477924 5_1:-19997444 None:intergenic
GGACTTTGAGTGGAGATGAT+AGG 0.478943 5_1:+19993785 Msa0722630:five_prime_UTR
TAAAGCACAAACCTGAAAAC+AGG 0.480504 5_1:-19989330 None:intergenic
TCACTGTTGTTCCATAAGAA+AGG 0.481083 5_1:-19998997 None:intergenic
TGGGATCTTTCTCATGGTGA+AGG 0.482025 5_1:+19991581 Msa0722630:five_prime_UTR
CTGTAAAATCATATTTAAGA+AGG 0.483993 5_1:+19989514 Msa0722630:five_prime_UTR
CTGTAAAATCATATTTAAGA+AGG 0.483993 5_1:+19996262 Msa0722630:CDS
CACCAAATGTGCTCATCACT+GGG 0.484585 5_1:+19996159 Msa0722630:CDS
CCAAAAGGTCCATGATCATC+GGG 0.487741 5_1:-19990650 None:intergenic
CCAAAAGGTCCATGATCATC+GGG 0.487741 5_1:-19997413 None:intergenic
GGACTTTGACTGGAGATGAT+AGG 0.490033 5_1:+19987621 Msa0722630:five_prime_UTR
AGGAAGATGGATTTAAACGT+TGG 0.490871 5_1:+19995800 Msa0722630:CDS
AGGCATGTTGGTTGTTCAAA+TGG 0.491667 5_1:+19989737 Msa0722630:five_prime_UTR
GTAAAATCATATTTAAGAAG+GGG 0.492011 5_1:+19989516 Msa0722630:five_prime_UTR
GTAAAATCATATTTAAGAAG+GGG 0.492011 5_1:+19996264 Msa0722630:CDS
TCCATCCTATTCATTGATGC+AGG 0.492046 5_1:+19989863 Msa0722630:five_prime_UTR
TATTTCAATGTTCATATCCA+AGG 0.492091 5_1:-19999358 None:intergenic
CTATCAACTGGGCAAGATGA+AGG 0.494355 5_1:+19989825 Msa0722630:five_prime_UTR
CAGGTTTGGGATCTTTCTCA+TGG 0.498015 5_1:+19991575 Msa0722630:intron
GCAGTTGCACCAATATCTGT+TGG 0.498079 5_1:+19997616 Msa0722630:intron
TTCGAAAACGAGGTCACTAT+CGG 0.499066 5_1:+19997788 Msa0722630:three_prime_UTR
CTACGGCTTTGGGTTTAAGG+TGG 0.499075 5_1:-19998432 None:intergenic
CAATATTTCAAGTTGAACCT+TGG 0.500888 5_1:-19999057 None:intergenic
ACCAAGTATATATGTGATAA+CGG 0.501900 5_1:-19990723 None:intergenic
TGTGTTCTCGTTAGGTCCCT+AGG 0.501978 5_1:+19991833 Msa0722630:intron
ACCTTAAACCCAACAGATCT+GGG 0.502222 5_1:+19998329 Msa0722630:three_prime_UTR
GGTGTCAGAGGTGATCGTAT+TGG 0.504557 5_1:-19996140 None:intergenic
TCCAAAAGGTCCATGATCAT+CGG 0.506223 5_1:-19990651 None:intergenic
TCCAAAAGGTCCATGATCAT+CGG 0.506223 5_1:-19997414 None:intergenic
TGTAAAATCATATTTAAGAA+GGG 0.506525 5_1:+19989515 Msa0722630:five_prime_UTR
TGTAAAATCATATTTAAGAA+GGG 0.506525 5_1:+19996263 Msa0722630:CDS
TATGATATTTAGATCTCTCT+GGG 0.507250 5_1:-19998648 None:intergenic
GGTGCGAACGGAGAGGAAGA+TGG 0.507625 5_1:+19995787 Msa0722630:CDS
ATATACTTGGTATTGGAAGC+AGG 0.509855 5_1:+19997498 Msa0722630:CDS
AACTCCCCATGTTCATGCCT+AGG 0.511376 5_1:-19991850 None:intergenic
GTTTAGTTACATAAATATGA+AGG 0.511992 5_1:+19989717 Msa0722630:five_prime_UTR
CACCTGCAACAAAATTGATC+GGG 0.515267 5_1:+19999136 Msa0722630:three_prime_UTR
TGCTGACTGGAGTGAAGTAC+AGG 0.516037 5_1:+19987713 Msa0722630:five_prime_UTR
TTCCATAAGTTGAATGCGTA+TGG 0.518231 5_1:+19999186 Msa0722630:three_prime_UTR
AGATCTTACAATCAAAATCA+AGG 0.518427 5_1:+19998612 Msa0722630:three_prime_UTR
CCTTGTATGGCGTTAAATGC+AGG 0.520102 5_1:-19996571 None:intergenic
AAATTATGTGCCAGTTCTGA+TGG 0.522415 5_1:-19998518 None:intergenic
ATTCATTCCATCCTGTTCGT+TGG 0.527025 5_1:+19996613 Msa0722630:CDS
GATTGTATGGCGTTAAATGC+AGG 0.527628 5_1:-19989800 None:intergenic
GAATGTAACTAGAGCTTACC+AGG 0.527754 5_1:-19997663 None:intergenic
CCACTCAAAGTCCTTGTTGG+AGG 0.528054 5_1:-19993775 None:intergenic
TTGGACTGTCCTGGTTGCAA+TGG 0.529640 5_1:+19998481 Msa0722630:three_prime_UTR
TCCGTTATCACATATATACT+TGG 0.530140 5_1:+19990722 Msa0722630:five_prime_UTR
TAGGCATGAACATGGGGAGT+TGG 0.531683 5_1:+19991852 Msa0722630:five_prime_UTR
CTATCTCATGAATTTGGAGA+TGG 0.531744 5_1:+19989677 Msa0722630:five_prime_UTR
ATGTTTATACTAAGCTGTGC+TGG 0.532290 5_1:+19997458 Msa0722630:CDS
CAGTTGGCTGTAATTCCAAA+AGG 0.533444 5_1:-19990665 None:intergenic
CAGTTGGCTGTAATTCCAAA+AGG 0.533444 5_1:-19997428 None:intergenic
TTGCGCTATTGTGATTTACC+TGG 0.533810 5_1:+19997645 Msa0722630:CDS
TTTCTTTGATGTCTGAGAAG+AGG 0.535885 5_1:+19993830 Msa0722630:exon
CCATCAACTAGGACTTTGAC+TGG 0.535916 5_1:+19987611 Msa0722630:five_prime_UTR
TGGATATATATGCAGTCCTA+TGG 0.535977 5_1:-19999436 None:intergenic
TCTGACGTTAATCATCCAAT+GGG 0.539168 5_1:-19989138 None:intergenic
GATTGACGTTTGTGATGCAC+TGG 0.539342 5_1:+19995407 Msa0722630:CDS
GAATGTAATTAGAGCTTACC+AGG 0.539839 5_1:-19998096 None:intergenic
AAAACAAGCACTAGAATTGA+CGG 0.540358 5_1:+19995372 Msa0722630:CDS
TTAATTATTGATGACTCTGA+GGG 0.545426 5_1:-19996188 None:intergenic
GAGATGATAGGCAGCTCTTG+TGG 0.547916 5_1:+19987633 Msa0722630:five_prime_UTR
ATCTGACGTTAATCATCCAA+TGG 0.549930 5_1:-19989139 None:intergenic
CAACAGGGAAAAGACTTCAA+TGG 0.550202 5_1:-19989009 None:intergenic
TTTATGAGCAAAATTACACT+AGG 0.551257 5_1:-19998926 None:intergenic
GTTCAATCACTAGAGATGTC+AGG 0.551302 5_1:+19995863 Msa0722630:CDS
GCACCTGCAACAAAATTGAT+CGG 0.551516 5_1:+19999135 Msa0722630:three_prime_UTR
AAAACAGATGAAGAAGCAAT+CGG 0.554277 5_1:-19987376 None:intergenic
CAGGTCGCAGCCTTTGCAGT+TGG 0.554766 5_1:+19989262 Msa0722630:five_prime_UTR
GAGATGATAGGCAGCGCTTG+TGG 0.554879 5_1:+19993797 Msa0722630:five_prime_UTR
CATCTTGAAAGAGCTGATGA+TGG 0.556025 5_1:+19989355 Msa0722630:five_prime_UTR
CATGGTGAAGGATTGATTGG+AGG 0.557450 5_1:+19991593 Msa0722630:five_prime_UTR
GACTTCAATGGTCTCTTAGG+AGG 0.557635 5_1:-19988997 None:intergenic
TTTAATTATTGATGACTCTG+AGG 0.558343 5_1:-19996189 None:intergenic
ATATACTTGGTATTGGAGAC+AGG 0.562402 5_1:+19990735 Msa0722630:five_prime_UTR
TGTTGAATGGAGTGATGTAC+AGG 0.562727 5_1:+19993876 Msa0722630:CDS
ACTCCCCATGTTCATGCCTA+GGG 0.563525 5_1:-19991849 None:intergenic
TTGTTAAAAGAGTAGAATTG+TGG 0.564998 5_1:-19991618 None:intergenic
TGTTGACTAACTTTGAATGA+AGG 0.565012 5_1:-19999762 None:intergenic
TAAGTTGAATGCGTATGGAA+AGG 0.565152 5_1:+19999191 Msa0722630:three_prime_UTR
CTCTACCTCTACACCTGGAA+AGG 0.565360 5_1:+19991710 Msa0722630:five_prime_UTR
AGCAAACACAGAATATAAGA+AGG 0.565368 5_1:-19989577 None:intergenic
GAACCTGTTAATCCATAAGC+CGG 0.565676 5_1:+19999018 Msa0722630:three_prime_UTR
AACGTTGGAAGAGTTTAGTA+CGG 0.567391 5_1:+19995815 Msa0722630:CDS
GCAACAAAATTGATCGGGAT+CGG 0.567841 5_1:+19999141 Msa0722630:three_prime_UTR
ACCTGCATCAATGAATAGGA+TGG 0.569861 5_1:-19989864 None:intergenic
CAAATTGCCAATGCACACTC+AGG 0.570061 5_1:+19989243 Msa0722630:five_prime_UTR
TGGTTTATGCTTCGGTACGC+CGG 0.575394 5_1:-19999037 None:intergenic
TTAGATATTGATGACTCTGA+AGG 0.576708 5_1:-19989440 None:intergenic
CACTAGAATTGACGGGAAGT+GGG 0.577069 5_1:+19995380 Msa0722630:CDS
CTGAAAAGCAAATATCCCAT+TGG 0.580004 5_1:+19989123 Msa0722630:five_prime_UTR
CAGATGGGAGCTGGTGCGAA+CGG 0.580124 5_1:+19995775 Msa0722630:intron
TTGCAGAGCTTCATTGACAG+TGG 0.580771 5_1:-19989073 None:intergenic
GTGTGTCAAAGCACATAGGC+AGG 0.584398 5_1:-19989649 None:intergenic
GACCAATACCTTGTCAAAGT+AGG 0.585742 5_1:-19995956 None:intergenic
TCTTCTTCTGTGTATTACCT+CGG 0.588947 5_1:-19995891 None:intergenic
ATTAACCTTTCCAGGTGTAG+AGG 0.590402 5_1:-19991715 None:intergenic
ACCTGTGCCAACGAACAGGA+TGG 0.593791 5_1:-19996620 None:intergenic
AAGCAAAAGCTTAGACTTTG+GGG 0.594404 5_1:+19991663 Msa0722630:five_prime_UTR
TCTCTCTGGGAAATTCATGC+AGG 0.594948 5_1:-19998635 None:intergenic
CAGAGAAATTAAGAAAGACA+TGG 0.595127 5_1:-19987321 None:intergenic
GTATGATAGCACATATCATA+CGG 0.595569 5_1:-19999109 None:intergenic
ATACAAACTTATCAATCAAG+AGG 0.596293 5_1:-19999217 None:intergenic
TGATCTTCGCCAGGACCAGT+TGG 0.597803 5_1:+19989541 Msa0722630:five_prime_UTR
TGATCTTCGCCAGGACCAGT+TGG 0.597803 5_1:+19996289 Msa0722630:CDS
TTTCTGCTACCATTGCAACC+AGG 0.598488 5_1:-19998490 None:intergenic
TGGGGTGGAAAAGAAGCAGA+TGG 0.598674 5_1:+19991681 Msa0722630:five_prime_UTR
TAGGTCCCTAGGCATGAACA+TGG 0.600065 5_1:+19991844 Msa0722630:intron
GCATTCTCTACCTCTACACC+TGG 0.600362 5_1:+19991705 Msa0722630:five_prime_UTR
AGGTCCCTAGGCATGAACAT+GGG 0.600708 5_1:+19991845 Msa0722630:intron
TCTCAAACACCAGAGAAAAG+CGG 0.606137 5_1:-19987661 None:intergenic
AAACAAGCACTAGAATTGAC+GGG 0.606775 5_1:+19995373 Msa0722630:CDS
ACATGCATTTGTATTCAATG+AGG 0.606858 5_1:-19997163 None:intergenic
TTAGATAGGTTAGGTTACAG+AGG 0.607993 5_1:-19987068 None:intergenic
CATACAATCTTCTATCAACT+GGG 0.608403 5_1:+19989814 Msa0722630:five_prime_UTR
ACATAAATATGAAGGCATGT+TGG 0.609083 5_1:+19989725 Msa0722630:five_prime_UTR
ACGGCTTTGGGTTTAAGGTG+GGG 0.612360 5_1:-19998430 None:intergenic
ACTGTCAATGAAGCTCTGCA+AGG 0.612628 5_1:+19989075 Msa0722630:five_prime_UTR
GGTCCCTAGGCATGAACATG+GGG 0.613131 5_1:+19991846 Msa0722630:intron
CATACAAGGTTCTAGCAACT+GGG 0.613213 5_1:+19996585 Msa0722630:CDS
TTACATCATCCTGATCACCT+TGG 0.614392 5_1:+19999341 Msa0722630:three_prime_UTR
CTGAGGTGCAAATCCACCAT+AGG 0.616023 5_1:+19999420 Msa0722630:three_prime_UTR
TACATGTATACCAACTGCAA+AGG 0.617668 5_1:-19989272 None:intergenic
TAAAATCATATTTAAGAAGG+GGG 0.617913 5_1:+19989517 Msa0722630:five_prime_UTR
TAAAATCATATTTAAGAAGG+GGG 0.617913 5_1:+19996265 Msa0722630:CDS
CCTCCAACAAGGACTTTGAG+TGG 0.617926 5_1:+19993775 Msa0722630:five_prime_UTR
GCTGCGACCTGAGTGTGCAT+TGG 0.623693 5_1:-19989250 None:intergenic
CAAAAGCTTAGACTTTGGGG+TGG 0.626595 5_1:+19991666 Msa0722630:five_prime_UTR
TGAACTTACCTACTTTGACA+AGG 0.633252 5_1:+19995948 Msa0722630:CDS
ATATATATGCAGTCCTATGG+TGG 0.633920 5_1:-19999433 None:intergenic
AGTTGAATGCGTATGGAAAG+GGG 0.637090 5_1:+19999193 Msa0722630:three_prime_UTR
TGTGTCAAGATCCATCAACT+AGG 0.637733 5_1:+19987600 Msa0722630:intron
GTTTGTGTGTCAAAGCACAT+AGG 0.640199 5_1:-19989653 None:intergenic
AACCAGGACAGTCCAAGCAA+AGG 0.642836 5_1:-19998474 None:intergenic
TTATGAGCAAAATTACACTA+GGG 0.653047 5_1:-19998925 None:intergenic
ATGAGCACATTTGGTGTCAG+AGG 0.654641 5_1:-19996152 None:intergenic
GGGAGCTGGTGCGAACGGAG+AGG 0.662776 5_1:+19995780 Msa0722630:CDS
GGTGTACAAATTTCCCCGTG+TGG 0.670549 5_1:-19989309 None:intergenic
