AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0902360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902360 MtrunA17_Chr5g0427251 98.780 1230 14 1 1 1229 1 1230 0.0 2530
Msa0902360 MtrunA17_Chr5g0448351 45.393 1042 492 15 214 1229 207 1197 0.0 902
Msa0902360 MtrunA17_Chr5g0401841 61.667 60 14 2 644 694 4 63 3.20e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902360 AT4G24610.1 62.648 1186 395 12 47 1229 10 1150 0.0 1495
Msa0902360 AT4G24610.3 62.679 1187 397 12 47 1229 10 1154 0.0 1493
Msa0902360 AT4G24610.4 62.595 1187 395 13 47 1229 10 1151 0.0 1491
Msa0902360 AT4G24610.2 62.626 1188 397 13 47 1229 10 1155 0.0 1489
Msa0902360 AT5G65440.1 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0902360 AT5G65440.8 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0902360 AT5G65440.9 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0902360 AT5G65440.6 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0902360 AT5G65440.4 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0902360 AT5G65440.7 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0902360 AT5G65440.3 54.573 973 401 5 292 1229 159 1125 0.0 1114
Msa0902360 AT5G65440.2 53.854 947 416 8 229 1160 43 983 0.0 1044
Msa0902360 AT5G65440.5 56.766 872 368 5 292 1160 159 1024 0.0 1042
Msa0902360 AT5G48310.2 43.744 1031 500 17 221 1229 156 1128 0.0 858
Msa0902360 AT5G48310.1 45.955 927 439 13 314 1229 280 1155 0.0 850

Find 299 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTAATTCTTTAGGTTTA+AGG 0.101745 6_1:-100618611 Msa0902360:five_prime_UTR
GTACTTGATTCTGCTTTATT+TGG 0.141623 6_1:+100617183 None:intergenic
ACAGAGTTTGCTTCATATTA+TGG 0.161719 6_1:-100615141 Msa0902360:CDS
GTAAATAAAGAGGGTTATTA+AGG 0.183967 6_1:-100611211 Msa0902360:three_prime_UTR
CTTCTGGTTGGCACGCTCTT+AGG 0.188615 6_1:-100616232 Msa0902360:CDS
AGCATGGCACCTAAGAAATT+TGG 0.201534 6_1:-100612779 Msa0902360:CDS
GATTCCAAGGGAAAGCATTT+TGG 0.208871 6_1:-100615641 Msa0902360:CDS
CGCGTCTTTGCCTTCACGCT+TGG 0.211183 6_1:-100616728 Msa0902360:CDS
TAGACCGTTTGGCAAGTTTC+TGG 0.237058 6_1:+100612744 None:intergenic
GCTTACTCCTGCTACAAAAT+TGG 0.256730 6_1:+100611149 None:intergenic
GATTCGGAAGAGGAAGTTTA+TGG 0.256978 6_1:-100618026 Msa0902360:CDS
TATTTAAGCCCAAATTTCTT+AGG 0.261853 6_1:+100612770 None:intergenic
TTGCCATCTGTCGAGGTTAT+TGG 0.267012 6_1:-100611823 Msa0902360:CDS
TGCATAAAGCTTAATTCTTT+AGG 0.276770 6_1:-100618618 Msa0902360:five_prime_UTR
CTATTTCCCTTCATGATAAC+AGG 0.279831 6_1:+100614909 None:intergenic
AGTGACACATAAAATTAAAA+TGG 0.285788 6_1:-100616297 Msa0902360:CDS
TCTTGAGTAGAACCACAAAA+TGG 0.289207 6_1:+100617255 None:intergenic
TCCATGGACCATGTAATTCT+AGG 0.298952 6_1:+100615175 None:intergenic
TACCACCACCATCAAAATTT+AGG 0.302751 6_1:-100618136 Msa0902360:CDS
TTAATATGCTCTTCACTTAC+TGG 0.302787 6_1:-100611101 Msa0902360:three_prime_UTR
CATACCTTGCACAGCTTCAT+AGG 0.304708 6_1:+100616064 None:intergenic
TCCATTTGTATATTCTTGTT+TGG 0.307399 6_1:-100613375 Msa0902360:CDS
TCACAGATGCAACAACTTCT+AGG 0.308271 6_1:-100611362 Msa0902360:CDS
ATTCAGAGGTTGGTTCTATT+AGG 0.312085 6_1:-100618564 Msa0902360:five_prime_UTR
TTCACCATTAGCTCCTCTTC+TGG 0.318680 6_1:+100616533 None:intergenic
TAGGTTTAAGGTTTCAAAAT+TGG 0.319415 6_1:-100618599 Msa0902360:five_prime_UTR
AAACCCTGTGCATAAATCTT+AGG 0.320391 6_1:-100614087 Msa0902360:CDS
GCATCCACTCCACCTTTGAT+AGG 0.324289 6_1:+100613409 None:intergenic
TGCCATCTGTCGAGGTTATT+GGG 0.326097 6_1:-100611822 Msa0902360:CDS
CAGAAACTGGTTTGGGCCTC+AGG 0.332585 6_1:+100614334 None:intergenic
ATAAAATAACTTACAACATA+TGG 0.335183 6_1:+100615773 None:intergenic
TTATGGTGGAAGGTATTCTT+TGG 0.335278 6_1:-100618009 Msa0902360:CDS
TCTAGAACCAAGGTATATTC+TGG 0.337993 6_1:+100613064 None:intergenic
ATGATAATCAATCAATCATA+TGG 0.346525 6_1:-100611178 Msa0902360:three_prime_UTR
ATGAAAAGTGGCGGCGGTAG+AGG 0.346916 6_1:-100618167 Msa0902360:CDS
CAGTTTCTGTCACTACTTCC+AGG 0.351135 6_1:-100614320 Msa0902360:intron
AGAAGTTGCAATGAAAGTTC+AGG 0.359320 6_1:-100615214 Msa0902360:CDS
AATGGTGCTGCTAAGAGATA+TGG 0.361058 6_1:-100617957 Msa0902360:CDS
AAATCATCTCCAAGACTATC+TGG 0.365820 6_1:+100615680 None:intergenic
GAGAATAGATCATGGTATAA+AGG 0.367349 6_1:-100611653 Msa0902360:CDS
GCAAAGCTCTGTGCTGTATA+TGG 0.367805 6_1:+100613665 None:intergenic
TGAAAGATCTCTTTGAAAAT+CGG 0.369680 6_1:+100613563 None:intergenic
AAGGCGAGGTGGTTGTGAAT+TGG 0.379609 6_1:+100616902 None:intergenic
GCATGGCACCTAAGAAATTT+GGG 0.379782 6_1:-100612778 Msa0902360:CDS
AAACTGTTGTCCTTGTGATT+AGG 0.380356 6_1:+100611263 None:intergenic
GCAAAGATAGACGTTTATCT+TGG 0.381941 6_1:+100613350 None:intergenic
TTGCAGTCAAAACTATCTTC+TGG 0.383266 6_1:-100616248 Msa0902360:CDS
GCGTCTTTGCCTTCACGCTT+GGG 0.385460 6_1:-100616727 Msa0902360:CDS
TGTGTCAGGGAACCATTTGC+AGG 0.387579 6_1:+100616185 None:intergenic
GGTGCTGTGTTTCCAGCATT+TGG 0.390436 6_1:+100612516 None:intergenic
