Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090850 | sp|F4JCU3|MVD2_ARATH | 80.668 | 419 | 80 | 1 | 1 | 418 | 1 | 419 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090850 | A0A072W240 | 98.325 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0090850 | 0.802370 | 5.793545e-49 | -8.615850e-47 |
| Msa0044170 | Msa0090850 | 0.984392 | 1.998620e-160 | -8.615850e-47 |
| Msa0046200 | Msa0090850 | 0.814050 | 1.876932e-51 | -8.615850e-47 |
| Msa0090850 | Msa0183700 | 0.801845 | 7.430763e-49 | -8.615850e-47 |
| Msa0090850 | Msa0189720 | 0.846198 | 2.525758e-59 | -8.615850e-47 |
| Msa0090850 | Msa0199720 | 0.833783 | 4.373000e-56 | -8.615850e-47 |
| Msa0090850 | Msa0232100 | 0.839557 | 1.475403e-57 | -8.615850e-47 |
| Msa0090850 | Msa0280470 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
| Msa0090850 | Msa0310130 | 0.806069 | 9.840290e-50 | -8.615850e-47 |
| Msa0090850 | Msa0319690 | 0.825874 | 3.695022e-54 | -8.615850e-47 |
| Msa0090850 | Msa0371510 | 0.813704 | 2.237325e-51 | -8.615850e-47 |
| Msa0090850 | Msa0419730 | 0.805102 | 1.570034e-49 | -8.615850e-47 |
| Msa0090850 | Msa0437540 | 0.946253 | 6.568339e-105 | -8.615850e-47 |
| Msa0090850 | Msa0450030 | 0.805348 | 1.393862e-49 | -8.615850e-47 |
| Msa0090850 | Msa0484200 | 0.812344 | 4.443870e-51 | -8.615850e-47 |
| Msa0090850 | Msa0753920 | 0.822755 | 1.998602e-53 | -8.615850e-47 |
| Msa0090850 | Msa0807010 | 0.848801 | 4.862265e-60 | -8.615850e-47 |
| Msa0090850 | Msa0832940 | 0.844628 | 6.718877e-59 | -8.615850e-47 |
| Msa0090850 | Msa0881310 | 0.818374 | 2.027029e-52 | -8.615850e-47 |
| Msa0090850 | Msa1200500 | 0.885682 | 6.589353e-72 | -8.615850e-47 |
| Msa0090850 | Msa1206920 | 0.809736 | 1.632666e-50 | -8.615850e-47 |
| Msa0090850 | Msa1253520 | 0.848609 | 5.494312e-60 | -8.615850e-47 |
| Msa0090850 | Msa1255710 | 0.825687 | 4.091942e-54 | -8.615850e-47 |
| Msa0090850 | Msa1257200 | 0.817840 | 2.675979e-52 | -8.615850e-47 |
| Msa0090850 | Msa1293840 | 0.904043 | 1.852124e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090850 | MtrunA17_Chr1g0210791 | 98.325 | 418 | 7 | 0 | 1 | 418 | 1 | 418 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090850 | AT3G54250.1 | 80.668 | 419 | 80 | 1 | 1 | 418 | 1 | 419 | 0.0 | 697 |
| Msa0090850 | AT2G38700.1 | 76.372 | 419 | 91 | 2 | 1 | 418 | 1 | 412 | 0.0 | 654 |
| Msa0090850 | AT3G54250.2 | 84.039 | 307 | 49 | 0 | 1 | 307 | 1 | 307 | 0.0 | 530 |
Find 152 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCCCATGTACCTTATT+TGG | 0.031696 | 1_2:+72941173 | None:intergenic |
| TTCCTCTTTGATTGATTTAT+TGG | 0.066713 | 1_2:-72947295 | Msa0090850:five_prime_UTR |
| GCTCTTCTCAACAGTGAAAA+TGG | 0.180412 | 1_2:-72941201 | Msa0090850:CDS |
| CTTCCCTCCAGTTACATTAT+TGG | 0.191653 | 1_2:-72941399 | Msa0090850:intron |
| GGAATATTGTCTTTAATTTC+TGG | 0.195761 | 1_2:+72941309 | None:intergenic |
| GAAGATTCCAGAGCTGTTTA+AGG | 0.204279 | 1_2:-72946392 | Msa0090850:CDS |
| AGTGCTTGTCGTAGCTTATT+TGG | 0.220437 | 1_2:-72943869 | Msa0090850:CDS |
| GTGTAGGAAATTTCTCTTTC+CGG | 0.230107 | 1_2:-72946417 | Msa0090850:intron |
| GGGATTTGTGAAGTGGAAAA+TGG | 0.242630 | 1_2:-72943846 | Msa0090850:CDS |
| TGATGTTGAGGATAATAAAA+AGG | 0.260260 | 1_2:-72946349 | Msa0090850:CDS |
| GTGCTTGTCGTAGCTTATTT+GGG | 0.264802 | 1_2:-72943868 | Msa0090850:CDS |
| ATCATTAACAGGTAAGATTA+GGG | 0.303873 | 1_2:+72947182 | None:intergenic |
| TATCATTCATGTAAAATATA+GGG | 0.309352 | 1_2:+72942423 | None:intergenic |
| GCATGGTGATTTGATTTAAT+AGG | 0.311492 | 1_2:-72947539 | Msa0090850:five_prime_UTR |
| CGGTTCTAATTGCACGTAAT+AGG | 0.313651 | 1_2:-72941578 | Msa0090850:CDS |
| GCCAAAGAGGATACTGAAAA+TGG | 0.316786 | 1_2:-72942540 | Msa0090850:CDS |
| TGGTTGATCTATTCTTCATT+AGG | 0.316789 | 1_2:-72941144 | Msa0090850:three_prime_UTR |
| CTGTTGAGGTCATCTGAATT+TGG | 0.317231 | 1_2:+72941510 | None:intergenic |
| TATCATTAACAGGTAAGATT+AGG | 0.322166 | 1_2:+72947181 | None:intergenic |
| GTATCATTCATGTAAAATAT+AGG | 0.322715 | 1_2:+72942422 | None:intergenic |
| CATTGCTGTGATCAAGTATT+GGG | 0.327233 | 1_2:-72947220 | Msa0090850:CDS |
| AACAGGTCCCCTTCCTGGTC+TGG | 0.327487 | 1_2:+72941245 | None:intergenic |
| TATATATATTAGTTAGTAAT+GGG | 0.329149 | 1_2:+72947379 | None:intergenic |
| AACAAAACAAGGAAAGAGTT+AGG | 0.335219 | 1_2:-72947506 | Msa0090850:five_prime_UTR |
| TTATTTATTCATTTCCCATT+TGG | 0.336742 | 1_2:+72947459 | None:intergenic |
| TGTAGGAAATTTCTCTTTCC+GGG | 0.344687 | 1_2:-72946416 | Msa0090850:intron |
| CCAGTTTCATGCAGTTTGTC+TGG | 0.349580 | 1_2:-72942456 | Msa0090850:CDS |
| GAAAATGGGCTTCCCAAATA+AGG | 0.349886 | 1_2:-72941186 | Msa0090850:exon |
| TTTGATTGATTTATTGGAAA+TGG | 0.357406 | 1_2:-72947289 | Msa0090850:exon |
| ATTTCCCATGTACCTTATTT+GGG | 0.363262 | 1_2:+72941174 | None:intergenic |
| CTTCATTAGGCTTATCTGTC+CGG | 0.383929 | 1_2:-72941131 | Msa0090850:three_prime_UTR |
| CTTCCCCACTGCAGCTGGAT+TGG | 0.391119 | 1_2:-72946265 | Msa0090850:CDS |
| GAGATTAAATTGAATTCGTT+CGG | 0.405752 | 1_2:+72947407 | None:intergenic |
| CAATTTGCTCCAATCCTCCT+TGG | 0.409304 | 1_2:+72946314 | None:intergenic |
| CCAGACAAACTGCATGAAAC+TGG | 0.411135 | 1_2:+72942456 | None:intergenic |
| AACAACTTCCCCACTGCAGC+TGG | 0.415060 | 1_2:-72946270 | Msa0090850:CDS |
| CGTGCAATTAGAACCGCGTT+TGG | 0.416780 | 1_2:+72941585 | None:intergenic |
| TGGAAATGGCGGGTGATAGT+TGG | 0.416905 | 1_2:-72947275 | Msa0090850:exon |
| AAAGCAACTTCTGAATCAAA+AGG | 0.417167 | 1_2:+72941544 | None:intergenic |
| AATCATGTCATGGGTACAAC+AGG | 0.421940 | 1_2:+72941062 | None:intergenic |
| GAGAAGAGAATCCATCCAAA+TGG | 0.429630 | 1_2:-72947474 | Msa0090850:five_prime_UTR |
| CTTTCATCAGTAAGCACAAC+AGG | 0.429825 | 1_2:+72941228 | None:intergenic |
| TTTCTTAGATGACCCTTTCA+AGG | 0.430043 | 1_2:-72941088 | Msa0090850:three_prime_UTR |
| AGCACAACAGGTCCCCTTCC+TGG | 0.433113 | 1_2:+72941240 | None:intergenic |
| CTAGGTTAGCTCTCGGCAAA+AGG | 0.434194 | 1_2:-72943025 | Msa0090850:intron |
| CAAATTCAGATGACCTCAAC+AGG | 0.435218 | 1_2:-72941509 | Msa0090850:intron |
| GCAAAAGATGCTGGGATCAA+TGG | 0.438234 | 1_2:-72941363 | Msa0090850:CDS |
| ACACTGATACTATCATTAAC+AGG | 0.448731 | 1_2:+72947171 | None:intergenic |
| AAGTCAATTGCAAAAGATGC+TGG | 0.449709 | 1_2:-72941372 | Msa0090850:CDS |
| CTCTTCTCAACAGTGAAAAT+GGG | 0.455253 | 1_2:-72941200 | Msa0090850:CDS |
| AAGATTCCAGAGCTGTTTAA+GGG | 0.458336 | 1_2:-72946391 | Msa0090850:CDS |
| GCTGCGGGTTTCGCTTGTCT+TGG | 0.462943 | 1_2:-72946234 | Msa0090850:intron |
| GGATTTGTGAAGTGGAAAAT+GGG | 0.468572 | 1_2:-72943845 | Msa0090850:CDS |
| TTATATATATTAGTTAGTAA+TGG | 0.470292 | 1_2:+72947378 | None:intergenic |
| TGACATTCATTAGCTTCCCC+AGG | 0.470709 | 1_2:+72944048 | None:intergenic |
| GGAAATGGCGGGTGATAGTT+GGG | 0.471328 | 1_2:-72947274 | Msa0090850:exon |
| CAAGATCGTATGTGGCTCAA+TGG | 0.475195 | 1_2:-72947087 | Msa0090850:CDS |
| GGATCTCCCTTAAACAGCTC+TGG | 0.477766 | 1_2:+72946385 | None:intergenic |
| ACATTGCTGTGATCAAGTAT+TGG | 0.482733 | 1_2:-72947221 | Msa0090850:CDS |
| GTAGCTTATACGTTTGATGC+AGG | 0.483477 | 1_2:-72941609 | Msa0090850:CDS |
| AAGGAAACTAGCAGCACCTC+AGG | 0.484840 | 1_2:-72943006 | Msa0090850:CDS |
| ACCTTGCAATAGCAGACAGC+TGG | 0.485298 | 1_2:+72944012 | None:intergenic |
| CCTTTCAACAAGATCGTATG+TGG | 0.485330 | 1_2:-72947095 | Msa0090850:CDS |
| TTGTCTTTAATTTCTGGAGG+TGG | 0.485942 | 1_2:+72941315 | None:intergenic |