TGACTAACTTTGAATGAAGG+TGG 0.680251 5_1:-19999759 None:intergenic
TATTGAAGTATCCTCCAACA+AGG 0.684448 5_1:+19993764 Msa0722630:five_prime_UTR
GCGAGTTCAATTCCATACTG+AGG 0.696761 5_1:+19999403 Msa0722630:three_prime_UTR
CATACGGTTCAACTTATGGG+AGG 0.699869 5_1:-19999093 None:intergenic
AGAGATGTCAGGAATGTCCG+AGG 0.705449 5_1:+19995874 Msa0722630:CDS
TTGTAAGATCTAACACAGTG+AGG 0.721573 5_1:-19998600 None:intergenic
GAATAAAACCAAAATCAACA+GGG 0.722112 5_1:-19989024 None:intergenic
ATGATATGTGCTATCATACG+AGG 0.723847 5_1:+19999113 Msa0722630:three_prime_UTR
GCGTACCGAAGCATAAACCA+AGG 0.730166 5_1:+19999040 Msa0722630:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATATTTTTAAATCATC+TGG + chr5_1:19987347-19987366 Msa0722630:five_prime_UTR 10.0%
!!! TTTTTTTAATTATGTATAGA+CGG + chr5_1:19988253-19988272 Msa0722630:intron 10.0%
!!! AATAATTTGAAATTATTAGT+TGG + chr5_1:19990095-19990114 Msa0722630:intron 10.0%
!! ACATAAGTAAATATATTATA+GGG - chr5_1:19992142-19992161 None:intergenic 10.0%
!! ATCTAAAAAAAAAATATATC+TGG + chr5_1:19993396-19993415 Msa0722630:intron 10.0%
!!! ATTAAATTTTCATTAATACA+GGG - chr5_1:19993479-19993498 None:intergenic 10.0%
!!! TATTAAATTTTCATTAATAC+AGG - chr5_1:19993480-19993499 None:intergenic 10.0%
!! TGTATTAATGAAAATTTAAT+AGG + chr5_1:19993479-19993498 Msa0722630:intron 10.0%
!!! CAACATTTTATATTTTTTAT+TGG + chr5_1:19997857-19997876 Msa0722630:three_prime_UTR 10.0%
!!! AGAAATTATGTTTAAAATTT+TGG - chr5_1:19998257-19998276 None:intergenic 10.0%
!!! TCATTTGATTATTTTAAATA+TGG - chr5_1:19999459-19999478 None:intergenic 10.0%
!!! TTTTTTTTTTATTGTAGATC+TGG - chr5_1:19987119-19987138 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGTAGATC+TGG - chr5_1:19987251-19987270 None:intergenic 15.0%
!! GATCTACAAAAAAAAAAAAA+AGG + chr5_1:19987251-19987270 Msa0722630:five_prime_UTR 15.0%
!! GATATTATTATATATGACTT+TGG + chr5_1:19987768-19987787 Msa0722630:intron 15.0%
!! AAAAAAAAAACACTTCAAAA+GGG - chr5_1:19988234-19988253 None:intergenic 15.0%
!! AAAAAAAAAAACACTTCAAA+AGG - chr5_1:19988235-19988254 None:intergenic 15.0%
!!! TTTTTTAATTATGTATAGAC+GGG + chr5_1:19988254-19988273 Msa0722630:intron 15.0%
!!! TATTCTACATTTTATGAAAT+TGG + chr5_1:19988892-19988911 Msa0722630:intron 15.0%
!! TGTAAAATCATATTTAAGAA+GGG + chr5_1:19989515-19989534 Msa0722630:five_prime_UTR 15.0%
!!! ACTTTTTTTATTTTATTTGG+AGG + chr5_1:19990306-19990325 Msa0722630:intron 15.0%
!!! CTTTTTTTATTTTATTTGGA+GGG + chr5_1:19990307-19990326 Msa0722630:intron 15.0%
!! CACATAAGTAAATATATTAT+AGG - chr5_1:19992143-19992162 None:intergenic 15.0%
!! CATATCTGTTAAAAAAATAT+AGG + chr5_1:19992804-19992823 Msa0722630:intron 15.0%
!!! TAAATGATTTTAGATTTAAC+CGG + chr5_1:19993243-19993262 Msa0722630:intron 15.0%
!! TTAGAAACTTAAAAAAATAC+CGG - chr5_1:19993265-19993284 None:intergenic 15.0%
!! TATTTCAATAAAAATGTTAG+TGG - chr5_1:19994513-19994532 None:intergenic 15.0%
!! AAAAGAAGATAAACAATAAA+TGG - chr5_1:19996000-19996019 None:intergenic 15.0%
!! TGTAAAATCATATTTAAGAA+GGG + chr5_1:19989515-19989534 Msa0722630:five_prime_UTR 15.0%
!!! ATAAATATTTGTCTTTTTGT+AGG + chr5_1:19996496-19996515 Msa0722630:intron 15.0%
!! TAAAAATAGATACATAAACT+TGG + chr5_1:19991356-19991375 Msa0722630:intron 15.0%
!! TTACAATCTTATGTAAATTT+GGG - chr5_1:19998371-19998390 None:intergenic 15.0%
!! ATTACAATCTTATGTAAATT+TGG - chr5_1:19998372-19998391 None:intergenic 15.0%
!!! TTTTTATAGTAGTTATGTTT+GGG - chr5_1:19998774-19998793 None:intergenic 15.0%
!!! TTTTTTATAGTAGTTATGTT+TGG - chr5_1:19998775-19998794 None:intergenic 15.0%
!! AAATATCTTAAGAAATGTAT+AGG + chr5_1:19998792-19998811 Msa0722630:three_prime_UTR 15.0%
!! ACACTAATATTCTTTATAAA+GGG - chr5_1:19999264-19999283 None:intergenic 15.0%
!! AACACTAATATTCTTTATAA+AGG - chr5_1:19999265-19999284 None:intergenic 15.0%
!!! ATTTTGTGTATGAATTTTTA+AGG - chr5_1:19999530-19999549 None:intergenic 15.0%
!! TATTATATATGACTTTGGTT+TGG + chr5_1:19987773-19987792 Msa0722630:intron 20.0%
!!! ATTATATATGACTTTGGTTT+GGG + chr5_1:19987774-19987793 Msa0722630:intron 20.0%
!!! AATGAGGATTAATTACATTT+TGG - chr5_1:19987921-19987940 None:intergenic 20.0%
!! AAAGAATTGAATTGTAGAAA+GGG - chr5_1:19987978-19987997 None:intergenic 20.0%
!! AAAAGAATTGAATTGTAGAA+AGG - chr5_1:19987979-19987998 None:intergenic 20.0%
!!! GTTTACATTTTCTTTTAAAG+TGG - chr5_1:19988023-19988042 None:intergenic 20.0%
!!! GTGATTTATTTTCACTATAT+TGG - chr5_1:19988049-19988068 None:intergenic 20.0%
!!! TTTCCAGATTTGAAATAAAA+GGG - chr5_1:19988171-19988190 None:intergenic 20.0%
!! AAAAAAAAACACTTCAAAAG+GGG - chr5_1:19988233-19988252 None:intergenic 20.0%
!! ATAAAAAAACATTATCCAAG+AGG - chr5_1:19988657-19988676 None:intergenic 20.0%
!!! TTATTATTTTTCAGTTTCTG+TGG + chr5_1:19988781-19988800 Msa0722630:intron 20.0%
!! AGAAAGATAAAAAAAAACAC+AGG - chr5_1:19988825-19988844 None:intergenic 20.0%
!!! GTTTTTTTTTATCTTTCTCT+TGG + chr5_1:19988827-19988846 Msa0722630:intron 20.0%
!! AAAATTATCACTTCAAATTG+GGG - chr5_1:19988951-19988970 None:intergenic 20.0%
!! GAAAATTATCACTTCAAATT+GGG - chr5_1:19988952-19988971 None:intergenic 20.0%
!! AGAAAATTATCACTTCAAAT+TGG - chr5_1:19988953-19988972 None:intergenic 20.0%
!!! TTGATTTTGGTTTTATTCTT+GGG + chr5_1:19989029-19989048 Msa0722630:five_prime_UTR 20.0%
!!! CTTCTTAAATATGATTTTAC+AGG - chr5_1:19989516-19989535 None:intergenic 20.0%
!! CTGTAAAATCATATTTAAGA+AGG + chr5_1:19989514-19989533 Msa0722630:five_prime_UTR 20.0%
!! GTAAAATCATATTTAAGAAG+GGG + chr5_1:19989516-19989535 Msa0722630:five_prime_UTR 20.0%
!! TAAAATCATATTTAAGAAGG+GGG + chr5_1:19989517-19989536 Msa0722630:five_prime_UTR 20.0%
!! GTTTAGTTACATAAATATGA+AGG + chr5_1:19989717-19989736 Msa0722630:five_prime_UTR 20.0%
!!! TTAAACCAATGTTTTTCAAA+TGG + chr5_1:19990192-19990211 Msa0722630:intron 20.0%
!!! ATGTATTAGCACAATTTTAT+TGG + chr5_1:19990226-19990245 Msa0722630:intron 20.0%
!! CAAAATAATTGTCCAATAAA+GGG - chr5_1:19990501-19990520 None:intergenic 20.0%
!! TCAAAATAATTGTCCAATAA+AGG - chr5_1:19990502-19990521 None:intergenic 20.0%
!!! TTCCTTTAGAAAATGAATTA+TGG + chr5_1:19991195-19991214 Msa0722630:intron 20.0%
!!! AACCATAATTCATTTTCTAA+AGG - chr5_1:19991200-19991219 None:intergenic 20.0%
!! AAGCTTAAAAAAAGTAAAAC+AGG - chr5_1:19991271-19991290 None:intergenic 20.0%
!! ATAGATACATAAACTTAGTT+TGG + chr5_1:19991361-19991380 Msa0722630:intron 20.0%
!! ATTTATCTTGAAGTTTCTAT+TGG + chr5_1:19991428-19991447 Msa0722630:intron 20.0%
!!! TTTTAAGTGATTGTATTCAT+AGG + chr5_1:19991747-19991766 Msa0722630:intron 20.0%
!!! TATCATATGCTGATTTAAAA+AGG - chr5_1:19991807-19991826 None:intergenic 20.0%
!!! GTTTTAAATCTATATGATAG+TGG - chr5_1:19992194-19992213 None:intergenic 20.0%
!! ATGGAAAAAATTATGTTGTA+CGG + chr5_1:19992423-19992442 Msa0722630:intron 20.0%
!! CATTTGAATTACATTTGAAT+AGG - chr5_1:19992549-19992568 None:intergenic 20.0%
!! GTTAATATTCTTAGAAATGT+AGG - chr5_1:19992605-19992624 None:intergenic 20.0%
!! ATTGATTATACTATTGACAA+AGG - chr5_1:19992754-19992773 None:intergenic 20.0%
!! GTTAAAAAAATATAGGAATC+TGG + chr5_1:19992811-19992830 Msa0722630:intron 20.0%
!!! TATTTTATTTGGCATTTTGA+TGG - chr5_1:19993505-19993524 None:intergenic 20.0%
!! ATCAAAGCAAAAAACAATTA+GGG - chr5_1:19993615-19993634 None:intergenic 20.0%
!! ATACTTCAATATTCTTTGAA+TGG - chr5_1:19993755-19993774 None:intergenic 20.0%
!! ATATTATGATATATCGCTTT+GGG + chr5_1:19993934-19993953 Msa0722630:intron 20.0%
!! TAGTGAAATAAATTATGCAT+TGG + chr5_1:19994039-19994058 Msa0722630:intron 20.0%
!! CCAATTCATTTATAAAACAT+AGG - chr5_1:19994065-19994084 None:intergenic 20.0%
!!! CCTATGTTTTATAAATGAAT+TGG + chr5_1:19994062-19994081 Msa0722630:intron 20.0%
!!! AATAAGAGGATTTAAAATGA+AGG + chr5_1:19994167-19994186 Msa0722630:intron 20.0%
!!! ATAAGAGGATTTAAAATGAA+GGG + chr5_1:19994168-19994187 Msa0722630:intron 20.0%
!! TTATCAATTGTCATAATGTT+GGG + chr5_1:19994195-19994214 Msa0722630:intron 20.0%
!! ATCTTATTAAAAGAAAACAG+AGG - chr5_1:19994293-19994312 None:intergenic 20.0%
!!! AAATATTGTTGCTTCTAAAA+TGG + chr5_1:19994528-19994547 Msa0722630:intron 20.0%
!! TTCATATGTAAGTATCAAAA+TGG - chr5_1:19994984-19995003 None:intergenic 20.0%
!! AATTCATGTTTATAAGCAAA+TGG - chr5_1:19995138-19995157 None:intergenic 20.0%
!! TGCTTATAAACATGAATTTA+AGG + chr5_1:19995140-19995159 Msa0722630:intron 20.0%
!!! AATGCTTTTATTTCCTATAA+CGG + chr5_1:19995200-19995219 Msa0722630:intron 20.0%
!! AAAATTCAATGAACAACAAA+TGG - chr5_1:19995238-19995257 None:intergenic 20.0%
!! GTAATAAGAACTAAAGAATA+TGG - chr5_1:19995305-19995324 None:intergenic 20.0%
!! TTATTTATAGTCAGTAAGTT+AGG + chr5_1:19995521-19995540 Msa0722630:intron 20.0%
!!! CTTCTTAAATATGATTTTAC+AGG - chr5_1:19989516-19989535 None:intergenic 20.0%
!! CTGTAAAATCATATTTAAGA+AGG + chr5_1:19989514-19989533 Msa0722630:five_prime_UTR 20.0%
!! GTAAAATCATATTTAAGAAG+GGG + chr5_1:19989516-19989535 Msa0722630:five_prime_UTR 20.0%
!! TAAAATCATATTTAAGAAGG+GGG + chr5_1:19989517-19989536 Msa0722630:five_prime_UTR 20.0%
!! ACATAAAGAATATAAGAAGA+AGG - chr5_1:19996328-19996347 None:intergenic 20.0%
!!! ATAACTTTGATAACTTTCAA+CGG + chr5_1:19996811-19996830 Msa0722630:intron 20.0%
!!! ATGTATTAGCACAATTTTAT+TGG + chr5_1:19990226-19990245 Msa0722630:intron 20.0%
!!! TCTTTTGCTTTTTTATTTAG+AGG + chr5_1:19997093-19997112 Msa0722630:intron 20.0%
!!! CTTTTGCTTTTTTATTTAGA+GGG + chr5_1:19997094-19997113 Msa0722630:intron 20.0%
!!! TCTTTTCTTGAAAAAGAAAT+GGG - chr5_1:19997136-19997155 None:intergenic 20.0%
!!! ATCTTTTCTTGAAAAAGAAA+TGG - chr5_1:19997137-19997156 None:intergenic 20.0%
!! CAAAATAATTGTCCAATAAA+GGG - chr5_1:19990501-19990520 None:intergenic 20.0%