TATCTGTTCAATTTCGTCCT+TGG 0.391761 6_1:+100614504 None:intergenic
TTGAACTGTGATTCAATCCT+TGG 0.396509 6_1:+100612558 None:intergenic
CTTGATGAGTCATCTTTCTC+TGG 0.397406 6_1:-100614451 Msa0902360:CDS
AAAGTTCAGGAACTACTTGC+AGG 0.398147 6_1:-100612454 Msa0902360:CDS
CAAGGCAGGAGCTGCATGAC+TGG 0.398224 6_1:+100614402 None:intergenic
GAATAATGAAAGCTGTTTGA+TGG 0.399448 6_1:-100614146 Msa0902360:CDS
CTGGAAGTAGTGACAGAAAC+TGG 0.403028 6_1:+100614321 None:intergenic
CTTTGAACATTCATCCTTGA+AGG 0.404054 6_1:+100617660 None:intergenic
CTTTACTTAGAGATGCATTT+GGG 0.409059 6_1:-100616659 Msa0902360:intron
TCGTCCAGAGAAACACTTAC+TGG 0.409705 6_1:-100617873 Msa0902360:CDS
TGTGAATCAGAAACCGTAAT+GGG 0.415519 6_1:+100618747 None:intergenic
TAGCGGTTCAAATAGTGATA+TGG 0.420595 6_1:-100618060 Msa0902360:CDS
TATCTCTTAGCAGCACCATT+GGG 0.421520 6_1:+100617960 None:intergenic
TAGTTGAAGAAGACGCCATT+AGG 0.423070 6_1:-100615819 Msa0902360:CDS
TAAATAAAGAGGGTTATTAA+GGG 0.426330 6_1:-100611210 Msa0902360:three_prime_UTR
TATGGACGCCAGCGTTGATT+CGG 0.426775 6_1:-100618042 Msa0902360:CDS
CGCTTGGGCGATGCAGTGTA+TGG 0.427505 6_1:-100616712 Msa0902360:CDS
GGCACGCTCTTAGGAAAGTT+CGG 0.428629 6_1:-100616223 Msa0902360:CDS
AATTACATGGTCCATGGAAA+TGG 0.428646 6_1:-100615170 Msa0902360:CDS
TTAGCAGCACTCCTCATTAC+CGG 0.429720 6_1:+100617828 None:intergenic
TCTTCCAGTAAGTGTTTCTC+TGG 0.430514 6_1:+100617869 None:intergenic
TCTTTACTTAGAGATGCATT+TGG 0.430566 6_1:-100616660 Msa0902360:CDS
AATACTGTGAAGATAGCTTA+TGG 0.431220 6_1:+100611865 None:intergenic
GTACTTTGAAATCTGTATCC+AGG 0.431525 6_1:-100617164 Msa0902360:CDS
CTTGAGTAGAACCACAAAAT+GGG 0.433325 6_1:+100617256 None:intergenic
GATGTCGAGCATCCTCTTCA+AGG 0.434680 6_1:+100612587 None:intergenic
TGCAGCTCCTGCCTTGGAAC+CGG 0.440849 6_1:-100614395 Msa0902360:CDS
TGTTATTCATTGTAATACTT+TGG 0.442744 6_1:-100611037 Msa0902360:three_prime_UTR
GGCTGCTATCGCTGATAATC+CGG 0.442816 6_1:-100615600 Msa0902360:intron
CATTCCTAAGATTTATGCAC+AGG 0.442823 6_1:+100614083 None:intergenic
GTGGGGCTCGACCCTCCTAC+TGG 0.443564 6_1:-100616338 Msa0902360:CDS
TGATGCTGAGAGCAAAGTTC+AGG 0.447811 6_1:-100612467 Msa0902360:CDS
TGCTAATAAGTTACCTGTCT+CGG 0.449263 6_1:-100618099 Msa0902360:CDS
TGTTCAAAGTTCTGCAGAAA+AGG 0.451148 6_1:-100617646 Msa0902360:intron
AGATCTCGTGATCCGATTAG+TGG 0.452469 6_1:-100618191 Msa0902360:CDS
GTACCACATTTGCCTGCAAA+TGG 0.452983 6_1:-100616197 Msa0902360:CDS
TCAAATCTCGAACCCCATTA+CGG 0.453669 6_1:-100618760 Msa0902360:five_prime_UTR
GAACTACTTGCAGGCTATTG+TGG 0.456163 6_1:-100612445 Msa0902360:CDS
CTCTCTAAGCTTAATATCAA+AGG 0.459245 6_1:-100618827 Msa0902360:five_prime_UTR
TTAACAGCCGGTTCCAAGGC+AGG 0.459389 6_1:+100614388 None:intergenic
ATTCATTGTAATACTTTGGT+AGG 0.459523 6_1:-100611033 Msa0902360:three_prime_UTR
CAGAACTGCTACTGGTTCAG+AGG 0.460004 6_1:-100616937 Msa0902360:CDS
GGATCCAGGCTGCAACCTAA+TGG 0.460520 6_1:+100615804 None:intergenic
AACAGCAGATTGCCTTAACT+TGG 0.461204 6_1:-100614949 Msa0902360:CDS
TTGCTCAGATGCCACGGTCT+CGG 0.463158 6_1:-100617929 Msa0902360:CDS
ATATCTCTTAGCAGCACCAT+TGG 0.463834 6_1:+100617959 None:intergenic
CGAACCTCCATGATGCATCT+AGG 0.464652 6_1:+100611308 None:intergenic
GCAGATTATATACCAAGTTA+AGG 0.465872 6_1:+100614937 None:intergenic
AGTAGTGACAGAAACTGGTT+TGG 0.467102 6_1:+100614326 None:intergenic
AGCAGGGCTTATATGTCAGC+AGG 0.469725 6_1:-100617699 Msa0902360:CDS
AGATGACAATAGTCATCTTA+AGG 0.472987 6_1:-100615393 Msa0902360:intron
CGCTATATACAACAAGTCTC+TGG 0.473262 6_1:-100616131 Msa0902360:CDS
GAACCAGACCATGAGCTTGT+TGG 0.474020 6_1:-100615452 Msa0902360:CDS
GGTGCCATGCTATCTTTAAG+AGG 0.479202 6_1:+100612791 None:intergenic
GATCATGGTATAAAGGTTCA+AGG 0.479291 6_1:-100611646 Msa0902360:CDS
GTAATGAGGAGTGCTGCTAA+TGG 0.479572 6_1:-100617825 Msa0902360:CDS
ATAATCAAAATATACTTCCT+AGG 0.479944 6_1:-100614036 Msa0902360:intron
GCTTCTTGCTTACCAAATGC+TGG 0.480620 6_1:-100612528 Msa0902360:CDS
TTGAATCACAGTTCAAATCA+TGG 0.480727 6_1:-100612551 Msa0902360:CDS
TATATGGAAGCAGAAAGATT+TGG 0.484202 6_1:+100613681 None:intergenic
AGTGGCGGCGGTAGAGGGTG+TGG 0.484699 6_1:-100618161 Msa0902360:CDS
TCCAAACAAGAATATACAAA+TGG 0.484801 6_1:+100613374 None:intergenic
TTACAACATATGGACTTCAC+TGG 0.488136 6_1:+100615783 None:intergenic
TCTTATCAGAATCGACTACT+AGG 0.490024 6_1:-100614532 Msa0902360:intron
TCTCTAAGCTTAATATCAAA+GGG 0.490643 6_1:-100618826 Msa0902360:five_prime_UTR
CAGTCATGCAGCTCCTGCCT+TGG 0.491978 6_1:-100614401 Msa0902360:CDS
CAAGCTCATGGTCTGGTTCA+CGG 0.492655 6_1:+100615456 None:intergenic
TAAATTCAACCCACCTCCTC+AGG 0.493294 6_1:+100612704 None:intergenic
GTACTACGTGTTGCAGAAGT+TGG 0.493392 6_1:+100617207 None:intergenic
ATAGGCACATGTAGACCGTT+TGG 0.494429 6_1:+100612733 None:intergenic
GTTTACTTGCTTAATCAGAA+AGG 0.494637 6_1:+100618799 None:intergenic
GAAGTTGCAATGAAAGTTCA+GGG 0.494648 6_1:-100615213 Msa0902360:CDS
ATTAAGTTACCTGTCCCATT+CGG 0.494879 6_1:+100611798 None:intergenic
CTCATAGCTGTGTTTGAGAA+TGG 0.497727 6_1:+100618212 None:intergenic
