Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754710 | sp|Q9LT75|PTN2A_ARATH | 61.824 | 592 | 187 | 13 | 21 | 587 | 34 | 611 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754710 | G7K591 | 97.785 | 587 | 13 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002420 | Msa0754710 | 0.806324 | 8.693361e-50 | -8.615850e-47 |
| Msa0660370 | Msa0754710 | 0.818780 | 1.639353e-52 | -8.615850e-47 |
| Msa0754710 | Msa0756610 | 0.980389 | 4.163547e-150 | -8.615850e-47 |
| Msa0754710 | Msa0810930 | 0.802091 | 6.612764e-49 | -8.615850e-47 |
| Msa0754710 | Msa0835930 | 0.980655 | 1.009236e-150 | -8.615850e-47 |
| Msa0754710 | Msa0851160 | 0.800190 | 1.618923e-48 | -8.615850e-47 |
| Msa0754710 | Msa0902360 | 0.800124 | 1.669839e-48 | -8.615850e-47 |
| Msa0754710 | Msa0982650 | 0.817453 | 3.271510e-52 | -8.615850e-47 |
| Msa0754710 | Msa0996820 | 0.807250 | 5.539213e-50 | -8.615850e-47 |
| Msa0754710 | Msa1207190 | 0.809798 | 1.583716e-50 | -8.615850e-47 |
| Msa0754710 | Msa1305250 | 0.802244 | 6.150366e-49 | -8.615850e-47 |
| Msa0754710 | Msa1306640 | 0.801257 | 9.807553e-49 | -8.615850e-47 |
| Msa0754710 | Msa1375280 | 0.820530 | 6.535163e-53 | -8.615850e-47 |
| Msa0754710 | Msa1414390 | 0.807730 | 4.382418e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754710 | MtrunA17_Chr5g0401771 | 97.785 | 587 | 13 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1206 |
| Msa0754710 | MtrunA17_Chr1g0208241 | 61.211 | 611 | 198 | 14 | 5 | 587 | 22 | 621 | 0.0 | 732 |
| Msa0754710 | MtrunA17_Chr7g0218331 | 40.860 | 186 | 100 | 2 | 114 | 299 | 36 | 211 | 1.79e-42 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754710 | AT3G19420.1 | 61.824 | 592 | 187 | 13 | 21 | 587 | 34 | 611 | 0.0 | 728 |
| Msa0754710 | AT3G50110.1 | 61.429 | 560 | 174 | 9 | 39 | 587 | 104 | 632 | 0.0 | 672 |
| Msa0754710 | AT5G39400.1 | 41.398 | 186 | 99 | 2 | 114 | 299 | 34 | 209 | 1.49e-42 | 158 |
Find 164 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCTTTCATCTTCTAAAA+TGG | 0.209199 | 5_2:-8423775 | Msa0754710:five_prime_UTR |
| GTTCAAATTTGTTAATATTC+AGG | 0.209677 | 5_2:-8417591 | Msa0754710:three_prime_UTR |
| AATGAACAACGACCACATTT+TGG | 0.230127 | 5_2:+8419564 | None:intergenic |
| GGGCAATTATGATCACTAAA+TGG | 0.238609 | 5_2:+8419647 | None:intergenic |
| GGCTTCACAAATGCCCTTAT+TGG | 0.245308 | 5_2:-8419042 | Msa0754710:CDS |
| GTGAATGATTCAATTATATT+AGG | 0.246164 | 5_2:+8422425 | None:intergenic |
| ATGTCAGATCCTTTGCTTGC+AGG | 0.261001 | 5_2:+8418044 | None:intergenic |
| ATGGATGGTCTAACCCAATA+AGG | 0.293918 | 5_2:+8419028 | None:intergenic |
| ACAGGAAGGTGGATTTGATT+TGG | 0.308292 | 5_2:-8421557 | Msa0754710:intron |
| GGATCATACCCACAGGTAAA+AGG | 0.314391 | 5_2:-8417543 | Msa0754710:three_prime_UTR |
| TGGGCGAGAAATCTGAAGTT+TGG | 0.316797 | 5_2:-8422572 | Msa0754710:CDS |
| CAGTTTCTAGTATATCTTCC+TGG | 0.317240 | 5_2:-8422592 | Msa0754710:CDS |
| TAAAAGGATCAGGCACATTA+TGG | 0.329095 | 5_2:-8417527 | Msa0754710:three_prime_UTR |
| TGCAACTGATTACAAATATA+TGG | 0.332393 | 5_2:-8417892 | Msa0754710:CDS |
| CCGTGCGTTCGTCATGCTGC+TGG | 0.336679 | 5_2:+8417796 | None:intergenic |
| GCTTCACAAATGCCCTTATT+GGG | 0.348878 | 5_2:-8419041 | Msa0754710:CDS |
| TTTGTCGAAGTGCATATTCA+TGG | 0.351370 | 5_2:-8419601 | Msa0754710:CDS |
| TTCCCTCCTTTGTGTTCCCT+TGG | 0.354377 | 5_2:+8417917 | None:intergenic |
| GGGCGAGAAATCTGAAGTTT+GGG | 0.365437 | 5_2:-8422571 | Msa0754710:CDS |
| GAGCTTGCTACGAGCAGTTC+AGG | 0.368342 | 5_2:-8422458 | Msa0754710:CDS |
| TAATTGAATCATTCACTAAA+GGG | 0.369778 | 5_2:-8422418 | Msa0754710:CDS |
| ATAATAGCTATGGGATTTCC+TGG | 0.369907 | 5_2:-8421511 | Msa0754710:CDS |
| ATTACAATTTCTGATCATAA+TGG | 0.385783 | 5_2:-8419007 | Msa0754710:intron |
| GATTCCATGTTGGTGGTGTT+AGG | 0.387770 | 5_2:+8417717 | None:intergenic |
| AATGATGCTATAAGTTGAAT+AGG | 0.387784 | 5_2:+8419623 | None:intergenic |
| ACCATTAGATCCTTTGTCTT+GGG | 0.391614 | 5_2:+8418885 | None:intergenic |
| GCATTTGAGTGACTCATTGA+TGG | 0.391855 | 5_2:-8422705 | Msa0754710:exon |
| GCATTGATCCAGAAATCTTC+TGG | 0.391902 | 5_2:+8418781 | None:intergenic |
| TGTCAGATCCTTTGCTTGCA+GGG | 0.405115 | 5_2:+8418045 | None:intergenic |
| TTCAATTATATTAGGTTGCT+CGG | 0.413613 | 5_2:+8422433 | None:intergenic |
| GGCAATTATGATCACTAAAT+GGG | 0.416144 | 5_2:+8419648 | None:intergenic |
| GATCCCAGCTCCAGGGTTCC+AGG | 0.417514 | 5_2:-8418117 | Msa0754710:CDS |
| ACCACCAACATGGAATCTAT+AGG | 0.422090 | 5_2:-8417711 | Msa0754710:CDS |
| AGTTTCATCTTACCTTCGTC+CGG | 0.428921 | 5_2:+8419139 | None:intergenic |
| AGAAACAATATGCCGTGCTT+TGG | 0.429053 | 5_2:+8422355 | None:intergenic |
| TCCCAAGACAAAGGATCTAA+TGG | 0.429717 | 5_2:-8418886 | Msa0754710:intron |
| GGTGTATGCTGAGAGGGTTT+CGG | 0.429957 | 5_2:-8419063 | Msa0754710:CDS |
| CCACCAACATGGAATCTATA+GGG | 0.430392 | 5_2:-8417710 | Msa0754710:CDS |
| ATAATTGAATCATTCACTAA+AGG | 0.434744 | 5_2:-8422419 | Msa0754710:CDS |
| TGTTCATTGTAAAGCTGGTA+TGG | 0.435047 | 5_2:-8419549 | Msa0754710:CDS |
| CAGGAAGATATACTAGAAAC+TGG | 0.438818 | 5_2:+8422593 | None:intergenic |
| CTCTTACTTGAATTAGATGT+TGG | 0.439796 | 5_2:+8417996 | None:intergenic |
| GACTATGATGGCACCCTACC+TGG | 0.440326 | 5_2:-8418077 | Msa0754710:CDS |
| TTTCTGGTTAAAGGAATCAA+TGG | 0.442200 | 5_2:+8419347 | None:intergenic |
| GACATAAATAATGTCTCATC+TGG | 0.447201 | 5_2:-8418026 | Msa0754710:CDS |
| AACCAGAAAAGATGTGTAGA+TGG | 0.447224 | 5_2:-8419333 | Msa0754710:CDS |
| TCTGTCAGACCTGGCTCCCC+TGG | 0.450444 | 5_2:+8418727 | None:intergenic |
| CGTGAGATTTGTAGAGATTG+AGG | 0.455107 | 5_2:+8423689 | None:intergenic |
| CAGAGAAAGATCCCAGCTCC+AGG | 0.457657 | 5_2:-8418125 | Msa0754710:CDS |
| TCGACCTGGAACCCTGGAGC+TGG | 0.458519 | 5_2:+8418113 | None:intergenic |
| CTCTTCAAAGGAAGCAGTAA+AGG | 0.459094 | 5_2:-8422387 | Msa0754710:CDS |
| TACCATTAGATCCTTTGTCT+TGG | 0.463104 | 5_2:+8418884 | None:intergenic |
| GGGTATGATCCCGGTGTAAA+GGG | 0.466221 | 5_2:+8417555 | None:intergenic |
| GGAGCCAGGTCTGACAGAAT+TGG | 0.466471 | 5_2:-8418722 | Msa0754710:CDS |
| CCCTATAGATTCCATGTTGG+TGG | 0.466488 | 5_2:+8417710 | None:intergenic |
| TATAGGGACAAGTGAATTCA+AGG | 0.468706 | 5_2:-8417694 | Msa0754710:CDS |
| TGGGTATGATCCCGGTGTAA+AGG | 0.470067 | 5_2:+8417554 | None:intergenic |
| ATCAATGGCTTCCTCAGCAG+TGG | 0.477990 | 5_2:+8419362 | None:intergenic |
| TTTACCTGTGGGTATGATCC+CGG | 0.478369 | 5_2:+8417546 | None:intergenic |
| ACAACTTCGACCTGGAACCC+TGG | 0.483885 | 5_2:+8418107 | None:intergenic |
| GCTCGTAGCAAGCTCATTTG+AGG | 0.487048 | 5_2:+8422466 | None:intergenic |