!! TCAAAATAATTGTCCAATAA+AGG - chr5_1:19990502-19990521 None:intergenic 20.0%
!!! AAGCATAATTCATTTTCAAA+AGG - chr5_1:19997905-19997924 None:intergenic 20.0%
!! AAAGGTAAAACAGTTAAAAA+AGG - chr5_1:19997959-19997978 None:intergenic 20.0%
!! AAACTTAAATCAAACAAAAC+TGG + chr5_1:19998297-19998316 Msa0722630:three_prime_UTR 20.0%
!!! TCTTTAGAAAATAAACTACT+TGG + chr5_1:19998397-19998416 Msa0722630:three_prime_UTR 20.0%
!! AATTTATCAAGAGTTAGATT+TGG + chr5_1:19998822-19998841 Msa0722630:three_prime_UTR 20.0%
!!! GTAATTTTGCTCATAAATTA+AGG + chr5_1:19998932-19998951 Msa0722630:three_prime_UTR 20.0%
!! ATATGAACATTGAAATAGTA+AGG + chr5_1:19999364-19999383 Msa0722630:three_prime_UTR 20.0%
!!! ATGAATTTTTAAGGAGAAAT+AGG - chr5_1:19999521-19999540 None:intergenic 20.0%
! AAGAATCTTAGATCTTAGAT+AGG - chr5_1:19987085-19987104 None:intergenic 25.0%
!! TTTTTATTGTAGATCTGGAT+GGG - chr5_1:19987114-19987133 None:intergenic 25.0%
!!! TTTTTTATTGTAGATCTGGA+TGG - chr5_1:19987115-19987134 None:intergenic 25.0%
!!! TTTTTTTTGTAGATCTGGAA+GGG - chr5_1:19987246-19987265 None:intergenic 25.0%
!!! TTTTTTTTTGTAGATCTGGA+AGG - chr5_1:19987247-19987266 None:intergenic 25.0%
! AAAGAACAATTAGGGAAAAA+AGG - chr5_1:19987471-19987490 None:intergenic 25.0%
! AACAAGCAAAAGAACAATTA+GGG - chr5_1:19987479-19987498 None:intergenic 25.0%
! AAACAAGCAAAAGAACAATT+AGG - chr5_1:19987480-19987499 None:intergenic 25.0%
! TCAGCATAACAAAGAATATT+TGG - chr5_1:19987699-19987718 None:intergenic 25.0%
! GTTGTAGAAAATATATAGAG+AGG + chr5_1:19987863-19987882 Msa0722630:intron 25.0%
! AAGAATTGAATTGTAGAAAG+GGG - chr5_1:19987977-19987996 None:intergenic 25.0%
!! GTTTCCAGATTTGAAATAAA+AGG - chr5_1:19988172-19988191 None:intergenic 25.0%
! GAAACACATCATATCTATTA+GGG + chr5_1:19988187-19988206 Msa0722630:intron 25.0%
! AAATTGAACGTATCTAAAAG+TGG + chr5_1:19988431-19988450 Msa0722630:intron 25.0%
! TATATAGTGACTATAAGCTT+AGG + chr5_1:19988459-19988478 Msa0722630:intron 25.0%
! TTAAATTCACATTCTTTCGA+GGG - chr5_1:19988529-19988548 None:intergenic 25.0%
!! AGTGATAATTTTCTACTGTT+AGG + chr5_1:19988959-19988978 Msa0722630:intron 25.0%
! GAATAAAACCAAAATCAACA+GGG - chr5_1:19989027-19989046 None:intergenic 25.0%
! AGAATAAAACCAAAATCAAC+AGG - chr5_1:19989028-19989047 None:intergenic 25.0%
!!! GTTGATTTTGGTTTTATTCT+TGG + chr5_1:19989028-19989047 Msa0722630:five_prime_UTR 25.0%
!! ACTTTAATTGTGTGATTTGT+GGG + chr5_1:19989167-19989186 Msa0722630:five_prime_UTR 25.0%
!! GAGAAATTGATTGATCTTTT+TGG + chr5_1:19989199-19989218 Msa0722630:five_prime_UTR 25.0%
! CAATATTACTTTACTTCAGT+TGG + chr5_1:19989385-19989404 Msa0722630:five_prime_UTR 25.0%
!!! CAATTGCTGTTTTAAAAGAA+AGG - chr5_1:19989487-19989506 None:intergenic 25.0%
!!! CTTTCTTTTAAAACAGCAAT+TGG + chr5_1:19989485-19989504 Msa0722630:five_prime_UTR 25.0%
!! ATTGGTTTAAAAAATTCCAG+AGG - chr5_1:19990182-19990201 None:intergenic 25.0%
! AAAATCTACATGATCATGTA+TGG - chr5_1:19990529-19990548 None:intergenic 25.0%
! TATAAATGTTTCAAGACAGT+TGG - chr5_1:19990684-19990703 None:intergenic 25.0%
! ACCAAGTATATATGTGATAA+CGG - chr5_1:19990726-19990745 None:intergenic 25.0%
! ATCACATATATACTTGGTAT+TGG + chr5_1:19990728-19990747 Msa0722630:five_prime_UTR 25.0%
!!! TATTTTTTGCCTAATAGTGA+TGG + chr5_1:19990781-19990800 Msa0722630:intron 25.0%
! AAAATATGACCATCACTATT+AGG - chr5_1:19990793-19990812 None:intergenic 25.0%
! TCACATTACCAATACAAAAT+AGG - chr5_1:19990828-19990847 None:intergenic 25.0%
!! TTCTTATTGACTATAACACA+AGG - chr5_1:19991010-19991029 None:intergenic 25.0%
! AATAAGAAATTTCTACAGTC+AGG + chr5_1:19991022-19991041 Msa0722630:intron 25.0%
!!! TTACTTTTTTTAAGCTTCTG+AGG + chr5_1:19991274-19991293 Msa0722630:intron 25.0%
!!! TGTTGTTTCTATTTTTCTCT+TGG + chr5_1:19991319-19991338 Msa0722630:intron 25.0%
! TTCTTGCTTTAATTCATTGA+TGG - chr5_1:19991465-19991484 None:intergenic 25.0%
! TTGTTAAAAGAGTAGAATTG+TGG - chr5_1:19991621-19991640 None:intergenic 25.0%
! AAATATATTATAGGGAGATG+AGG - chr5_1:19992134-19992153 None:intergenic 25.0%
! TATTTACTTATGTGTCTTAG+TGG + chr5_1:19992149-19992168 Msa0722630:intron 25.0%
!!! ATTAGTCTCAACAATGATTT+TGG - chr5_1:19992351-19992370 None:intergenic 25.0%
! TGTGCAGTTTATATGTATAA+TGG + chr5_1:19992404-19992423 Msa0722630:intron 25.0%
!!! CCTATTATTATTTTTCACAG+CGG + chr5_1:19992465-19992484 Msa0722630:intron 25.0%
! TTGAATAGGTAAACTAGATA+TGG - chr5_1:19992535-19992554 None:intergenic 25.0%
! ATATGAGTTAATGAATGTGT+AGG - chr5_1:19992789-19992808 None:intergenic 25.0%
!! CAATGATATTGTTATTGTCT+GGG + chr5_1:19992870-19992889 Msa0722630:intron 25.0%
!! GATTAATTTTTCCCATTTCT+GGG - chr5_1:19992897-19992916 None:intergenic 25.0%
!! AGTTTGATAATTTAACCAAC+TGG - chr5_1:19993224-19993243 None:intergenic 25.0%
!! AACGGTCACAATATTTTATT+TGG - chr5_1:19993516-19993535 None:intergenic 25.0%
! AACTAAGACAAATGAAGAAA+CGG - chr5_1:19993534-19993553 None:intergenic 25.0%
! AAAAAACAATTAGGGGAAAA+AGG - chr5_1:19993607-19993626 None:intergenic 25.0%
! TCAAAGCAAAAAACAATTAG+GGG - chr5_1:19993614-19993633 None:intergenic 25.0%
! GATCAAAGCAAAAAACAATT+AGG - chr5_1:19993616-19993635 None:intergenic 25.0%
!! TTGTTTACTCTTTTATGTCA+AGG + chr5_1:19993728-19993747 Msa0722630:intron 25.0%
! GATATTATGATATATCGCTT+TGG + chr5_1:19993933-19993952 Msa0722630:intron 25.0%
!! AAATCCTCTTATTTATCTAC+AGG - chr5_1:19994160-19994179 None:intergenic 25.0%
! CTTATCAATTGTCATAATGT+TGG + chr5_1:19994194-19994213 Msa0722630:intron 25.0%
! ATTGTAAGTTGTTGTAATCA+GGG + chr5_1:19994261-19994280 Msa0722630:intron 25.0%
!!! TTTTGAAAAAAAAGGTTTGC+TGG + chr5_1:19994438-19994457 Msa0722630:intron 25.0%
!! TTTGAAAAAAAAGGTTTGCT+GGG + chr5_1:19994439-19994458 Msa0722630:intron 25.0%
! TATGTGAAAGTAATCAAACA+TGG - chr5_1:19994614-19994633 None:intergenic 25.0%
! TGCATCAACAAAATTGAATA+TGG - chr5_1:19994658-19994677 None:intergenic 25.0%
! TCACAAAAGTTGTAATCAAA+TGG - chr5_1:19994811-19994830 None:intergenic 25.0%
!!! ACTTTACTTTTCTTTCTCAT+TGG + chr5_1:19994833-19994852 Msa0722630:intron 25.0%
! AAAACAATAGAGAGAGAAAA+AGG + chr5_1:19994859-19994878 Msa0722630:intron 25.0%
! TTATAAGCAAATGGTTAGAA+GGG - chr5_1:19995129-19995148 None:intergenic 25.0%
! TTTATAAGCAAATGGTTAGA+AGG - chr5_1:19995130-19995149 None:intergenic 25.0%
!!! ATGCTTTTATTTCCTATAAC+GGG + chr5_1:19995201-19995220 Msa0722630:intron 25.0%
!!! ATTTTGTTGTTATCTCTCTT+TGG + chr5_1:19995273-19995292 Msa0722630:intron 25.0%
!! ATTACGGAGTAGAAATATTT+TGG + chr5_1:19995465-19995484 Msa0722630:intron 25.0%
!! TTACGGAGTAGAAATATTTT+GGG + chr5_1:19995466-19995485 Msa0722630:intron 25.0%
!! TTATGATAATGATTGATGTG+TGG - chr5_1:19995585-19995604 None:intergenic 25.0%
! ATGTATCATTCATTTAAGCT+AGG - chr5_1:19996028-19996047 None:intergenic 25.0%
!! TTAATTATTGATGACTCTGA+GGG - chr5_1:19996191-19996210 None:intergenic 25.0%
!! TTTAATTATTGATGACTCTG+AGG - chr5_1:19996192-19996211 None:intergenic 25.0%
!!! CATTTGCTGTTTTAAAAGTA+AGG - chr5_1:19996235-19996254 None:intergenic 25.0%
!!! CTTACTTTTAAAACAGCAAA+TGG + chr5_1:19996233-19996252 Msa0722630:CDS 25.0%
!!! GTAAACCAGTATTTTTCAAT+TGG + chr5_1:19996985-19997004 Msa0722630:intron 25.0%
! ATTGTCCAATTGAAAAATAC+TGG - chr5_1:19996993-19997012 None:intergenic 25.0%
!! TCAGTTGCTTTGTTAATATT+GGG + chr5_1:19997185-19997204 Msa0722630:CDS 25.0%
!!! TCATGTCTTTATTTTATCAG+AGG + chr5_1:19997355-19997374 Msa0722630:intron 25.0%
! TATAAACATTTCAAGACAGT+TGG - chr5_1:19997447-19997466 None:intergenic 25.0%
! TCCATTATCACTTATATACT+TGG + chr5_1:19997485-19997504 Msa0722630:CDS 25.0%
! ACCAAGTATATAAGTGATAA+TGG - chr5_1:19997489-19997508 None:intergenic 25.0%
! ATCACTTATATACTTGGTAT+TGG + chr5_1:19997491-19997510 Msa0722630:CDS 25.0%
!!! TGATACTTGTTATTTTGTGT+TGG + chr5_1:19997570-19997589 Msa0722630:intron 25.0%
! TGTTGTAGATCAAATCAAAT+AGG - chr5_1:19997842-19997861 None:intergenic 25.0%
! AGAGAAAGTGGAAAAAAAAA+AGG - chr5_1:19997977-19997996 None:intergenic 25.0%
! ATAGATACATAAACTTGGTT+TGG + chr5_1:19998009-19998028 Msa0722630:three_prime_UTR 25.0%
! AGATCTTACAATCAAAATCA+AGG + chr5_1:19998612-19998631 Msa0722630:three_prime_UTR 25.0%
! TATGATATTTAGATCTCTCT+GGG - chr5_1:19998651-19998670 None:intergenic 25.0%
! GATCTAAATATCATAGAATC+TGG + chr5_1:19998656-19998675 Msa0722630:three_prime_UTR 25.0%
!!! TTAAAATTGTGTTTTGTTGC+AGG - chr5_1:19998685-19998704 None:intergenic 25.0%
!!! GATAGCATATGAGTTTTATA+AGG - chr5_1:19998740-19998759 None:intergenic 25.0%
! TTATGAGCAAAATTACACTA+GGG - chr5_1:19998928-19998947 None:intergenic 25.0%
! TTTATGAGCAAAATTACACT+AGG - chr5_1:19998929-19998948 None:intergenic 25.0%
!! ATTTTGCTCATAAATTAAGG+TGG + chr5_1:19998935-19998954 Msa0722630:three_prime_UTR 25.0%
! ATACAAACTTATCAATCAAG+AGG - chr5_1:19999220-19999239 None:intergenic 25.0%
!! TTCTTTATAAAGGGTACATT+GGG - chr5_1:19999255-19999274 None:intergenic 25.0%
!! ATTCTTTATAAAGGGTACAT+TGG - chr5_1:19999256-19999275 None:intergenic 25.0%
! TATTTCAATGTTCATATCCA+AGG - chr5_1:19999361-19999380 None:intergenic 25.0%
!!! ATTTTTAAGGAGAAATAGGA+GGG - chr5_1:19999517-19999536 None:intergenic 25.0%
!!! AATTTTTAAGGAGAAATAGG+AGG - chr5_1:19999518-19999537 None:intergenic 25.0%
! CTTTGAATTCATCATTTGTA+AGG - chr5_1:19999713-19999732 None:intergenic 25.0%
TCTTAGATCTTAGATAGGTT+AGG - chr5_1:19987080-19987099 None:intergenic 30.0%
! TTTTATTGTAGATCTGGATG+GGG - chr5_1:19987113-19987132 None:intergenic 30.0%
!!! TTTTTTTGTAGATCTGGAAG+GGG - chr5_1:19987245-19987264 None:intergenic 30.0%
CAGAGAAATTAAGAAAGACA+TGG - chr5_1:19987324-19987343 None:intergenic 30.0%
CATGTCTTTCTTAATTTCTC+TGG + chr5_1:19987322-19987341 Msa0722630:five_prime_UTR 30.0%