TTCAAAGAGATCTTTCAGGC+TGG 0.497753 6_1:-100613557 Msa0902360:CDS
ACGCCCAAAATGCTTTCCCT+TGG 0.498791 6_1:+100615637 None:intergenic
AGCATATTAATCTTGTTCCT+AGG 0.501315 6_1:+100611114 None:intergenic
ATGCTTCTAGTGTACCTTCA+AGG 0.501694 6_1:-100617674 Msa0902360:CDS
TCAACCAGAAGAGGAGCTAA+TGG 0.506702 6_1:-100616537 Msa0902360:CDS
ACAAGGAATGACGAGGGATC+CGG 0.506996 6_1:-100617847 Msa0902360:CDS
GGAGCTGCATGACTGGATGC+TGG 0.507579 6_1:+100614409 None:intergenic
CTTCTTAGTCCTATCAAAGG+TGG 0.511888 6_1:-100613418 Msa0902360:intron
TTGCCAACAAGCTCATGGTC+TGG 0.512703 6_1:+100615449 None:intergenic
ATATGGACTTCACTGGATCC+AGG 0.515067 6_1:+100615790 None:intergenic
GAAGATTCTTCAAGATTCAA+AGG 0.515408 6_1:-100611951 Msa0902360:CDS
CTCATATCTTGTCCACCGAC+AGG 0.515457 6_1:-100613624 Msa0902360:CDS
AGTTCTGCTACTGGTGATGA+TGG 0.517116 6_1:+100613600 None:intergenic
CGAGGTTATTGGGACCGAAT+GGG 0.517152 6_1:-100611812 Msa0902360:CDS
AAGTTGGTGTAACAACTTTG+CGG 0.517995 6_1:-100616100 Msa0902360:CDS
TCGGAAGAGGAAGTTTATGG+TGG 0.518785 6_1:-100618023 Msa0902360:CDS
GCAGTACGCAAAGTCAAAGT+GGG 0.519161 6_1:-100616356 Msa0902360:intron
TGATACCTTGCATGAAATGT+TGG 0.522674 6_1:+100616879 None:intergenic
CAATACACATGTAAATAAAG+AGG 0.523131 6_1:-100611221 Msa0902360:three_prime_UTR
TGAATCACAGTTCAAATCAT+GGG 0.525286 6_1:-100612550 Msa0902360:CDS
TTGGGGACTCTGTTGTCTTG+TGG 0.525829 6_1:+100617978 None:intergenic
AAAACTTATTGGCAAGATGA+AGG 0.526439 6_1:-100616465 Msa0902360:CDS
ATGGTTCTCTAACTTATCCC+TGG 0.527134 6_1:+100617146 None:intergenic
CATTGAAGTTCAAGATTCCA+AGG 0.529687 6_1:-100615654 Msa0902360:CDS
TCGAGGTTATTGGGACCGAA+TGG 0.530623 6_1:-100611813 Msa0902360:CDS
TATATTCATCTGTGTCAGAA+AGG 0.531164 6_1:+100614176 None:intergenic
GTGAAGGCAAAGACGCGCAC+AGG 0.531948 6_1:+100616734 None:intergenic
GTCTCTGGACTCCTAAAAGT+TGG 0.532031 6_1:-100616116 Msa0902360:CDS
TGCGTTCACAGAACTGCTAC+TGG 0.533287 6_1:-100616945 Msa0902360:intron
TAAGCAACTCAACTGCTCCT+AGG 0.533539 6_1:-100611131 Msa0902360:three_prime_UTR
GCTTGCACCTGTTATCATGA+AGG 0.534068 6_1:-100614916 Msa0902360:CDS
TTTCCGAGCTTGCATCTCCA+TGG 0.536492 6_1:+100617127 None:intergenic
AGCTTGTAAAGTTTAACAGC+CGG 0.536736 6_1:+100614376 None:intergenic
ACCTAGAATTACATGGTCCA+TGG 0.537176 6_1:-100615176 Msa0902360:CDS
AAGTTCAGGGCTTTCAGCAA+AGG 0.539878 6_1:-100615200 Msa0902360:CDS
CGCCAGCGTTGATTCGGAAG+AGG 0.540156 6_1:-100618036 Msa0902360:CDS
GAGACAGGTAACTTATTAGC+AGG 0.540938 6_1:+100618101 None:intergenic
GACGCCATTAGGTTGCAGCC+TGG 0.541548 6_1:-100615808 Msa0902360:CDS
CTAGCTAACTGCTCTTTCAG+TGG 0.542632 6_1:+100611890 None:intergenic
AAGTTTAACAGCCGGTTCCA+AGG 0.542939 6_1:+100614384 None:intergenic
GCTGCTAATGGAAGGCAGAA+TGG 0.544705 6_1:-100617813 Msa0902360:CDS
CTGTCGGTGGACAAGATATG+AGG 0.545131 6_1:+100613625 None:intergenic
GCGAGGTGGTTGTGAATTGG+AGG 0.545388 6_1:+100616905 None:intergenic
TATCAGCGATAGCAGCCACT+TGG 0.545567 6_1:+100615606 None:intergenic
GTAGTGACAGAAACTGGTTT+GGG 0.545700 6_1:+100614327 None:intergenic
TAATATGCTCTTCACTTACT+GGG 0.545823 6_1:-100611100 Msa0902360:three_prime_UTR
GCCTTCCAACATTTCATGCA+AGG 0.546520 6_1:-100616884 Msa0902360:intron
CCGCTGGCCAGAATATACCT+TGG 0.546895 6_1:-100613071 Msa0902360:CDS
TACTTTGAAATCTGTATCCA+GGG 0.547378 6_1:-100617163 Msa0902360:CDS
TTATTGGGACCGAATGGGAC+AGG 0.547657 6_1:-100611807 Msa0902360:intron
ATGACTATTGTCATCTGCAC+TGG 0.548196 6_1:+100615400 None:intergenic
ATGGTGCTGCTAAGAGATAT+GGG 0.549903 6_1:-100617956 Msa0902360:CDS
TAGATATCTATCGTATGTCA+TGG 0.550386 6_1:-100614985 Msa0902360:CDS
GTGTGAATCAGAAACCGTAA+TGG 0.552337 6_1:+100618746 None:intergenic
TGATAATCAATCAATCATAT+GGG 0.552944 6_1:-100611177 Msa0902360:three_prime_UTR
TTCCTTCTTAGTCCTATCAA+AGG 0.554631 6_1:-100613421 Msa0902360:intron
AGCTCCTCTTAAAGATAGCA+TGG 0.555560 6_1:-100612795 Msa0902360:CDS
TGATACCTCTTGGTGGCTCA+AGG 0.555917 6_1:+100614878 None:intergenic
TTCCCTGACACATAAAAGCT+TGG 0.559129 6_1:-100616174 Msa0902360:CDS
ACAGAAAAGAGAATAGATCA+TGG 0.559892 6_1:-100611661 Msa0902360:CDS
TCATGATATCTTATCTCCTG+AGG 0.562589 6_1:-100614350 Msa0902360:CDS
CAAGTAGGGAGTAGTATCAA+TGG 0.563189 6_1:-100617735 Msa0902360:CDS
GTTTCTGATTCACACTTCTG+TGG 0.564909 6_1:-100618738 Msa0902360:five_prime_UTR
CTTGCACCTGTTATCATGAA+GGG 0.565811 6_1:-100614915 Msa0902360:CDS
GAACCATTTGCAGGCAAATG+TGG 0.565898 6_1:+100616194 None:intergenic
GAGCTAATGGTGAAATGCAA+TGG 0.566880 6_1:-100616524 Msa0902360:CDS
GGATGATTCGTCGGATTCTG+CGG 0.568196 6_1:-100617781 Msa0902360:CDS
ACGGTCTACATGTGCCTATG+TGG 0.568735 6_1:-100612729 Msa0902360:CDS
ATGTCCAGAAACTTGCCAAA+CGG 0.569380 6_1:-100612748 Msa0902360:CDS
TCATACATGTCATCAACAAA+GGG 0.569455 6_1:+100613136 None:intergenic
CCGATTAGTGGAATGAAAAG+TGG 0.570072 6_1:-100618179 Msa0902360:CDS
TGACGAGGGATCCGGTAATG+AGG 0.570148 6_1:-100617839 Msa0902360:CDS
GTATCTTGCCAACAAGCTCA+TGG 0.570307 6_1:+100615444 None:intergenic