| GTCTTCGAAGATGGAGGAGC+GGG | 0.487404 | 5_2:+8422680 | None:intergenic |
| ATAATAAAATGCAGGAAAGA+AGG | 0.488077 | 5_2:+8417467 | None:intergenic |
| GCTCGTCTTACAAGTGGGAT+TGG | 0.491539 | 5_2:-8422500 | Msa0754710:CDS |
| TTTGCATTACCAGGGGAGCC+AGG | 0.493421 | 5_2:-8418736 | Msa0754710:CDS |
| ATCATTCACTAAAGGGTTGG+TGG | 0.498981 | 5_2:-8422411 | Msa0754710:CDS |
| TGGATCAATGCATCAAAGAA+AGG | 0.505856 | 5_2:-8418769 | Msa0754710:CDS |
| AAATTACTAACAATTTGACT+TGG | 0.506905 | 5_2:+8419294 | None:intergenic |
| TAAAGTTCAGTCTTCGAAGA+TGG | 0.509153 | 5_2:+8422671 | None:intergenic |
| ATCGACAGGGAGATTTCTAC+TGG | 0.511246 | 5_2:-8418672 | Msa0754710:intron |
| TACCCACAGGTAAAAGGATC+AGG | 0.511997 | 5_2:-8417537 | Msa0754710:three_prime_UTR |
| AGAAATCTGAAGTTTGGGGC+TGG | 0.513911 | 5_2:-8422566 | Msa0754710:CDS |
| ATTGAGGTTCGGATCAATGT+AGG | 0.514120 | 5_2:+8423705 | None:intergenic |
| GTCGTTGTTCATTGTAAAGC+TGG | 0.516023 | 5_2:-8419554 | Msa0754710:CDS |
| CTCGTAGCAAGCTCATTTGA+GGG | 0.518109 | 5_2:+8422467 | None:intergenic |
| AAGTGCATATTCATGGTTGA+AGG | 0.518532 | 5_2:-8419594 | Msa0754710:CDS |
| GATTTGTAGAGATTGAGGTT+CGG | 0.520285 | 5_2:+8423694 | None:intergenic |
| AATTACTAACAATTTGACTT+GGG | 0.526266 | 5_2:+8419295 | None:intergenic |
| TGATTATAGTGTAGAGTCAC+CGG | 0.541232 | 5_2:+8423734 | None:intergenic |
| TGGATGGTCTAACCCAATAA+GGG | 0.541504 | 5_2:+8419029 | None:intergenic |
| TGTGTATAGCCCTTTACACC+GGG | 0.541866 | 5_2:-8417564 | Msa0754710:three_prime_UTR |
| GCATTTGCTCGTCTTACAAG+TGG | 0.541935 | 5_2:-8422506 | Msa0754710:CDS |
| TGAATCATTCACTAAAGGGT+TGG | 0.542994 | 5_2:-8422414 | Msa0754710:CDS |
| ATTATGATCAGAAATTGTAA+TGG | 0.543592 | 5_2:+8419009 | None:intergenic |
| AAACTTCATAATATTCATGC+AGG | 0.544352 | 5_2:-8417741 | Msa0754710:CDS |
| AGTTTCTAGTATATCTTCCT+GGG | 0.544911 | 5_2:-8422591 | Msa0754710:CDS |
| TCAAAATAAACGCAGATACC+AGG | 0.545779 | 5_2:-8422333 | Msa0754710:intron |
| TAGCTCAATGGATAAAGTGA+TGG | 0.548350 | 5_2:-8423827 | Msa0754710:five_prime_UTR |
| AAAGCTGGTATGGGAAGGAC+AGG | 0.551221 | 5_2:-8419539 | Msa0754710:CDS |
| TCCACAGGTGTATGCTGAGA+GGG | 0.552284 | 5_2:-8419069 | Msa0754710:intron |
| GAAAAGATGTGTAGATGGAA+AGG | 0.552661 | 5_2:-8419328 | Msa0754710:CDS |
| GTTCATTGTAAAGCTGGTAT+GGG | 0.554917 | 5_2:-8419548 | Msa0754710:CDS |
| TGATCAGAAATTGTAATGGA+TGG | 0.555457 | 5_2:+8419013 | None:intergenic |
| GACCAAGGGAACACAAAGGA+GGG | 0.557131 | 5_2:-8417919 | Msa0754710:CDS |
| AAATTTAAATAATAAAATGC+AGG | 0.558126 | 5_2:+8417459 | None:intergenic |
| AGGCCACTACTGACCATGTA+GGG | 0.559645 | 5_2:-8417851 | Msa0754710:CDS |
| AGGGTTGGTGGACTCTTCAA+AGG | 0.561799 | 5_2:-8422399 | Msa0754710:CDS |
| GAGCGATGAAGAGGAGACCA+AGG | 0.562238 | 5_2:-8417934 | Msa0754710:CDS |
| TTACCTTAAGATACAAAAGA+AGG | 0.562827 | 5_2:+8419501 | None:intergenic |
| AATAATAGTTACACCGTCAC+CGG | 0.563496 | 5_2:-8423611 | Msa0754710:five_prime_UTR |
| GATGCTATAAGTTGAATAGG+AGG | 0.564724 | 5_2:+8419626 | None:intergenic |
| TCAATGGCTTCCTCAGCAGT+GGG | 0.569100 | 5_2:+8419363 | None:intergenic |
| AATAAAACTATACCTTCCCC+TGG | 0.569386 | 5_2:+8420703 | None:intergenic |
| GTTTCATCTTACCTTCGTCC+GGG | 0.569711 | 5_2:+8419140 | None:intergenic |
| GGCGAGTAGTTAGCCGGTGA+CGG | 0.570821 | 5_2:+8423598 | None:intergenic |
| ATTCTCAGAGAGCGATGAAG+AGG | 0.571302 | 5_2:-8417943 | Msa0754710:CDS |
| AGGGATGTTGTCGCGCGCAA+CGG | 0.573248 | 5_2:-8417832 | Msa0754710:CDS |
| GGCTAACTACTCGCCGTCGC+CGG | 0.574231 | 5_2:-8423590 | Msa0754710:intron |
| GGACGGAGAGGAACATCATA+CGG | 0.575253 | 5_2:+8417420 | None:intergenic |
| CATTTGCTCGTCTTACAAGT+GGG | 0.577667 | 5_2:-8422505 | Msa0754710:CDS |
| TTGTGTATAGCCCTTTACAC+CGG | 0.577897 | 5_2:-8417565 | Msa0754710:three_prime_UTR |
| AAACTTCAGATTTCTCGCCC+AGG | 0.578026 | 5_2:+8422574 | None:intergenic |
| CGCGCGACAACATCCCTACA+TGG | 0.578706 | 5_2:+8417838 | None:intergenic |
| AAAGTCAACCCTGCAAGCAA+AGG | 0.578759 | 5_2:-8418053 | Msa0754710:CDS |
| CTACCATCACAACTTCGACC+TGG | 0.580131 | 5_2:+8418099 | None:intergenic |
| AACTCTTTGTAACAGGAAGG+TGG | 0.581611 | 5_2:-8421568 | Msa0754710:intron |
| AGACCAAGGGAACACAAAGG+AGG | 0.583368 | 5_2:-8417920 | Msa0754710:CDS |
| AGTGGATCGCTTACCGGCGA+CGG | 0.588917 | 5_2:+8423577 | None:intergenic |
| CCAACCAATTCTGTCAGACC+TGG | 0.594002 | 5_2:+8418718 | None:intergenic |
| CGGACTTTAACACACTTCAA+CGG | 0.596252 | 5_2:-8419173 | Msa0754710:CDS |
| TATACAATCTTTGTTCAGAG+AGG | 0.602650 | 5_2:-8420746 | Msa0754710:CDS |
| TGTTAGAATGTCCTCAAGGA+CGG | 0.603428 | 5_2:+8417403 | None:intergenic |
| GCAAACACTCTGTTCCGTGC+CGG | 0.603887 | 5_2:-8423753 | Msa0754710:five_prime_UTR |
| GACTGAGAACAGTGGCATGT+CGG | 0.608063 | 5_2:-8422528 | Msa0754710:CDS |
| CTAGAAACTGGTGACAAGGA+TGG | 0.613708 | 5_2:+8422605 | None:intergenic |
| GTTCCAGGTCGAAGTTGTGA+TGG | 0.614063 | 5_2:-8418102 | Msa0754710:CDS |
| TGTCCCTATAGATTCCATGT+TGG | 0.614065 | 5_2:+8417707 | None:intergenic |
| CATCCCTACATGGTCAGTAG+TGG | 0.615666 | 5_2:+8417848 | None:intergenic |
| GACAAGTCCAGCCCGGACGA+AGG | 0.618832 | 5_2:-8419151 | Msa0754710:intron |
| GAGGCCACTACTGACCATGT+AGG | 0.621926 | 5_2:-8417852 | Msa0754710:CDS |
| ATGCTATAAGTTGAATAGGA+GGG | 0.622454 | 5_2:+8419627 | None:intergenic |
| TGCATATTCATGGTTGAAGG+AGG | 0.622487 | 5_2:-8419591 | Msa0754710:CDS |
| TTTAGTCTTTGCATTACCAG+GGG | 0.622542 | 5_2:-8418743 | Msa0754710:CDS |
| CCAGAGCTAAAATCACCACC+AGG | 0.625547 | 5_2:+8421493 | None:intergenic |
| GGAACCTCATCAAGCATCTG+AGG | 0.628106 | 5_2:-8417871 | Msa0754710:CDS |
| TAGAAAGCATCCCAAGACAA+AGG | 0.629907 | 5_2:-8418895 | Msa0754710:CDS |
| CCAGGTCTGACAGAATTGGT+TGG | 0.630334 | 5_2:-8418718 | Msa0754710:CDS |
| ATTGTAAAGCTGGTATGGGA+AGG | 0.630358 | 5_2:-8419544 | Msa0754710:CDS |
| AGTTCAGTCTTCGAAGATGG+AGG | 0.632879 | 5_2:+8422674 | None:intergenic |
| GATGTTCCTCTCCGTCCTTG+AGG | 0.635719 | 5_2:-8417414 | Msa0754710:three_prime_UTR |
| AGAGAAAGATCCCAGCTCCA+GGG | 0.638717 | 5_2:-8418124 | Msa0754710:CDS |
| CCCTCCGAAAGAAAACAGAT+CGG | 0.640033 | 5_2:-8423635 | Msa0754710:five_prime_UTR |
| AGCGATGAAGAGGAGACCAA+GGG | 0.640892 | 5_2:-8417933 | Msa0754710:CDS |
| GGCGAGAAATCTGAAGTTTG+GGG | 0.643756 | 5_2:-8422570 | Msa0754710:CDS |
| TATACTAGAAACTGGTGACA+AGG | 0.644336 | 5_2:+8422601 | None:intergenic |
| AGGCAGTGCAGACCAAAGCA+CGG | 0.648450 | 5_2:-8422367 | Msa0754710:CDS |
| CCAGCAGCATGACGAACGCA+CGG | 0.649232 | 5_2:-8417796 | Msa0754710:CDS |
| GGGGTTCTATCGAAATCACA+TGG | 0.653811 | 5_2:-8421368 | Msa0754710:CDS |
| TTCCACAGGTGTATGCTGAG+AGG | 0.654856 | 5_2:-8419070 | Msa0754710:intron |