| TTATTCATTTCCCATTTGGA+TGG | 0.486621 | 1_2:+72947463 | None:intergenic |
| TGATATTTATAGGAGGAGAA+TGG | 0.489664 | 1_2:-72943750 | Msa0090850:intron |
| TTAAGATCACCAAGGAGGAT+TGG | 0.489853 | 1_2:-72946323 | Msa0090850:CDS |
| GGCTTCCCAAATAAGGTACA+TGG | 0.490515 | 1_2:-72941179 | Msa0090850:exon |
| AACTTGCTGATGAAAAGCAT+TGG | 0.492166 | 1_2:-72943707 | Msa0090850:CDS |
| AAACTGGTTGCTATCGGTAC+AGG | 0.492574 | 1_2:+72942472 | None:intergenic |
| TCTTTAATTTCTGGAGGTGG+TGG | 0.493387 | 1_2:+72941318 | None:intergenic |
| ACTATATACAGGCAAGGATC+AGG | 0.494638 | 1_2:-72943893 | Msa0090850:intron |
| TGCAAAATCACGGTTTCGAA+TGG | 0.495401 | 1_2:+72942511 | None:intergenic |
| AGAAGAGAATCCATCCAAAT+GGG | 0.499644 | 1_2:-72947473 | Msa0090850:five_prime_UTR |
| GTACAACAGGCTTCCTTGAA+AGG | 0.505102 | 1_2:+72941075 | None:intergenic |
| AAGCAGCAGTAGAACGAAGA+AGG | 0.506291 | 1_2:-72947433 | Msa0090850:five_prime_UTR |
| TGCTGGGATCAATGGAATAG+AGG | 0.509843 | 1_2:-72941355 | Msa0090850:CDS |
| TGGATTGGCTTCATCAGCTG+CGG | 0.515526 | 1_2:-72946250 | Msa0090850:CDS |
| CCGTTCAGAAGAAGCTCCAC+AGG | 0.520575 | 1_2:-72942252 | Msa0090850:intron |
| TACTTTATATGCACCAGACC+AGG | 0.522597 | 1_2:-72941258 | Msa0090850:CDS |
| TGGTGATTTGATTTAATAGG+AGG | 0.523567 | 1_2:-72947536 | Msa0090850:five_prime_UTR |
| GAACACAAATAATCATGTCA+TGG | 0.523799 | 1_2:+72941052 | None:intergenic |
| ACTTGCTGATGAAAAGCATT+GGG | 0.525139 | 1_2:-72943706 | Msa0090850:CDS |
| TACAACAGGCTTCCTTGAAA+GGG | 0.527193 | 1_2:+72941076 | None:intergenic |
| TTGAGGTCATCTGAATTTGG+AGG | 0.527987 | 1_2:+72941513 | None:intergenic |
| AGCAGCAGTAGAACGAAGAA+GGG | 0.529653 | 1_2:-72947432 | Msa0090850:five_prime_UTR |
| TGCTTGTCGTAGCTTATTTG+GGG | 0.531557 | 1_2:-72943867 | Msa0090850:CDS |
| TGCAGTGGGGAAGTTGTTGT+AGG | 0.531785 | 1_2:+72946275 | None:intergenic |
| ACAAAACAAGGAAAGAGTTA+GGG | 0.535738 | 1_2:-72947505 | Msa0090850:five_prime_UTR |
| ACAGCTCTGGAATCTTCCCC+CGG | 0.536812 | 1_2:+72946398 | None:intergenic |
| GGATTGGCTTCATCAGCTGC+GGG | 0.537741 | 1_2:-72946249 | Msa0090850:CDS |
| ACTAACAGAAACGGTGGTAG+TGG | 0.541116 | 1_2:+72947122 | None:intergenic |
| TATTCCATCACAAAAGTACA+AGG | 0.548644 | 1_2:-72941292 | Msa0090850:CDS |
| AAGCAACTTCTGAATCAAAA+GGG | 0.555123 | 1_2:+72941545 | None:intergenic |
| TTTATTTCTAGGTTAGCTCT+CGG | 0.556502 | 1_2:-72943032 | Msa0090850:intron |
| AACACAAATAATCATGTCAT+GGG | 0.557351 | 1_2:+72941053 | None:intergenic |
| ATCATTCATGTAAAATATAG+GGG | 0.557388 | 1_2:+72942424 | None:intergenic |
| TGCATGAAACTGGTTGCTAT+CGG | 0.559504 | 1_2:+72942466 | None:intergenic |
| TAGCTTATACGTTTGATGCA+GGG | 0.567321 | 1_2:-72941608 | Msa0090850:CDS |
| TGAAGCCAATCCAGCTGCAG+TGG | 0.570482 | 1_2:+72946260 | None:intergenic |
| AATGAAGAATAGATCAACCA+TGG | 0.572623 | 1_2:+72941147 | None:intergenic |
| TATATGCACCAGACCAGGAA+GGG | 0.575319 | 1_2:-72941253 | Msa0090850:CDS |
| GACATTCATTAGCTTCCCCA+GGG | 0.579343 | 1_2:+72944049 | None:intergenic |
| AATAGGAAATAGTGCCAAAG+AGG | 0.581666 | 1_2:-72942553 | Msa0090850:intron |
| ATATTGTCTTTAATTTCTGG+AGG | 0.581787 | 1_2:+72941312 | None:intergenic |
| TTCCAATAAATCAATCAAAG+AGG | 0.583411 | 1_2:+72947293 | None:intergenic |
| GAAGCCAATCCAGCTGCAGT+GGG | 0.584983 | 1_2:+72946261 | None:intergenic |
| TTCCATCACAAAAGTACAAG+GGG | 0.586717 | 1_2:-72941290 | Msa0090850:CDS |
| TAATCAGCATTGTTGACAAG+TGG | 0.588743 | 1_2:-72942277 | Msa0090850:CDS |
| AGTCAATTGCAAAAGATGCT+GGG | 0.589588 | 1_2:-72941371 | Msa0090850:CDS |
| CAACATCACACGCGCGAGCA+CGG | 0.590089 | 1_2:+72946364 | None:intergenic |
| TGCTCGCGCGTGTGATGTTG+AGG | 0.590241 | 1_2:-72946361 | Msa0090850:CDS |
| CCTGTGGAGCTTCTTCTGAA+CGG | 0.591583 | 1_2:+72942252 | None:intergenic |
| ATACTTGATCACAGCAATGT+TGG | 0.591879 | 1_2:+72947224 | None:intergenic |
| ATTGATTTATTGGAAATGGC+GGG | 0.593123 | 1_2:-72947285 | Msa0090850:exon |
| ATACGATCTTGTTGAAAGGA+AGG | 0.593700 | 1_2:+72947099 | None:intergenic |
| ACTTGTTATTGTTATTGCTG+TGG | 0.594012 | 1_2:-72943679 | Msa0090850:intron |
| GGGTGATAGTTGGGTACTGA+TGG | 0.595158 | 1_2:-72947265 | Msa0090850:CDS |
| GTAGTGGTGCAAAGATGAGC+GGG | 0.598911 | 1_2:+72947138 | None:intergenic |
| TATGTTTATTGAATATTGCA+TGG | 0.600725 | 1_2:-72947556 | Msa0090850:five_prime_UTR |
| CCACATACGATCTTGTTGAA+AGG | 0.601733 | 1_2:+72947095 | None:intergenic |
| AACAGTATCACGCATTCCTG+AGG | 0.602816 | 1_2:+72942990 | None:intergenic |
| TCGTATGTGGCTCAATGGCA+AGG | 0.603313 | 1_2:-72947082 | Msa0090850:intron |
| TGAGGTCATCTGAATTTGGA+GGG | 0.603420 | 1_2:+72941514 | None:intergenic |
| GCCAGCTGTCTGCTATTGCA+AGG | 0.603691 | 1_2:-72944013 | Msa0090850:intron |
| GCTTGTCGTAGCTTATTTGG+GGG | 0.616141 | 1_2:-72943866 | Msa0090850:CDS |
| GTAGGAAATTTCTCTTTCCG+GGG | 0.619131 | 1_2:-72946415 | Msa0090850:intron |
| GATTGATTTATTGGAAATGG+CGG | 0.620199 | 1_2:-72947286 | Msa0090850:exon |
| AAAGGAAGGACTAACAGAAA+CGG | 0.623699 | 1_2:+72947113 | None:intergenic |
| ATATGCACCAGACCAGGAAG+GGG | 0.629282 | 1_2:-72941252 | Msa0090850:CDS |
| ATGAAGAATAGATCAACCAT+GGG | 0.632388 | 1_2:+72941148 | None:intergenic |
| GAGGTCCCGTAAACAAAACA+AGG | 0.633143 | 1_2:-72947517 | Msa0090850:five_prime_UTR |
| TTGATCACAGCAATGTTGGT+TGG | 0.639254 | 1_2:+72947228 | None:intergenic |
| ACATGAATGATACATCCCAT+AGG | 0.641400 | 1_2:-72942412 | Msa0090850:intron |
| ATTCCATCACAAAAGTACAA+GGG | 0.644199 | 1_2:-72941291 | Msa0090850:CDS |
| GCAGCAGTAGAACGAAGAAG+GGG | 0.655083 | 1_2:-72947431 | Msa0090850:five_prime_UTR |
| CTGAGTAACAGATCTAAGTG+AGG | 0.656597 | 1_2:+72947326 | None:intergenic |
| TCATTCATGTAAAATATAGG+GGG | 0.658384 | 1_2:+72942425 | None:intergenic |
| GGTAGTGGTGCAAAGATGAG+CGG | 0.659191 | 1_2:+72947137 | None:intergenic |
| GCTTCCCAAATAAGGTACAT+GGG | 0.661948 | 1_2:-72941178 | Msa0090850:exon |
| GAATGGAAGTGATAGTCTTG+CGG | 0.663425 | 1_2:-72943733 | Msa0090850:CDS |
| ATTGCTGTGATCAAGTATTG+GGG | 0.675109 | 1_2:-72947219 | Msa0090850:CDS |
| GTACATGGGAAATATTCCCA+TGG | 0.678115 | 1_2:-72941164 | Msa0090850:three_prime_UTR |
| GTTTGATGCAGGGCCAAACG+CGG | 0.678166 | 1_2:-72941598 | Msa0090850:CDS |
| TTATATGCACCAGACCAGGA+AGG | 0.679375 | 1_2:-72941254 | Msa0090850:CDS |
| TAGGAAATTTCTCTTTCCGG+GGG | 0.687639 | 1_2:-72946414 | Msa0090850:CDS |
| AACAAGGAAAGAGTTAGGGT+AGG | 0.690689 | 1_2:-72947501 | Msa0090850:five_prime_UTR |
| GGGTATTAAGATCACCAAGG+AGG | 0.716838 | 1_2:-72946328 | Msa0090850:CDS |
| GGAAGGACTAACAGAAACGG+TGG | 0.719571 | 1_2:+72947116 | None:intergenic |
| AAAGGGTATTAAGATCACCA+AGG | 0.729322 | 1_2:-72946331 | Msa0090850:CDS |
| TCCATCACAAAAGTACAAGG+GGG | 0.737564 | 1_2:-72941289 | Msa0090850:CDS |
| AAGCCAATCCAGCTGCAGTG+GGG | 0.738884 | 1_2:+72946262 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATTAGTTAGTAAT+GGG | + | chr1_2:72941248-72941267 | None:intergenic | 10.0% |
| !! | TTATATATATTAGTTAGTAA+TGG | + | chr1_2:72941249-72941268 | None:intergenic | 10.0% |
| !!! | TTTAAATTTTCAATTCTTAA+TGG | - | chr1_2:72941611-72941630 | Msa0090850:CDS | 10.0% |
| !!! | TTAAATTTTCAATTCTTAAT+GGG | - | chr1_2:72941612-72941631 | Msa0090850:CDS | 10.0% |
| !!! | TTTTACTTTCAATTTTTAAT+TGG | - | chr1_2:72942162-72942181 | Msa0090850:intron | 10.0% |
| !! | ATAATTATCTAATAAAATTG+TGG | + | chr1_2:72943763-72943782 | None:intergenic | 10.0% |
| !! | CAAATAAATAAAAAATTATG+TGG | + | chr1_2:72945457-72945476 | None:intergenic | 10.0% |