AAAACAGATGAAGAAGCAAT+CGG - chr5_1:19987379-19987398 None:intergenic 30.0%
TAGGGAAAAAAGGTTTATGT+CGG - chr5_1:19987461-19987480 None:intergenic 30.0%
! ATATTCTTTGTTATGCTGAC+TGG + chr5_1:19987700-19987719 Msa0722630:five_prime_UTR 30.0%
! TTTTCCATGATATATGCCTT+TGG + chr5_1:19987809-19987828 Msa0722630:intron 30.0%
TTTCCATGATATATGCCTTT+GGG + chr5_1:19987810-19987829 Msa0722630:intron 30.0%
ATGTATATTTCCATGGTTAG+AGG - chr5_1:19987891-19987910 None:intergenic 30.0%
TCTAACCATGGAAATATACA+TGG + chr5_1:19987890-19987909 Msa0722630:intron 30.0%
AAATGCCATGTATATTTCCA+TGG - chr5_1:19987898-19987917 None:intergenic 30.0%
TTCATATGTACATCTGAATG+AGG - chr5_1:19987937-19987956 None:intergenic 30.0%
!! TAGCCCTTTTATTTCAAATC+TGG + chr5_1:19988165-19988184 Msa0722630:intron 30.0%
GGAAACACATCATATCTATT+AGG + chr5_1:19988186-19988205 Msa0722630:intron 30.0%
!! AATTATGTATAGACGGGTTT+TGG + chr5_1:19988260-19988279 Msa0722630:intron 30.0%
TAAATTCACATTCTTTCGAG+GGG - chr5_1:19988528-19988547 None:intergenic 30.0%
CTTAAATTCACATTCTTTCG+AGG - chr5_1:19988530-19988549 None:intergenic 30.0%
GATGTTCAAATCAACTATCA+AGG - chr5_1:19988603-19988622 None:intergenic 30.0%
AAAAACATTATCCAAGAGGA+AGG - chr5_1:19988653-19988672 None:intergenic 30.0%
! ATTCTACTTCTGGCAATTTT+CGG + chr5_1:19988688-19988707 Msa0722630:intron 30.0%
ATAAAAAAAAACACAGGCAG+AGG - chr5_1:19988819-19988838 None:intergenic 30.0%
AAATTGGCATGTTACATTCT+AGG + chr5_1:19988908-19988927 Msa0722630:intron 30.0%
TTGGGGAGAAATAATAGATT+TGG - chr5_1:19988934-19988953 None:intergenic 30.0%
! TTTTCTACTGTTAGGTTACT+TGG + chr5_1:19988967-19988986 Msa0722630:intron 30.0%
AAGGAAAAAGGTTTAAGCTA+TGG + chr5_1:19989094-19989113 Msa0722630:five_prime_UTR 30.0%
AGGAAAAAGGTTTAAGCTAT+GGG + chr5_1:19989095-19989114 Msa0722630:five_prime_UTR 30.0%
CACTTTAATTGTGTGATTTG+TGG + chr5_1:19989166-19989185 Msa0722630:five_prime_UTR 30.0%
! AAATTTGTACACCTGTTTTC+AGG + chr5_1:19989319-19989338 Msa0722630:five_prime_UTR 30.0%
! TTAGATATTGATGACTCTGA+AGG - chr5_1:19989443-19989462 None:intergenic 30.0%
! AGAATATAAGAAGGTTTTGC+AGG - chr5_1:19989571-19989590 None:intergenic 30.0%
AGCAAACACAGAATATAAGA+AGG - chr5_1:19989580-19989599 None:intergenic 30.0%
CAAACTCTATCTCATGAATT+TGG + chr5_1:19989671-19989690 Msa0722630:five_prime_UTR 30.0%
GAATTTGGAGATGGATATTA+CGG + chr5_1:19989686-19989705 Msa0722630:five_prime_UTR 30.0%
! ACATAAATATGAAGGCATGT+TGG + chr5_1:19989725-19989744 Msa0722630:five_prime_UTR 30.0%
TGTTCAAATGGTATCGTTAA+TGG + chr5_1:19989749-19989768 Msa0722630:five_prime_UTR 30.0%
CATACAATCTTCTATCAACT+GGG + chr5_1:19989814-19989833 Msa0722630:five_prime_UTR 30.0%
! TGCTTTGTCTTTTTGTAACT+TGG + chr5_1:19989931-19989950 Msa0722630:intron 30.0%
TATTTCTTGTCAAAGAACCT+CGG + chr5_1:19990011-19990030 Msa0722630:intron 30.0%
TAAGCAGATATGAAATACGA+GGG - chr5_1:19990067-19990086 None:intergenic 30.0%
CAGAAAATGTTAAAAACCTC+TGG + chr5_1:19990163-19990182 Msa0722630:intron 30.0%
ACTGTCCATTTGAAAAACAT+TGG - chr5_1:19990200-19990219 None:intergenic 30.0%
!!! TCAGTTGGTAGTTTCTTTTT+GGG + chr5_1:19990402-19990421 Msa0722630:intron 30.0%
AATAATTGTCCAATAAAGGG+AGG - chr5_1:19990498-19990517 None:intergenic 30.0%
TTACATATTAGTCAAGCAAC+TGG - chr5_1:19990567-19990586 None:intergenic 30.0%
GATAAAATCTAGACATCAGA+AGG - chr5_1:19990590-19990609 None:intergenic 30.0%
ACATTTATAAAAAGCTGTGC+TGG + chr5_1:19990695-19990714 Msa0722630:five_prime_UTR 30.0%
TCCGTTATCACATATATACT+TGG + chr5_1:19990722-19990741 Msa0722630:five_prime_UTR 30.0%
!! GTGATGGTCATATTTTGTTT+TGG + chr5_1:19990797-19990816 Msa0722630:intron 30.0%
! TGGTACTTCCTATTTTGTAT+TGG + chr5_1:19990817-19990836 Msa0722630:intron 30.0%
!!! TTGTTTTGATTGGGTAGATT+TGG + chr5_1:19990921-19990940 Msa0722630:intron 30.0%
CTAAAGGAAACTGAGAAAAT+TGG - chr5_1:19991184-19991203 None:intergenic 30.0%
! GAAAATGTCTATTTCTCTGT+TGG + chr5_1:19991296-19991315 Msa0722630:intron 30.0%
! TTTTGTAATCTTGTGTGAAC+AGG + chr5_1:19991556-19991575 Msa0722630:intron 30.0%
TACAAAATACTGCATCACTT+AGG + chr5_1:19992320-19992339 Msa0722630:intron 30.0%
CCGCTGTGAAAAATAATAAT+AGG - chr5_1:19992468-19992487 None:intergenic 30.0%
AAATGTAATTCAAATGCGTG+TGG + chr5_1:19992553-19992572 Msa0722630:intron 30.0%
AATGTAATTCAAATGCGTGT+GGG + chr5_1:19992554-19992573 Msa0722630:intron 30.0%
TTAGAAATGTAGGATGCTTA+AGG - chr5_1:19992595-19992614 None:intergenic 30.0%
! ATATCATTGGTTGAAGCTAT+AGG - chr5_1:19992859-19992878 None:intergenic 30.0%
CCAGACAATAACAATATCAT+TGG - chr5_1:19992872-19992891 None:intergenic 30.0%
! CCAATGATATTGTTATTGTC+TGG + chr5_1:19992869-19992888 Msa0722630:intron 30.0%
! GGATTAATTTTTCCCATTTC+TGG - chr5_1:19992898-19992917 None:intergenic 30.0%
TATACTAGGGAAACCATATA+TGG - chr5_1:19993026-19993045 None:intergenic 30.0%
CTCTGATCATAGATATACTA+GGG - chr5_1:19993039-19993058 None:intergenic 30.0%
ACTCTGATCATAGATATACT+AGG - chr5_1:19993040-19993059 None:intergenic 30.0%
TTCATTTCCACTTATGAAAC+TGG + chr5_1:19993160-19993179 Msa0722630:intron 30.0%
TTGCACAGCATATAATCTAT+TGG + chr5_1:19993428-19993447 Msa0722630:intron 30.0%
TCTCAGACATCAAAGAAAAA+CGG - chr5_1:19993828-19993847 None:intergenic 30.0%
AATTTCTTCGTTGTGTTGAA+TGG + chr5_1:19993863-19993882 Msa0722630:CDS 30.0%
! ATCCTGTCTTATTCATCAAT+GGG + chr5_1:19994003-19994022 Msa0722630:intron 30.0%
CATTGTAAGTTGTTGTAATC+AGG + chr5_1:19994260-19994279 Msa0722630:intron 30.0%
TAAAAATGTTAGTGGTCTAG+TGG - chr5_1:19994505-19994524 None:intergenic 30.0%
!! TAGCTTAAAAAGAGGCATTT+AGG - chr5_1:19994563-19994582 None:intergenic 30.0%
AGTGTTAGTAGCTTAAAAAG+AGG - chr5_1:19994571-19994590 None:intergenic 30.0%
ATAAGTACATCATGTGAGTA+TGG + chr5_1:19994892-19994911 Msa0722630:intron 30.0%
TAAGTACATCATGTGAGTAT+GGG + chr5_1:19994893-19994912 Msa0722630:intron 30.0%
GTACAAAAGTTGTCATAAGA+TGG + chr5_1:19994926-19994945 Msa0722630:intron 30.0%
AGCTGTAGAAATTTCAATAC+TGG + chr5_1:19995333-19995352 Msa0722630:CDS 30.0%
!! TTCAATACTGGTTTCATAAC+AGG + chr5_1:19995345-19995364 Msa0722630:CDS 30.0%
AAAACAAGCACTAGAATTGA+CGG + chr5_1:19995372-19995391 Msa0722630:CDS 30.0%
TGAAAGTGAAGAGGTAATTA+CGG + chr5_1:19995449-19995468 Msa0722630:intron 30.0%
GCTTAAATGAATGATACATC+TGG + chr5_1:19996029-19996048 Msa0722630:intron 30.0%
!!! ACTTTTAAAACAGCAAATGG+CGG + chr5_1:19996236-19996255 Msa0722630:CDS 30.0%
! ATATAAGAAGAAGGTTTTGC+AGG - chr5_1:19996319-19996338 None:intergenic 30.0%
TCTTTATGTATGCTTGCAAT+TGG + chr5_1:19996339-19996358 Msa0722630:intron 30.0%
! CTTTTTGTAGGTTACTCAAA+TGG + chr5_1:19996508-19996527 Msa0722630:intron 30.0%
TACTCAAATGGTATCGTTAA+TGG + chr5_1:19996520-19996539 Msa0722630:CDS 30.0%
! TGCTTTGTCTTATTGTAACT+TGG + chr5_1:19996687-19996706 Msa0722630:intron 30.0%
GATATTTCTTGTCAAAGACT+TGG + chr5_1:19996725-19996744 Msa0722630:intron 30.0%
TGTAAGCAGATATGAAATGA+AGG - chr5_1:19996891-19996910 None:intergenic 30.0%
ACATGCATTTGTATTCAATG+AGG - chr5_1:19997166-19997185 None:intergenic 30.0%
! GTCAGTTGCTTTGTTAATAT+TGG + chr5_1:19997184-19997203 Msa0722630:CDS 30.0%
TTACATAATAGTCAAGCAAC+TGG - chr5_1:19997330-19997349 None:intergenic 30.0%
!!! GATCAGTTTCATCTTTTTTC+TGG + chr5_1:19997705-19997724 Msa0722630:three_prime_UTR 30.0%
! TTTTAAGCAAACAGAGAAAG+TGG - chr5_1:19997989-19998008 None:intergenic 30.0%
AGTGACAGAACTTAAGAATA+AGG - chr5_1:19998169-19998188 None:intergenic 30.0%
! CTTTTCAATGTTAAGGACTA+CGG - chr5_1:19998452-19998471 None:intergenic 30.0%
!!! AAAGGCACTTTTCAATGTTA+AGG - chr5_1:19998459-19998478 None:intergenic 30.0%
CTATGATATTTAGATCTCTC+TGG - chr5_1:19998652-19998671 None:intergenic 30.0%
TAGATTTGGAAAAAGAATGC+AGG + chr5_1:19998836-19998855 Msa0722630:three_prime_UTR 30.0%
!! CAATATTTCAAGTTGAACCT+TGG - chr5_1:19999060-19999079 None:intergenic 30.0%
TATCATACGGTTCAACTTAT+GGG - chr5_1:19999099-19999118 None:intergenic 30.0%
ATATCATACGGTTCAACTTA+TGG - chr5_1:19999100-19999119 None:intergenic 30.0%
GTATGATAGCACATATCATA+CGG - chr5_1:19999112-19999131 None:intergenic 30.0%
! TAATGCCATTTACCTAATGA+GGG - chr5_1:19999665-19999684 None:intergenic 30.0%
! ATAATGCCATTTACCTAATG+AGG - chr5_1:19999666-19999685 None:intergenic 30.0%
CATTAGGTAAATGGCATTAT+TGG + chr5_1:19999666-19999685 Msa0722630:intron 30.0%
! TGTTGACTAACTTTGAATGA+AGG - chr5_1:19999765-19999784 None:intergenic 30.0%
TTAGATAGGTTAGGTTACAG+AGG - chr5_1:19987071-19987090 None:intergenic 35.0%
ATTTCTCTTCTTCTGACGAT+AGG + chr5_1:19987170-19987189 Msa0722630:intron 35.0%
ATCCATGATAGAACGGAAAA+AGG + chr5_1:19987199-19987218 Msa0722630:intron 35.0%
! ATCCTTTTTCCGTTCTATCA+TGG - chr5_1:19987204-19987223 None:intergenic 35.0%
! GATATGTTTGAAGCTCTTGA+TGG + chr5_1:19987746-19987765 Msa0722630:intron 35.0%
! AAACCCAAAGGCATATATCA+TGG - chr5_1:19987816-19987835 None:intergenic 35.0%
ATGTATGAGTAGAAACCCAA+AGG - chr5_1:19987828-19987847 None:intergenic 35.0%
! AGTGGTTGTTCAGATTTTCA+TGG - chr5_1:19988005-19988024 None:intergenic 35.0%
!! TAGCCTTTTTCTCTGAAAAG+TGG + chr5_1:19988104-19988123 Msa0722630:intron 35.0%
TTGGATCTTTATCATGGCAT+AGG + chr5_1:19988279-19988298 Msa0722630:intron 35.0%
GTGTTAAGAGTGAAAAATCG+TGG - chr5_1:19988319-19988338 None:intergenic 35.0%
AGCTCAAAATTGCAAAGTAC+AGG + chr5_1:19988346-19988365 Msa0722630:intron 35.0%
TGACTATAAGCTTAGGCTTT+GGG + chr5_1:19988466-19988485 Msa0722630:intron 35.0%
! TTATCCTTTTTCCTTCCTCT+TGG + chr5_1:19988639-19988658 Msa0722630:intron 35.0%
TTATCCAAGAGGAAGGAAAA+AGG - chr5_1:19988646-19988665 None:intergenic 35.0%
! GCTTTTTGACATTCTACTTC+TGG + chr5_1:19988678-19988697 Msa0722630:intron 35.0%
AAAGACTTCAATGGTCTCTT+AGG - chr5_1:19989003-19989022 None:intergenic 35.0%