| AGGAGACCAAGGGAACACAA+AGG | 0.655502 | 5_2:-8417923 | Msa0754710:CDS |
| TGTTCAGAGAGGTTGTACGA+TGG | 0.656307 | 5_2:-8420735 | Msa0754710:CDS |
| AGTCTTCGAAGATGGAGGAG+CGG | 0.657238 | 5_2:+8422679 | None:intergenic |
| GAAGGAGGATATCCAAAATG+TGG | 0.657507 | 5_2:-8419576 | Msa0754710:CDS |
| GGCGACGGCGAGTAGTTAGC+CGG | 0.657965 | 5_2:+8423592 | None:intergenic |
| AGGTCCTAACACCACCAACA+TGG | 0.659756 | 5_2:-8417721 | Msa0754710:CDS |
| GTGGCCTCAGATGCTTGATG+AGG | 0.665913 | 5_2:+8417867 | None:intergenic |
| TACACCGGGATCATACCCAC+AGG | 0.673048 | 5_2:-8417550 | Msa0754710:three_prime_UTR |
| GTTGTGATGGTAGACTATGA+TGG | 0.676104 | 5_2:-8418089 | Msa0754710:CDS |
| AGGGTGTTAGAATGTCCTCA+AGG | 0.680168 | 5_2:+8417399 | None:intergenic |
| GAATGTCCTCAAGGACGGAG+AGG | 0.694257 | 5_2:+8417408 | None:intergenic |
| ATAGTGTAGAGTCACCGGCA+CGG | 0.709967 | 5_2:+8423739 | None:intergenic |
| CAATGGCTTCCTCAGCAGTG+GGG | 0.728366 | 5_2:+8419364 | None:intergenic |
| ATAGCTATGGGATTTCCTGG+TGG | 0.733310 | 5_2:-8421508 | Msa0754710:CDS |
| AACTCACAGACTGAGAACAG+TGG | 0.745872 | 5_2:-8422536 | Msa0754710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAAATGTTCA+TGG | + | chr5_2:8419010-8419029 | None:intergenic | 10.0% |
| !!! | ATTTTTTATTTAAAAATGTC+TGG | - | chr5_2:8419023-8419042 | Msa0754710:CDS | 10.0% |
| !! | TTAGTAAAATATAAATGATA+CGG | - | chr5_2:8420185-8420204 | Msa0754710:intron | 10.0% |
| !! | TATATTATGTTTAGAAAATA+TGG | - | chr5_2:8420995-8421014 | Msa0754710:intron | 10.0% |
| !!! | AATTTTCTTTTATTTTTGTT+TGG | - | chr5_2:8421463-8421482 | Msa0754710:intron | 10.0% |
| !! | TATTTAAATAAATTCTTCAT+TGG | - | chr5_2:8422737-8422756 | Msa0754710:intron | 10.0% |
| !! | AAATTTAAATAATAAAATGC+AGG | + | chr5_2:8423796-8423815 | None:intergenic | 10.0% |
| !! | ACATATTAGTTAAATTAGTT+AGG | + | chr5_2:8418192-8418211 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTATACTATTTTG+AGG | + | chr5_2:8419337-8419356 | None:intergenic | 15.0% |
| !! | ACTAAAAATATAATAGCTAT+GGG | - | chr5_2:8419732-8419751 | Msa0754710:intron | 15.0% |
| !!! | ACAAAATTTTGAACTAATAT+GGG | + | chr5_2:8420852-8420871 | None:intergenic | 15.0% |
| !!! | AACAAAATTTTGAACTAATA+TGG | + | chr5_2:8420853-8420872 | None:intergenic | 15.0% |
| !! | ATGATAGTAAATATTAAGAA+AGG | + | chr5_2:8420886-8420905 | None:intergenic | 15.0% |
| !! | TAATATTTACTATCATATAG+TGG | - | chr5_2:8420890-8420909 | Msa0754710:intron | 15.0% |
| !! | TTTCTAAACATAATATATGA+TGG | + | chr5_2:8420992-8421011 | None:intergenic | 15.0% |
| !! | TTGAATTATACATAATATTG+AGG | - | chr5_2:8421250-8421269 | Msa0754710:intron | 15.0% |
| !!! | TTTTGTAAAAAATAAACTAG+CGG | + | chr5_2:8421523-8421542 | None:intergenic | 15.0% |
| !! | TTCATCATTATAAAAACATT+TGG | + | chr5_2:8422805-8422824 | None:intergenic | 15.0% |
| !!! | TATTTTTCAATGTTATTTTG+TGG | - | chr5_2:8423031-8423050 | Msa0754710:intron | 15.0% |
| !!! | ATTTTTCAATGTTATTTTGT+GGG | - | chr5_2:8423032-8423051 | Msa0754710:intron | 15.0% |
| !!! | CATAAACGTTCTTTTTTTTA+CGG | - | chr5_2:8418368-8418387 | Msa0754710:intron | 20.0% |
| !! | ACAACAAATTAACTCAATAA+GGG | + | chr5_2:8418476-8418495 | None:intergenic | 20.0% |
| !! | AACAACAAATTAACTCAATA+AGG | + | chr5_2:8418477-8418496 | None:intergenic | 20.0% |
| !! | TAAAATAGAAAACCAATCTA+AGG | + | chr5_2:8418520-8418539 | None:intergenic | 20.0% |
| !! | GTGAATGATTCAATTATATT+AGG | + | chr5_2:8418830-8418849 | None:intergenic | 20.0% |
| !! | ATAATTGAATCATTCACTAA+AGG | - | chr5_2:8418833-8418852 | Msa0754710:intron | 20.0% |
| !! | TAATTGAATCATTCACTAAA+GGG | - | chr5_2:8418834-8418853 | Msa0754710:intron | 20.0% |
| !! | CATCTATTAAAGAATCAAAT+TGG | - | chr5_2:8419490-8419509 | Msa0754710:intron | 20.0% |
| !! | CACTAAAAATATAATAGCTA+TGG | - | chr5_2:8419731-8419750 | Msa0754710:intron | 20.0% |
| !! | AATATAAATGATACGGAAAT+TGG | - | chr5_2:8420192-8420211 | Msa0754710:intron | 20.0% |
| !! | CTCAATTATAAATTACTGTT+TGG | + | chr5_2:8420270-8420289 | None:intergenic | 20.0% |
| !!! | GTTTTATTATATTTGCACTA+TGG | - | chr5_2:8420564-8420583 | Msa0754710:intron | 20.0% |
| !!! | TTTTTTTGAAGAACCTAAAT+TGG | + | chr5_2:8420961-8420980 | None:intergenic | 20.0% |
| !!! | TTTTTATCTGTTTTATGCTA+TGG | + | chr5_2:8421420-8421439 | None:intergenic | 20.0% |
| !! | AGCATAAAACAGATAAAAAT+TGG | - | chr5_2:8421421-8421440 | Msa0754710:intron | 20.0% |
| !!! | TTTTGAAAATAATTACTTGC+TGG | - | chr5_2:8421846-8421865 | Msa0754710:intron | 20.0% |
| !! | TTTGAAAATAATTACTTGCT+GGG | - | chr5_2:8421847-8421866 | Msa0754710:intron | 20.0% |
| !!! | AATTACTAACAATTTGACTT+GGG | + | chr5_2:8421960-8421979 | None:intergenic | 20.0% |
| !! | AAATTACTAACAATTTGACT+TGG | + | chr5_2:8421961-8421980 | None:intergenic | 20.0% |
| !!! | TTTTTTAGTTTATCGTGTTA+AGG | - | chr5_2:8421979-8421998 | Msa0754710:intron | 20.0% |
| !!! | GATATGTCAAATATTTTGAA+CGG | - | chr5_2:8422059-8422078 | Msa0754710:intron | 20.0% |
| !! | ATTATGATCAGAAATTGTAA+TGG | + | chr5_2:8422246-8422265 | None:intergenic | 20.0% |
| !! | ATTACAATTTCTGATCATAA+TGG | - | chr5_2:8422245-8422264 | Msa0754710:intron | 20.0% |
| !!! | ACATTTTATTAATCTAGAGA+AGG | - | chr5_2:8422295-8422314 | Msa0754710:intron | 20.0% |
| !! | AATGAGATATAAAAGTAAGT+TGG | + | chr5_2:8422446-8422465 | None:intergenic | 20.0% |
| !!! | TCTTCTTTATCATTTTGATA+TGG | - | chr5_2:8422776-8422795 | Msa0754710:intron | 20.0% |
| !!! | GTTCAAATTTGTTAATATTC+AGG | - | chr5_2:8423661-8423680 | Msa0754710:five_prime_UTR | 20.0% |
| !!! | GATTTGCAATATTTTGATAA+GGG | + | chr5_2:8423875-8423894 | None:intergenic | 20.0% |
| ! | GTTAAAAAAGATTAGATGAC+TGG | + | chr5_2:8417383-8417402 | None:intergenic | 25.0% |
| ! | TATCCATTGAGCTAAAAATT+AGG | + | chr5_2:8417419-8417438 | None:intergenic | 25.0% |
| !! | GTTTCTTTCATCTTCTAAAA+TGG | - | chr5_2:8417477-8417496 | Msa0754710:three_prime_UTR | 25.0% |
| ! | ATTAAACAGAGATCTGAAAA+TGG | + | chr5_2:8417792-8417811 | None:intergenic | 25.0% |
| !! | TGTTTTCATGTTTACAAACT+AGG | - | chr5_2:8417931-8417950 | Msa0754710:CDS | 25.0% |
| ! | CAAACATAGCCTAAATAAAA+AGG | + | chr5_2:8417970-8417989 | None:intergenic | 25.0% |
| !!! | CTTTTTATTTAGGCTATGTT+TGG | - | chr5_2:8417968-8417987 | Msa0754710:CDS | 25.0% |
| ! | AAAATTGTTATGAATGTGTC+TGG | + | chr5_2:8418346-8418365 | None:intergenic | 25.0% |
| !! | TTCAATTATATTAGGTTGCT+CGG | + | chr5_2:8418822-8418841 | None:intergenic | 25.0% |
| ! | AAGAAAATCATCTCATATAG+AGG | - | chr5_2:8419230-8419249 | Msa0754710:intron | 25.0% |
| ! | TGTCTAACTAAGAATGTTAA+AGG | + | chr5_2:8419408-8419427 | None:intergenic | 25.0% |