| !! | CATATATAGTATATATTATA+CGG | - | chr1_2:72946917-72946936 | Msa0090850:intron | 10.0% |
| !!! | CATTTTTTATATGTATTTGA+TGG | - | chr1_2:72941954-72941973 | Msa0090850:intron | 15.0% |
| !! | ATAACTATAATAGATTGAAT+CGG | - | chr1_2:72943813-72943832 | Msa0090850:intron | 15.0% |
| !!! | CTCAGATTTTTATTAATTAA+TGG | + | chr1_2:72943942-72943961 | None:intergenic | 15.0% |
| !! | CATTAATTAATAAAAATCTG+AGG | - | chr1_2:72943940-72943959 | Msa0090850:intron | 15.0% |
| !! | AGATTATTGAATAAAGAATA+AGG | + | chr1_2:72944339-72944358 | None:intergenic | 15.0% |
| !! | TTCTTTATTCAATAATCTTT+AGG | - | chr1_2:72944341-72944360 | Msa0090850:intron | 15.0% |
| !!! | TTACTATTACTTTTATATGA+GGG | - | chr1_2:72944492-72944511 | Msa0090850:intron | 15.0% |
| !!! | TATTTTATTTAAATCTCTGT+GGG | - | chr1_2:72944811-72944830 | Msa0090850:intron | 15.0% |
| !!! | TGTATTCTTTTGATATTTAT+AGG | - | chr1_2:72944864-72944883 | Msa0090850:intron | 15.0% |
| !!! | TTTCTTTAGAAATATACATT+GGG | + | chr1_2:72945773-72945792 | None:intergenic | 15.0% |
| !!! | ATTTCTTTAGAAATATACAT+TGG | + | chr1_2:72945774-72945793 | None:intergenic | 15.0% |
| !! | TTATATAAATAATTATGCCA+TGG | - | chr1_2:72945997-72946016 | Msa0090850:intron | 15.0% |
| !! | TATCATTCATGTAAAATATA+GGG | + | chr1_2:72946204-72946223 | None:intergenic | 15.0% |
| !! | TAATTCATTAGTTACTTATT+TGG | - | chr1_2:72946592-72946611 | Msa0090850:intron | 15.0% |
| !! | TTATTTGGAAAACAAATTAA+AGG | - | chr1_2:72946607-72946626 | Msa0090850:intron | 15.0% |
| !! | TATGTTTATTGAATATTGCA+TGG | - | chr1_2:72941068-72941087 | Msa0090850:three_prime_UTR | 20.0% |
| !! | TTATTTATTCATTTCCCATT+TGG | + | chr1_2:72941168-72941187 | None:intergenic | 20.0% |
| !!! | TTTGATTGATTTATTGGAAA+TGG | - | chr1_2:72941335-72941354 | Msa0090850:CDS | 20.0% |
| !! | AAGTTTAAAGAGAAAAAAGA+AGG | + | chr1_2:72941576-72941595 | None:intergenic | 20.0% |
| !! | GATAATAAACAATCAAGTAT+TGG | + | chr1_2:72941933-72941952 | None:intergenic | 20.0% |
| !!! | TACTTTCAATTTTTAATTGG+TGG | - | chr1_2:72942165-72942184 | Msa0090850:intron | 20.0% |
| !! | AATGATAAGAAGAAAATTAG+AGG | - | chr1_2:72942847-72942866 | Msa0090850:intron | 20.0% |
| !! | ATGATAAGAAGAAAATTAGA+GGG | - | chr1_2:72942848-72942867 | Msa0090850:intron | 20.0% |
| !! | AGAATAACCAAAATATTCAT+GGG | + | chr1_2:72942945-72942964 | None:intergenic | 20.0% |
| !! | TAGAATAACCAAAATATTCA+TGG | + | chr1_2:72942946-72942965 | None:intergenic | 20.0% |
| !! | GTTGAACTAATAAATGTTAT+TGG | - | chr1_2:72943437-72943456 | Msa0090850:intron | 20.0% |
| !! | CTTATTAATAACTCAATACT+TGG | + | chr1_2:72944181-72944200 | None:intergenic | 20.0% |
| !!! | ATGTTTATTGTCTTATGTTT+TGG | - | chr1_2:72944301-72944320 | Msa0090850:intron | 20.0% |
| !! | TTCAAACTTTATGTTCTTTA+AGG | - | chr1_2:72944372-72944391 | Msa0090850:intron | 20.0% |
| !!! | GTTACTATTACTTTTATATG+AGG | - | chr1_2:72944491-72944510 | Msa0090850:intron | 20.0% |
| !! | CTGTATATAGTAACAATATT+CGG | + | chr1_2:72944722-72944741 | None:intergenic | 20.0% |
| !!! | GTATTTTATTTAAATCTCTG+TGG | - | chr1_2:72944810-72944829 | Msa0090850:intron | 20.0% |
| !! | CAAAAGAATACAAATTACAA+TGG | + | chr1_2:72944856-72944875 | None:intergenic | 20.0% |
| !!! | ATTCTTTTGATATTTATAGG+AGG | - | chr1_2:72944867-72944886 | Msa0090850:intron | 20.0% |
| !! | TTTGTCTCTATTTAATTGAA+TGG | - | chr1_2:72944981-72945000 | Msa0090850:intron | 20.0% |
| !! | ATCATACCATAATACTAATT+TGG | - | chr1_2:72945359-72945378 | Msa0090850:intron | 20.0% |
| !! | ATATTGCCAAATTAGTATTA+TGG | + | chr1_2:72945368-72945387 | None:intergenic | 20.0% |
| !! | CTAGAAATAAATAATGAGAT+GGG | + | chr1_2:72945583-72945602 | None:intergenic | 20.0% |
| !! | AAAGTAATATTCATCTAACA+TGG | + | chr1_2:72945731-72945750 | None:intergenic | 20.0% |
| !!! | TAAAAGAATGAAAAGGTTTT+AGG | + | chr1_2:72945830-72945849 | None:intergenic | 20.0% |
| !! | TTGGTATTAAAAGAATGAAA+AGG | + | chr1_2:72945837-72945856 | None:intergenic | 20.0% |
| !! | TAATCAAACTTAAATTACCA+TGG | + | chr1_2:72946017-72946036 | None:intergenic | 20.0% |
| !! | ATCATTCATGTAAAATATAG+GGG | + | chr1_2:72946203-72946222 | None:intergenic | 20.0% |
| !! | GTATCATTCATGTAAAATAT+AGG | + | chr1_2:72946205-72946224 | None:intergenic | 20.0% |
| !! | AAACTAAAAGAAACTTCTTA+TGG | - | chr1_2:72946495-72946514 | Msa0090850:intron | 20.0% |
| !! | AGATTTAGGAAAAAAACAAT+CGG | + | chr1_2:72946534-72946553 | None:intergenic | 20.0% |
| !!! | ATACTTGATAATAATATGAG+AGG | + | chr1_2:72946788-72946807 | None:intergenic | 20.0% |
| !! | TATATAAACATCATTCATGT+GGG | + | chr1_2:72946878-72946897 | None:intergenic | 20.0% |
| ! | GAGATTAAATTGAATTCGTT+CGG | + | chr1_2:72941220-72941239 | None:intergenic | 25.0% |
| !! | TTCCTCTTTGATTGATTTAT+TGG | - | chr1_2:72941329-72941348 | Msa0090850:CDS | 25.0% |
| ! | TTCCAATAAATCAATCAAAG+AGG | + | chr1_2:72941334-72941353 | None:intergenic | 25.0% |
| ! | ATCATTAACAGGTAAGATTA+GGG | + | chr1_2:72941445-72941464 | None:intergenic | 25.0% |
| ! | TATCATTAACAGGTAAGATT+AGG | + | chr1_2:72941446-72941465 | None:intergenic | 25.0% |
| !!! | CACTTTTTATGTGTATTTGT+TGG | - | chr1_2:72941653-72941672 | Msa0090850:intron | 25.0% |
| ! | ATGTAGTAATTTGAGAAAAC+TGG | + | chr1_2:72941847-72941866 | None:intergenic | 25.0% |
| ! | TGATGTTGAGGATAATAAAA+AGG | - | chr1_2:72942275-72942294 | Msa0090850:CDS | 25.0% |
| ! | GATGTTGAGGATAATAAAAA+GGG | - | chr1_2:72942276-72942295 | Msa0090850:CDS | 25.0% |
| ! | ATACTCATAACAATTACATG+TGG | + | chr1_2:72942494-72942513 | None:intergenic | 25.0% |
| ! | CAATAACCATTACAATTACA+TGG | + | chr1_2:72942533-72942552 | None:intergenic | 25.0% |
| ! | CATGTAATTGTAATGGTTAT+TGG | - | chr1_2:72942531-72942550 | Msa0090850:CDS | 25.0% |
| ! | TAATCAATGACAATCAGATT+TGG | + | chr1_2:72942683-72942702 | None:intergenic | 25.0% |
| !! | GTTTAAGATCTAAATCAAAC+AGG | - | chr1_2:72942716-72942735 | Msa0090850:intron | 25.0% |
| !! | AATTTTCCCCATGAATATTT+TGG | - | chr1_2:72942935-72942954 | Msa0090850:intron | 25.0% |
| ! | GAATAACCAAAATATTCATG+GGG | + | chr1_2:72942944-72942963 | None:intergenic | 25.0% |
| !!! | ATTCTAGAGCAAATATTGAA+AGG | - | chr1_2:72942960-72942979 | Msa0090850:CDS | 25.0% |
| ! | TTATTAGTTCAACTATGTTG+TGG | + | chr1_2:72943430-72943449 | None:intergenic | 25.0% |
| ! | ATAGAAAGAAAGAATATCGA+CGG | + | chr1_2:72943539-72943558 | None:intergenic | 25.0% |
| !! | AAACTTTATGTTCTTTAAGG+CGG | - | chr1_2:72944375-72944394 | Msa0090850:intron | 25.0% |
| ! | ACTAAAACAACATGGAAATT+AGG | + | chr1_2:72944452-72944471 | None:intergenic | 25.0% |
| ! | TTTATATGAGGGTTTATACT+AGG | - | chr1_2:72944503-72944522 | Msa0090850:intron | 25.0% |
| ! | TTTATGACTTTAAACTTGCA+AGG | - | chr1_2:72944645-72944664 | Msa0090850:intron | 25.0% |
| ! | CGAATATTGTTACTATATAC+AGG | - | chr1_2:72944720-72944739 | Msa0090850:intron | 25.0% |
| ! | AAGTATTAAATGGTATGTTG+TGG | - | chr1_2:72945049-72945068 | Msa0090850:intron | 25.0% |
| ! | ATACTAATTTGGCAATATTG+TGG | - | chr1_2:72945370-72945389 | Msa0090850:intron | 25.0% |
| ! | CAAGATAAAAAATACTGCTT+GGG | + | chr1_2:72945480-72945499 | None:intergenic | 25.0% |
| ! | ACAAGATAAAAAATACTGCT+TGG | + | chr1_2:72945481-72945500 | None:intergenic | 25.0% |
| ! | CCTAGAAATAAATAATGAGA+TGG | + | chr1_2:72945584-72945603 | None:intergenic | 25.0% |
| !! | CCATCTCATTATTTATTTCT+AGG | - | chr1_2:72945581-72945600 | Msa0090850:intron | 25.0% |