CTCATACATGTCATCAACAA+AGG 0.571246 6_1:+100613135 None:intergenic
AAGAGGAAGTTTATGGTGGA+AGG 0.571425 6_1:-100618019 Msa0902360:CDS
GCAATGACAAGTTCTGCTAC+TGG 0.573441 6_1:+100613591 None:intergenic
TTTCACTGAGGATGATTCGT+CGG 0.574054 6_1:-100617790 Msa0902360:CDS
TGCCTATGTGGTTCCTGAGG+AGG 0.575224 6_1:-100612717 Msa0902360:intron
CAAAGGAACCTAGAATTACA+TGG 0.575331 6_1:-100615183 Msa0902360:CDS
GACATGCTACATCCAGTAGG+AGG 0.575791 6_1:+100616326 None:intergenic
TCTGTCAAGAGCCATTTCCA+TGG 0.578372 6_1:+100615159 None:intergenic
TGAAAAGTGGCGGCGGTAGA+GGG 0.579262 6_1:-100618166 Msa0902360:CDS
GGAAACATTGACAGACTATG+AGG 0.579854 6_1:-100613104 Msa0902360:CDS
ATGAGGTCATCATTTGCCGC+TGG 0.580095 6_1:-100613087 Msa0902360:CDS
TGCAGTACGCAAAGTCAAAG+TGG 0.581751 6_1:-100616357 Msa0902360:intron
GAACCATGGAGATGCAAGCT+CGG 0.582420 6_1:-100617130 Msa0902360:CDS
TTGACTGCAAATTTGAGAAG+TGG 0.583581 6_1:+100616261 None:intergenic
ATCTTTCTCTGGAATCGTCG+AGG 0.584965 6_1:-100614440 Msa0902360:CDS
AATACACATGTAAATAAAGA+GGG 0.585161 6_1:-100611220 Msa0902360:three_prime_UTR
AGTCAAAACTATCTTCTGGT+TGG 0.585669 6_1:-100616244 Msa0902360:CDS
TGATATTGAGAAGGCGATTG+TGG 0.585814 6_1:-100612849 Msa0902360:CDS
GTCCCAATAACCTCGACAGA+TGG 0.586762 6_1:+100611820 None:intergenic
GGAGGCACCTAGATGCATCA+TGG 0.587292 6_1:-100611315 Msa0902360:CDS
TCCTCCTATGAAGCTGTGCA+AGG 0.588239 6_1:-100616068 Msa0902360:intron
TGCTCGACATCTTACGTCCA+AGG 0.589561 6_1:-100612575 Msa0902360:CDS
AGTGCTTCTTCAACCAGAAG+AGG 0.591826 6_1:-100616546 Msa0902360:CDS
TGGAAGCAGAAAGATTTGGC+AGG 0.594188 6_1:+100613685 None:intergenic
TTCCTCTTCCGAATCAACGC+TGG 0.594375 6_1:+100618034 None:intergenic
TGAGGAGTGCTGCTAATGGA+AGG 0.594622 6_1:-100617821 Msa0902360:CDS
AAGTTAAGGCAATCTGCTGT+TGG 0.596013 6_1:+100614951 None:intergenic
CAATGGAGAACTTTCTAGTG+AGG 0.596450 6_1:-100616507 Msa0902360:CDS
AAATAAAGAGGGTTATTAAG+GGG 0.598297 6_1:-100611209 Msa0902360:three_prime_UTR
TCATTGCAACTTCTAGAACC+AGG 0.599580 6_1:+100615223 None:intergenic
TAGTCCTATCAAAGGTGGAG+TGG 0.600358 6_1:-100613413 Msa0902360:CDS
CTTCTGGTAAGCGGTAGACA+TGG 0.603040 6_1:+100614114 None:intergenic
TTGAGTAGAACCACAAAATG+GGG 0.603689 6_1:+100617257 None:intergenic
AATGCTGGAAACACAGCACC+TGG 0.603796 6_1:-100612513 Msa0902360:CDS
GATACTACTCCCTACTTGTG+TGG 0.604286 6_1:+100617740 None:intergenic
GGCAATAGCTGATATTGAGA+AGG 0.610931 6_1:-100612858 Msa0902360:CDS
GGAATGTTGCTCAGATGCCA+CGG 0.611258 6_1:-100617935 Msa0902360:CDS
ACCTTGCACAGCTTCATAGG+AGG 0.612295 6_1:+100616067 None:intergenic
CTGGAAGACAAGGAATGACG+AGG 0.612503 6_1:-100617854 Msa0902360:CDS
ATCATGGTATAAAGGTTCAA+GGG 0.614850 6_1:-100611645 Msa0902360:CDS
ATGTCGATGATACCTCTTGG+TGG 0.614897 6_1:+100614871 None:intergenic
AGCTTTAGATAAACAGTATG+CGG 0.619900 6_1:-100612825 Msa0902360:CDS
ACTGCATCGCCCAAGCGTGA+AGG 0.619920 6_1:+100616718 None:intergenic
GGCTATTGTGGAGAAACTCG+TGG 0.621189 6_1:-100612433 Msa0902360:CDS
ATGTGCCTATGTGGTTCCTG+AGG 0.623485 6_1:-100612720 Msa0902360:CDS
CACCTCCTCAGGAACCACAT+AGG 0.624978 6_1:+100612715 None:intergenic
CGCACTTAGATGGGTCAGAG+AGG 0.625042 6_1:-100618511 Msa0902360:intron
ATTGAAGTTCAAGATTCCAA+GGG 0.625316 6_1:-100615653 Msa0902360:CDS
ATTCCTAAGATTTATGCACA+GGG 0.625437 6_1:+100614084 None:intergenic
TTAGGTAAGATGTTCACTGA+AGG 0.629124 6_1:-100618546 Msa0902360:exon
AATGGAGAACTTTCTAGTGA+GGG 0.631445 6_1:-100616506 Msa0902360:CDS
GAAACACTTACTGGAAGACA+AGG 0.633456 6_1:-100617864 Msa0902360:CDS
GAACTTTGCTCTCAGCATCA+CGG 0.635566 6_1:+100612470 None:intergenic
AGTGGAATGAAAAGTGGCGG+CGG 0.636709 6_1:-100618173 Msa0902360:CDS
TCAAGATTCAAAGGAAACAG+TGG 0.637389 6_1:-100611942 Msa0902360:CDS
ATCTCTTAGCAGCACCATTG+GGG 0.638124 6_1:+100617961 None:intergenic
AGGGATAAGTTAGAGAACCA+TGG 0.640988 6_1:-100617144 Msa0902360:CDS
CTGAGATTTATACGAAGCTG+AGG 0.642228 6_1:-100615113 Msa0902360:intron
CGAGTCGTGCAAATTAGACA+AGG 0.642662 6_1:-100613326 Msa0902360:intron
AGAACTGCTACTGGTTCAGA+GGG 0.643693 6_1:-100616936 Msa0902360:CDS
ACTGGTGATGATGGACCTGT+CGG 0.643984 6_1:+100613609 None:intergenic
TGCGATACAAGAGAAAGACA+TGG 0.645035 6_1:-100611336 Msa0902360:CDS
TCGACTACTAGGAGAGACCA+AGG 0.647615 6_1:-100614521 Msa0902360:CDS
GATGACATGCTACATCCAGT+AGG 0.652898 6_1:+100616323 None:intergenic
GCATGAAATGTTGGAAGGCG+AGG 0.653114 6_1:+100616888 None:intergenic
GGAGACAGTTGCATATGACC+TGG 0.654916 6_1:-100615241 Msa0902360:CDS
AGTCTGACAAAGTACGCTGG+TGG 0.654966 6_1:-100615487 Msa0902360:CDS
TAAGCGGTAGACATGGTCAA+AGG 0.655113 6_1:+100614121 None:intergenic
AACTTCCTTGAGCCACCAAG+AGG 0.658392 6_1:-100614883 Msa0902360:intron
GGTGATGATGGACCTGTCGG+TGG 0.659135 6_1:+100613612 None:intergenic
TAGAAGTTGTTGCATCTGTG+AGG 0.659849 6_1:+100611364 None:intergenic
TAAAGACGCTCCTAATCACA+AGG 0.660476 6_1:-100611273 Msa0902360:CDS
TGGAAGGTTATCTGATGACG+AGG 0.662168 6_1:-100617301 Msa0902360:CDS
ATTGGCAAGATGAAGGTGCA+AGG 0.662707 6_1:-100616458 Msa0902360:intron