| ! | ACATTCTTAGTTAGACAAAA+AGG | - | chr5_2:8419411-8419430 | Msa0754710:intron | 25.0% |
| ! | TCTTTAATAGATGAAGTCAA+AGG | + | chr5_2:8419483-8419502 | None:intergenic | 25.0% |
| !!! | TGAGTCTATTGTATTTTGAA+TGG | - | chr5_2:8419589-8419608 | Msa0754710:CDS | 25.0% |
| ! | AGAGAAAACTGAAATCAATA+TGG | + | chr5_2:8419651-8419670 | None:intergenic | 25.0% |
| !!! | ATTTTAGCTCTGGAATTTTT+GGG | - | chr5_2:8419769-8419788 | Msa0754710:intron | 25.0% |
| !! | CATGGCATATATTTCAATTT+TGG | - | chr5_2:8419946-8419965 | Msa0754710:intron | 25.0% |
| !! | AAGTTTTCTTCTATATTCCA+AGG | + | chr5_2:8420076-8420095 | None:intergenic | 25.0% |
| !! | ATATTTCTAAGCTATACGAA+GGG | + | chr5_2:8420134-8420153 | None:intergenic | 25.0% |
| !! | GTTTCTTATGATTTGACTTT+AGG | + | chr5_2:8420162-8420181 | None:intergenic | 25.0% |
| !!! | AAGTTTTCATCTAAAGTGTA+GGG | + | chr5_2:8420315-8420334 | None:intergenic | 25.0% |
| ! | TAGACATGTAATAATCTTGA+TGG | - | chr5_2:8420607-8420626 | Msa0754710:intron | 25.0% |
| !! | AATGATGCTATAAGTTGAAT+AGG | + | chr5_2:8421632-8421651 | None:intergenic | 25.0% |
| ! | TTACCTTAAGATACAAAAGA+AGG | + | chr5_2:8421754-8421773 | None:intergenic | 25.0% |
| ! | TTTCAAAATTGCACAATTCA+CGG | + | chr5_2:8421834-8421853 | None:intergenic | 25.0% |
| ! | AAATTAAGAAAAGCCTTCTT+TGG | + | chr5_2:8422158-8422177 | None:intergenic | 25.0% |
| !! | AAAGAAGGCTTTTCTTAATT+TGG | - | chr5_2:8422157-8422176 | Msa0754710:intron | 25.0% |
| ! | TCAAATGTAGGCATAAAAAA+TGG | + | chr5_2:8422402-8422421 | None:intergenic | 25.0% |
| !!! | TTTTTTATGCCTACATTTGA+TGG | - | chr5_2:8422402-8422421 | Msa0754710:CDS | 25.0% |
| ! | GAAAAAGCTAAAGTATAAAG+TGG | + | chr5_2:8422633-8422652 | None:intergenic | 25.0% |
| !!! | ATTAGTTCTGAAAAGAAACT+TGG | - | chr5_2:8422661-8422680 | Msa0754710:CDS | 25.0% |
| ! | AAATGATAAAGAAGACAAGT+AGG | + | chr5_2:8422771-8422790 | None:intergenic | 25.0% |
| !! | GAGAACAGAAAAATTTTAGA+TGG | - | chr5_2:8422971-8422990 | Msa0754710:intron | 25.0% |
| ! | AAGAGTAAGATACCTAAAAA+TGG | - | chr5_2:8423274-8423293 | Msa0754710:intron | 25.0% |
| ! | TGCAACTGATTACAAATATA+TGG | - | chr5_2:8423360-8423379 | Msa0754710:intron | 25.0% |
| ! | AAACTTCATAATATTCATGC+AGG | - | chr5_2:8423511-8423530 | Msa0754710:intron | 25.0% |
| ! | ATAATAAAATGCAGGAAAGA+AGG | + | chr5_2:8423788-8423807 | None:intergenic | 25.0% |
| !!! | GGATTTGCAATATTTTGATA+AGG | + | chr5_2:8423876-8423895 | None:intergenic | 25.0% |
| !!! | TGTCCTAATTTTTAGCTCAA+TGG | - | chr5_2:8417413-8417432 | Msa0754710:three_prime_UTR | 30.0% |
| ! | ATTTCCGATCTGTTTTCTTT+CGG | + | chr5_2:8417624-8417643 | None:intergenic | 30.0% |
| ! | TTTTTCCGTTCTTGTATCAA+CGG | - | chr5_2:8417707-8417726 | Msa0754710:CDS | 30.0% |
| TTCATTGATACAACAGATTG+AGG | + | chr5_2:8417765-8417784 | None:intergenic | 30.0% | |
| ! | CAGCATAAGCTAATTGATTT+CGG | + | chr5_2:8417900-8417919 | None:intergenic | 30.0% |
| AAGCTATTCAAGAAAGCTTA+TGG | - | chr5_2:8418099-8418118 | Msa0754710:CDS | 30.0% | |
| ACTTGTTTGAACTTATCTAC+TGG | + | chr5_2:8418319-8418338 | None:intergenic | 30.0% | |
| TAGACTTAATCAACCTATAG+AGG | - | chr5_2:8418443-8418462 | Msa0754710:intron | 30.0% | |
| !! | AGTTTCTAGTATATCTTCCT+GGG | - | chr5_2:8418661-8418680 | Msa0754710:intron | 30.0% |
| TGACGTTGTATAAAGGATTT+AGG | - | chr5_2:8418984-8419003 | Msa0754710:intron | 30.0% | |
| !! | TCATTTTTCCAATGCATGTA+TGG | - | chr5_2:8419192-8419211 | Msa0754710:CDS | 30.0% |
| AGAACTGCAAAATTGTGTAT+AGG | - | chr5_2:8419274-8419293 | Msa0754710:intron | 30.0% | |
| !! | CAAATTGGTGTTGATTTCTT+AGG | - | chr5_2:8419505-8419524 | Msa0754710:CDS | 30.0% |
| CACATTTAACTCTTTGTAAC+AGG | - | chr5_2:8419677-8419696 | Msa0754710:intron | 30.0% | |
| TTTAACTCTTTGTAACAGGA+AGG | - | chr5_2:8419681-8419700 | Msa0754710:intron | 30.0% | |
| !!! | GATTTTAGCTCTGGAATTTT+TGG | - | chr5_2:8419768-8419787 | Msa0754710:intron | 30.0% |
| !!! | GTTTTTTGAAACTCATCACA+AGG | - | chr5_2:8419920-8419939 | Msa0754710:intron | 30.0% |
| ! | ATTTGCTAGTACTCAAGAAA+TGG | - | chr5_2:8419986-8420005 | Msa0754710:intron | 30.0% |
| TTTGCTAGTACTCAAGAAAT+GGG | - | chr5_2:8419987-8420006 | Msa0754710:intron | 30.0% | |
| AAGGTTGTAAACTTGAAGAA+AGG | + | chr5_2:8420057-8420076 | None:intergenic | 30.0% | |
| ! | TTTCTTCAAGTTTACAACCT+TGG | - | chr5_2:8420056-8420075 | Msa0754710:intron | 30.0% |
| ! | GATATTTCTAAGCTATACGA+AGG | + | chr5_2:8420135-8420154 | None:intergenic | 30.0% |
| !! | CAAGTTTTCATCTAAAGTGT+AGG | + | chr5_2:8420316-8420335 | None:intergenic | 30.0% |
| CTACACTTTAGATGAAAACT+TGG | - | chr5_2:8420314-8420333 | Msa0754710:intron | 30.0% | |
| AGATGAAAACTTGGTATGTT+AGG | - | chr5_2:8420323-8420342 | Msa0754710:intron | 30.0% | |
| TATACAATCTTTGTTCAGAG+AGG | - | chr5_2:8420506-8420525 | Msa0754710:intron | 30.0% | |
| ACATGTAATAATCTTGATGG+TGG | - | chr5_2:8420610-8420629 | Msa0754710:intron | 30.0% | |
| GATTCAAAATTACTAGAGAG+TGG | + | chr5_2:8420677-8420696 | None:intergenic | 30.0% | |
| GGACAAATTCACAAATCAAA+AGG | + | chr5_2:8420778-8420797 | None:intergenic | 30.0% | |
| ACAATCCCAAGAAATCAATA+GGG | + | chr5_2:8421567-8421586 | None:intergenic | 30.0% | |
| AACAATCCCAAGAAATCAAT+AGG | + | chr5_2:8421568-8421587 | None:intergenic | 30.0% | |
| GGCAATTATGATCACTAAAT+GGG | + | chr5_2:8421607-8421626 | None:intergenic | 30.0% | |
| ! | ATGCTATAAGTTGAATAGGA+GGG | + | chr5_2:8421628-8421647 | None:intergenic | 30.0% |
| !! | TTTCTGGTTAAAGGAATCAA+TGG | + | chr5_2:8421908-8421927 | None:intergenic | 30.0% |
| !!! | TACACATCTTTTCTGGTTAA+AGG | + | chr5_2:8421917-8421936 | None:intergenic | 30.0% |
| ! | TGATCAGAAATTGTAATGGA+TGG | + | chr5_2:8422242-8422261 | None:intergenic | 30.0% |
| !! | ATTTTAGTCTTTGCATTACC+AGG | - | chr5_2:8422507-8422526 | Msa0754710:CDS | 30.0% |
| !! | TTTTAGTCTTTGCATTACCA+GGG | - | chr5_2:8422508-8422527 | Msa0754710:CDS | 30.0% |
| ! | AATTCATTTTCATGATCGAC+AGG | - | chr5_2:8422566-8422585 | Msa0754710:CDS | 30.0% |
| ! | ATTCATTTTCATGATCGACA+GGG | - | chr5_2:8422567-8422586 | Msa0754710:CDS | 30.0% |
| !! | TTCTACTGGTTCGTTTAAAA+TGG | - | chr5_2:8422594-8422613 | Msa0754710:CDS | 30.0% |
| ! | TTTAAAATGGCTACTTCTTC+AGG | - | chr5_2:8422607-8422626 | Msa0754710:CDS | 30.0% |
| ! | GAGAATAAATCTGGAATGTA+TGG | + | chr5_2:8422847-8422866 | None:intergenic | 30.0% |
| AGCTTAGAAGAGAATAAATC+TGG | + | chr5_2:8422856-8422875 | None:intergenic | 30.0% | |
| ! | CAGAAAAATTTTAGATGGCT+CGG | - | chr5_2:8422976-8422995 | Msa0754710:intron | 30.0% |
| GAAAAAGTTCAGTGAATCAA+CGG | + | chr5_2:8423079-8423098 | None:intergenic | 30.0% | |