| ! | CATCTTACTATTGTTAACAT+TGG | - | chr1_2:72945875-72945894 | Msa0090850:intron | 25.0% |
| ! | TACTATTTGAGAGAGAAAAA+TGG | + | chr1_2:72945911-72945930 | None:intergenic | 25.0% |
| ! | AGTAAGCATGAATTTAAACA+CGG | - | chr1_2:72945927-72945946 | Msa0090850:intron | 25.0% |
| ! | TCATTCATGTAAAATATAGG+GGG | + | chr1_2:72946202-72946221 | None:intergenic | 25.0% |
| !! | GTTAAATTTTGTCAATTGTC+TGG | - | chr1_2:72946450-72946469 | Msa0090850:intron | 25.0% |
| !!! | GTTTTAGAATATTGAGTGAT+TGG | + | chr1_2:72946479-72946498 | None:intergenic | 25.0% |
| ! | GAACTTAGTATGAAAGATTT+AGG | + | chr1_2:72946548-72946567 | None:intergenic | 25.0% |
| ! | TGAATTACTTCTGATGTAAA+AGG | + | chr1_2:72946579-72946598 | None:intergenic | 25.0% |
| ! | TTTGGAAAACAAATTAAAGG+AGG | - | chr1_2:72946610-72946629 | Msa0090850:intron | 25.0% |
| ! | GTATATAAACATCATTCATG+TGG | + | chr1_2:72946879-72946898 | None:intergenic | 25.0% |
| ! | ATAGAAACCTATGAATTTGT+AGG | + | chr1_2:72946964-72946983 | None:intergenic | 25.0% |
| !! | ATATTGTCTTTAATTTCTGG+AGG | + | chr1_2:72947315-72947334 | None:intergenic | 25.0% |
| !! | GGAATATTGTCTTTAATTTC+TGG | + | chr1_2:72947318-72947337 | None:intergenic | 25.0% |
| !!! | ATATTTTGAGCTAATATAGC+CGG | + | chr1_2:72947515-72947534 | None:intergenic | 25.0% |
| ! | AACACAAATAATCATGTCAT+GGG | + | chr1_2:72947574-72947593 | None:intergenic | 25.0% |
| ! | GCATGGTGATTTGATTTAAT+AGG | - | chr1_2:72941085-72941104 | Msa0090850:three_prime_UTR | 30.0% |
| ! | TGGTGATTTGATTTAATAGG+AGG | - | chr1_2:72941088-72941107 | Msa0090850:three_prime_UTR | 30.0% |
| !!! | TCTTTCCTTGTTTTGTTTAC+GGG | + | chr1_2:72941115-72941134 | None:intergenic | 30.0% |
| !!! | CTCTTTCCTTGTTTTGTTTA+CGG | + | chr1_2:72941116-72941135 | None:intergenic | 30.0% |
| AACAAAACAAGGAAAGAGTT+AGG | - | chr1_2:72941118-72941137 | Msa0090850:three_prime_UTR | 30.0% | |
| ACAAAACAAGGAAAGAGTTA+GGG | - | chr1_2:72941119-72941138 | Msa0090850:three_prime_UTR | 30.0% | |
| TTATTCATTTCCCATTTGGA+TGG | + | chr1_2:72941164-72941183 | None:intergenic | 30.0% | |
| ! | GATTGATTTATTGGAAATGG+CGG | - | chr1_2:72941338-72941357 | Msa0090850:CDS | 30.0% |
| ! | ATTGATTTATTGGAAATGGC+GGG | - | chr1_2:72941339-72941358 | Msa0090850:CDS | 30.0% |
| ACACTGATACTATCATTAAC+AGG | + | chr1_2:72941456-72941475 | None:intergenic | 30.0% | |
| ! | TGTGTATTTGTTGGATTCAT+TGG | - | chr1_2:72941662-72941681 | Msa0090850:intron | 30.0% |
| ! | TGAGTTTTTCTCGAATTCAT+TGG | - | chr1_2:72941766-72941785 | Msa0090850:intron | 30.0% |
| TTATGAGTATGCCAACAAAT+TGG | - | chr1_2:72942504-72942523 | Msa0090850:CDS | 30.0% | |
| TTACATGGAATCCAATTTGT+TGG | + | chr1_2:72942518-72942537 | None:intergenic | 30.0% | |
| TGGATTCCATGTAATTGTAA+TGG | - | chr1_2:72942524-72942543 | Msa0090850:CDS | 30.0% | |
| TAATTGTAATGGTTATTGGC+CGG | - | chr1_2:72942535-72942554 | Msa0090850:CDS | 30.0% | |
| CATAAGTTTGAGCATAATGT+GGG | - | chr1_2:72942635-72942654 | Msa0090850:intron | 30.0% | |
| AGTTGCATGTTACAAGAAAT+AGG | - | chr1_2:72942756-72942775 | Msa0090850:intron | 30.0% | |
| TGTTACAAGAAATAGGTTTG+AGG | - | chr1_2:72942763-72942782 | Msa0090850:intron | 30.0% | |
| TAAGAAGAAAATTAGAGGGA+AGG | - | chr1_2:72942852-72942871 | Msa0090850:intron | 30.0% | |
| AAGAAGAAAATTAGAGGGAA+GGG | - | chr1_2:72942853-72942872 | Msa0090850:intron | 30.0% | |
| TTATCTCATTATCCAAACTC+AGG | - | chr1_2:72942898-72942917 | Msa0090850:intron | 30.0% | |
| TTCATGAATAAACTTTGACC+AGG | - | chr1_2:72942986-72943005 | Msa0090850:CDS | 30.0% | |
| !! | ATATTGGCCTTGGATAATAA+AGG | - | chr1_2:72943057-72943076 | Msa0090850:intron | 30.0% |
| !! | TATTGGCCTTGGATAATAAA+GGG | - | chr1_2:72943058-72943077 | Msa0090850:intron | 30.0% |
| CTTGTGTAAAAAACATGGTA+AGG | - | chr1_2:72943154-72943173 | Msa0090850:intron | 30.0% | |
| ! | ACTTGTCTTTTTATGAGTGT+TGG | + | chr1_2:72943386-72943405 | None:intergenic | 30.0% |
| ATTCAACACATCAGATTCTA+AGG | + | chr1_2:72943733-72943752 | None:intergenic | 30.0% | |
| ACTATAATAGATTGAATCGG+TGG | - | chr1_2:72943816-72943835 | Msa0090850:intron | 30.0% | |
| ! | ATTTGTTTCGGGTACATAAT+CGG | - | chr1_2:72943841-72943860 | Msa0090850:CDS | 30.0% |
| !!! | TTCTTGTGGTTTTGTCTTTA+TGG | - | chr1_2:72944024-72944043 | Msa0090850:CDS | 30.0% |
| ATCTAAACCGTGTATTAGAT+TGG | - | chr1_2:72944069-72944088 | Msa0090850:intron | 30.0% | |
| CTCAATTATGGCTACAAATA+CGG | + | chr1_2:72944155-72944174 | None:intergenic | 30.0% | |
| GTATTTGTAGCCATAATTGA+GGG | - | chr1_2:72944154-72944173 | Msa0090850:intron | 30.0% | |
| !! | CTTATGTTTTGGATTCATAG+AGG | - | chr1_2:72944312-72944331 | Msa0090850:intron | 30.0% |
| CTACTGTAACTAAAACAACA+TGG | + | chr1_2:72944460-72944479 | None:intergenic | 30.0% | |
| !!! | TTGTTTTAGTTACAGTAGCA+TGG | - | chr1_2:72944462-72944481 | Msa0090850:intron | 30.0% |
| ATTGTTACTATATACAGGCA+AGG | - | chr1_2:72944725-72944744 | Msa0090850:intron | 30.0% | |
| TGATATTTATAGGAGGAGAA+TGG | - | chr1_2:72944874-72944893 | Msa0090850:intron | 30.0% | |
| !! | ACTTGTTATTGTTATTGCTG+TGG | - | chr1_2:72944945-72944964 | Msa0090850:intron | 30.0% |
| TATGTGAAGCTCATATATTC+TGG | - | chr1_2:72945079-72945098 | Msa0090850:intron | 30.0% | |
| !! | TTGCCTTGTTATTCTCTAAT+AGG | - | chr1_2:72945152-72945171 | Msa0090850:intron | 30.0% |
| TTTGCTTCCTAATGTGTTAA+TGG | - | chr1_2:72945407-72945426 | Msa0090850:intron | 30.0% | |
| !! | TTTATTTCTAGGTTAGCTCT+CGG | - | chr1_2:72945592-72945611 | Msa0090850:intron | 30.0% |
| !!! | GAAAAGGTTTTAGGAAAAGA+GGG | + | chr1_2:72945821-72945840 | None:intergenic | 30.0% |
| !!! | TGAAAAGGTTTTAGGAAAAG+AGG | + | chr1_2:72945822-72945841 | None:intergenic | 30.0% |
| TAGTAAGATGCTTGAAAGTA+GGG | + | chr1_2:72945865-72945884 | None:intergenic | 30.0% | |
| ATAGTAAGATGCTTGAAAGT+AGG | + | chr1_2:72945866-72945885 | None:intergenic | 30.0% | |
| TTTCTCATTTGAACCACAAT+AGG | - | chr1_2:72946054-72946073 | Msa0090850:intron | 30.0% | |
| GTGAAAAAGATGCAAAATCA+CGG | + | chr1_2:72946126-72946145 | None:intergenic | 30.0% | |
| CAACTATTCTATTTCACTTC+AGG | - | chr1_2:72946323-72946342 | Msa0090850:CDS | 30.0% | |
| AAGAAAGTAATTCAAACCTG+TGG | + | chr1_2:72946391-72946410 | None:intergenic | 30.0% | |
| ACAGGTTTGAATTACTTTCT+TGG | - | chr1_2:72946390-72946409 | Msa0090850:CDS | 30.0% | |
| AATTGACAAAATTTAACCCC+AGG | + | chr1_2:72946447-72946466 | None:intergenic | 30.0% | |
| TTAAACCTTTACTCCATAAC+TGG | - | chr1_2:72946820-72946839 | Msa0090850:intron | 30.0% | |
| ! | GGGTATTATATGCATTTTCA+GGG | + | chr1_2:72946858-72946877 | None:intergenic | 30.0% |
| ! | TGGGTATTATATGCATTTTC+AGG | + | chr1_2:72946859-72946878 | None:intergenic | 30.0% |
| ! | GTTTATATACACAGCTTGTT+TGG | - | chr1_2:72946889-72946908 | Msa0090850:intron | 30.0% |
| ACTAACACCTACAAATTCAT+AGG | - | chr1_2:72946954-72946973 | Msa0090850:intron | 30.0% | |
| AAGCAACTTCTGAATCAAAA+GGG | + | chr1_2:72947082-72947101 | None:intergenic | 30.0% | |
| AAAGCAACTTCTGAATCAAA+AGG | + | chr1_2:72947083-72947102 | None:intergenic | 30.0% | |
| !!! | AACAGGTGCTTTTTAAGTTT+TGG | - | chr1_2:72947132-72947151 | Msa0090850:CDS | 30.0% |
| ! | TATTCCATCACAAAAGTACA+AGG | - | chr1_2:72947332-72947351 | Msa0090850:five_prime_UTR | 30.0% |
| ! | ATTCCATCACAAAAGTACAA+GGG | - | chr1_2:72947333-72947352 | Msa0090850:five_prime_UTR | 30.0% |
| ! | ATTTCCCATGTACCTTATTT+GGG | + | chr1_2:72947453-72947472 | None:intergenic | 30.0% |