TGACATGTATGAGCGGCTGA+AGG 0.662731 6_1:-100613125 Msa0902360:CDS
ACCTTGCATGAAATGTTGGA+AGG 0.664073 6_1:+100616883 None:intergenic
CGGTGGACAAGATATGAGGA+AGG 0.664141 6_1:+100613629 None:intergenic
AAGGCAATCTGCTGTTGGTG+TGG 0.664226 6_1:+100614956 None:intergenic
ACATGCTACATCCAGTAGGA+GGG 0.666417 6_1:+100616327 None:intergenic
CAGTACGCAAAGTCAAAGTG+GGG 0.672704 6_1:-100616355 Msa0902360:CDS
TGGGCGTGTTCTTGTCCAAG+TGG 0.675367 6_1:-100615621 Msa0902360:CDS
CCAAGGTATATTCTGGCCAG+CGG 0.676002 6_1:+100613071 None:intergenic
ATTAGTGGAATGAAAAGTGG+CGG 0.676114 6_1:-100618176 Msa0902360:CDS
AACAGTCTGACAAAGTACGC+TGG 0.679236 6_1:-100615490 Msa0902360:intron
TGGAAGACAAGGAATGACGA+GGG 0.680604 6_1:-100617853 Msa0902360:CDS
GTGAATCAGAAACCGTAATG+GGG 0.680830 6_1:+100618748 None:intergenic
GTTGCAGTGTGGTTCTGTAG+CGG 0.681208 6_1:-100615262 Msa0902360:intron
TATGCAATTACTGCATACCA+TGG 0.685741 6_1:+100616762 None:intergenic
GCAGGGCTTATATGTCAGCA+GGG 0.687674 6_1:-100617698 Msa0902360:CDS
GCGGTTGAGACATTCGATAG+CGG 0.689985 6_1:-100618077 Msa0902360:CDS
CCACCATCAAAATTTAGGAG+TGG 0.694173 6_1:-100618131 Msa0902360:CDS
CAAGACAACAGAGTCCCCAA+TGG 0.694596 6_1:-100617975 Msa0902360:CDS
ATGGTATAAAGGTTCAAGGG+TGG 0.698357 6_1:-100611642 Msa0902360:CDS
TTGTTGATGACATGTATGAG+CGG 0.713232 6_1:-100613132 Msa0902360:CDS
TGAAATGTTGGAAGGCGAGG+TGG 0.713600 6_1:+100616891 None:intergenic
TGAGTAGAACCACAAAATGG+GGG 0.718280 6_1:+100617258 None:intergenic
TCACTCGCATACCGAGACCG+TGG 0.723475 6_1:+100617918 None:intergenic
GGCACCTAGATGCATCATGG+AGG 0.732994 6_1:-100611312 Msa0902360:CDS
TAATAAGTTACCTGTCTCGG+CGG 0.736229 6_1:-100618096 Msa0902360:CDS
AGAGATAAGACAAACTAACG+AGG 0.762301 6_1:-100617235 Msa0902360:CDS
GATACAAGAGAAAGACATGG+AGG 0.786579 6_1:-100611333 Msa0902360:CDS
AAGGCAGAATGGTTTCACTG+AGG 0.797068 6_1:-100617802 Msa0902360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTATGAAAAATTATT+GGG + chr6_1:100612208-100612227 None:intergenic 10.0%
!!! AATTTTGTATGAAAAATTAT+TGG + chr6_1:100612209-100612228 None:intergenic 10.0%
!! TATTATTACAATTTACTAAT+TGG - chr6_1:100615550-100615569 Msa0902360:intron 10.0%
!! GATTATATAAATACTTAAAT+TGG + chr6_1:100615961-100615980 None:intergenic 10.0%
!!! ATACAAAATTTTCTCAATTT+TGG - chr6_1:100612219-100612238 Msa0902360:intron 15.0%
!! AAACTTATACAATTGAAAAA+TGG + chr6_1:100613900-100613919 None:intergenic 15.0%
!! ATAAAATAACTTACAACATA+TGG + chr6_1:100614048-100614067 None:intergenic 15.0%
!! AAATGCAATAAAAATATTAC+CGG + chr6_1:100614240-100614259 None:intergenic 15.0%
!! AGACAATAAAATGATATATT+AGG + chr6_1:100614531-100614550 None:intergenic 15.0%
!! TAATAAATTAATATTTCAGC+AGG + chr6_1:100614755-100614774 None:intergenic 15.0%
!!! CTTTAAAAATATAATGAAAG+TGG + chr6_1:100615015-100615034 None:intergenic 15.0%
!!! ATTTTTTGTCTTATCTAATA+CGG - chr6_1:100615250-100615269 Msa0902360:CDS 15.0%
!!! ACTCTTTTTCTATATTATAA+TGG - chr6_1:100616516-100616535 Msa0902360:CDS 15.0%
!!! CTCTTTTTCTATATTATAAT+GGG - chr6_1:100616517-100616536 Msa0902360:CDS 15.0%
!!! TTATATATTTCTTATTTGAC+AGG - chr6_1:100618113-100618132 Msa0902360:CDS 15.0%
!!! AATATATAGTTTTACTAGAT+TGG - chr6_1:100618808-100618827 Msa0902360:five_prime_UTR 15.0%
!!! TAATTTATTCTTCATTTTGA+TGG - chr6_1:100618869-100618888 Msa0902360:five_prime_UTR 15.0%
!! TTGCATAAAACATGAAAAAA+CGG + chr6_1:100611352-100611371 None:intergenic 20.0%
!!! TTTTTCATGTTTTATGCAAA+TGG - chr6_1:100611353-100611372 Msa0902360:CDS 20.0%
!!! TTTTCATGTTTTATGCAAAT+GGG - chr6_1:100611354-100611373 Msa0902360:CDS 20.0%
!!! ATATACCAATGTAGTTATTT+TGG + chr6_1:100611523-100611542 None:intergenic 20.0%
!! TATATTAGCATATATGCTTA+AGG + chr6_1:100613006-100613025 None:intergenic 20.0%
!! AGTGACACATAAAATTAAAA+TGG - chr6_1:100613521-100613540 Msa0902360:intron 20.0%
!!! ATATCATTTTATTGTCTTTG+TGG - chr6_1:100614534-100614553 Msa0902360:intron 20.0%
!! TAAAAATCGTATGTTGTATA+TGG + chr6_1:100615199-100615218 None:intergenic 20.0%
!! TTAACAACTAATATTATCTC+AGG - chr6_1:100615591-100615610 Msa0902360:intron 20.0%
!! ATAATCAAAATATACTTCCT+AGG - chr6_1:100615782-100615801 Msa0902360:intron 20.0%
!!! TTTCTTTTCTCAAACATATA+AGG - chr6_1:100615809-100615828 Msa0902360:CDS 20.0%
!!! TATTGTTAATGGTTCTAATA+TGG - chr6_1:100616079-100616098 Msa0902360:CDS 20.0%
!! ATTCTTCGATTACATAATTA+GGG + chr6_1:100616338-100616357 None:intergenic 20.0%
!! AATTCTTCGATTACATAATT+AGG + chr6_1:100616339-100616358 None:intergenic 20.0%
!!! TATTATAATGGGTTTTTTGA+AGG - chr6_1:100616528-100616547 Msa0902360:CDS 20.0%
!! GATAGTAAGAAAATAGAATT+TGG + chr6_1:100616844-100616863 None:intergenic 20.0%
!!! GAAAAAAAAAGATCTTCTTT+TGG - chr6_1:100617143-100617162 Msa0902360:CDS 20.0%
!! AATTTAATATTTGATACCCT+TGG - chr6_1:100617443-100617462 Msa0902360:intron 20.0%
!!! TTTAGATGTAATGAGTTTTA+TGG - chr6_1:100618081-100618100 Msa0902360:CDS 20.0%
!! AATACACATGTAAATAAAGA+GGG - chr6_1:100618598-100618617 Msa0902360:five_prime_UTR 20.0%