| GACATAAATAATGTCTCATC+TGG | - | chr5_2:8423226-8423245 | Msa0754710:intron | 30.0% | |
| CTCTTACTTGAATTAGATGT+TGG | + | chr5_2:8423259-8423278 | None:intergenic | 30.0% | |
| !! | ACATCATCATCTCCATTTTT+AGG | + | chr5_2:8423289-8423308 | None:intergenic | 30.0% |
| !!! | GATGCTTCAGTTTTTTCTTT+TGG | - | chr5_2:8423592-8423611 | Msa0754710:five_prime_UTR | 30.0% |
| GTCATTTGACAACAAAAAAG+GGG | + | chr5_2:8423766-8423785 | None:intergenic | 30.0% | |
| GGTCATTTGACAACAAAAAA+GGG | + | chr5_2:8423767-8423786 | None:intergenic | 30.0% | |
| AGGTCATTTGACAACAAAAA+AGG | + | chr5_2:8423768-8423787 | None:intergenic | 30.0% | |
| TAGCTCAATGGATAAAGTGA+TGG | - | chr5_2:8417425-8417444 | Msa0754710:three_prime_UTR | 35.0% | |
| TGATTATAGTGTAGAGTCAC+CGG | + | chr5_2:8417521-8417540 | None:intergenic | 35.0% | |
| GATTTGTAGAGATTGAGGTT+CGG | + | chr5_2:8417561-8417580 | None:intergenic | 35.0% | |
| !!! | GGGAATAACGGTTTTTTGAA+CGG | + | chr5_2:8417600-8417619 | None:intergenic | 35.0% |
| ! | TTTTCTTTCGGAGGGAATAA+CGG | + | chr5_2:8417612-8417631 | None:intergenic | 35.0% |
| AATAATAGTTACACCGTCAC+CGG | - | chr5_2:8417641-8417660 | Msa0754710:CDS | 35.0% | |
| GTAAACATGAAAACACCTAC+AGG | + | chr5_2:8417926-8417945 | None:intergenic | 35.0% | |
| !! | TTCATCGCGCCTTTTTATTT+AGG | - | chr5_2:8417958-8417977 | Msa0754710:CDS | 35.0% |
| !! | TAAGGGTTTTATGCCTCTAT+AGG | + | chr5_2:8418459-8418478 | None:intergenic | 35.0% |
| TAAAGTTCAGTCTTCGAAGA+TGG | + | chr5_2:8418584-8418603 | None:intergenic | 35.0% | |
| TATACTAGAAACTGGTGACA+AGG | + | chr5_2:8418654-8418673 | None:intergenic | 35.0% | |
| CAGGAAGATATACTAGAAAC+TGG | + | chr5_2:8418662-8418681 | None:intergenic | 35.0% | |
| !! | CAGTTTCTAGTATATCTTCC+TGG | - | chr5_2:8418660-8418679 | Msa0754710:intron | 35.0% |
| TGAATCATTCACTAAAGGGT+TGG | - | chr5_2:8418838-8418857 | Msa0754710:intron | 35.0% | |
| TCAAAATAAACGCAGATACC+AGG | - | chr5_2:8418919-8418938 | Msa0754710:intron | 35.0% | |
| GTGTAAATTGTTAACTGACC+TGG | + | chr5_2:8418940-8418959 | None:intergenic | 35.0% | |
| TTATACAACGTCAGTAACAC+AGG | + | chr5_2:8418977-8418996 | None:intergenic | 35.0% | |
| ! | GTGTTACTGACGTTGTATAA+AGG | - | chr5_2:8418977-8418996 | Msa0754710:intron | 35.0% |
| ! | GTGTTGTTGAGGAACATTTA+TGG | + | chr5_2:8419055-8419074 | None:intergenic | 35.0% |
| ! | ACACAAAGTACCAAAACTTC+AGG | - | chr5_2:8419164-8419183 | Msa0754710:CDS | 35.0% |
| TTTCATAGCCATACATGCAT+TGG | + | chr5_2:8419203-8419222 | None:intergenic | 35.0% | |
| !! | TTGCAGTTCTAGTTTGTAAC+AGG | + | chr5_2:8419264-8419283 | None:intergenic | 35.0% |
| AAACATCTGCTTAGAATCCT+AGG | - | chr5_2:8419351-8419370 | Msa0754710:CDS | 35.0% | |
| CATATCAATTCTTCTGTAGG+AGG | + | chr5_2:8419384-8419403 | None:intergenic | 35.0% | |
| GGACATATCAATTCTTCTGT+AGG | + | chr5_2:8419387-8419406 | None:intergenic | 35.0% | |
| ! | TGATGATGCCTTTAACATGA+CGG | + | chr5_2:8419446-8419465 | None:intergenic | 35.0% |
| ATAATAGCTATGGGATTTCC+TGG | - | chr5_2:8419741-8419760 | Msa0754710:intron | 35.0% | |
| !!! | TGGAATTTTTGGGTACATTG+AGG | - | chr5_2:8419779-8419798 | Msa0754710:intron | 35.0% |
| ATGACTGAATCTGGTTATGA+GGG | + | chr5_2:8419830-8419849 | None:intergenic | 35.0% | |
| ! | AATTGACTCATGACTGAATC+TGG | + | chr5_2:8419839-8419858 | None:intergenic | 35.0% |
| AAACTCATCACAAGGTAACA+TGG | - | chr5_2:8419928-8419947 | Msa0754710:intron | 35.0% | |
| TTTAGTCTCTTGAAACCTGT+AGG | - | chr5_2:8420471-8420490 | Msa0754710:intron | 35.0% | |
| TTAGTCTCTTGAAACCTGTA+GGG | - | chr5_2:8420472-8420491 | Msa0754710:intron | 35.0% | |
| ATACTTTGTACTTTCCCTAC+AGG | + | chr5_2:8420489-8420508 | None:intergenic | 35.0% | |
| AATAAAACTATACCTTCCCC+TGG | + | chr5_2:8420552-8420571 | None:intergenic | 35.0% | |
| ATTTGCACTATGGCACTAAT+TGG | - | chr5_2:8420574-8420593 | Msa0754710:intron | 35.0% | |
| TGAACATTTCATGCACTTCT+TGG | - | chr5_2:8420726-8420745 | Msa0754710:CDS | 35.0% | |
| !! | ATCATATAGTGGTGTTGACT+TGG | - | chr5_2:8420901-8420920 | Msa0754710:intron | 35.0% |
| !! | TCATATAGTGGTGTTGACTT+GGG | - | chr5_2:8420902-8420921 | Msa0754710:intron | 35.0% |
| TATCAATAGTGAGTGTACAC+TGG | + | chr5_2:8421297-8421316 | None:intergenic | 35.0% | |
| GATTTCTTGGGATTGTTTAC+AGG | - | chr5_2:8421571-8421590 | Msa0754710:intron | 35.0% | |
| GGGCAATTATGATCACTAAA+TGG | + | chr5_2:8421608-8421627 | None:intergenic | 35.0% | |
| ! | GATGCTATAAGTTGAATAGG+AGG | + | chr5_2:8421629-8421648 | None:intergenic | 35.0% |
| TTTGTCGAAGTGCATATTCA+TGG | - | chr5_2:8421651-8421670 | Msa0754710:intron | 35.0% | |
| AAGTGCATATTCATGGTTGA+AGG | - | chr5_2:8421658-8421677 | Msa0754710:intron | 35.0% | |
| ! | AATGAACAACGACCACATTT+TGG | + | chr5_2:8421691-8421710 | None:intergenic | 35.0% |
| TGTTCATTGTAAAGCTGGTA+TGG | - | chr5_2:8421703-8421722 | Msa0754710:intron | 35.0% | |
| GTTCATTGTAAAGCTGGTAT+GGG | - | chr5_2:8421704-8421723 | Msa0754710:intron | 35.0% | |
| ! | CAGCCTTCTTTTGTATCTTA+AGG | - | chr5_2:8421748-8421767 | Msa0754710:intron | 35.0% |
| AACCAGAAAAGATGTGTAGA+TGG | - | chr5_2:8421919-8421938 | Msa0754710:intron | 35.0% | |
| ! | TTCCATCTACACATCTTTTC+TGG | + | chr5_2:8421924-8421943 | None:intergenic | 35.0% |
| GAAAAGATGTGTAGATGGAA+AGG | - | chr5_2:8421924-8421943 | Msa0754710:intron | 35.0% | |
| CAATGTACCAAATCCAAAGA+AGG | - | chr5_2:8422142-8422161 | Msa0754710:intron | 35.0% | |
| AGAAAAGCCTTCTTTGGATT+TGG | + | chr5_2:8422152-8422171 | None:intergenic | 35.0% | |
| ! | TTCTTAATTTGGACTTCCAC+AGG | - | chr5_2:8422168-8422187 | Msa0754710:intron | 35.0% |
| TGATGTCTTCACTTATTCTC+AGG | - | chr5_2:8422319-8422338 | Msa0754710:intron | 35.0% | |
| ACCATTAGATCCTTTGTCTT+GGG | + | chr5_2:8422370-8422389 | None:intergenic | 35.0% | |
| TACCATTAGATCCTTTGTCT+TGG | + | chr5_2:8422371-8422390 | None:intergenic | 35.0% | |
| ! | ATTTTCAGCCAGAAGATTTC+TGG | - | chr5_2:8422463-8422482 | Msa0754710:CDS | 35.0% |
| TGGATCAATGCATCAAAGAA+AGG | - | chr5_2:8422483-8422502 | Msa0754710:CDS | 35.0% | |
| ! | TTTAGTCTTTGCATTACCAG+GGG | - | chr5_2:8422509-8422528 | Msa0754710:CDS | 35.0% |
| CTTCTAAGCTGTGTAATGTA+TGG | - | chr5_2:8422866-8422885 | Msa0754710:intron | 35.0% | |
| TTAATACGTCAGTTTCTCCT+TGG | - | chr5_2:8422923-8422942 | Msa0754710:intron | 35.0% | |
| !! | GGATCTTGATGATTTTGACA+AGG | - | chr5_2:8422997-8423016 | Msa0754710:intron | 35.0% |
| TATAGGGACAAGTGAATTCA+AGG | - | chr5_2:8423558-8423577 | Msa0754710:intron | 35.0% | |
| !! | AGATTTTGAGAGTGATTGAG+AGG | - | chr5_2:8423621-8423640 | Msa0754710:five_prime_UTR | 35.0% |