| TATTTCCCATGTACCTTATT+TGG | + | chr1_2:72947454-72947473 | None:intergenic | 30.0% | |
| ATGAAGAATAGATCAACCAT+GGG | + | chr1_2:72947479-72947498 | None:intergenic | 30.0% | |
| AATGAAGAATAGATCAACCA+TGG | + | chr1_2:72947480-72947499 | None:intergenic | 30.0% | |
| TGGTTGATCTATTCTTCATT+AGG | - | chr1_2:72947480-72947499 | Msa0090850:five_prime_UTR | 30.0% | |
| GAACACAAATAATCATGTCA+TGG | + | chr1_2:72947575-72947594 | None:intergenic | 30.0% | |
| AGAAGAGAATCCATCCAAAT+GGG | - | chr1_2:72941151-72941170 | Msa0090850:three_prime_UTR | 35.0% | |
| ATACTTGATCACAGCAATGT+TGG | + | chr1_2:72941403-72941422 | None:intergenic | 35.0% | |
| ACATTGCTGTGATCAAGTAT+TGG | - | chr1_2:72941403-72941422 | Msa0090850:intron | 35.0% | |
| CATTGCTGTGATCAAGTATT+GGG | - | chr1_2:72941404-72941423 | Msa0090850:intron | 35.0% | |
| ! | ATTGCTGTGATCAAGTATTG+GGG | - | chr1_2:72941405-72941424 | Msa0090850:intron | 35.0% |
| AAAGGAAGGACTAACAGAAA+CGG | + | chr1_2:72941514-72941533 | None:intergenic | 35.0% | |
| ATACGATCTTGTTGAAAGGA+AGG | + | chr1_2:72941528-72941547 | None:intergenic | 35.0% | |
| !! | AACAAGCACTGACAAATACA+CGG | + | chr1_2:72941744-72941763 | None:intergenic | 35.0% |
| !! | ATGAAGCACTGAAACATACA+TGG | + | chr1_2:72942033-72942052 | None:intergenic | 35.0% |
| GTCTACTACTTGCTTGTTTA+TGG | - | chr1_2:72942062-72942081 | Msa0090850:intron | 35.0% | |
| ! | TTGGTGGAATTTCGTTTTGT+CGG | - | chr1_2:72942181-72942200 | Msa0090850:intron | 35.0% |
| GTGTAGGAAATTTCTCTTTC+CGG | - | chr1_2:72942207-72942226 | Msa0090850:intron | 35.0% | |
| TGTAGGAAATTTCTCTTTCC+GGG | - | chr1_2:72942208-72942227 | Msa0090850:intron | 35.0% | |
| AAGATTCCAGAGCTGTTTAA+GGG | - | chr1_2:72942233-72942252 | Msa0090850:intron | 35.0% | |
| !! | AAAGGGTATTAAGATCACCA+AGG | - | chr1_2:72942293-72942312 | Msa0090850:intron | 35.0% |
| GTGAAAGACTACACAAATAC+CGG | + | chr1_2:72942557-72942576 | None:intergenic | 35.0% | |
| AGATTTCGCAATTTGAGAAC+TGG | + | chr1_2:72942579-72942598 | None:intergenic | 35.0% | |
| CCACATTATGCTCAAACTTA+TGG | + | chr1_2:72942637-72942656 | None:intergenic | 35.0% | |
| CCATAAGTTTGAGCATAATG+TGG | - | chr1_2:72942634-72942653 | Msa0090850:intron | 35.0% | |
| TCAATGACAATCAGATTTGG+TGG | + | chr1_2:72942680-72942699 | None:intergenic | 35.0% | |
| TGCAACTTCAAATCTAATCC+AGG | + | chr1_2:72942743-72942762 | None:intergenic | 35.0% | |
| AGAAATAGGTTTGAGGATCT+TGG | - | chr1_2:72942770-72942789 | Msa0090850:intron | 35.0% | |
| ATCTTGGAATTGTTCGAAGT+AGG | - | chr1_2:72942786-72942805 | Msa0090850:intron | 35.0% | |
| TGATGTGCCATAATAGGATT+GGG | + | chr1_2:72942812-72942831 | None:intergenic | 35.0% | |
| CTTATCATTCTGTCTTAGTC+TGG | + | chr1_2:72942836-72942855 | None:intergenic | 35.0% | |
| CCACCAAGAAAACAAAATCA+CGG | - | chr1_2:72943010-72943029 | Msa0090850:CDS | 35.0% | |
| CACCAAGAAAACAAAATCAC+GGG | - | chr1_2:72943011-72943030 | Msa0090850:CDS | 35.0% | |
| GATAGATTTCCAGTGGATAT+TGG | - | chr1_2:72943041-72943060 | Msa0090850:intron | 35.0% | |
| !! | ATTGGCCTTGGATAATAAAG+GGG | - | chr1_2:72943059-72943078 | Msa0090850:intron | 35.0% |
| TAAAGTTGTTGTCATGTGAC+TGG | - | chr1_2:72943099-72943118 | Msa0090850:intron | 35.0% | |
| AGGCTCTTGTGTAAAAAACA+TGG | - | chr1_2:72943149-72943168 | Msa0090850:intron | 35.0% | |
| TCATCCGAGTCCAATAAAAA+GGG | + | chr1_2:72943254-72943273 | None:intergenic | 35.0% | |
| ATCATCCGAGTCCAATAAAA+AGG | + | chr1_2:72943255-72943274 | None:intergenic | 35.0% | |
| TATTGGACTCGGATGATAAT+TGG | - | chr1_2:72943258-72943277 | Msa0090850:intron | 35.0% | |
| AATACCATACAACGCAATTG+AGG | + | chr1_2:72943284-72943303 | None:intergenic | 35.0% | |
| CGTTGTATGGTATTTGTAGT+TGG | - | chr1_2:72943290-72943309 | Msa0090850:intron | 35.0% | |
| CACTACAATTGAATCCACAA+TGG | + | chr1_2:72943499-72943518 | None:intergenic | 35.0% | |
| GATTATGTACCCGAAACAAA+TGG | + | chr1_2:72943842-72943861 | None:intergenic | 35.0% | |
| !!! | TTTGGCTTTTCACATTCTTG+TGG | - | chr1_2:72944010-72944029 | Msa0090850:intron | 35.0% |
| !!! | TTGTGGTTTTGTCTTTATGG+AGG | - | chr1_2:72944027-72944046 | Msa0090850:CDS | 35.0% |
| AAACCGTGTATTAGATTGGA+TGG | - | chr1_2:72944073-72944092 | Msa0090850:intron | 35.0% | |
| CGTATTTGTAGCCATAATTG+AGG | - | chr1_2:72944153-72944172 | Msa0090850:intron | 35.0% | |
| AATACTTGGTCCCTCAATTA+TGG | + | chr1_2:72944167-72944186 | None:intergenic | 35.0% | |
| ATGAATAAATCTGTCTGTCC+AGG | + | chr1_2:72944275-72944294 | None:intergenic | 35.0% | |
| GGATTTGTGAAGTGGAAAAT+GGG | - | chr1_2:72944779-72944798 | Msa0090850:intron | 35.0% | |
| !! | AACTTGCTGATGAAAAGCAT+TGG | - | chr1_2:72944917-72944936 | Msa0090850:intron | 35.0% |
| !! | ACTTGCTGATGAAAAGCATT+GGG | - | chr1_2:72944918-72944937 | Msa0090850:intron | 35.0% |
| AGAGCTTGAGAGAAAGAAAT+GGG | + | chr1_2:72945115-72945134 | None:intergenic | 35.0% | |
| AAGAGCTTGAGAGAAAGAAA+TGG | + | chr1_2:72945116-72945135 | None:intergenic | 35.0% | |
| !!! | CTCTCAAGCTCTTTTTAAGT+TGG | - | chr1_2:72945123-72945142 | Msa0090850:intron | 35.0% |
| TCGCCTATTAGAGAATAACA+AGG | + | chr1_2:72945158-72945177 | None:intergenic | 35.0% | |
| ! | TTGTTATTCTCTAATAGGCG+AGG | - | chr1_2:72945157-72945176 | Msa0090850:intron | 35.0% |
| CATTTGGCCATTAACACATT+AGG | + | chr1_2:72945417-72945436 | None:intergenic | 35.0% | |
| CTAATGTGTTAATGGCCAAA+TGG | - | chr1_2:72945415-72945434 | Msa0090850:intron | 35.0% | |
| TCCATTTCATCTAAGCACTA+TGG | - | chr1_2:72945513-72945532 | Msa0090850:intron | 35.0% | |
| TCCATAGTGCTTAGATGAAA+TGG | + | chr1_2:72945517-72945536 | None:intergenic | 35.0% | |
| TTGATACACAAATTGCACGA+AGG | + | chr1_2:72945708-72945727 | None:intergenic | 35.0% | |
| TTTGGCACTATTTCCTATTG+TGG | + | chr1_2:72946070-72946089 | None:intergenic | 35.0% | |
| AATAGGAAATAGTGCCAAAG+AGG | - | chr1_2:72946071-72946090 | Msa0090850:intron | 35.0% | |
| ! | TCCATTTTCAGTATCCTCTT+TGG | + | chr1_2:72946088-72946107 | None:intergenic | 35.0% |
| ACATGAATGATACATCCCAT+AGG | - | chr1_2:72946212-72946231 | Msa0090850:intron | 35.0% | |
| AATTATCAGAGCCTACCTAT+GGG | + | chr1_2:72946230-72946249 | None:intergenic | 35.0% | |
| TAATCAGCATTGTTGACAAG+TGG | - | chr1_2:72946347-72946366 | Msa0090850:CDS | 35.0% | |
| ATATATGTCTCGTATGCAGA+AGG | - | chr1_2:72946415-72946434 | Msa0090850:intron | 35.0% | |
| TATGCAGAAGGTTTATTCCT+GGG | - | chr1_2:72946427-72946446 | Msa0090850:intron | 35.0% | |
| CATATCAATGTTCACAGAAC+TGG | + | chr1_2:72946647-72946666 | None:intergenic | 35.0% | |
| GACATTACTGGCATTCAATT+CGG | + | chr1_2:72946678-72946697 | None:intergenic | 35.0% | |
| CACTTGATTGAAGACATTAC+TGG | + | chr1_2:72946690-72946709 | None:intergenic | 35.0% | |
| AAACTCCAGTTATGGAGTAA+AGG | + | chr1_2:72946828-72946847 | None:intergenic | 35.0% | |
| !! | ATATGCATTTTCAGGGACAT+AGG | + | chr1_2:72946851-72946870 | None:intergenic | 35.0% |
| TAGCTTATACGTTTGATGCA+GGG | - | chr1_2:72947016-72947035 | Msa0090850:intron | 35.0% | |
| !! | AACTTAAAAAGCACCTGTTG+AGG | + | chr1_2:72947131-72947150 | None:intergenic | 35.0% |
| TCACCAATAATGTAACTGGA+GGG | + | chr1_2:72947231-72947250 | None:intergenic | 35.0% | |
| CTTGTCACCAATAATGTAAC+TGG | + | chr1_2:72947235-72947254 | None:intergenic | 35.0% | |
| AAGTCAATTGCAAAAGATGC+TGG | - | chr1_2:72947252-72947271 | Msa0090850:CDS | 35.0% | |
| AGTCAATTGCAAAAGATGCT+GGG | - | chr1_2:72947253-72947272 | Msa0090850:CDS | 35.0% | |