!!! AGTCTTTTCCCTGTTGATTT+TGG + chr5_1:19989016-19989035 Msa0722630:five_prime_UTR 35.0%
AAAAAGGTTTAAGCTATGGG+TGG + chr5_1:19989098-19989117 Msa0722630:five_prime_UTR 35.0%
CTGAAAAGCAAATATCCCAT+TGG + chr5_1:19989123-19989142 Msa0722630:five_prime_UTR 35.0%
TCTGACGTTAATCATCCAAT+GGG - chr5_1:19989141-19989160 None:intergenic 35.0%
ATCTGACGTTAATCATCCAA+TGG - chr5_1:19989142-19989161 None:intergenic 35.0%
TACATGTATACCAACTGCAA+AGG - chr5_1:19989275-19989294 None:intergenic 35.0%
! ACTTGCAACATTTTTCCACA+CGG + chr5_1:19989294-19989313 Msa0722630:five_prime_UTR 35.0%
TAAAGCACAAACCTGAAAAC+AGG - chr5_1:19989333-19989352 None:intergenic 35.0%
!!! GTTTTAAAAGAAAGGCACAG+AGG - chr5_1:19989479-19989498 None:intergenic 35.0%
CTATCTCATGAATTTGGAGA+TGG + chr5_1:19989677-19989696 Msa0722630:five_prime_UTR 35.0%
!! CCAGTTGATAGAAGATTGTA+TGG - chr5_1:19989816-19989835 None:intergenic 35.0%
CCATACAATCTTCTATCAAC+TGG + chr5_1:19989813-19989832 Msa0722630:five_prime_UTR 35.0%
GTAAGCAGATATGAAATACG+AGG - chr5_1:19990068-19990087 None:intergenic 35.0%
GCATTCGTATTCATTGTATG+AGG - chr5_1:19990379-19990398 None:intergenic 35.0%
!!! GTCAGTTGGTAGTTTCTTTT+TGG + chr5_1:19990401-19990420 Msa0722630:intron 35.0%
!!! CAGTTGGTAGTTTCTTTTTG+GGG + chr5_1:19990403-19990422 Msa0722630:intron 35.0%
! TGGGGTTGCTTTGATAATAT+TGG + chr5_1:19990421-19990440 Msa0722630:intron 35.0%
! GGGGTTGCTTTGATAATATT+GGG + chr5_1:19990422-19990441 Msa0722630:intron 35.0%
! AATTTTCATCCCGATGATCA+TGG + chr5_1:19990641-19990660 Msa0722630:five_prime_UTR 35.0%
! ATATACTTGGTATTGGAGAC+AGG + chr5_1:19990735-19990754 Msa0722630:five_prime_UTR 35.0%
!!! TGGCATTGGTTGTTTTGATT+GGG + chr5_1:19990912-19990931 Msa0722630:intron 35.0%
GGATATAGTCAACCAGAAAA+CGG + chr5_1:19990949-19990968 Msa0722630:intron 35.0%
GATATAGTCAACCAGAAAAC+GGG + chr5_1:19990950-19990969 Msa0722630:intron 35.0%
ATATAGTCAACCAGAAAACG+GGG + chr5_1:19990951-19990970 Msa0722630:intron 35.0%
! TTTTCCCTTACTCTTGGATA+GGG + chr5_1:19991131-19991150 Msa0722630:intron 35.0%
TAATCTTGTGTGAACAGGTT+TGG + chr5_1:19991561-19991580 Msa0722630:intron 35.0%
AATCTTGTGTGAACAGGTTT+GGG + chr5_1:19991562-19991581 Msa0722630:intron 35.0%
AACAAAAAACAGCTCAAGAC+TGG + chr5_1:19991639-19991658 Msa0722630:five_prime_UTR 35.0%
ACAAAAAACAGCTCAAGACT+GGG + chr5_1:19991640-19991659 Msa0722630:five_prime_UTR 35.0%
GAAGCAAAAGCTTAGACTTT+GGG + chr5_1:19991662-19991681 Msa0722630:five_prime_UTR 35.0%
AAGCAAAAGCTTAGACTTTG+GGG + chr5_1:19991663-19991682 Msa0722630:five_prime_UTR 35.0%
TGCACATTATTAACCTTTCC+AGG - chr5_1:19991726-19991745 None:intergenic 35.0%
! CTTTTGAATAAGTATGAGCG+AGG + chr5_1:19991889-19991908 Msa0722630:intron 35.0%
!!! ACCACATAGTTTTGAATGTG+AGG - chr5_1:19991945-19991964 None:intergenic 35.0%
CATTCAAAACTATGTGGTTG+TGG + chr5_1:19991947-19991966 Msa0722630:intron 35.0%
AACTAAGAGGTAAGAATACC+TGG - chr5_1:19992004-19992023 None:intergenic 35.0%
TAGTTGTGACACTTCCTAAA+AGG + chr5_1:19992019-19992038 Msa0722630:intron 35.0%
!! GATTTTTCAGTCTTTGACCA+GGG - chr5_1:19992072-19992091 None:intergenic 35.0%
!! TGATTTTTCAGTCTTTGACC+AGG - chr5_1:19992073-19992092 None:intergenic 35.0%
GCATAAAGGCAGAATACATT+GGG - chr5_1:19992216-19992235 None:intergenic 35.0%
CAATGTATTCTGCCTTTATG+CGG + chr5_1:19992215-19992234 Msa0722630:intron 35.0%
CTATTTGATAGACCGCATAA+AGG - chr5_1:19992230-19992249 None:intergenic 35.0%
ATGCTTAAGGTTGCATTCAA+GGG - chr5_1:19992582-19992601 None:intergenic 35.0%
ATAGACCATCACAGTTATTG+AGG + chr5_1:19992634-19992653 Msa0722630:intron 35.0%
TCCTATCCTACATAACATAC+TGG + chr5_1:19992659-19992678 Msa0722630:intron 35.0%
ACCAGTATGTTATGTAGGAT+AGG - chr5_1:19992663-19992682 None:intergenic 35.0%
TAGACACCAGTATGTTATGT+AGG - chr5_1:19992668-19992687 None:intergenic 35.0%
ATCAGTACCAATAACTTCAG+GGG - chr5_1:19992712-19992731 None:intergenic 35.0%
CATCAGTACCAATAACTTCA+GGG - chr5_1:19992713-19992732 None:intergenic 35.0%
ACATCAGTACCAATAACTTC+AGG - chr5_1:19992714-19992733 None:intergenic 35.0%
AGGAGATGGCAACAAAAAAT+TGG - chr5_1:19992839-19992858 None:intergenic 35.0%
TTTAACTGTTTGTGCTCAGA+GGG - chr5_1:19992919-19992938 None:intergenic 35.0%
TGAGCACAAACAGTTAAAGT+TGG + chr5_1:19992921-19992940 Msa0722630:intron 35.0%
TACTTTCTCTCATTTGAGCT+TGG - chr5_1:19992986-19993005 None:intergenic 35.0%
TAAACTTCCACGTCCATATA+TGG + chr5_1:19993010-19993029 Msa0722630:intron 35.0%
TTACCTTACAGTGCTTCAAA+TGG + chr5_1:19993075-19993094 Msa0722630:intron 35.0%
!! TAACCATTTGAAGCACTGTA+AGG - chr5_1:19993081-19993100 None:intergenic 35.0%
TCACAATCCAGTTTCATAAG+TGG - chr5_1:19993170-19993189 None:intergenic 35.0%
!! GGTAACAACAATCACTTTTC+TGG - chr5_1:19993564-19993583 None:intergenic 35.0%
TAAGAAAAGTTGCTCGACAA+TGG - chr5_1:19993638-19993657 None:intergenic 35.0%
! TATTGAAGTATCCTCCAACA+AGG + chr5_1:19993764-19993783 Msa0722630:five_prime_UTR 35.0%
TTTCTTTGATGTCTGAGAAG+AGG + chr5_1:19993830-19993849 Msa0722630:exon 35.0%
TTCTTTGATGTCTGAGAAGA+GGG + chr5_1:19993831-19993850 Msa0722630:exon 35.0%
TGATGAATAAGACAGGATGT+AGG - chr5_1:19994001-19994020 None:intergenic 35.0%
! CATCCTGTCTTATTCATCAA+TGG + chr5_1:19994002-19994021 Msa0722630:intron 35.0%
TTCCCATTGATGAATAAGAC+AGG - chr5_1:19994008-19994027 None:intergenic 35.0%
GATTAATCAGGGAGTTAGTA+AGG + chr5_1:19994117-19994136 Msa0722630:intron 35.0%
GGAGTTAGTAAGGAGAAATT+AGG + chr5_1:19994127-19994146 Msa0722630:intron 35.0%
GTTGCCTGTAGATAAATAAG+AGG + chr5_1:19994153-19994172 Msa0722630:intron 35.0%
GTCATAATGTTGGGTTCTTT+CGG + chr5_1:19994204-19994223 Msa0722630:intron 35.0%
! TAAGATTTGACTCGTGATGA+AGG - chr5_1:19994334-19994353 None:intergenic 35.0%
TAGGGTTAAACAGGATTGAT+TGG - chr5_1:19994386-19994405 None:intergenic 35.0%
TTATTTAGACCCGCCAAAAA+GGG - chr5_1:19994415-19994434 None:intergenic 35.0%
ATTATTTAGACCCGCCAAAA+AGG - chr5_1:19994416-19994435 None:intergenic 35.0%
!! TCTAAGGTGTTGTTATTGGT+AGG - chr5_1:19994475-19994494 None:intergenic 35.0%
!! AAGCTCTAAGGTGTTGTTAT+TGG - chr5_1:19994479-19994498 None:intergenic 35.0%
AACTAAGTGATGATAGAGAG+TGG - chr5_1:19994724-19994743 None:intergenic 35.0%
CTACAAGAGTAGAAACTCTT+TGG - chr5_1:19995054-19995073 None:intergenic 35.0%
! GTTGTGGAGAGTATATAGAA+AGG + chr5_1:19995101-19995120 Msa0722630:intron 35.0%
!!! CATTGCCTGGTATCTTTTTT+GGG + chr5_1:19995163-19995182 Msa0722630:intron 35.0%
GAAATCCCAAAAAAGATACC+AGG - chr5_1:19995171-19995190 None:intergenic 35.0%
! GAAAAGTCTTTTCCCGTTAT+AGG - chr5_1:19995216-19995235 None:intergenic 35.0%
AAACAAGCACTAGAATTGAC+GGG + chr5_1:19995373-19995392 Msa0722630:CDS 35.0%
!! TCCAGTTTTTGAAAGTGAAG+AGG + chr5_1:19995440-19995459 Msa0722630:CDS 35.0%
ACCTCTTCACTTTCAAAAAC+TGG - chr5_1:19995444-19995463 None:intergenic 35.0%
GATAATGATTGATGTGTGGA+AGG - chr5_1:19995581-19995600 None:intergenic 35.0%
AGAGCGAAAATTATGTAACC+TGG + chr5_1:19995733-19995752 Msa0722630:intron 35.0%
ATGTACTTTCACTTCTCAGA+TGG + chr5_1:19995759-19995778 Msa0722630:intron 35.0%
TGTACTTTCACTTCTCAGAT+GGG + chr5_1:19995760-19995779 Msa0722630:intron 35.0%
! AGGAAGATGGATTTAAACGT+TGG + chr5_1:19995800-19995819 Msa0722630:CDS 35.0%
AACGTTGGAAGAGTTTAGTA+CGG + chr5_1:19995815-19995834 Msa0722630:CDS 35.0%
TCTTCTTCTGTGTATTACCT+CGG - chr5_1:19995894-19995913 None:intergenic 35.0%
TGAACTTACCTACTTTGACA+AGG + chr5_1:19995948-19995967 Msa0722630:CDS 35.0%
TACCTACTTTGACAAGGTAT+TGG + chr5_1:19995954-19995973 Msa0722630:intron 35.0%
! ATTGGTCTAAGATGATGTTG+TGG + chr5_1:19995972-19995991 Msa0722630:intron 35.0%
GACGTATACTTATTGATGCT+AGG + chr5_1:19996105-19996124 Msa0722630:intron 35.0%
!!! GTTTTAAAAGTAAGGCGCAA+AGG - chr5_1:19996227-19996246 None:intergenic 35.0%
CACACTCTATCTCATGAATT+TGG + chr5_1:19996439-19996458 Msa0722630:intron 35.0%
GAATTTGGAGATAGATGTTC+AGG + chr5_1:19996454-19996473 Msa0722630:intron 35.0%
! CTCTCTTTTCTTCCCTTTAT+TGG + chr5_1:19997249-19997268 Msa0722630:intron 35.0%
! AATTTTCATCCCGATGATCA+TGG + chr5_1:19990641-19990660 Msa0722630:five_prime_UTR 35.0%
ATGTTTATACTAAGCTGTGC+TGG + chr5_1:19997458-19997477 Msa0722630:CDS 35.0%
! ATATACTTGGTATTGGAAGC+AGG + chr5_1:19997498-19997517 Msa0722630:CDS 35.0%
CAATGAAACCCAACAGATAT+TGG - chr5_1:19997628-19997647 None:intergenic 35.0%
!!! TCTTTTTTCTGGCAATTGTG+TGG + chr5_1:19997716-19997735 Msa0722630:three_prime_UTR 35.0%
CCAGGTTAGAGAAAAACTAA+CGG - chr5_1:19998081-19998100 None:intergenic 35.0%
GAATGTAATTAGAGCTTACC+AGG - chr5_1:19998099-19998118 None:intergenic 35.0%
! AAATTATGTGCCAGTTCTGA+TGG - chr5_1:19998521-19998540 None:intergenic 35.0%
TTGTAAGATCTAACACAGTG+AGG - chr5_1:19998603-19998622 None:intergenic 35.0%
TCACTGTTGTTCCATAAGAA+AGG - chr5_1:19999000-19999019 None:intergenic 35.0%
TTGAACCTTGGTTTATGCTT+CGG - chr5_1:19999048-19999067 None:intergenic 35.0%
ATGATATGTGCTATCATACG+AGG + chr5_1:19999113-19999132 Msa0722630:three_prime_UTR 35.0%
! TTCCATAAGTTGAATGCGTA+TGG + chr5_1:19999186-19999205 Msa0722630:three_prime_UTR 35.0%
TTCCATACGCATTCAACTTA+TGG - chr5_1:19999191-19999210 None:intergenic 35.0%
! TAAGTTGAATGCGTATGGAA+AGG + chr5_1:19999191-19999210 Msa0722630:three_prime_UTR 35.0%
AAGTTGAATGCGTATGGAAA+GGG + chr5_1:19999192-19999211 Msa0722630:three_prime_UTR 35.0%
! ATAAAGGGTACATTGGGAAT+TGG - chr5_1:19999249-19999268 None:intergenic 35.0%
ATATATATGCAGTCCTATGG+TGG - chr5_1:19999436-19999455 None:intergenic 35.0%
TGGATATATATGCAGTCCTA+TGG - chr5_1:19999439-19999458 None:intergenic 35.0%
TTCTTTATAGTATCACACCC+TGG + chr5_1:19999561-19999580 Msa0722630:intron 35.0%
TATAGGACATTCATACGTGA+AGG - chr5_1:19999592-19999611 None:intergenic 35.0%