| TAAAAGGATCAGGCACATTA+TGG | - | chr5_2:8423725-8423744 | Msa0754710:five_prime_UTR | 35.0% | |
| ATTGAGGTTCGGATCAATGT+AGG | + | chr5_2:8417550-8417569 | None:intergenic | 40.0% | |
| CGTGAGATTTGTAGAGATTG+AGG | + | chr5_2:8417566-8417585 | None:intergenic | 40.0% | |
| ACGGAAAAACGAAAGAGAAG+TGG | + | chr5_2:8417696-8417715 | None:intergenic | 40.0% | |
| AAACCGTTTGAGAGAGCTTA+CGG | + | chr5_2:8418282-8418301 | None:intergenic | 40.0% | |
| AAACTGCAAGTGCCTTAGAT+TGG | - | chr5_2:8418505-8418524 | Msa0754710:intron | 40.0% | |
| GCATTTGAGTGACTCATTGA+TGG | - | chr5_2:8418547-8418566 | Msa0754710:intron | 40.0% | |
| ! | ATTTTCAGCAGGTACTTTGG+CGG | + | chr5_2:8418609-8418628 | None:intergenic | 40.0% |
| !! | GTCATTTTCAGCAGGTACTT+TGG | + | chr5_2:8418612-8418631 | None:intergenic | 40.0% |
| CATTTGCTCGTCTTACAAGT+GGG | - | chr5_2:8418747-8418766 | Msa0754710:CDS | 40.0% | |
| ATCATTCACTAAAGGGTTGG+TGG | - | chr5_2:8418841-8418860 | Msa0754710:intron | 40.0% | |
| CTCTTCAAAGGAAGCAGTAA+AGG | - | chr5_2:8418865-8418884 | Msa0754710:intron | 40.0% | |
| AGAAACAATATGCCGTGCTT+TGG | + | chr5_2:8418900-8418919 | None:intergenic | 40.0% | |
| AACACAGGCAAAATTGAAGC+AGG | + | chr5_2:8418962-8418981 | None:intergenic | 40.0% | |
| ! | TTTACAAGAGCGTGTTGTTG+AGG | + | chr5_2:8419066-8419085 | None:intergenic | 40.0% |
| ! | AATGAGTGTGCCTGAAGTTT+TGG | + | chr5_2:8419177-8419196 | None:intergenic | 40.0% |
| CTGTAGGAGGTAATAAACCT+AGG | + | chr5_2:8419371-8419390 | None:intergenic | 40.0% | |
| ATGATGCCTTTAACATGACG+GGG | + | chr5_2:8419444-8419463 | None:intergenic | 40.0% | |
| GATGATGCCTTTAACATGAC+GGG | + | chr5_2:8419445-8419464 | None:intergenic | 40.0% | |
| AACTCTTTGTAACAGGAAGG+TGG | - | chr5_2:8419684-8419703 | Msa0754710:intron | 40.0% | |
| ! | ACAGGAAGGTGGATTTGATT+TGG | - | chr5_2:8419695-8419714 | Msa0754710:intron | 40.0% |
| TGACTGAATCTGGTTATGAG+GGG | + | chr5_2:8419829-8419848 | None:intergenic | 40.0% | |
| CATGACTGAATCTGGTTATG+AGG | + | chr5_2:8419831-8419850 | None:intergenic | 40.0% | |
| TTAAGAGAGAACTGTGTTGC+AGG | - | chr5_2:8419863-8419882 | Msa0754710:intron | 40.0% | |
| TAAGAGAGAACTGTGTTGCA+GGG | - | chr5_2:8419864-8419883 | Msa0754710:intron | 40.0% | |
| AGCTATACGAAGGGATATAC+TGG | + | chr5_2:8420125-8420144 | None:intergenic | 40.0% | |
| !! | TACGATGGATCACTTTTCCA+GGG | - | chr5_2:8420532-8420551 | Msa0754710:intron | 40.0% |
| TTAGACTATGTTCCAGTTGG+AGG | + | chr5_2:8420647-8420666 | None:intergenic | 40.0% | |
| TGGTTAGACTATGTTCCAGT+TGG | + | chr5_2:8420650-8420669 | None:intergenic | 40.0% | |
| AATTACTAGAGAGTGGCAGA+TGG | + | chr5_2:8420670-8420689 | None:intergenic | 40.0% | |
| GCATCACAACTCAAAACTGA+TGG | + | chr5_2:8420799-8420818 | None:intergenic | 40.0% | |
| CTAAGAGTCTGTGAAACTAG+AGG | + | chr5_2:8421078-8421097 | None:intergenic | 40.0% | |
| ! | CTCTAGTTTCACAGACTCTT+AGG | - | chr5_2:8421076-8421095 | Msa0754710:intron | 40.0% |
| !! | GTCTGCCCTATTGATTTCTT+GGG | - | chr5_2:8421559-8421578 | Msa0754710:intron | 40.0% |
| TGCATATTCATGGTTGAAGG+AGG | - | chr5_2:8421661-8421680 | Msa0754710:intron | 40.0% | |
| GAAGGAGGATATCCAAAATG+TGG | - | chr5_2:8421676-8421695 | Msa0754710:intron | 40.0% | |
| GTCGTTGTTCATTGTAAAGC+TGG | - | chr5_2:8421698-8421717 | Msa0754710:intron | 40.0% | |
| ATTGTAAAGCTGGTATGGGA+AGG | - | chr5_2:8421708-8421727 | Msa0754710:intron | 40.0% | |
| CGGACTTTAACACACTTCAA+CGG | - | chr5_2:8422079-8422098 | Msa0754710:intron | 40.0% | |
| AGTTTCATCTTACCTTCGTC+CGG | + | chr5_2:8422116-8422135 | None:intergenic | 40.0% | |
| GCTTCACAAATGCCCTTATT+GGG | - | chr5_2:8422211-8422230 | Msa0754710:intron | 40.0% | |
| TGGATGGTCTAACCCAATAA+GGG | + | chr5_2:8422226-8422245 | None:intergenic | 40.0% | |
| ATGGATGGTCTAACCCAATA+AGG | + | chr5_2:8422227-8422246 | None:intergenic | 40.0% | |
| !! | TAGAAAGCATCCCAAGACAA+AGG | - | chr5_2:8422357-8422376 | Msa0754710:CDS | 40.0% |
| TCCCAAGACAAAGGATCTAA+TGG | - | chr5_2:8422366-8422385 | Msa0754710:CDS | 40.0% | |
| ATGCGTGTACCATCAAATGT+AGG | + | chr5_2:8422414-8422433 | None:intergenic | 40.0% | |
| ! | GCATTGATCCAGAAATCTTC+TGG | + | chr5_2:8422474-8422493 | None:intergenic | 40.0% |
| GTTGTGATGGTAGACTATGA+TGG | - | chr5_2:8423163-8423182 | Msa0754710:intron | 40.0% | |
| ACCACCAACATGGAATCTAT+AGG | - | chr5_2:8423541-8423560 | Msa0754710:intron | 40.0% | |
| CCACCAACATGGAATCTATA+GGG | - | chr5_2:8423542-8423561 | Msa0754710:intron | 40.0% | |
| TGTCCCTATAGATTCCATGT+TGG | + | chr5_2:8423548-8423567 | None:intergenic | 40.0% | |
| !! | TTTTGAGAGTGATTGAGAGG+AGG | - | chr5_2:8423624-8423643 | Msa0754710:five_prime_UTR | 40.0% |
| TTGTGTATAGCCCTTTACAC+CGG | - | chr5_2:8423687-8423706 | Msa0754710:five_prime_UTR | 40.0% | |
| TGTTAGAATGTCCTCAAGGA+CGG | + | chr5_2:8423852-8423871 | None:intergenic | 40.0% | |
| ! | CCGATCTGTTTTCTTTCGGA+GGG | + | chr5_2:8417620-8417639 | None:intergenic | 45.0% |
| CCCTCCGAAAGAAAACAGAT+CGG | - | chr5_2:8417617-8417636 | Msa0754710:exon | 45.0% | |
| ! | TCCGATCTGTTTTCTTTCGG+AGG | + | chr5_2:8417621-8417640 | None:intergenic | 45.0% |
| AAGAGAAGTGGATCGCTTAC+CGG | + | chr5_2:8417684-8417703 | None:intergenic | 45.0% | |
| TCGCACCGTTGATACAAGAA+CGG | + | chr5_2:8417715-8417734 | None:intergenic | 45.0% | |
| CAGCGCAAAAACATCAGCAT+TGG | + | chr5_2:8417817-8417836 | None:intergenic | 45.0% | |
| TAGCTTATGCTGTAGCCTGT+AGG | - | chr5_2:8417908-8417927 | Msa0754710:CDS | 45.0% | |
| TGACCGTAAGCTCTCTCAAA+CGG | - | chr5_2:8418276-8418295 | Msa0754710:CDS | 45.0% | |
| AGTTCAGTCTTCGAAGATGG+AGG | + | chr5_2:8418581-8418600 | None:intergenic | 45.0% | |
| !!! | CGTGCATTGTCATTTTCAGC+AGG | + | chr5_2:8418620-8418639 | None:intergenic | 45.0% |
| CTAGAAACTGGTGACAAGGA+TGG | + | chr5_2:8418650-8418669 | None:intergenic | 45.0% | |
| AAACTTCAGATTTCTCGCCC+AGG | + | chr5_2:8418681-8418700 | None:intergenic | 45.0% | |
| ! | TGGGCGAGAAATCTGAAGTT+TGG | - | chr5_2:8418680-8418699 | Msa0754710:CDS | 45.0% |
| ! | GGGCGAGAAATCTGAAGTTT+GGG | - | chr5_2:8418681-8418700 | Msa0754710:CDS | 45.0% |
| ! | GGCGAGAAATCTGAAGTTTG+GGG | - | chr5_2:8418682-8418701 | Msa0754710:CDS | 45.0% |
| ! | AGAAATCTGAAGTTTGGGGC+TGG | - | chr5_2:8418686-8418705 | Msa0754710:CDS | 45.0% |
| AACTCACAGACTGAGAACAG+TGG | - | chr5_2:8418716-8418735 | Msa0754710:CDS | 45.0% | |
| GCATTTGCTCGTCTTACAAG+TGG | - | chr5_2:8418746-8418765 | Msa0754710:CDS | 45.0% | |
| CTCGTAGCAAGCTCATTTGA+GGG | + | chr5_2:8418788-8418807 | None:intergenic | 45.0% | |
| ATAGCTATGGGATTTCCTGG+TGG | - | chr5_2:8419744-8419763 | Msa0754710:intron | 45.0% | |