| ! | TTGTCTTTAATTTCTGGAGG+TGG | + | chr1_2:72947312-72947331 | None:intergenic | 35.0% |
| ! | TTCCATCACAAAAGTACAAG+GGG | - | chr1_2:72947334-72947353 | Msa0090850:five_prime_UTR | 35.0% |
| CTCTTCTCAACAGTGAAAAT+GGG | - | chr1_2:72947424-72947443 | Msa0090850:five_prime_UTR | 35.0% | |
| TTTCTTAGATGACCCTTTCA+AGG | - | chr1_2:72947536-72947555 | Msa0090850:five_prime_UTR | 35.0% | |
| AACAAGGAAAGAGTTAGGGT+AGG | - | chr1_2:72941123-72941142 | Msa0090850:three_prime_UTR | 40.0% | |
| GAGAAGAGAATCCATCCAAA+TGG | - | chr1_2:72941150-72941169 | Msa0090850:three_prime_UTR | 40.0% | |
| CTGAGTAACAGATCTAAGTG+AGG | + | chr1_2:72941301-72941320 | None:intergenic | 40.0% | |
| TTGATCACAGCAATGTTGGT+TGG | + | chr1_2:72941399-72941418 | None:intergenic | 40.0% | |
| CCACATACGATCTTGTTGAA+AGG | + | chr1_2:72941532-72941551 | None:intergenic | 40.0% | |
| CCTTTCAACAAGATCGTATG+TGG | - | chr1_2:72941529-72941548 | Msa0090850:CDS | 40.0% | |
| ATGAAGCACAGACACATACA+CGG | + | chr1_2:72941898-72941917 | None:intergenic | 40.0% | |
| !! | TTCGTTTTGTCGGTTAGTGT+AGG | - | chr1_2:72942191-72942210 | Msa0090850:intron | 40.0% |
| GTAGGAAATTTCTCTTTCCG+GGG | - | chr1_2:72942209-72942228 | Msa0090850:intron | 40.0% | |
| TAGGAAATTTCTCTTTCCGG+GGG | - | chr1_2:72942210-72942229 | Msa0090850:intron | 40.0% | |
| GAAGATTCCAGAGCTGTTTA+AGG | - | chr1_2:72942232-72942251 | Msa0090850:intron | 40.0% | |
| TTAAGATCACCAAGGAGGAT+TGG | - | chr1_2:72942301-72942320 | Msa0090850:intron | 40.0% | |
| GATCTAAATCAAACAGGTCC+TGG | - | chr1_2:72942722-72942741 | Msa0090850:intron | 40.0% | |
| AAGTAGGCCCAATCCTATTA+TGG | - | chr1_2:72942802-72942821 | Msa0090850:intron | 40.0% | |
| CTGATGTGCCATAATAGGAT+TGG | + | chr1_2:72942813-72942832 | None:intergenic | 40.0% | |
| ! | TGAAGTCGATTTCCTGAGTT+TGG | + | chr1_2:72942913-72942932 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTCTTGGTGGACC+TGG | + | chr1_2:72943007-72943026 | None:intergenic | 40.0% |
| !!! | CCGTGATTTTGTTTTCTTGG+TGG | + | chr1_2:72943013-72943032 | None:intergenic | 40.0% |
| !!! | TGCCCGTGATTTTGTTTTCT+TGG | + | chr1_2:72943016-72943035 | None:intergenic | 40.0% |
| !! | TTGGCCTTGGATAATAAAGG+GGG | - | chr1_2:72943060-72943079 | Msa0090850:intron | 40.0% |
| ACAACTTTACCTTTGCACCA+AGG | + | chr1_2:72943088-72943107 | None:intergenic | 40.0% | |
| ! | TTACACAAGAGCCTGTTTTC+AGG | + | chr1_2:72943143-72943162 | None:intergenic | 40.0% |
| TTCTATGACTGCAGCTAATC+TGG | + | chr1_2:72943318-72943337 | None:intergenic | 40.0% | |
| TGAATCCACAATGGTGAGAA+CGG | + | chr1_2:72943490-72943509 | None:intergenic | 40.0% | |
| GAAAGAAAGAATATCGACGG+CGG | + | chr1_2:72943536-72943555 | None:intergenic | 40.0% | |
| !! | AAAGAGAAGATTGGTGATGG+CGG | + | chr1_2:72943591-72943610 | None:intergenic | 40.0% |
| GAGAAAGAGAAGATTGGTGA+TGG | + | chr1_2:72943594-72943613 | None:intergenic | 40.0% | |
| GAGAGTGAGAAAGAGAAGAT+TGG | + | chr1_2:72943600-72943619 | None:intergenic | 40.0% | |
| ACTTCTGGTGTCTGGAAATT+TGG | - | chr1_2:72943992-72944011 | Msa0090850:intron | 40.0% | |
| CCACCATCCAATCTAATACA+CGG | + | chr1_2:72944079-72944098 | None:intergenic | 40.0% | |
| GATTCACTGCAGTTAGTGAA+AGG | + | chr1_2:72944127-72944146 | None:intergenic | 40.0% | |
| !! | TACATGGCGGAGTATTGAAT+TGG | + | chr1_2:72944243-72944262 | None:intergenic | 40.0% |
| CAGGAAAAAGTTCTACATGG+CGG | + | chr1_2:72944256-72944275 | None:intergenic | 40.0% | |
| GTCCAGGAAAAAGTTCTACA+TGG | + | chr1_2:72944259-72944278 | None:intergenic | 40.0% | |
| AGTTACAGTAGCATGGTTCT+TGG | - | chr1_2:72944469-72944488 | Msa0090850:intron | 40.0% | |
| ! | TGTTTTGCAGTTTATGCCCT+GGG | - | chr1_2:72944559-72944578 | Msa0090850:intron | 40.0% |
| ! | ACTTGCAAGGTGTTATGACT+TGG | - | chr1_2:72944658-72944677 | Msa0090850:intron | 40.0% |
| !! | CAAGGTGTTATGACTTGGTT+TGG | - | chr1_2:72944663-72944682 | Msa0090850:intron | 40.0% |
| ACTATATACAGGCAAGGATC+AGG | - | chr1_2:72944731-72944750 | Msa0090850:intron | 40.0% | |
| AGTGCTTGTCGTAGCTTATT+TGG | - | chr1_2:72944755-72944774 | Msa0090850:intron | 40.0% | |
| GTGCTTGTCGTAGCTTATTT+GGG | - | chr1_2:72944756-72944775 | Msa0090850:intron | 40.0% | |
| TGCTTGTCGTAGCTTATTTG+GGG | - | chr1_2:72944757-72944776 | Msa0090850:intron | 40.0% | |
| TATTTGGGGGATTTGTGAAG+TGG | - | chr1_2:72944771-72944790 | Msa0090850:intron | 40.0% | |
| GGGATTTGTGAAGTGGAAAA+TGG | - | chr1_2:72944778-72944797 | Msa0090850:intron | 40.0% | |
| ! | GAATGGAAGTGATAGTCTTG+CGG | - | chr1_2:72944891-72944910 | Msa0090850:intron | 40.0% |
| ! | GAGAGTCGACTTCAAATCAA+AGG | + | chr1_2:72945207-72945226 | None:intergenic | 40.0% |
| ! | GCTTTTACAGCATAGAGCAA+AGG | - | chr1_2:72945668-72945687 | Msa0090850:intron | 40.0% |
| CACAAATTGCACGAAGGAAA+GGG | + | chr1_2:72945702-72945721 | None:intergenic | 40.0% | |
| ACACAAATTGCACGAAGGAA+AGG | + | chr1_2:72945703-72945722 | None:intergenic | 40.0% | |
| !!! | AGGTTTTAGGAAAAGAGGGA+GGG | + | chr1_2:72945817-72945836 | None:intergenic | 40.0% |
| !!! | AAGGTTTTAGGAAAAGAGGG+AGG | + | chr1_2:72945818-72945837 | None:intergenic | 40.0% |
| TAAGATGCTTGAAAGTAGGG+AGG | + | chr1_2:72945862-72945881 | None:intergenic | 40.0% | |
| GCCAAAGAGGATACTGAAAA+TGG | - | chr1_2:72946084-72946103 | Msa0090850:intron | 40.0% | |
| TGCAAAATCACGGTTTCGAA+TGG | + | chr1_2:72946116-72946135 | None:intergenic | 40.0% | |
| TGCATGAAACTGGTTGCTAT+CGG | + | chr1_2:72946161-72946180 | None:intergenic | 40.0% | |
| GAATGATACATCCCATAGGT+AGG | - | chr1_2:72946216-72946235 | Msa0090850:intron | 40.0% | |
| CAATTATCAGAGCCTACCTA+TGG | + | chr1_2:72946231-72946250 | None:intergenic | 40.0% | |
| GTATGCAGAAGGTTTATTCC+TGG | - | chr1_2:72946426-72946445 | Msa0090850:intron | 40.0% | |
| ATGCAGAAGGTTTATTCCTG+GGG | - | chr1_2:72946428-72946447 | Msa0090850:intron | 40.0% | |
| ATGCACTTCATCACATTAGC+TGG | + | chr1_2:72946720-72946739 | None:intergenic | 40.0% | |
| GACATAGGAAACTCCAGTTA+TGG | + | chr1_2:72946836-72946855 | None:intergenic | 40.0% | |
| !!! | AACTTCTAGTTTTGACGTGC+AGG | - | chr1_2:72946993-72947012 | Msa0090850:intron | 40.0% |
| GTAGCTTATACGTTTGATGC+AGG | - | chr1_2:72947015-72947034 | Msa0090850:intron | 40.0% | |
| ! | CGGTTCTAATTGCACGTAAT+AGG | - | chr1_2:72947046-72947065 | Msa0090850:intron | 40.0% |
| TGAGGTCATCTGAATTTGGA+GGG | + | chr1_2:72947113-72947132 | None:intergenic | 40.0% | |
| TTGAGGTCATCTGAATTTGG+AGG | + | chr1_2:72947114-72947133 | None:intergenic | 40.0% | |
| CTGTTGAGGTCATCTGAATT+TGG | + | chr1_2:72947117-72947136 | None:intergenic | 40.0% | |
| CAAATTCAGATGACCTCAAC+AGG | - | chr1_2:72947115-72947134 | Msa0090850:CDS | 40.0% | |
| CTTCCCTCCAGTTACATTAT+TGG | - | chr1_2:72947225-72947244 | Msa0090850:CDS | 40.0% | |
| GTCACCAATAATGTAACTGG+AGG | + | chr1_2:72947232-72947251 | None:intergenic | 40.0% | |
| ! | TCTTTAATTTCTGGAGGTGG+TGG | + | chr1_2:72947309-72947328 | None:intergenic | 40.0% |
| ! | TCCATCACAAAAGTACAAGG+GGG | - | chr1_2:72947335-72947354 | Msa0090850:five_prime_UTR | 40.0% |
| TACTTTATATGCACCAGACC+AGG | - | chr1_2:72947366-72947385 | Msa0090850:five_prime_UTR | 40.0% | |
| CTTTCATCAGTAAGCACAAC+AGG | + | chr1_2:72947399-72947418 | None:intergenic | 40.0% | |
| GCTCTTCTCAACAGTGAAAA+TGG | - | chr1_2:72947423-72947442 | Msa0090850:five_prime_UTR | 40.0% | |
| ! | GAAAATGGGCTTCCCAAATA+AGG | - | chr1_2:72947438-72947457 | Msa0090850:five_prime_UTR | 40.0% |