GCTGGAATAGCTTACATTAT+AGG - chr5_1:19999609-19999628 None:intergenic 35.0%
CTCTTCATCAACTTATTTGC+TGG - chr5_1:19999627-19999646 None:intergenic 35.0%
!! CAGCAAATAAGTTGATGAAG+AGG + chr5_1:19999625-19999644 Msa0722630:intron 35.0%
TGCAAATTACTACCCTCATT+AGG + chr5_1:19999650-19999669 Msa0722630:intron 35.0%
TACTACCCTCATTAGGTAAA+TGG + chr5_1:19999657-19999676 Msa0722630:intron 35.0%
TGACTAACTTTGAATGAAGG+TGG - chr5_1:19999762-19999781 None:intergenic 35.0%
GCGAGTTATCCATGATAGAA+CGG + chr5_1:19987192-19987211 Msa0722630:intron 40.0%
TGTGTCAAGATCCATCAACT+AGG + chr5_1:19987600-19987619 Msa0722630:intron 40.0%
TCTCAAACACCAGAGAAAAG+CGG - chr5_1:19987664-19987683 None:intergenic 40.0%
!!! AGGCCACTTTTCAGAGAAAA+AGG - chr5_1:19988110-19988129 None:intergenic 40.0%
!!! CGGGTTTTGGATCTTTATCA+TGG + chr5_1:19988273-19988292 Msa0722630:intron 40.0%
TATCATGGCATAGGATTGAG+TGG + chr5_1:19988288-19988307 Msa0722630:intron 40.0%
GTGACTATAAGCTTAGGCTT+TGG + chr5_1:19988465-19988484 Msa0722630:intron 40.0%
TGGGCATTAAAAGAAGCAGA+TGG + chr5_1:19988485-19988504 Msa0722630:intron 40.0%
GGGCATTAAAAGAAGCAGAT+GGG + chr5_1:19988486-19988505 Msa0722630:intron 40.0%
CAACAGGGAAAAGACTTCAA+TGG - chr5_1:19989012-19989031 None:intergenic 40.0%
!!! TTTGGTTTTATTCTTGGGCG+TGG + chr5_1:19989034-19989053 Msa0722630:five_prime_UTR 40.0%
ATTGACAGTGGAAATGGCTT+AGG - chr5_1:19989064-19989083 None:intergenic 40.0%
AGCTTCATTGACAGTGGAAA+TGG - chr5_1:19989070-19989089 None:intergenic 40.0%
ATGAAGCTCTGCAAGGAAAA+AGG + chr5_1:19989082-19989101 Msa0722630:five_prime_UTR 40.0%
! CTTGCAACATTTTTCCACAC+GGG + chr5_1:19989295-19989314 Msa0722630:five_prime_UTR 40.0%
! TTGCAACATTTTTCCACACG+GGG + chr5_1:19989296-19989315 Msa0722630:five_prime_UTR 40.0%
CATCTTGAAAGAGCTGATGA+TGG + chr5_1:19989355-19989374 Msa0722630:five_prime_UTR 40.0%
AGACTCTTCGGTTCATCATT+GGG + chr5_1:19989411-19989430 Msa0722630:five_prime_UTR 40.0%
ATTCTGTGTTTGCTCGCAAT+TGG + chr5_1:19989586-19989605 Msa0722630:five_prime_UTR 40.0%
GTTTGTGTGTCAAAGCACAT+AGG - chr5_1:19989656-19989675 None:intergenic 40.0%
! AGGCATGTTGGTTGTTCAAA+TGG + chr5_1:19989737-19989756 Msa0722630:five_prime_UTR 40.0%
GATTGTATGGCGTTAAATGC+AGG - chr5_1:19989803-19989822 None:intergenic 40.0%
TCCATCCTATTCATTGATGC+AGG + chr5_1:19989863-19989882 Msa0722630:five_prime_UTR 40.0%
ACCTGCATCAATGAATAGGA+TGG - chr5_1:19989867-19989886 None:intergenic 40.0%
TCCTATTCATTGATGCAGGT+CGG + chr5_1:19989867-19989886 Msa0722630:intron 40.0%
GAATACGAATGCATGTCAGT+TGG + chr5_1:19990387-19990406 Msa0722630:intron 40.0%
GTCCAATAAAGGGAGGAAAA+GGG - chr5_1:19990491-19990510 None:intergenic 40.0%
TGTCCAATAAAGGGAGGAAA+AGG - chr5_1:19990492-19990511 None:intergenic 40.0%
TCCAAAAGGTCCATGATCAT+CGG - chr5_1:19990654-19990673 None:intergenic 40.0%
CAGTTGGCTGTAATTCCAAA+AGG - chr5_1:19990668-19990687 None:intergenic 40.0%
TATTGGTGCAACTGTGCAAA+TGG - chr5_1:19990858-19990877 None:intergenic 40.0%
AGTTGCACCAATATCTTCCA+AGG + chr5_1:19990865-19990884 Msa0722630:intron 40.0%
! ACCACCATTTTACAAGGTGT+GGG - chr5_1:19990893-19990912 None:intergenic 40.0%
! AATGCCACCACCATTTTACA+AGG - chr5_1:19990899-19990918 None:intergenic 40.0%
!! TTGTAAAATGGTGGTGGCAT+TGG + chr5_1:19990898-19990917 Msa0722630:intron 40.0%
!!! GTGGCATTGGTTGTTTTGAT+TGG + chr5_1:19990911-19990930 Msa0722630:intron 40.0%
!! TTTCTGGTTGACTATATCCC+TGG - chr5_1:19990948-19990967 None:intergenic 40.0%
TATAGTCAACCAGAAAACGG+GGG + chr5_1:19990952-19990971 Msa0722630:intron 40.0%
! CTATCCTTTTCCCTTACTCT+TGG + chr5_1:19991125-19991144 Msa0722630:intron 40.0%
CTATCCAAGAGTAAGGGAAA+AGG - chr5_1:19991132-19991151 None:intergenic 40.0%
! CTTTTCCCTTACTCTTGGAT+AGG + chr5_1:19991130-19991149 Msa0722630:intron 40.0%
TCTCATGGTGAAGGATTGAT+TGG + chr5_1:19991590-19991609 Msa0722630:five_prime_UTR 40.0%
GGAAGCAAAAGCTTAGACTT+TGG + chr5_1:19991661-19991680 Msa0722630:five_prime_UTR 40.0%
ATTAACCTTTCCAGGTGTAG+AGG - chr5_1:19991718-19991737 None:intergenic 40.0%
TACTCTGATGTGTTCTCGTT+AGG + chr5_1:19991825-19991844 Msa0722630:intron 40.0%
GCCTCACATTCAAAACTATG+TGG + chr5_1:19991941-19991960 Msa0722630:intron 40.0%
!! TAGGAAGTGTCACAACTAAG+AGG - chr5_1:19992017-19992036 None:intergenic 40.0%
! ACTGTCAGACAAGTCCTTTT+AGG - chr5_1:19992036-19992055 None:intergenic 40.0%
CGCATAAAGGCAGAATACAT+TGG - chr5_1:19992217-19992236 None:intergenic 40.0%
TAGGAGAACAGCTTCAAGAT+TGG - chr5_1:19992449-19992468 None:intergenic 40.0%
CATACTGGTGAGTTTGATGT+GGG - chr5_1:19992504-19992523 None:intergenic 40.0%
ACATACTGGTGAGTTTGATG+TGG - chr5_1:19992505-19992524 None:intergenic 40.0%
CATCAAACTCACCAGTATGT+AGG + chr5_1:19992505-19992524 Msa0722630:intron 40.0%
GATATGGAGATCCTACATAC+TGG - chr5_1:19992519-19992538 None:intergenic 40.0%
GATGCTTAAGGTTGCATTCA+AGG - chr5_1:19992583-19992602 None:intergenic 40.0%
TAACTGTGATGGTCTATGCA+TGG - chr5_1:19992631-19992650 None:intergenic 40.0%
GGATACCTCAATAACTGTGA+TGG - chr5_1:19992642-19992661 None:intergenic 40.0%
TCAGGGGTTGTTTGGTAAAT+GGG - chr5_1:19992696-19992715 None:intergenic 40.0%
TTCAGGGGTTGTTTGGTAAA+TGG - chr5_1:19992697-19992716 None:intergenic 40.0%
CAATAACTTCAGGGGTTGTT+TGG - chr5_1:19992704-19992723 None:intergenic 40.0%
CAAACAACCCCTGAAGTTAT+TGG + chr5_1:19992702-19992721 Msa0722630:intron 40.0%
TTGGTTGAAGCTATAGGAGA+TGG - chr5_1:19992853-19992872 None:intergenic 40.0%
CTTTAACTGTTTGTGCTCAG+AGG - chr5_1:19992920-19992939 None:intergenic 40.0%
ACAAACAGTTAAAGTTGGCC+AGG + chr5_1:19992926-19992945 Msa0722630:intron 40.0%
ACCAACTGGAATCAGAATTG+TGG - chr5_1:19993210-19993229 None:intergenic 40.0%
TAGGGGAAAAAGGTTTGTGT+CGG - chr5_1:19993597-19993616 None:intergenic 40.0%
TGTTGAATGGAGTGATGTAC+AGG + chr5_1:19993876-19993895 Msa0722630:CDS 40.0%
GGAAGCAATACTTCAGGATT+TGG - chr5_1:19993980-19993999 None:intergenic 40.0%
GATGTAGGAAGCAATACTTC+AGG - chr5_1:19993986-19994005 None:intergenic 40.0%
TCCTAGTGCATCATCTTAGT+CGG + chr5_1:19994088-19994107 Msa0722630:intron 40.0%
! TGAAGGATGTTGATAGGAAC+TGG - chr5_1:19994317-19994336 None:intergenic 40.0%
TCGTGATGAAGGATGTTGAT+AGG - chr5_1:19994323-19994342 None:intergenic 40.0%
!! AAGGTGTTGTTATTGGTAGG+CGG - chr5_1:19994472-19994491 None:intergenic 40.0%
GTCTAGTGGTAAAAGCTCTA+AGG - chr5_1:19994491-19994510 None:intergenic 40.0%
AACAAAACCCGTACATCGTA+CGG + chr5_1:19995008-19995027 Msa0722630:intron 40.0%
AACATCTCCTGTAGAACAGA+AGG - chr5_1:19995084-19995103 None:intergenic 40.0%
!! CATGAATTTAAGGCATTGCC+TGG + chr5_1:19995150-19995169 Msa0722630:intron 40.0%
!!! GCATTGCCTGGTATCTTTTT+TGG + chr5_1:19995162-19995181 Msa0722630:intron 40.0%
! GAAGTGAAAGTACATAAGCC+AGG - chr5_1:19995754-19995773 None:intergenic 40.0%
GTTCAATCACTAGAGATGTC+AGG + chr5_1:19995863-19995882 Msa0722630:CDS 40.0%
! AAGCTTAGACAGCTACTTTC+TGG + chr5_1:19995919-19995938 Msa0722630:CDS 40.0%
GACCAATACCTTGTCAAAGT+AGG - chr5_1:19995959-19995978 None:intergenic 40.0%
ATCTGTCTACATGTGTGTAG+TGG + chr5_1:19996364-19996383 Msa0722630:intron 40.0%
GTGTGTTTGTCAAAGCACAT+GGG - chr5_1:19996410-19996429 None:intergenic 40.0%
TGTGTGTTTGTCAAAGCACA+TGG - chr5_1:19996411-19996430 None:intergenic 40.0%
! CATACAAGGTTCTAGCAACT+GGG + chr5_1:19996585-19996604 Msa0722630:CDS 40.0%
ATTCATTCCATCCTGTTCGT+TGG + chr5_1:19996613-19996632 Msa0722630:CDS 40.0%
AAGGGAAGAAAAGAGAGATG+AGG - chr5_1:19997246-19997265 None:intergenic 40.0%
TCCAAAAGGTCCATGATCAT+CGG - chr5_1:19990654-19990673 None:intergenic 40.0%
CAGTTGGCTGTAATTCCAAA+AGG - chr5_1:19990668-19990687 None:intergenic 40.0%
CAGTTGCACCAATATCTGTT+GGG + chr5_1:19997617-19997636 Msa0722630:intron 40.0%
TTGCGCTATTGTGATTTACC+TGG + chr5_1:19997645-19997664 Msa0722630:CDS 40.0%
GAATGTAACTAGAGCTTACC+AGG - chr5_1:19997666-19997685 None:intergenic 40.0%
! ACCTCGTTTTCGAAAAGCAA+GGG - chr5_1:19997782-19997801 None:intergenic 40.0%
TTCGAAAACGAGGTCACTAT+CGG + chr5_1:19997788-19997807 Msa0722630:three_prime_UTR 40.0%
!!! CCGTTAGTTTTTCTCTAACC+TGG + chr5_1:19998078-19998097 Msa0722630:three_prime_UTR 40.0%
AACCTTAAACCCAACAGATC+TGG + chr5_1:19998328-19998347 Msa0722630:three_prime_UTR 40.0%
ACCTTAAACCCAACAGATCT+GGG + chr5_1:19998329-19998348 Msa0722630:three_prime_UTR 40.0%
ATGTTAAGGACTACGGCTTT+GGG - chr5_1:19998445-19998464 None:intergenic 40.0%
AATGTTAAGGACTACGGCTT+TGG - chr5_1:19998446-19998465 None:intergenic 40.0%
!! CATTGAAAAGTGCCTTTGCT+TGG + chr5_1:19998462-19998481 Msa0722630:three_prime_UTR 40.0%
AGAAAGAATGCCATCAGAAC+TGG + chr5_1:19998508-19998527 Msa0722630:three_prime_UTR 40.0%
! AGTAGCACTGTCACTACTTT+TGG - chr5_1:19998575-19998594 None:intergenic 40.0%
CAGTCACTAGTCCTTTCTTA+TGG + chr5_1:19998986-19999005 Msa0722630:three_prime_UTR 40.0%
GAACCTGTTAATCCATAAGC+CGG + chr5_1:19999018-19999037 Msa0722630:three_prime_UTR 40.0%
GCACCTGCAACAAAATTGAT+CGG + chr5_1:19999135-19999154 Msa0722630:three_prime_UTR 40.0%
CACCTGCAACAAAATTGATC+GGG + chr5_1:19999136-19999155 Msa0722630:three_prime_UTR 40.0%
! ATCCCGATCAATTTTGTTGC+AGG - chr5_1:19999141-19999160 None:intergenic 40.0%
GCAACAAAATTGATCGGGAT+CGG + chr5_1:19999141-19999160 Msa0722630:three_prime_UTR 40.0%
AGTTGAATGCGTATGGAAAG+GGG + chr5_1:19999193-19999212 Msa0722630:three_prime_UTR 40.0%
TTACATCATCCTGATCACCT+TGG + chr5_1:19999341-19999360 Msa0722630:three_prime_UTR 40.0%
TGTTCATATCCAAGGTGATC+AGG - chr5_1:19999353-19999372 None:intergenic 40.0%
CATACGTGAAGGTTAAACCA+GGG - chr5_1:19999581-19999600 None:intergenic 40.0%
TCATACGTGAAGGTTAAACC+AGG - chr5_1:19999582-19999601 None:intergenic 40.0%
TGGCATTATTGGCAGTGAAA+CGG + chr5_1:19999677-19999696 Msa0722630:intron 40.0%