| AAGAGAGAACTGTGTTGCAG+GGG | - | chr5_2:8419865-8419884 | Msa0754710:intron | 45.0% | |
| GGGGTTCTATCGAAATCACA+TGG | - | chr5_2:8419884-8419903 | Msa0754710:intron | 45.0% | |
| TTGCTGTATGAGCTTGTAGG+TGG | + | chr5_2:8420247-8420266 | None:intergenic | 45.0% | |
| TGGTTGCTGTATGAGCTTGT+AGG | + | chr5_2:8420250-8420269 | None:intergenic | 45.0% | |
| TGTTCAGAGAGGTTGTACGA+TGG | - | chr5_2:8420517-8420536 | Msa0754710:intron | 45.0% | |
| !! | GTACGATGGATCACTTTTCC+AGG | - | chr5_2:8420531-8420550 | Msa0754710:intron | 45.0% |
| !! | ACGATGGATCACTTTTCCAG+GGG | - | chr5_2:8420533-8420552 | Msa0754710:intron | 45.0% |
| TCCAGTTGGAGGCAAATGAT+GGG | + | chr5_2:8420636-8420655 | None:intergenic | 45.0% | |
| TTCCAGTTGGAGGCAAATGA+TGG | + | chr5_2:8420637-8420656 | None:intergenic | 45.0% | |
| !! | CGTCTGCCCTATTGATTTCT+TGG | - | chr5_2:8421558-8421577 | Msa0754710:intron | 45.0% |
| ! | GAGTTGACTTCAGAGACTTG+AGG | - | chr5_2:8421781-8421800 | Msa0754710:intron | 45.0% |
| GTTTCATCTTACCTTCGTCC+GGG | + | chr5_2:8422115-8422134 | None:intergenic | 45.0% | |
| GGCTTCACAAATGCCCTTAT+TGG | - | chr5_2:8422210-8422229 | Msa0754710:intron | 45.0% | |
| ATCGACAGGGAGATTTCTAC+TGG | - | chr5_2:8422580-8422599 | Msa0754710:CDS | 45.0% | |
| TTGTGTTCATCCAACTGCCA+AGG | + | chr5_2:8422943-8422962 | None:intergenic | 45.0% | |
| AGCTGGGATCTTTCTCTGAA+GGG | + | chr5_2:8423125-8423144 | None:intergenic | 45.0% | |
| !! | AGGGTTGACTTTTCCAGGTA+GGG | + | chr5_2:8423191-8423210 | None:intergenic | 45.0% |
| AAAGTCAACCCTGCAAGCAA+AGG | - | chr5_2:8423199-8423218 | Msa0754710:intron | 45.0% | |
| TGTCAGATCCTTTGCTTGCA+GGG | + | chr5_2:8423210-8423229 | None:intergenic | 45.0% | |
| ATGTCAGATCCTTTGCTTGC+AGG | + | chr5_2:8423211-8423230 | None:intergenic | 45.0% | |
| ATTCTCAGAGAGCGATGAAG+AGG | - | chr5_2:8423309-8423328 | Msa0754710:intron | 45.0% | |
| !! | GATTCCATGTTGGTGGTGTT+AGG | + | chr5_2:8423538-8423557 | None:intergenic | 45.0% |
| CCCTATAGATTCCATGTTGG+TGG | + | chr5_2:8423545-8423564 | None:intergenic | 45.0% | |
| TGTGTATAGCCCTTTACACC+GGG | - | chr5_2:8423688-8423707 | Msa0754710:five_prime_UTR | 45.0% | |
| TTTACCTGTGGGTATGATCC+CGG | + | chr5_2:8423709-8423728 | None:intergenic | 45.0% | |
| GGATCATACCCACAGGTAAA+AGG | - | chr5_2:8423709-8423728 | Msa0754710:five_prime_UTR | 45.0% | |
| TACCCACAGGTAAAAGGATC+AGG | - | chr5_2:8423715-8423734 | Msa0754710:five_prime_UTR | 45.0% | |
| ! | TGCCTGATCCTTTTACCTGT+GGG | + | chr5_2:8423720-8423739 | None:intergenic | 45.0% |
| ! | AGGGTGTTAGAATGTCCTCA+AGG | + | chr5_2:8423856-8423875 | None:intergenic | 45.0% |
| ATAGTGTAGAGTCACCGGCA+CGG | + | chr5_2:8417516-8417535 | None:intergenic | 50.0% | |
| AGTCTTCGAAGATGGAGGAG+CGG | + | chr5_2:8418576-8418595 | None:intergenic | 50.0% | |
| GACTGAGAACAGTGGCATGT+CGG | - | chr5_2:8418724-8418743 | Msa0754710:CDS | 50.0% | |
| GCTCGTCTTACAAGTGGGAT+TGG | - | chr5_2:8418752-8418771 | Msa0754710:CDS | 50.0% | |
| GCTCGTAGCAAGCTCATTTG+AGG | + | chr5_2:8418789-8418808 | None:intergenic | 50.0% | |
| !! | AGGGTTGGTGGACTCTTCAA+AGG | - | chr5_2:8418853-8418872 | Msa0754710:intron | 50.0% |
| CGTGTTCCCCGTCATGTTAA+AGG | - | chr5_2:8419435-8419454 | Msa0754710:intron | 50.0% | |
| CCAGAGCTAAAATCACCACC+AGG | + | chr5_2:8419762-8419781 | None:intergenic | 50.0% | |
| !!! | CCTGGTGGTGATTTTAGCTC+TGG | - | chr5_2:8419759-8419778 | Msa0754710:intron | 50.0% |
| !! | TGGATCACTTTTCCAGGGGA+AGG | - | chr5_2:8420537-8420556 | Msa0754710:intron | 50.0% |
| !! | CAAGGTCTCGGTGCCAATTT+AGG | - | chr5_2:8420945-8420964 | Msa0754710:intron | 50.0% |
| CACGAGACTGAGACTTCTGA+AGG | - | chr5_2:8421342-8421361 | Msa0754710:CDS | 50.0% | |
| AAAGCTGGTATGGGAAGGAC+AGG | - | chr5_2:8421713-8421732 | Msa0754710:intron | 50.0% | |
| TCAATGGCTTCCTCAGCAGT+GGG | + | chr5_2:8421892-8421911 | None:intergenic | 50.0% | |
| ATCAATGGCTTCCTCAGCAG+TGG | + | chr5_2:8421893-8421912 | None:intergenic | 50.0% | |
| TTCCACAGGTGTATGCTGAG+AGG | - | chr5_2:8422182-8422201 | Msa0754710:intron | 50.0% | |
| TCCACAGGTGTATGCTGAGA+GGG | - | chr5_2:8422183-8422202 | Msa0754710:intron | 50.0% | |
| GGTGTATGCTGAGAGGGTTT+CGG | - | chr5_2:8422189-8422208 | Msa0754710:intron | 50.0% | |
| CCAACCAATTCTGTCAGACC+TGG | + | chr5_2:8422537-8422556 | None:intergenic | 50.0% | |
| CCAGGTCTGACAGAATTGGT+TGG | - | chr5_2:8422534-8422553 | Msa0754710:CDS | 50.0% | |
| CTGGAATGTATGGCAGAGCT+GGG | + | chr5_2:8422837-8422856 | None:intergenic | 50.0% | |
| ! | TCTGGAATGTATGGCAGAGC+TGG | + | chr5_2:8422838-8422857 | None:intergenic | 50.0% |
| GTCAGTTTCTCCTTGGCAGT+TGG | - | chr5_2:8422930-8422949 | Msa0754710:intron | 50.0% | |
| GAGCTGGGATCTTTCTCTGA+AGG | + | chr5_2:8423126-8423145 | None:intergenic | 50.0% | |
| AGAGAAAGATCCCAGCTCCA+GGG | - | chr5_2:8423128-8423147 | Msa0754710:intron | 50.0% | |
| GTTCCAGGTCGAAGTTGTGA+TGG | - | chr5_2:8423150-8423169 | Msa0754710:intron | 50.0% | |
| CTACCATCACAACTTCGACC+TGG | + | chr5_2:8423156-8423175 | None:intergenic | 50.0% | |
| !! | CAGGGTTGACTTTTCCAGGT+AGG | + | chr5_2:8423192-8423211 | None:intergenic | 50.0% |
| !! | CTTGCAGGGTTGACTTTTCC+AGG | + | chr5_2:8423196-8423215 | None:intergenic | 50.0% |
| AGCGATGAAGAGGAGACCAA+GGG | - | chr5_2:8423319-8423338 | Msa0754710:intron | 50.0% | |
| AGGAGACCAAGGGAACACAA+AGG | - | chr5_2:8423329-8423348 | Msa0754710:intron | 50.0% | |
| AGACCAAGGGAACACAAAGG+AGG | - | chr5_2:8423332-8423351 | Msa0754710:intron | 50.0% | |
| GACCAAGGGAACACAAAGGA+GGG | - | chr5_2:8423333-8423352 | Msa0754710:intron | 50.0% | |
| TTCCCTCCTTTGTGTTCCCT+TGG | + | chr5_2:8423338-8423357 | None:intergenic | 50.0% | |
| GGAACCTCATCAAGCATCTG+AGG | - | chr5_2:8423381-8423400 | Msa0754710:intron | 50.0% | |
| AGGCCACTACTGACCATGTA+GGG | - | chr5_2:8423401-8423420 | Msa0754710:intron | 50.0% | |
| CATCCCTACATGGTCAGTAG+TGG | + | chr5_2:8423407-8423426 | None:intergenic | 50.0% | |
| AGGTCCTAACACCACCAACA+TGG | - | chr5_2:8423531-8423550 | Msa0754710:intron | 50.0% | |
| GGGTATGATCCCGGTGTAAA+GGG | + | chr5_2:8423700-8423719 | None:intergenic | 50.0% | |
| TGGGTATGATCCCGGTGTAA+AGG | + | chr5_2:8423701-8423720 | None:intergenic | 50.0% | |
| ! | GTGCCTGATCCTTTTACCTG+TGG | + | chr5_2:8423721-8423740 | None:intergenic | 50.0% |
| GGACGGAGAGGAACATCATA+CGG | + | chr5_2:8423835-8423854 | None:intergenic | 50.0% | |
| GCAAACACTCTGTTCCGTGC+CGG | - | chr5_2:8417499-8417518 | Msa0754710:three_prime_UTR | 55.0% | |
| GTCTTCGAAGATGGAGGAGC+GGG | + | chr5_2:8418575-8418594 | None:intergenic | 55.0% | |