| GCTTCCCAAATAAGGTACAT+GGG | - | chr1_2:72947446-72947465 | Msa0090850:five_prime_UTR | 40.0% | |
| GTACATGGGAAATATTCCCA+TGG | - | chr1_2:72947460-72947479 | Msa0090850:five_prime_UTR | 40.0% | |
| CTTCATTAGGCTTATCTGTC+CGG | - | chr1_2:72947493-72947512 | Msa0090850:five_prime_UTR | 40.0% | |
| TACAACAGGCTTCCTTGAAA+GGG | + | chr1_2:72947551-72947570 | None:intergenic | 40.0% | |
| AATCATGTCATGGGTACAAC+AGG | + | chr1_2:72947565-72947584 | None:intergenic | 40.0% | |
| GAGGTCCCGTAAACAAAACA+AGG | - | chr1_2:72941107-72941126 | Msa0090850:three_prime_UTR | 45.0% | |
| AAGCAGCAGTAGAACGAAGA+AGG | - | chr1_2:72941191-72941210 | Msa0090850:CDS | 45.0% | |
| AGCAGCAGTAGAACGAAGAA+GGG | - | chr1_2:72941192-72941211 | Msa0090850:CDS | 45.0% | |
| ACTAACAGAAACGGTGGTAG+TGG | + | chr1_2:72941505-72941524 | None:intergenic | 45.0% | |
| CAAGATCGTATGTGGCTCAA+TGG | - | chr1_2:72941537-72941556 | Msa0090850:CDS | 45.0% | |
| ! | GACACTAACACTAGCACTGA+TGG | + | chr1_2:72941704-72941723 | None:intergenic | 45.0% |
| GTTAGTGTCAATGTCCTCTC+TGG | - | chr1_2:72941715-72941734 | Msa0090850:intron | 45.0% | |
| GTCAGTATTAGTGTCGTGTC+TGG | - | chr1_2:72942004-72942023 | Msa0090850:intron | 45.0% | |
| GGGTATTAAGATCACCAAGG+AGG | - | chr1_2:72942296-72942315 | Msa0090850:intron | 45.0% | |
| ! | CAATTTGCTCCAATCCTCCT+TGG | + | chr1_2:72942313-72942332 | None:intergenic | 45.0% |
| ! | ATAATGTGGGCTGCATTGCA+TGG | - | chr1_2:72942648-72942667 | Msa0090850:intron | 45.0% |
| ! | TAATGTGGGCTGCATTGCAT+GGG | - | chr1_2:72942649-72942668 | Msa0090850:intron | 45.0% |
| TCTGGCTGATGTGCCATAAT+AGG | + | chr1_2:72942818-72942837 | None:intergenic | 45.0% | |
| CAGTGACGATAGATTTCCAG+TGG | - | chr1_2:72943034-72943053 | Msa0090850:intron | 45.0% | |
| ! | TTTCCAGTGGATATTGGCCT+TGG | - | chr1_2:72943047-72943066 | Msa0090850:intron | 45.0% |
| TATCCAAGGCCAATATCCAC+TGG | + | chr1_2:72943053-72943072 | None:intergenic | 45.0% | |
| ! | TGGCCTTGGATAATAAAGGG+GGG | - | chr1_2:72943061-72943080 | Msa0090850:intron | 45.0% |
| GTTGTTGTCATGTGACTGGA+AGG | - | chr1_2:72943103-72943122 | Msa0090850:intron | 45.0% | |
| CAGGTTCAAGTCCTGAAAAC+AGG | - | chr1_2:72943129-72943148 | Msa0090850:intron | 45.0% | |
| GCTGCGTACAATTCACCAAT+TGG | - | chr1_2:72943176-72943195 | Msa0090850:intron | 45.0% | |
| GCGTACAATTCACCAATTGG+CGG | - | chr1_2:72943179-72943198 | Msa0090850:intron | 45.0% | |
| CGTACAATTCACCAATTGGC+GGG | - | chr1_2:72943180-72943199 | Msa0090850:intron | 45.0% | |
| CTAAAGCTCCTGCATAAGCA+GGG | + | chr1_2:72943219-72943238 | None:intergenic | 45.0% | |
| ACTAAAGCTCCTGCATAAGC+AGG | + | chr1_2:72943220-72943239 | None:intergenic | 45.0% | |
| ! | GCTGCCCTTTTTATTGGACT+CGG | - | chr1_2:72943247-72943266 | Msa0090850:intron | 45.0% |
| TTGGCCTCAATTGCGTTGTA+TGG | - | chr1_2:72943277-72943296 | Msa0090850:intron | 45.0% | |
| GTCTAACTGCAGTGACTGTA+GGG | + | chr1_2:72943341-72943360 | None:intergenic | 45.0% | |
| TGTCTAACTGCAGTGACTGT+AGG | + | chr1_2:72943342-72943361 | None:intergenic | 45.0% | |
| AATGGTGAGAACGGTGAAGA+AGG | + | chr1_2:72943481-72943500 | None:intergenic | 45.0% | |
| GAATCGGTGGCCATTTGTTT+CGG | - | chr1_2:72943829-72943848 | Msa0090850:intron | 45.0% | |
| AATCGGTGGCCATTTGTTTC+GGG | - | chr1_2:72943830-72943849 | Msa0090850:intron | 45.0% | |
| ! | TGTTTCGGGTACATAATCGG+TGG | - | chr1_2:72943844-72943863 | Msa0090850:CDS | 45.0% |
| ATTTCCAGACACCAGAAGTC+TGG | + | chr1_2:72943991-72944010 | None:intergenic | 45.0% | |
| CCGTGTATTAGATTGGATGG+TGG | - | chr1_2:72944076-72944095 | Msa0090850:intron | 45.0% | |
| !! | CGCCATGTAGAACTTTTTCC+TGG | - | chr1_2:72944254-72944273 | Msa0090850:intron | 45.0% |
| ! | CTGTTTTGCAGTTTATGCCC+TGG | - | chr1_2:72944558-72944577 | Msa0090850:intron | 45.0% |
| ! | GTTTTGCAGTTTATGCCCTG+GGG | - | chr1_2:72944560-72944579 | Msa0090850:intron | 45.0% |
| ! | GACATTCATTAGCTTCCCCA+GGG | + | chr1_2:72944578-72944597 | None:intergenic | 45.0% |
| ! | TGACATTCATTAGCTTCCCC+AGG | + | chr1_2:72944579-72944598 | None:intergenic | 45.0% |
| GCTTGTCGTAGCTTATTTGG+GGG | - | chr1_2:72944758-72944777 | Msa0090850:intron | 45.0% | |
| ! | GATTTGAAGTCGACTCTCAC+TGG | - | chr1_2:72945209-72945228 | Msa0090850:intron | 45.0% |
| AATCTAGCACAGCTGCCATT+TGG | + | chr1_2:72945433-72945452 | None:intergenic | 45.0% | |
| AACAGTATCACGCATTCCTG+AGG | + | chr1_2:72945637-72945656 | None:intergenic | 45.0% | |
| !!! | GTTTTAGGAAAAGAGGGAGG+GGG | + | chr1_2:72945815-72945834 | None:intergenic | 45.0% |
| !!! | GGTTTTAGGAAAAGAGGGAG+GGG | + | chr1_2:72945816-72945835 | None:intergenic | 45.0% |
| AAACTGGTTGCTATCGGTAC+AGG | + | chr1_2:72946155-72946174 | None:intergenic | 45.0% | |
| CCAGACAAACTGCATGAAAC+TGG | + | chr1_2:72946171-72946190 | None:intergenic | 45.0% | |
| CCAGTTTCATGCAGTTTGTC+TGG | - | chr1_2:72946168-72946187 | Msa0090850:intron | 45.0% | |
| TCACAGAACTGGAGATCACA+TGG | + | chr1_2:72946636-72946655 | None:intergenic | 45.0% | |
| GCAAAAGATGCTGGGATCAA+TGG | - | chr1_2:72947261-72947280 | Msa0090850:CDS | 45.0% | |
| TGCTGGGATCAATGGAATAG+AGG | - | chr1_2:72947269-72947288 | Msa0090850:CDS | 45.0% | |
| ! | TCCCCCTTGTACTTTTGTGA+TGG | + | chr1_2:72947339-72947358 | None:intergenic | 45.0% |
| TTATATGCACCAGACCAGGA+AGG | - | chr1_2:72947370-72947389 | Msa0090850:five_prime_UTR | 45.0% | |
| TATATGCACCAGACCAGGAA+GGG | - | chr1_2:72947371-72947390 | Msa0090850:five_prime_UTR | 45.0% | |
| GGCTTCCCAAATAAGGTACA+TGG | - | chr1_2:72947445-72947464 | Msa0090850:five_prime_UTR | 45.0% | |
| GTACAACAGGCTTCCTTGAA+AGG | + | chr1_2:72947552-72947571 | None:intergenic | 45.0% | |
| GCAGCAGTAGAACGAAGAAG+GGG | - | chr1_2:72941193-72941212 | Msa0090850:CDS | 50.0% | |
| !! | TGGAAATGGCGGGTGATAGT+TGG | - | chr1_2:72941349-72941368 | Msa0090850:CDS | 50.0% |
| !! | GGAAATGGCGGGTGATAGTT+GGG | - | chr1_2:72941350-72941369 | Msa0090850:CDS | 50.0% |
| !! | GGGTGATAGTTGGGTACTGA+TGG | - | chr1_2:72941359-72941378 | Msa0090850:CDS | 50.0% |
| GTAGTGGTGCAAAGATGAGC+GGG | + | chr1_2:72941489-72941508 | None:intergenic | 50.0% | |
| ! | GGTAGTGGTGCAAAGATGAG+CGG | + | chr1_2:72941490-72941509 | None:intergenic | 50.0% |
| GGAAGGACTAACAGAAACGG+TGG | + | chr1_2:72941511-72941530 | None:intergenic | 50.0% | |
| TCGTATGTGGCTCAATGGCA+AGG | - | chr1_2:72941542-72941561 | Msa0090850:CDS | 50.0% | |
| CAAATACACGGACACCAGAG+AGG | + | chr1_2:72941732-72941751 | None:intergenic | 50.0% | |
| CAGACACGCAACACTAACAC+TGG | + | chr1_2:72941871-72941890 | None:intergenic | 50.0% | |
| GCGCAGAGAGACATATTTCG+TGG | + | chr1_2:72942117-72942136 | None:intergenic | 50.0% | |
| GGATCTCCCTTAAACAGCTC+TGG | + | chr1_2:72942242-72942261 | None:intergenic | 50.0% | |
| TGCAGTGGGGAAGTTGTTGT+AGG | + | chr1_2:72942352-72942371 | None:intergenic | 50.0% | |
| !! | TGGATTGGCTTCATCAGCTG+CGG | - | chr1_2:72942374-72942393 | Msa0090850:intron | 50.0% |
| GGCCTTGGATAATAAAGGGG+GGG | - | chr1_2:72943062-72943081 | Msa0090850:intron | 50.0% | |
| TCATGTGACTGGAAGGTCAC+AGG | - | chr1_2:72943110-72943129 | Msa0090850:intron | 50.0% | |
| ! | CACCAGGCTGCCCTTTTTAT+TGG | - | chr1_2:72943241-72943260 | Msa0090850:intron | 50.0% |
| GTCCAATAAAAAGGGCAGCC+TGG | + | chr1_2:72943246-72943265 | None:intergenic | 50.0% | |
| AGAAGGTCAGGGGAAAACGT+GGG | + | chr1_2:72943464-72943483 | None:intergenic | 50.0% | |