!! TAAATAAAGAGGGTTATTAA+GGG - chr6_1:100618608-100618627 Msa0902360:five_prime_UTR 20.0%
!! ATGATAATCAATCAATCATA+TGG - chr6_1:100618640-100618659 Msa0902360:five_prime_UTR 20.0%
!! TGATAATCAATCAATCATAT+GGG - chr6_1:100618641-100618660 Msa0902360:five_prime_UTR 20.0%
!! TGTTATTCATTGTAATACTT+TGG - chr6_1:100618781-100618800 Msa0902360:five_prime_UTR 20.0%
!!! GTTTTTTTTTTATCTGTGTG+TGG - chr6_1:100610944-100610963 Msa0902360:three_prime_UTR 25.0%
! TCTCTAAGCTTAATATCAAA+GGG - chr6_1:100610992-100611011 Msa0902360:three_prime_UTR 25.0%
! ATTTGAGAGAGAGAAAAAAA+GGG + chr6_1:100611044-100611063 None:intergenic 25.0%
!!! AATGAAATTTTGAGGGTTTT+TGG + chr6_1:100611128-100611147 None:intergenic 25.0%
!! AAACGTGAATGAAATTTTGA+GGG + chr6_1:100611135-100611154 None:intergenic 25.0%
!! TAAACGTGAATGAAATTTTG+AGG + chr6_1:100611136-100611155 None:intergenic 25.0%
! TGCATAAAGCTTAATTCTTT+AGG - chr6_1:100611200-100611219 Msa0902360:three_prime_UTR 25.0%
!! AGCTTAATTCTTTAGGTTTA+AGG - chr6_1:100611207-100611226 Msa0902360:three_prime_UTR 25.0%
!! TAGGTTTAAGGTTTCAAAAT+TGG - chr6_1:100611219-100611238 Msa0902360:three_prime_UTR 25.0%
! TCGCAACTTTACAAATAATA+AGG + chr6_1:100611394-100611413 None:intergenic 25.0%
! GTGTTTGATTGTTAATTAGA+AGG - chr6_1:100611578-100611597 Msa0902360:intron 25.0%
! TATTTGAATGTAACTACATG+TGG + chr6_1:100612360-100612379 None:intergenic 25.0%
! TGCATGTTTATGTATAAAGA+AGG + chr6_1:100612776-100612795 None:intergenic 25.0%
!! CATTCATTTTCCAAAAACAT+TGG + chr6_1:100613137-100613156 None:intergenic 25.0%
! TAAATTACATGAACACTTGA+AGG + chr6_1:100613225-100613244 None:intergenic 25.0%
!!! CCAATAAGTTTTTTCAGTTT+AGG + chr6_1:100613345-100613364 None:intergenic 25.0%
! CCTAAACTGAAAAAACTTAT+TGG - chr6_1:100613342-100613361 Msa0902360:CDS 25.0%
!! TTTTTATTATCCATGCCTTA+AGG - chr6_1:100613807-100613826 Msa0902360:intron 25.0%
!! TTTTATTATCCATGCCTTAA+GGG - chr6_1:100613808-100613827 Msa0902360:intron 25.0%
! AATATAATTCACCATTATGC+TGG - chr6_1:100614081-100614100 Msa0902360:CDS 25.0%
! AATATATTCAACCAGCATAA+TGG + chr6_1:100614095-100614114 None:intergenic 25.0%
! ATGTATTATGCATTTGCTTT+AGG - chr6_1:100614476-100614495 Msa0902360:CDS 25.0%
! GGATTAACAGTTTAATTAAG+TGG + chr6_1:100615168-100615187 None:intergenic 25.0%
!!! TACAACATACGATTTTTAGT+TGG - chr6_1:100615201-100615220 Msa0902360:CDS 25.0%
! TTATCTAATACGGTTCAATT+CGG - chr6_1:100615260-100615279 Msa0902360:intron 25.0%
! GCAGTTCATAATTAAGAATT+CGG - chr6_1:100615841-100615860 Msa0902360:CDS 25.0%
! AAGTAAGAACATGTGATAAT+AGG - chr6_1:100615987-100616006 Msa0902360:intron 25.0%
! ACTTTCACATGTTACAAATA+AGG + chr6_1:100616030-100616049 None:intergenic 25.0%
! CAAGCTACTATTATTGTTAA+TGG - chr6_1:100616068-100616087 Msa0902360:intron 25.0%
!! TGAAAGATCTCTTTGAAAAT+CGG + chr6_1:100616258-100616277 None:intergenic 25.0%
!!! ACTAATTTTAGTATGTGACT+AGG - chr6_1:100616305-100616324 Msa0902360:CDS 25.0%
! TCCATTTGTATATTCTTGTT+TGG - chr6_1:100616443-100616462 Msa0902360:intron 25.0%
! TCCAAACAAGAATATACAAA+TGG + chr6_1:100616447-100616466 None:intergenic 25.0%
!! CTTTTAAACTAATCATGTGT+TGG - chr6_1:100616554-100616573 Msa0902360:CDS 25.0%
! TACAAGACAATATATCACTT+AGG + chr6_1:100616589-100616608 None:intergenic 25.0%
! CTGAAAAAATAAATGATGAC+AGG - chr6_1:100616939-100616958 Msa0902360:intron 25.0%
! TATTTAAGCCCAAATTTCTT+AGG + chr6_1:100617051-100617070 None:intergenic 25.0%
! CTTACAATAACCTTTACATT+GGG + chr6_1:100617610-100617629 None:intergenic 25.0%
! CAATGTAAAGGTTATTGTAA+GGG - chr6_1:100617609-100617628 Msa0902360:intron 25.0%
! GCTACTAATGCTATTAAATT+TGG - chr6_1:100617674-100617693 Msa0902360:CDS 25.0%
! GATTAATTTACTAACTATGC+TGG + chr6_1:100617772-100617791 None:intergenic 25.0%
! ACATCTAAAAAGATACTACA+TGG + chr6_1:100618070-100618089 None:intergenic 25.0%
! TTTATTATGTGTGCAATACA+AGG - chr6_1:100618243-100618262 Msa0902360:intron 25.0%
! CAATACACATGTAAATAAAG+AGG - chr6_1:100618597-100618616 Msa0902360:five_prime_UTR 25.0%
! GTAAATAAAGAGGGTTATTA+AGG - chr6_1:100618607-100618626 Msa0902360:five_prime_UTR 25.0%
! AAATAAAGAGGGTTATTAAG+GGG - chr6_1:100618609-100618628 Msa0902360:five_prime_UTR 25.0%
! ATTCATTGTAATACTTTGGT+AGG - chr6_1:100618785-100618804 Msa0902360:five_prime_UTR 25.0%
CTCTCTAAGCTTAATATCAA+AGG - chr6_1:100610991-100611010 Msa0902360:three_prime_UTR 30.0%
GTTTACTTGCTTAATCAGAA+AGG + chr6_1:100611022-100611041 None:intergenic 30.0%
GATTTGAGAGAGAGAAAAAA+AGG + chr6_1:100611045-100611064 None:intergenic 30.0%
TTCTGCCAAAATAACTACAT+TGG - chr6_1:100611515-100611534 Msa0902360:intron 30.0%
! AATTTTCTACCACACAAGTA+GGG - chr6_1:100612069-100612088 Msa0902360:intron 30.0%
TCACTTTCACACATTGTTAT+TGG - chr6_1:100612382-100612401 Msa0902360:intron 30.0%
ATAGCACAAATCACAAAGTT+AGG + chr6_1:100612483-100612502 None:intergenic 30.0%
! GTACTTGATTCTGCTTTATT+TGG + chr6_1:100612638-100612657 None:intergenic 30.0%