CCAGTCAAAGTCCTAGTTGA+TGG - chr5_1:19987614-19987633 None:intergenic 45.0%
CCATCAACTAGGACTTTGAC+TGG + chr5_1:19987611-19987630 Msa0722630:five_prime_UTR 45.0%
GGACTTTGACTGGAGATGAT+AGG + chr5_1:19987621-19987640 Msa0722630:five_prime_UTR 45.0%
!! GTGGAAATTCCGCTTTTCTC+TGG + chr5_1:19987652-19987671 Msa0722630:five_prime_UTR 45.0%
TAGAGAGGAACCTCTAACCA+TGG + chr5_1:19987878-19987897 Msa0722630:intron 45.0%
TAAAAGGGCTATCCGCTGTA+TGG - chr5_1:19988156-19988175 None:intergenic 45.0%
AGGGGCTATCAACAAGTTGT+AGG - chr5_1:19988215-19988234 None:intergenic 45.0%
TCTTTCGAGGGGTAAACGTA+GGG - chr5_1:19988517-19988536 None:intergenic 45.0%
TTCTTTCGAGGGGTAAACGT+AGG - chr5_1:19988518-19988537 None:intergenic 45.0%
GACTTCAATGGTCTCTTAGG+AGG - chr5_1:19989000-19989019 None:intergenic 45.0%
TTGCAGAGCTTCATTGACAG+TGG - chr5_1:19989076-19989095 None:intergenic 45.0%
ACTGTCAATGAAGCTCTGCA+AGG + chr5_1:19989075-19989094 Msa0722630:five_prime_UTR 45.0%
! CTGAGTGTGCATTGGCAATT+TGG - chr5_1:19989245-19989264 None:intergenic 45.0%
CAAATTGCCAATGCACACTC+AGG + chr5_1:19989243-19989262 Msa0722630:five_prime_UTR 45.0%
TTCAGTTGGTCCAGACTCTT+CGG + chr5_1:19989399-19989418 Msa0722630:five_prime_UTR 45.0%
CAATGATGAACCGAAGAGTC+TGG - chr5_1:19989412-19989431 None:intergenic 45.0%
CAGACTCTTCGGTTCATCAT+TGG + chr5_1:19989410-19989429 Msa0722630:five_prime_UTR 45.0%
! GGTTTTGCAGGAATACCAAC+TGG - chr5_1:19989559-19989578 None:intergenic 45.0%
CTATCAACTGGGCAAGATGA+AGG + chr5_1:19989825-19989844 Msa0722630:five_prime_UTR 45.0%
CCTATTCATTGATGCAGGTC+GGG + chr5_1:19989868-19989887 Msa0722630:intron 45.0%
TATTCATGACATGCAGACCG+AGG - chr5_1:19990031-19990050 None:intergenic 45.0%
! CTCCCTTTTCCTCCCTTTAT+TGG + chr5_1:19990486-19990505 Msa0722630:intron 45.0%
CCAAAAGGTCCATGATCATC+GGG - chr5_1:19990653-19990672 None:intergenic 45.0%
! TACTTGGTATTGGAGACAGG+TGG + chr5_1:19990738-19990757 Msa0722630:intron 45.0%
! ACTTGGTATTGGAGACAGGT+GGG + chr5_1:19990739-19990758 Msa0722630:intron 45.0%
! CACCATTTTACAAGGTGTGG+GGG - chr5_1:19990891-19990910 None:intergenic 45.0%
! CCACCATTTTACAAGGTGTG+GGG - chr5_1:19990892-19990911 None:intergenic 45.0%
! CACCACCATTTTACAAGGTG+TGG - chr5_1:19990894-19990913 None:intergenic 45.0%
CACACCTTGTAAAATGGTGG+TGG + chr5_1:19990892-19990911 Msa0722630:intron 45.0%
TGATTGGGTAGATTTGGACC+AGG + chr5_1:19990927-19990946 Msa0722630:intron 45.0%
GATTGGGTAGATTTGGACCA+GGG + chr5_1:19990928-19990947 Msa0722630:intron 45.0%
! AACGGGGGAGTTTGTCTTTT+TGG + chr5_1:19990967-19990986 Msa0722630:intron 45.0%
ACAGCCCTATCCAAGAGTAA+GGG - chr5_1:19991138-19991157 None:intergenic 45.0%
!! GGGCTGTCTTCATTGCTTTT+TGG + chr5_1:19991151-19991170 Msa0722630:intron 45.0%
! CAGGTTTGGGATCTTTCTCA+TGG + chr5_1:19991575-19991594 Msa0722630:intron 45.0%
TGGGATCTTTCTCATGGTGA+AGG + chr5_1:19991581-19991600 Msa0722630:five_prime_UTR 45.0%
CATGGTGAAGGATTGATTGG+AGG + chr5_1:19991593-19991612 Msa0722630:five_prime_UTR 45.0%
! CAAAAGCTTAGACTTTGGGG+TGG + chr5_1:19991666-19991685 Msa0722630:five_prime_UTR 45.0%
GCCAAATTCAATGAGTGGAC+TGG + chr5_1:19991911-19991930 Msa0722630:intron 45.0%
GCCAGTCCACTCATTGAATT+TGG - chr5_1:19991915-19991934 None:intergenic 45.0%
!!! TGAGCATCGAGTTGTTTTCC+AGG + chr5_1:19991983-19992002 Msa0722630:intron 45.0%
CAGTAATGACCATGTTACCC+TGG + chr5_1:19992052-19992071 Msa0722630:intron 45.0%
AGTCTTTGACCAGGGTAACA+TGG - chr5_1:19992064-19992083 None:intergenic 45.0%
CAGGGGTTGTTTGGTAAATG+GGG - chr5_1:19992695-19992714 None:intergenic 45.0%
! TATTGTCTGGGACCCAGAAA+TGG + chr5_1:19992882-19992901 Msa0722630:intron 45.0%
! ATTGTCTGGGACCCAGAAAT+GGG + chr5_1:19992883-19992902 Msa0722630:intron 45.0%
AGATCTCTGTATGACACCAC+GGG - chr5_1:19992959-19992978 None:intergenic 45.0%
CAGATCTCTGTATGACACCA+CGG - chr5_1:19992960-19992979 None:intergenic 45.0%
AGGGAAACCATATATGGACG+TGG - chr5_1:19993020-19993039 None:intergenic 45.0%
GCCACAATTCTGATTCCAGT+TGG + chr5_1:19993206-19993225 Msa0722630:intron 45.0%
TCTCCACTCAAAGTCCTTGT+TGG - chr5_1:19993781-19993800 None:intergenic 45.0%
GGACTTTGAGTGGAGATGAT+AGG + chr5_1:19993785-19993804 Msa0722630:five_prime_UTR 45.0%
ACCGACTAAGATGATGCACT+AGG - chr5_1:19994092-19994111 None:intergenic 45.0%
TAGTGCATCATCTTAGTCGG+TGG + chr5_1:19994091-19994110 Msa0722630:intron 45.0%
AGTGCATCATCTTAGTCGGT+GGG + chr5_1:19994092-19994111 Msa0722630:intron 45.0%
TGTTGGGTTCTTTCGGCATT+AGG + chr5_1:19994211-19994230 Msa0722630:intron 45.0%
GTTGGGTTCTTTCGGCATTA+GGG + chr5_1:19994212-19994231 Msa0722630:intron 45.0%
TTGGGTTCTTTCGGCATTAG+GGG + chr5_1:19994213-19994232 Msa0722630:intron 45.0%
ACAAAACCCGTACATCGTAC+GGG + chr5_1:19995009-19995028 Msa0722630:intron 45.0%
ACTCTAACCCGTACGATGTA+CGG - chr5_1:19995019-19995038 None:intergenic 45.0%
TGTCTGACCTTCTGTTCTAC+AGG + chr5_1:19995074-19995093 Msa0722630:intron 45.0%
CTGTTCTACAGGAGATGTTG+TGG + chr5_1:19995085-19995104 Msa0722630:intron 45.0%
CACTAGAATTGACGGGAAGT+GGG + chr5_1:19995380-19995399 Msa0722630:CDS 45.0%
GATTGACGTTTGTGATGCAC+TGG + chr5_1:19995407-19995426 Msa0722630:CDS 45.0%
TTTGGGAAACTGTACCAGTG+TGG + chr5_1:19995483-19995502 Msa0722630:intron 45.0%
TTGGGAAACTGTACCAGTGT+GGG + chr5_1:19995484-19995503 Msa0722630:intron 45.0%
TAAAAGACCTACACCCACAC+TGG - chr5_1:19995500-19995519 None:intergenic 45.0%
CAGCAGACATATAGAGAAGC+AGG + chr5_1:19995645-19995664 Msa0722630:intron 45.0%
!! ATGAGCACATTTGGTGTCAG+AGG - chr5_1:19996155-19996174 None:intergenic 45.0%
ACACCAAATGTGCTCATCAC+TGG + chr5_1:19996158-19996177 Msa0722630:CDS 45.0%
CACCAAATGTGCTCATCACT+GGG + chr5_1:19996159-19996178 Msa0722630:CDS 45.0%
ATCCCAGTGATGAGCACATT+TGG - chr5_1:19996164-19996183 None:intergenic 45.0%
! GGTTTTGCAGGAATACCAAC+TGG - chr5_1:19989559-19989578 None:intergenic 45.0%
! ACATGGGCAGGTATGTGTTT+TGG - chr5_1:19996394-19996413 None:intergenic 45.0%
CCTTGTATGGCGTTAAATGC+AGG - chr5_1:19996574-19996593 None:intergenic 45.0%
CCTGCATTTAACGCCATACA+AGG + chr5_1:19989800-19989819 Msa0722630:five_prime_UTR 45.0%
CCAGTTGCTAGAACCTTGTA+TGG - chr5_1:19996587-19996606 None:intergenic 45.0%
! CCATACAAGGTTCTAGCAAC+TGG + chr5_1:19996584-19996603 Msa0722630:CDS 45.0%
GCGATCAACGTGATCATGTA+TGG - chr5_1:19997292-19997311 None:intergenic 45.0%
CCAAAAGGTCCATGATCATC+GGG - chr5_1:19990653-19990672 None:intergenic 45.0%
! ACTTGGTATTGGAAGCAGGT+AGG + chr5_1:19997502-19997521 Msa0722630:intron 45.0%
GCAGTTGCACCAATATCTGT+TGG + chr5_1:19997616-19997635 Msa0722630:intron 45.0%
! GACCTCGTTTTCGAAAAGCA+AGG - chr5_1:19997783-19997802 None:intergenic 45.0%
TCCCAGATCTGTTGGGTTTA+AGG - chr5_1:19998333-19998352 None:intergenic 45.0%
! TCTGAGATCCCAGATCTGTT+GGG - chr5_1:19998340-19998359 None:intergenic 45.0%
!! TTCTGAGATCCCAGATCTGT+TGG - chr5_1:19998341-19998360 None:intergenic 45.0%
!! TACGGCTTTGGGTTTAAGGT+GGG - chr5_1:19998434-19998453 None:intergenic 45.0%
TTTCTGCTACCATTGCAACC+AGG - chr5_1:19998493-19998512 None:intergenic 45.0%
! TCTCTCTGGGAAATTCATGC+AGG - chr5_1:19998638-19998657 None:intergenic 45.0%
CATACGGTTCAACTTATGGG+AGG - chr5_1:19999096-19999115 None:intergenic 45.0%
GCGAGTTCAATTCCATACTG+AGG + chr5_1:19999403-19999422 Msa0722630:three_prime_UTR 45.0%
!!! TTTACTTTTTTTATTTTATT+TGG + chr5_1:19990303-19990322 Msa0722630:intron 5.0%
!!! AATAATTTTTTTGAAAAAAA+AGG + chr5_1:19994430-19994449 Msa0722630:intron 5.0%
GAGATGATAGGCAGCTCTTG+TGG + chr5_1:19987633-19987652 Msa0722630:five_prime_UTR 50.0%
! TGCTGACTGGAGTGAAGTAC+AGG + chr5_1:19987713-19987732 Msa0722630:five_prime_UTR 50.0%
CATGGCATAGGATTGAGTGG+AGG + chr5_1:19988291-19988310 Msa0722630:intron 50.0%
GACCATTCTGTACGCTGATG+TGG + chr5_1:19988577-19988596 Msa0722630:intron 50.0%
GGTGTACAAATTTCCCCGTG+TGG - chr5_1:19989312-19989331 None:intergenic 50.0%
GTGTGTCAAAGCACATAGGC+AGG - chr5_1:19989652-19989671 None:intergenic 50.0%
! TGGGCAAGATGAAGGCATAC+TGG + chr5_1:19989833-19989852 Msa0722630:five_prime_UTR 50.0%
CCCGACCTGCATCAATGAAT+AGG - chr5_1:19989871-19989890 None:intergenic 50.0%
AAGGGAGGAAAAGGGAGTTG+AGG - chr5_1:19990483-19990502 None:intergenic 50.0%
! CCCGATGATCATGGACCTTT+TGG + chr5_1:19990650-19990669 Msa0722630:five_prime_UTR 50.0%
CCCCACACCTTGTAAAATGG+TGG + chr5_1:19990889-19990908 Msa0722630:intron 50.0%
! AGACAAACTCCCCCGTTTTC+TGG - chr5_1:19990964-19990983 None:intergenic 50.0%
GACAGCCCTATCCAAGAGTA+AGG - chr5_1:19991139-19991158 None:intergenic 50.0%
TGGGGTGGAAAAGAAGCAGA+TGG + chr5_1:19991681-19991700 Msa0722630:five_prime_UTR 50.0%
GCATTCTCTACCTCTACACC+TGG + chr5_1:19991705-19991724 Msa0722630:five_prime_UTR 50.0%
CTCTACCTCTACACCTGGAA+AGG + chr5_1:19991710-19991729 Msa0722630:five_prime_UTR 50.0%
TGTGTTCTCGTTAGGTCCCT+AGG + chr5_1:19991833-19991852 Msa0722630:intron 50.0%
TAGGTCCCTAGGCATGAACA+TGG + chr5_1:19991844-19991863 Msa0722630:intron 50.0%
AGGTCCCTAGGCATGAACAT+GGG + chr5_1:19991845-19991864 Msa0722630:intron 50.0%
ACTCCCCATGTTCATGCCTA+GGG - chr5_1:19991852-19991871 None:intergenic 50.0%
AACTCCCCATGTTCATGCCT+AGG - chr5_1:19991853-19991872 None:intergenic 50.0%
TAGGCATGAACATGGGGAGT+TGG + chr5_1:19991852-19991871 Msa0722630:five_prime_UTR 50.0%
GCGAGGCCAAATTCAATGAG+TGG + chr5_1:19991906-19991925 Msa0722630:intron 50.0%
GTTTGTGTCGGAAAGAGAGC+GGG - chr5_1:19993585-19993604 None:intergenic 50.0%
GGTTTGTGTCGGAAAGAGAG+CGG - chr5_1:19993586-19993605 None:intergenic 50.0%
CCACTCAAAGTCCTTGTTGG+AGG - chr5_1:19993778-19993797 None:intergenic 50.0%
CCTCCAACAAGGACTTTGAG+TGG + chr5_1:19993775-19993794 Msa0722630:five_prime_UTR 50.0%
!! AGTCGGTGGGTGGATTAATC+AGG + chr5_1:19994105-19994124 Msa0722630:intron 50.0%