| AAGAAGGTCAGGGGAAAACG+TGG | + | chr1_2:72943465-72943484 | None:intergenic | 50.0% | |
| AGAACGGTGAAGAAGGTCAG+GGG | + | chr1_2:72943474-72943493 | None:intergenic | 50.0% | |
| GAGAACGGTGAAGAAGGTCA+GGG | + | chr1_2:72943475-72943494 | None:intergenic | 50.0% | |
| TGAGAACGGTGAAGAAGGTC+AGG | + | chr1_2:72943476-72943495 | None:intergenic | 50.0% | |
| CTTCACCGTTCTCACCATTG+TGG | - | chr1_2:72943482-72943501 | Msa0090850:intron | 50.0% | |
| GAGTAGCAGTTCCAGACTTC+TGG | - | chr1_2:72943977-72943996 | Msa0090850:intron | 50.0% | |
| AGTTCCAGACTTCTGGTGTC+TGG | - | chr1_2:72943984-72944003 | Msa0090850:intron | 50.0% | |
| ACCTTGCAATAGCAGACAGC+TGG | + | chr1_2:72944615-72944634 | None:intergenic | 50.0% | |
| ! | CTAGGTTAGCTCTCGGCAAA+AGG | - | chr1_2:72945599-72945618 | Msa0090850:intron | 50.0% |
| AAGGAAACTAGCAGCACCTC+AGG | - | chr1_2:72945618-72945637 | Msa0090850:intron | 50.0% | |
| GCTTGAAAGTAGGGAGGTCT+TGG | + | chr1_2:72945856-72945875 | None:intergenic | 50.0% | |
| CCTGTGGAGCTTCTTCTGAA+CGG | + | chr1_2:72946375-72946394 | None:intergenic | 50.0% | |
| CGTGCAATTAGAACCGCGTT+TGG | + | chr1_2:72947042-72947061 | None:intergenic | 50.0% | |
| ! | TGGAGGGAAGAGAGTTTTGC+AGG | + | chr1_2:72947215-72947234 | None:intergenic | 50.0% |
| ATATGCACCAGACCAGGAAG+GGG | - | chr1_2:72947372-72947391 | Msa0090850:five_prime_UTR | 50.0% | |
| !! | ACAGCTCTGGAATCTTCCCC+CGG | + | chr1_2:72942229-72942248 | None:intergenic | 55.0% |
| AACAACTTCCCCACTGCAGC+TGG | - | chr1_2:72942354-72942373 | Msa0090850:intron | 55.0% | |
| AAGCCAATCCAGCTGCAGTG+GGG | + | chr1_2:72942365-72942384 | None:intergenic | 55.0% | |
| GAAGCCAATCCAGCTGCAGT+GGG | + | chr1_2:72942366-72942385 | None:intergenic | 55.0% | |
| TGAAGCCAATCCAGCTGCAG+TGG | + | chr1_2:72942367-72942386 | None:intergenic | 55.0% | |
| !! | GGATTGGCTTCATCAGCTGC+GGG | - | chr1_2:72942375-72942394 | Msa0090850:intron | 55.0% |
| GGCCCCCCCTTTATTATCCA+AGG | + | chr1_2:72943067-72943086 | None:intergenic | 55.0% | |
| GGATAATAAAGGGGGGGCCT+TGG | - | chr1_2:72943068-72943087 | Msa0090850:intron | 55.0% | |
| CATAAGCAGGGTTCGGGAAG+GGG | + | chr1_2:72943207-72943226 | None:intergenic | 55.0% | |
| GCATAAGCAGGGTTCGGGAA+GGG | + | chr1_2:72943208-72943227 | None:intergenic | 55.0% | |
| TGCATAAGCAGGGTTCGGGA+AGG | + | chr1_2:72943209-72943228 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCTTATGC+AGG | - | chr1_2:72943208-72943227 | Msa0090850:intron | 55.0% | |
| CTCCTGCATAAGCAGGGTTC+GGG | + | chr1_2:72943213-72943232 | None:intergenic | 55.0% | |
| GCTCCTGCATAAGCAGGGTT+CGG | + | chr1_2:72943214-72943233 | None:intergenic | 55.0% | |
| ! | TGCAGGAGCTTTAGTGCACC+AGG | - | chr1_2:72943225-72943244 | Msa0090850:intron | 55.0% |
| AGCCAACGCCAGACAGATGA+CGG | + | chr1_2:72943633-72943652 | None:intergenic | 55.0% | |
| CTGGAACTGCTACTCTGTGC+TGG | + | chr1_2:72943972-72943991 | None:intergenic | 55.0% | |
| GCCAGCTGTCTGCTATTGCA+AGG | - | chr1_2:72944611-72944630 | Msa0090850:intron | 55.0% | |
| ! | GTCGACTCTCACTGGAAGTG+CGG | - | chr1_2:72945217-72945236 | Msa0090850:intron | 55.0% |
| CCGTTCAGAAGAAGCTCCAC+AGG | - | chr1_2:72946372-72946391 | Msa0090850:CDS | 55.0% | |
| GTTTGATGCAGGGCCAAACG+CGG | - | chr1_2:72947026-72947045 | Msa0090850:intron | 55.0% | |
| CAACATCACACGCGCGAGCA+CGG | + | chr1_2:72942263-72942282 | None:intergenic | 60.0% | |
| TGCTCGCGCGTGTGATGTTG+AGG | - | chr1_2:72942263-72942282 | Msa0090850:CDS | 60.0% | |
| CTTCCCCACTGCAGCTGGAT+TGG | - | chr1_2:72942359-72942378 | Msa0090850:intron | 60.0% | |
| GCTGCGGGTTTCGCTTGTCT+TGG | - | chr1_2:72942390-72942409 | Msa0090850:intron | 60.0% | |
| TCTCCCTGCCGTCATCTGTC+TGG | - | chr1_2:72943622-72943641 | Msa0090850:intron | 60.0% | |
| ! | ACGCCAGACAGATGACGGCA+GGG | + | chr1_2:72943628-72943647 | None:intergenic | 60.0% |
| ! | AACGCCAGACAGATGACGGC+AGG | + | chr1_2:72943629-72943648 | None:intergenic | 60.0% |
| TGCCGTCATCTGTCTGGCGT+TGG | - | chr1_2:72943628-72943647 | Msa0090850:intron | 60.0% | |
| !! | CATCTGTCTGGCGTTGGCTG+CGG | - | chr1_2:72943634-72943653 | Msa0090850:intron | 60.0% |
| AAAAGAGGGAGGGGGAGAGG+TGG | + | chr1_2:72945807-72945826 | None:intergenic | 60.0% | |
| AGGAAAAGAGGGAGGGGGAG+AGG | + | chr1_2:72945810-72945829 | None:intergenic | 60.0% | |
| AACAGGTCCCCTTCCTGGTC+TGG | + | chr1_2:72947382-72947401 | None:intergenic | 60.0% | |
| AGCACAACAGGTCCCCTTCC+TGG | + | chr1_2:72947387-72947406 | None:intergenic | 60.0% | |
| ! | AAGGGGGGGCCTTGGTGCAA+AGG | - | chr1_2:72943076-72943095 | Msa0090850:intron | 65.0% |
| !! | CTGGCGTTGGCTGCGGACAT+CGG | - | chr1_2:72943641-72943660 | Msa0090850:intron | 65.0% |
| CGGGAAGGGGTCCCGCCAAT+TGG | + | chr1_2:72943194-72943213 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 72941045 | 72947601 | 72941045 | ID=Msa0090850;Name=Msa0090850 |
| chr1_2 | mRNA | 72941045 | 72947601 | 72941045 | ID=Msa0090850-mRNA-1;Parent=Msa0090850;Name=Msa0090850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=309|1|1|1|0.88|1|10|143|418 |
| chr1_2 | exon | 72941045 | 72941410 | 72941045 | ID=Msa0090850-mRNA-1:exon:25406;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72941510 | 72941631 | 72941510 | ID=Msa0090850-mRNA-1:exon:25405;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72942253 | 72942301 | 72942253 | ID=Msa0090850-mRNA-1:exon:25404;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72942413 | 72942570 | 72942413 | ID=Msa0090850-mRNA-1:exon:25403;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72942957 | 72943043 | 72942957 | ID=Msa0090850-mRNA-1:exon:25402;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72943680 | 72943760 | 72943680 | ID=Msa0090850-mRNA-1:exon:25401;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72943841 | 72943904 | 72943841 | ID=Msa0090850-mRNA-1:exon:25400;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72944014 | 72944077 | 72944014 | ID=Msa0090850-mRNA-1:exon:25399;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72946235 | 72946433 | 72946235 | ID=Msa0090850-mRNA-1:exon:25398;Parent=Msa0090850-mRNA-1 |
| chr1_2 | exon | 72947083 | 72947601 | 72947083 | ID=Msa0090850-mRNA-1:exon:25397;Parent=Msa0090850-mRNA-1 |
| chr1_2 | five_prime_UTR | 72947293 | 72947601 | 72947293 | ID=Msa0090850-mRNA-1:five_prime_utr;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72947083 | 72947292 | 72947083 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72946235 | 72946433 | 72946235 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72944014 | 72944077 | 72944014 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72943841 | 72943904 | 72943841 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72943680 | 72943760 | 72943680 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72942957 | 72943043 | 72942957 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72942413 | 72942570 | 72942413 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72942253 | 72942301 | 72942253 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72941510 | 72941631 | 72941510 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | CDS | 72941188 | 72941410 | 72941188 | ID=Msa0090850-mRNA-1:cds;Parent=Msa0090850-mRNA-1 |
| chr1_2 | three_prime_UTR | 72941045 | 72941187 | 72941045 | ID=Msa0090850-mRNA-1:three_prime_utr;Parent=Msa0090850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