!! TACTTTGAAATCTGTATCCA+GGG - chr6_1:100612655-100612674 Msa0902360:intron 30.0%
GTTAAGAACTCAATATTGAG+AGG + chr6_1:100612754-100612773 None:intergenic 30.0%
TCTTTACTTAGAGATGCATT+TGG - chr6_1:100613158-100613177 Msa0902360:CDS 30.0%
CTTTACTTAGAGATGCATTT+GGG - chr6_1:100613159-100613178 Msa0902360:CDS 30.0%
AAAACTTATTGGCAAGATGA+AGG - chr6_1:100613353-100613372 Msa0902360:CDS 30.0%
! AAGTTGTTACACCAACTTTT+AGG + chr6_1:100613716-100613735 None:intergenic 30.0%
TTTATTATCCATGCCTTAAG+GGG - chr6_1:100613809-100613828 Msa0902360:intron 30.0%
ATTGAAGTTCAAGATTCCAA+GGG - chr6_1:100614165-100614184 Msa0902360:CDS 30.0%
AGATGACAATAGTCATCTTA+AGG - chr6_1:100614425-100614444 Msa0902360:CDS 30.0%
! ACAGAGTTTGCTTCATATTA+TGG - chr6_1:100614677-100614696 Msa0902360:intron 30.0%
TAGATATCTATCGTATGTCA+TGG - chr6_1:100614833-100614852 Msa0902360:intron 30.0%
GCAGATTATATACCAAGTTA+AGG + chr6_1:100614884-100614903 None:intergenic 30.0%
TTAAACTGTTAATCCAAGCA+TGG - chr6_1:100615173-100615192 Msa0902360:CDS 30.0%
! ACTAATATTATCTCAGGTTG+CGG - chr6_1:100615597-100615616 Msa0902360:intron 30.0%
TATATTCATCTGTGTCAGAA+AGG + chr6_1:100615645-100615664 None:intergenic 30.0%
GAATAATGAAAGCTGTTTGA+TGG - chr6_1:100615672-100615691 Msa0902360:CDS 30.0%
ATTCCTAAGATTTATGCACA+GGG + chr6_1:100615737-100615756 None:intergenic 30.0%
TTGAGAAAAGAAAGATACCT+AGG + chr6_1:100615802-100615821 None:intergenic 30.0%
TATATGGAAGCAGAAAGATT+TGG + chr6_1:100616140-100616159 None:intergenic 30.0%
! GATTTTCAAAGAGATCTTTC+AGG - chr6_1:100616257-100616276 Msa0902360:CDS 30.0%
!!! TCTAAATGCTTTGCTTTTTC+AGG - chr6_1:100616621-100616640 Msa0902360:intron 30.0%
TCATACATGTCATCAACAAA+GGG + chr6_1:100616685-100616704 None:intergenic 30.0%
!!! ACATACATTTTCTAGAACCA+AGG + chr6_1:100616767-100616786 None:intergenic 30.0%
AAAAAGAAAAATGCAGGATG+AGG + chr6_1:100616801-100616820 None:intergenic 30.0%
AATGGGAAAAAGAAAAATGC+AGG + chr6_1:100616807-100616826 None:intergenic 30.0%
! TGGCAACATCTAAAACAAAT+GGG + chr6_1:100616824-100616843 None:intergenic 30.0%
! TTGGCAACATCTAAAACAAA+TGG + chr6_1:100616825-100616844 None:intergenic 30.0%
GAAGAATACAAGTTTAACTC+TGG - chr6_1:100616905-100616924 Msa0902360:CDS 30.0%
!! AGCTTTAGATAAACAGTATG+CGG - chr6_1:100616993-100617012 Msa0902360:intron 30.0%
! TTCTTTTGAATTCCTTGAAG+AGG - chr6_1:100617219-100617238 Msa0902360:CDS 30.0%
TTGAATCACAGTTCAAATCA+TGG - chr6_1:100617267-100617286 Msa0902360:CDS 30.0%
TGAATCACAGTTCAAATCAT+GGG - chr6_1:100617268-100617287 Msa0902360:CDS 30.0%
!! TATTCTGAAACCCAATGTAA+AGG - chr6_1:100617597-100617616 Msa0902360:intron 30.0%
CCTTACAATAACCTTTACAT+TGG + chr6_1:100617611-100617630 None:intergenic 30.0%
CCAATGTAAAGGTTATTGTA+AGG - chr6_1:100617608-100617627 Msa0902360:intron 30.0%
TAATAGCATTAGTAGCAATG+TGG + chr6_1:100617670-100617689 None:intergenic 30.0%
GAAGATTCTTCAAGATTCAA+AGG - chr6_1:100617867-100617886 Msa0902360:CDS 30.0%
AATACTGTGAAGATAGCTTA+TGG + chr6_1:100617956-100617975 None:intergenic 30.0%
! CAGGTAACTTAATTTTCTTC+TGG - chr6_1:100618030-100618049 Msa0902360:CDS 30.0%
TAAAAAGATACTACATGGCA+AGG + chr6_1:100618065-100618084 None:intergenic 30.0%
!!! ACAGGAAATTTTGAGTTTCT+TGG - chr6_1:100618131-100618150 Msa0902360:CDS 30.0%
ACAGAAAAGAGAATAGATCA+TGG - chr6_1:100618157-100618176 Msa0902360:CDS 30.0%
GAGAATAGATCATGGTATAA+AGG - chr6_1:100618165-100618184 Msa0902360:CDS 30.0%
ATCATGGTATAAAGGTTCAA+GGG - chr6_1:100618173-100618192 Msa0902360:CDS 30.0%
AACCTCTGCTTAATTACTTA+AGG - chr6_1:100618216-100618235 Msa0902360:CDS 30.0%
AGCATATTAATCTTGTTCCT+AGG + chr6_1:100618707-100618726 None:intergenic 30.0%
TTAATATGCTCTTCACTTAC+TGG - chr6_1:100618717-100618736 Msa0902360:five_prime_UTR 30.0%
TAATATGCTCTTCACTTACT+GGG - chr6_1:100618718-100618737 Msa0902360:five_prime_UTR 30.0%
TGTGAATCAGAAACCGTAAT+GGG + chr6_1:100611074-100611093 None:intergenic 35.0%
!! ATTCAGAGGTTGGTTCTATT+AGG - chr6_1:100611254-100611273 Msa0902360:CDS 35.0%
TTAGGTAAGATGTTCACTGA+AGG - chr6_1:100611272-100611291 Msa0902360:CDS 35.0%
TTGACAAAAACGCACTTAGA+TGG - chr6_1:100611297-100611316 Msa0902360:CDS 35.0%
TGACAAAAACGCACTTAGAT+GGG - chr6_1:100611298-100611317 Msa0902360:CDS 35.0%
!! CCACTTTTCATTCCACTAAT+CGG + chr6_1:100611642-100611661 None:intergenic 35.0%
ATTAGTGGAATGAAAAGTGG+CGG - chr6_1:100611642-100611661 Msa0902360:CDS 35.0%
TACCACCACCATCAAAATTT+AGG - chr6_1:100611682-100611701 Msa0902360:CDS 35.0%
! TGACCACTCCTAAATTTTGA+TGG + chr6_1:100611693-100611712 None:intergenic 35.0%
TGCTAATAAGTTACCTGTCT+CGG - chr6_1:100611719-100611738 Msa0902360:intron 35.0%
TAGCGGTTCAAATAGTGATA+TGG - chr6_1:100611758-100611777 Msa0902360:intron 35.0%
!! TTATGGTGGAAGGTATTCTT+TGG - chr6_1:100611809-100611828 Msa0902360:CDS 35.0%
! GAATTTTCTACCACACAAGT+AGG - chr6_1:100612068-100612087 Msa0902360:intron 35.0%
CTTTGAACATTCATCCTTGA+AGG + chr6_1:100612161-100612180 None:intergenic 35.0%