!! GTCGGTGGGTGGATTAATCA+GGG + chr5_1:19994106-19994125 Msa0722630:intron 50.0%
! AACCCTAATCCCGCCCTTTT+TGG + chr5_1:19994399-19994418 Msa0722630:intron 50.0%
TTTAGACCCGCCAAAAAGGG+CGG - chr5_1:19994412-19994431 None:intergenic 50.0%
CTCTAACCCGTACGATGTAC+GGG - chr5_1:19995018-19995037 None:intergenic 50.0%
GCACTAGAATTGACGGGAAG+TGG + chr5_1:19995379-19995398 Msa0722630:CDS 50.0%
AACTGTACCAGTGTGGGTGT+AGG + chr5_1:19995490-19995509 Msa0722630:intron 50.0%
TTCACTTCTCAGATGGGAGC+TGG + chr5_1:19995766-19995785 Msa0722630:intron 50.0%
AGAGATGTCAGGAATGTCCG+AGG + chr5_1:19995874-19995893 Msa0722630:CDS 50.0%
GGTGTCAGAGGTGATCGTAT+TGG - chr5_1:19996143-19996162 None:intergenic 50.0%
GTTTGTCAAAGCACATGGGC+AGG - chr5_1:19996406-19996425 None:intergenic 50.0%
! CCCGATGATCATGGACCTTT+TGG + chr5_1:19990650-19990669 Msa0722630:five_prime_UTR 50.0%
!! GCCCTTGCTTTTCGAAAACG+AGG + chr5_1:19997778-19997797 Msa0722630:three_prime_UTR 50.0%
! TTTGGGTTTAAGGTGGGGCT+TGG - chr5_1:19998428-19998447 None:intergenic 50.0%
!! ACGGCTTTGGGTTTAAGGTG+GGG - chr5_1:19998433-19998452 None:intergenic 50.0%
!! CTACGGCTTTGGGTTTAAGG+TGG - chr5_1:19998435-19998454 None:intergenic 50.0%
!! GGACTACGGCTTTGGGTTTA+AGG - chr5_1:19998438-19998457 None:intergenic 50.0%
AACCAGGACAGTCCAAGCAA+AGG - chr5_1:19998477-19998496 None:intergenic 50.0%
TTGGACTGTCCTGGTTGCAA+TGG + chr5_1:19998481-19998500 Msa0722630:three_prime_UTR 50.0%
!! ACGCCGGCTTATGGATTAAC+AGG - chr5_1:19999024-19999043 None:intergenic 50.0%
TGGTTTATGCTTCGGTACGC+CGG - chr5_1:19999040-19999059 None:intergenic 50.0%
GCGTACCGAAGCATAAACCA+AGG + chr5_1:19999040-19999059 Msa0722630:three_prime_UTR 50.0%
! GGTGGATTTGCACCTCAGTA+TGG - chr5_1:19999418-19999437 None:intergenic 50.0%
CTGAGGTGCAAATCCACCAT+AGG + chr5_1:19999420-19999439 Msa0722630:three_prime_UTR 50.0%
GGCCTTTCACTTAGCCGTAG+CGG + chr5_1:19988125-19988144 Msa0722630:intron 55.0%
AGCCGCTACGGCTAAGTGAA+AGG - chr5_1:19988130-19988149 None:intergenic 55.0%
AAGGGCTATCCGCTGTATGG+AGG - chr5_1:19988153-19988172 None:intergenic 55.0%
GGCCACATCAGCGTACAGAA+TGG - chr5_1:19988582-19988601 None:intergenic 55.0%
TGATCTTCGCCAGGACCAGT+TGG + chr5_1:19989541-19989560 Msa0722630:five_prime_UTR 55.0%
GCAGGAATACCAACTGGTCC+TGG - chr5_1:19989553-19989572 None:intergenic 55.0%
GTGGGGGCCTTGGAAGATAT+TGG - chr5_1:19990875-19990894 None:intergenic 55.0%
TTTACAAGGTGTGGGGGCCT+TGG - chr5_1:19990885-19990904 None:intergenic 55.0%
GGCCCCCACACCTTGTAAAA+TGG + chr5_1:19990886-19990905 Msa0722630:intron 55.0%
GGTCCCTAGGCATGAACATG+GGG + chr5_1:19991846-19991865 Msa0722630:intron 55.0%
! ACATGGGGAGTTGGAGCGTT+TGG + chr5_1:19991861-19991880 Msa0722630:five_prime_UTR 55.0%
TTGGCCAGGAGTTTAACCCG+TGG + chr5_1:19992940-19992959 Msa0722630:intron 55.0%
! GACACCACGGGTTAAACTCC+TGG - chr5_1:19992947-19992966 None:intergenic 55.0%
GAGATGATAGGCAGCGCTTG+TGG + chr5_1:19993797-19993816 Msa0722630:five_prime_UTR 55.0%
GCATCATCTTAGTCGGTGGG+TGG + chr5_1:19994095-19994114 Msa0722630:intron 55.0%
GGGCGGGATTAGGGTTAAAC+AGG - chr5_1:19994395-19994414 None:intergenic 55.0%
CGCCAAAAAGGGCGGGATTA+GGG - chr5_1:19994404-19994423 None:intergenic 55.0%
! CCTAATCCCGCCCTTTTTGG+CGG + chr5_1:19994402-19994421 Msa0722630:intron 55.0%
!! CTAATCCCGCCCTTTTTGGC+GGG + chr5_1:19994403-19994422 Msa0722630:intron 55.0%
TTAGACCCGCCAAAAAGGGC+GGG - chr5_1:19994411-19994430 None:intergenic 55.0%
TGATCTTCGCCAGGACCAGT+TGG + chr5_1:19989541-19989560 Msa0722630:five_prime_UTR 55.0%
GCAGGAATACCAACTGGTCC+TGG - chr5_1:19989553-19989572 None:intergenic 55.0%
TCCATCCTGTTCGTTGGCAC+AGG + chr5_1:19996619-19996638 Msa0722630:CDS 55.0%
ACCTGTGCCAACGAACAGGA+TGG - chr5_1:19996623-19996642 None:intergenic 55.0%
CTCTACCTGTGCCAACGAAC+AGG - chr5_1:19996627-19996646 None:intergenic 55.0%
TGCCTTTGCTTGGACTGTCC+TGG + chr5_1:19998472-19998491 Msa0722630:three_prime_UTR 55.0%
GCTGTATGGAGGAGCCGCTA+CGG - chr5_1:19988142-19988161 None:intergenic 60.0%
GTAGCGGCTCCTCCATACAG+CGG + chr5_1:19988141-19988160 Msa0722630:intron 60.0%
GCTGCGACCTGAGTGTGCAT+TGG - chr5_1:19989253-19989272 None:intergenic 60.0%
CAGGTCGCAGCCTTTGCAGT+TGG + chr5_1:19989262-19989281 Msa0722630:five_prime_UTR 60.0%
GAAGGGGGATGATCTTCGCC+AGG + chr5_1:19989532-19989551 Msa0722630:five_prime_UTR 60.0%
CCGCCAAAAAGGGCGGGATT+AGG - chr5_1:19994405-19994424 None:intergenic 60.0%
CAGATGGGAGCTGGTGCGAA+CGG + chr5_1:19995775-19995794 Msa0722630:intron 60.0%
GGTGCGAACGGAGAGGAAGA+TGG + chr5_1:19995787-19995806 Msa0722630:CDS 60.0%
GAAGGGGGATGATCTTCGCC+AGG + chr5_1:19989532-19989551 Msa0722630:five_prime_UTR 60.0%
!! TGCTTCGGTACGCCGGCTTA+TGG - chr5_1:19999033-19999052 None:intergenic 60.0%
GGGAGCTGGTGCGAACGGAG+AGG + chr5_1:19995780-19995799 Msa0722630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 19986972 19999788 19986972 ID=Msa0722630;Name=Msa0722630
chr5_1 mRNA 19986972 19999788 19986972 ID=Msa0722630-mRNA-1;Parent=Msa0722630;Name=Msa0722630-mRNA-1;_AED=0.11;_eAED=0.11;_QI=1805|0.73|0.81|0.93|0.6|0.5|16|1870|329
chr5_1 exon 19986972 19987121 19986972 ID=Msa0722630-mRNA-1:exon:7573;Parent=Msa0722630-mRNA-1
chr5_1 exon 19987251 19987424 19987251 ID=Msa0722630-mRNA-1:exon:7574;Parent=Msa0722630-mRNA-1
chr5_1 exon 19987608 19987734 19987608 ID=Msa0722630-mRNA-1:exon:7575;Parent=Msa0722630-mRNA-1
chr5_1 exon 19988981 19989884 19988981 ID=Msa0722630-mRNA-1:exon:7576;Parent=Msa0722630-mRNA-1
chr5_1 exon 19990602 19990756 19990602 ID=Msa0722630-mRNA-1:exon:7577;Parent=Msa0722630-mRNA-1
chr5_1 exon 19991578 19991731 19991578 ID=Msa0722630-mRNA-1:exon:7578;Parent=Msa0722630-mRNA-1
chr5_1 exon 19991847 19991899 19991847 ID=Msa0722630-mRNA-1:exon:7579;Parent=Msa0722630-mRNA-1
chr5_1 exon 19993750 19993897 19993750 ID=Msa0722630-mRNA-1:exon:7580;Parent=Msa0722630-mRNA-1
chr5_1 exon 19995315 19995461 19995315 ID=Msa0722630-mRNA-1:exon:7581;Parent=Msa0722630-mRNA-1
chr5_1 exon 19995778 19995969 19995778 ID=Msa0722630-mRNA-1:exon:7582;Parent=Msa0722630-mRNA-1
chr5_1 exon 19996140 19996310 19996140 ID=Msa0722630-mRNA-1:exon:7583;Parent=Msa0722630-mRNA-1
chr5_1 exon 19996518 19996640 19996518 ID=Msa0722630-mRNA-1:exon:7584;Parent=Msa0722630-mRNA-1
chr5_1 exon 19997113 19997206 19997113 ID=Msa0722630-mRNA-1:exon:7585;Parent=Msa0722630-mRNA-1
chr5_1 exon 19997375 19997519 19997375 ID=Msa0722630-mRNA-1:exon:7586;Parent=Msa0722630-mRNA-1
chr5_1 exon 19997620 19999461 19997620 ID=Msa0722630-mRNA-1:exon:7587;Parent=Msa0722630-mRNA-1
chr5_1 exon 19999703 19999788 19999703 ID=Msa0722630-mRNA-1:exon:7588;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19986972 19987121 19986972 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19987251 19987424 19987251 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19987608 19987734 19987608 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19988981 19989884 19988981 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19990602 19990756 19990602 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19991578 19991731 19991578 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19991847 19991899 19991847 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 five_prime_UTR 19993750 19993837 19993750 ID=Msa0722630-mRNA-1:five_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19993838 19993897 19993838 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19995315 19995461 19995315 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19995778 19995969 19995778 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19996140 19996310 19996140 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19996518 19996640 19996518 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19997113 19997206 19997113 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19997375 19997519 19997375 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 CDS 19997620 19997677 19997620 ID=Msa0722630-mRNA-1:cds;Parent=Msa0722630-mRNA-1
chr5_1 three_prime_UTR 19997678 19999461 19997678 ID=Msa0722630-mRNA-1:three_prime_utr;Parent=Msa0722630-mRNA-1
chr5_1 three_prime_UTR 19999703 19999788 19999703 ID=Msa0722630-mRNA-1:three_prime_utr;Parent=Msa0722630-mRNA-1
Gene Sequence

>Msa0722630

ATGTCTGAGAAGAGGGCTCTAACAAAATTTCTTCGTTGTGTTGAATGGAGTGATGTACAGTTCTTATTACTCAATAACAGCTGTAGAAATTTCAATACTGGTTTCATAACAGGAAGCAAAACAAGCACTAGAATTGACGGGAAGTGGGAAATGATTGACGTTTGTGATGCACTGGAACTTTTGTCTCCAGTTTTTGAAAGTGAAGAGATGGGAGCTGGTGCGAACGGAGAGGAAGATGGATTTAAACGTTGGAAGAGTTTAGTACGGCAGACAGAATTAACTGCTCAGTTGTGTTCAATCACTAGAGATGTCAGGAATGTCCGAGGTAATACACAGAAGAAGATTGAAAAGCTTAGACAGCTACTTTCTGGTCTTAGTGAACTTACCTACTTTGACAAGCCAATACGATCACCTCTGACACCAAATGTGCTCATCACTGGGATTGTGCCCTCAGAGTCATCAATAATTAAAAGTGCACTGCATCCTTTGCGCCTTACTTTTAAAACAGCAAATGGCGGAACCTGTAAAATCATATTTAAGAAGGGGGATGATCTTCGCCAGGACCAGTTGGTTACTCAAATGGTATCGTTAATGGATCGATTGCTAAAGTTAGAAAATCTTGACCTGCATTTAACGCCATACAAGGTTCTAGCAACTGGGCAAGAATTCATTCCATCCTGTTCGTTGGCACAGAGGGTGTTTACAAAATGTTTCCCATTTCTTTTTCAAGAAAAGATAAAGAGCCTCATTGAATACAAATGCATGTCAGTTGCTTTGTTAATATTGGAGGATCGCAGCATCATAAGCTATTTGCAGAATTTTCATCCCGATGATCATGGACCTTTTGGAATTACAGCCAACTGTCTTGAAATGTTTATACTAAGCTGTGCTGGCTACTCCATTATCACTTATATACTTGGTATTGGAAGCAGTTGCACCAATATCTGTTGGGTTTCATTGCGCTATTGTGATTTACCTGGTAAGCTCTAG
Protein sequence

>Msa0722630

MSEKRALTKFLRCVEWSDVQFLLLNNSCRNFNTGFITGSKTSTRIDGKWEMIDVCDALELLSPVFESEEMGAGANGEEDGFKRWKSLVRQTELTAQLCSITRDVRNVRGNTQKKIEKLRQLLSGLSELTYFDKPIRSPLTPNVLITGIVPSESSIIKSALHPLRLTFKTANGGTCKIIFKKGDDLRQDQLVTQMVSLMDRLLKLENLDLHLTPYKVLATGQEFIPSCSLAQRVFTKCFPFLFQEKIKSLIEYKCMSVALLILEDRSIISYLQNFHPDDHGPFGITANCLEMFILSCAGYSIITYILGIGSSCTNICWVSLRYCDLPGKL*