| !! | GAGCTTGCTACGAGCAGTTC+AGG | - | chr5_2:8418794-8418813 | Msa0754710:intron | 55.0% |
| AGGCAGTGCAGACCAAAGCA+CGG | - | chr5_2:8418885-8418904 | Msa0754710:intron | 55.0% | |
| GCCCATCATTTGCCTCCAAC+TGG | - | chr5_2:8420632-8420651 | Msa0754710:intron | 55.0% | |
| !! | GTGGTGTTGACTTGGGACCT+TGG | - | chr5_2:8420909-8420928 | Msa0754710:intron | 55.0% |
| CTTGAGAGGAGGACACTCCA+AGG | + | chr5_2:8420929-8420948 | None:intergenic | 55.0% | |
| ! | CTTGGAGTGTCCTCCTCTCA+AGG | - | chr5_2:8420927-8420946 | Msa0754710:intron | 55.0% |
| GTGTCCTCCTCTCAAGGTCT+CGG | - | chr5_2:8420933-8420952 | Msa0754710:intron | 55.0% | |
| ! | ATTGGCACCGAGACCTTGAG+AGG | + | chr5_2:8420943-8420962 | None:intergenic | 55.0% |
| ! | GCAGTTTTTCCCCACTGCTG+AGG | - | chr5_2:8421879-8421898 | Msa0754710:intron | 55.0% |
| CAATGGCTTCCTCAGCAGTG+GGG | + | chr5_2:8421891-8421910 | None:intergenic | 55.0% | |
| TTCAACGGACAAGTCCAGCC+CGG | - | chr5_2:8422094-8422113 | Msa0754710:intron | 55.0% | |
| ACCCTCTCAGCATACACCTG+TGG | + | chr5_2:8422187-8422206 | None:intergenic | 55.0% | |
| TTTGCATTACCAGGGGAGCC+AGG | - | chr5_2:8422516-8422535 | Msa0754710:CDS | 55.0% | |
| GGAGCCAGGTCTGACAGAAT+TGG | - | chr5_2:8422530-8422549 | Msa0754710:CDS | 55.0% | |
| CAGAGAAAGATCCCAGCTCC+AGG | - | chr5_2:8423127-8423146 | Msa0754710:intron | 55.0% | |
| ACAACTTCGACCTGGAACCC+TGG | + | chr5_2:8423148-8423167 | None:intergenic | 55.0% | |
| GACTATGATGGCACCCTACC+TGG | - | chr5_2:8423175-8423194 | Msa0754710:intron | 55.0% | |
| GAGCGATGAAGAGGAGACCA+AGG | - | chr5_2:8423318-8423337 | Msa0754710:intron | 55.0% | |
| GTGGCCTCAGATGCTTGATG+AGG | + | chr5_2:8423388-8423407 | None:intergenic | 55.0% | |
| GAGGCCACTACTGACCATGT+AGG | - | chr5_2:8423400-8423419 | Msa0754710:intron | 55.0% | |
| TACACCGGGATCATACCCAC+AGG | - | chr5_2:8423702-8423721 | Msa0754710:five_prime_UTR | 55.0% | |
| GATGTTCCTCTCCGTCCTTG+AGG | - | chr5_2:8423838-8423857 | Msa0754710:five_prime_UTR | 55.0% | |
| GAATGTCCTCAAGGACGGAG+AGG | + | chr5_2:8423847-8423866 | None:intergenic | 55.0% | |
| GGCGAGTAGTTAGCCGGTGA+CGG | + | chr5_2:8417657-8417676 | None:intergenic | 60.0% | |
| AGTGGATCGCTTACCGGCGA+CGG | + | chr5_2:8417678-8417697 | None:intergenic | 60.0% | |
| CATCTTACCTTCGTCCGGGC+TGG | + | chr5_2:8422111-8422130 | None:intergenic | 60.0% | |
| CGCGCGACAACATCCCTACA+TGG | + | chr5_2:8423417-8423436 | None:intergenic | 60.0% | |
| AGGGATGTTGTCGCGCGCAA+CGG | - | chr5_2:8423420-8423439 | Msa0754710:intron | 60.0% | |
| CCAGCAGCATGACGAACGCA+CGG | - | chr5_2:8423456-8423475 | Msa0754710:intron | 60.0% | |
| GGCGACGGCGAGTAGTTAGC+CGG | + | chr5_2:8417663-8417682 | None:intergenic | 65.0% | |
| GGCTAACTACTCGCCGTCGC+CGG | - | chr5_2:8417662-8417681 | Msa0754710:CDS | 65.0% | |
| ! | GGCACCGAGACCTTGAGAGG+AGG | + | chr5_2:8420940-8420959 | None:intergenic | 65.0% |
| GACAAGTCCAGCCCGGACGA+AGG | - | chr5_2:8422101-8422120 | Msa0754710:intron | 65.0% | |
| TCTGTCAGACCTGGCTCCCC+TGG | + | chr5_2:8422528-8422547 | None:intergenic | 65.0% | |
| GATCCCAGCTCCAGGGTTCC+AGG | - | chr5_2:8423135-8423154 | Msa0754710:intron | 65.0% | |
| CGACCTGGAACCCTGGAGCT+GGG | + | chr5_2:8423141-8423160 | None:intergenic | 65.0% | |
| TCGACCTGGAACCCTGGAGC+TGG | + | chr5_2:8423142-8423161 | None:intergenic | 65.0% | |
| CCGTGCGTTCGTCATGCTGC+TGG | + | chr5_2:8423459-8423478 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8417378 | 8423896 | 8417378 | ID=Msa0754710;Name=Msa0754710 |
| chr5_2 | mRNA | 8417378 | 8423896 | 8417378 | ID=Msa0754710-mRNA-1;Parent=Msa0754710;Name=Msa0754710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=329|1|1|1|0.91|0.84|13|257|587 |
| chr5_2 | exon | 8417378 | 8418144 | 8417378 | ID=Msa0754710-mRNA-1:exon:3842;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8418256 | 8418325 | 8418256 | ID=Msa0754710-mRNA-1:exon:3841;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8418673 | 8418803 | 8418673 | ID=Msa0754710-mRNA-1:exon:3840;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8418887 | 8418933 | 8418887 | ID=Msa0754710-mRNA-1:exon:3839;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8419008 | 8419084 | 8419008 | ID=Msa0754710-mRNA-1:exon:3838;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8419152 | 8419216 | 8419152 | ID=Msa0754710-mRNA-1:exon:3837;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8419305 | 8419391 | 8419305 | ID=Msa0754710-mRNA-1:exon:3836;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8419505 | 8419681 | 8419505 | ID=Msa0754710-mRNA-1:exon:3835;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8420716 | 8420781 | 8420716 | ID=Msa0754710-mRNA-1:exon:3834;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8421333 | 8421389 | 8421333 | ID=Msa0754710-mRNA-1:exon:3833;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8421474 | 8421575 | 8421474 | ID=Msa0754710-mRNA-1:exon:3832;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8422334 | 8422731 | 8422334 | ID=Msa0754710-mRNA-1:exon:3831;Parent=Msa0754710-mRNA-1 |
| chr5_2 | exon | 8423591 | 8423896 | 8423591 | ID=Msa0754710-mRNA-1:exon:3830;Parent=Msa0754710-mRNA-1 |
| chr5_2 | five_prime_UTR | 8423591 | 8423896 | 8423591 | ID=Msa0754710-mRNA-1:five_prime_utr;Parent=Msa0754710-mRNA-1 |
| chr5_2 | five_prime_UTR | 8422709 | 8422731 | 8422709 | ID=Msa0754710-mRNA-1:five_prime_utr;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8422334 | 8422708 | 8422334 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8421474 | 8421575 | 8421474 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8421333 | 8421389 | 8421333 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8420716 | 8420781 | 8420716 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8419505 | 8419681 | 8419505 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8419305 | 8419391 | 8419305 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8419152 | 8419216 | 8419152 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8419008 | 8419084 | 8419008 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8418887 | 8418933 | 8418887 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8418673 | 8418803 | 8418673 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8418256 | 8418325 | 8418256 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | CDS | 8417635 | 8418144 | 8417635 | ID=Msa0754710-mRNA-1:cds;Parent=Msa0754710-mRNA-1 |
| chr5_2 | three_prime_UTR | 8417378 | 8417634 | 8417378 | ID=Msa0754710-mRNA-1:three_prime_utr;Parent=Msa0754710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