TGTTCAAAGTTCTGCAGAAA+AGG - chr6_1:100612172-100612191 Msa0902360:intron 35.0%
GAATGAAATACTACGTAGCA+CGG - chr6_1:100612278-100612297 Msa0902360:intron 35.0%
GATATTTCACCTATGAAGCA+CGG + chr6_1:100612446-100612465 None:intergenic 35.0%
GCTTCATAGGTGAAATATCT+TGG - chr6_1:100612447-100612466 Msa0902360:CDS 35.0%
! TGCTATGAGAATTTTCAGAG+TGG - chr6_1:100612497-100612516 Msa0902360:CDS 35.0%
! ATGAGAATTTTCAGAGTGGA+AGG - chr6_1:100612501-100612520 Msa0902360:CDS 35.0%
TTGAGTAGAACCACAAAATG+GGG + chr6_1:100612564-100612583 None:intergenic 35.0%
CTTGAGTAGAACCACAAAAT+GGG + chr6_1:100612565-100612584 None:intergenic 35.0%
TCTTGAGTAGAACCACAAAA+TGG + chr6_1:100612566-100612585 None:intergenic 35.0%
AGAGATAAGACAAACTAACG+AGG - chr6_1:100612583-100612602 Msa0902360:CDS 35.0%
!! GTACTTTGAAATCTGTATCC+AGG - chr6_1:100612654-100612673 Msa0902360:intron 35.0%
TGATACCTTGCATGAAATGT+TGG + chr6_1:100612942-100612961 None:intergenic 35.0%
! TGAATTCTTTTCAGTGCTCT+TGG - chr6_1:100613032-100613051 Msa0902360:intron 35.0%
! GAATTCTTTTCAGTGCTCTT+GGG - chr6_1:100613033-100613052 Msa0902360:intron 35.0%
TATGCAATTACTGCATACCA+TGG + chr6_1:100613059-100613078 None:intergenic 35.0%
! TATGGAAGCTCCAATGTTTT+TGG - chr6_1:100613124-100613143 Msa0902360:CDS 35.0%
! AATGGAGAACTTTCTAGTGA+GGG - chr6_1:100613312-100613331 Msa0902360:intron 35.0%
ATGTCACAAAAGACTCACTA+TGG + chr6_1:100613431-100613450 None:intergenic 35.0%
TTGACTGCAAATTTGAGAAG+TGG + chr6_1:100613560-100613579 None:intergenic 35.0%
TTGCAGTCAAAACTATCTTC+TGG - chr6_1:100613570-100613589 Msa0902360:CDS 35.0%
AGTCAAAACTATCTTCTGGT+TGG - chr6_1:100613574-100613593 Msa0902360:CDS 35.0%
!! AAGTTGGTGTAACAACTTTG+CGG - chr6_1:100613718-100613737 Msa0902360:intron 35.0%
! TTCCAACATTTTTCCCCTTA+AGG + chr6_1:100613825-100613844 None:intergenic 35.0%
ATGTCTCTGATGATATACAC+AGG + chr6_1:100613952-100613971 None:intergenic 35.0%
TTACAACATATGGACTTCAC+TGG + chr6_1:100614038-100614057 None:intergenic 35.0%
! TACAGTTTTCCAGATAGTCT+TGG - chr6_1:100614129-100614148 Msa0902360:CDS 35.0%
AAATCATCTCCAAGACTATC+TGG + chr6_1:100614141-100614160 None:intergenic 35.0%
CATTGAAGTTCAAGATTCCA+AGG - chr6_1:100614164-100614183 Msa0902360:CDS 35.0%
!!! ATTCCAAGGGAAAGCATTTT+GGG - chr6_1:100614178-100614197 Msa0902360:CDS 35.0%
AGAAGTTGCAATGAAAGTTC+AGG - chr6_1:100614604-100614623 Msa0902360:intron 35.0%
GAAGTTGCAATGAAAGTTCA+GGG - chr6_1:100614605-100614624 Msa0902360:intron 35.0%
CAAAGGAACCTAGAATTACA+TGG - chr6_1:100614635-100614654 Msa0902360:intron 35.0%
AATTACATGGTCCATGGAAA+TGG - chr6_1:100614648-100614667 Msa0902360:intron 35.0%
CTATTTCCCTTCATGATAAC+AGG + chr6_1:100614912-100614931 None:intergenic 35.0%
TCTTATCAGAATCGACTACT+AGG - chr6_1:100615286-100615305 Msa0902360:intron 35.0%
TATCTGTTCAATTTCGTCCT+TGG + chr6_1:100615317-100615336 None:intergenic 35.0%
AGCTTGTAAAGTTTAACAGC+CGG + chr6_1:100615445-100615464 None:intergenic 35.0%
TCATGATATCTTATCTCCTG+AGG - chr6_1:100615468-100615487 Msa0902360:CDS 35.0%
AAACCCTGTGCATAAATCTT+AGG - chr6_1:100615731-100615750 Msa0902360:intron 35.0%
CATTCCTAAGATTTATGCAC+AGG + chr6_1:100615738-100615757 None:intergenic 35.0%
!! GTTAATGGTTCTAATATGGC+TGG - chr6_1:100616083-100616102 Msa0902360:CDS 35.0%
TTCCTTCTTAGTCCTATCAA+AGG - chr6_1:100616397-100616416 Msa0902360:intron 35.0%
GCAAAGATAGACGTTTATCT+TGG + chr6_1:100616471-100616490 None:intergenic 35.0%
!!! CTTTGCTTTTTCAGGTGAAA+TGG - chr6_1:100616629-100616648 Msa0902360:intron 35.0%
CTCATACATGTCATCAACAA+AGG + chr6_1:100616686-100616705 None:intergenic 35.0%
!! TTGTTGATGACATGTATGAG+CGG - chr6_1:100616686-100616705 Msa0902360:CDS 35.0%
! TCTAGAACCAAGGTATATTC+TGG + chr6_1:100616757-100616776 None:intergenic 35.0%
! AACTTATGTCACCTTTTGTC+AGG - chr6_1:100617190-100617209 Msa0902360:CDS 35.0%
AAGAATTCCAACCTGACAAA+AGG + chr6_1:100617204-100617223 None:intergenic 35.0%
TTGAACTGTGATTCAATCCT+TGG + chr6_1:100617263-100617282 None:intergenic 35.0%
TTTGACAACATTGATGTGCT+TGG + chr6_1:100617482-100617501 None:intergenic 35.0%
GACGAACATAGTAACTTAAC+AGG + chr6_1:100617703-100617722 None:intergenic 35.0%
TCAAGATTCAAAGGAAACAG+TGG - chr6_1:100617876-100617895 Msa0902360:CDS 35.0%
ATTAAGTTACCTGTCCCATT+CGG + chr6_1:100618023-100618042 None:intergenic 35.0%
GATCATGGTATAAAGGTTCA+AGG - chr6_1:100618172-100618191 Msa0902360:CDS 35.0%
GACCTTAAGTAATTAAGCAG+AGG + chr6_1:100618221-100618240 None:intergenic 35.0%
! TTTTCTTACAGCCCATAATC+CGG + chr6_1:100618374-100618393 None:intergenic 35.0%
AAACTGTTGTCCTTGTGATT+AGG + chr6_1:100618558-100618577 None:intergenic 35.0%
TCAAATCTCGAACCCCATTA+CGG - chr6_1:100611058-100611077 Msa0902360:three_prime_UTR 40.0%
GTGAATCAGAAACCGTAATG+GGG + chr6_1:100611073-100611092 None:intergenic 40.0%
GTGTGAATCAGAAACCGTAA+TGG + chr6_1:100611075-100611094 None:intergenic 40.0%
GTTTCTGATTCACACTTCTG+TGG - chr6_1:100611080-100611099 Msa0902360:three_prime_UTR 40.0%
! GGTAGTGCATTTTCATTCAG+AGG - chr6_1:100611240-100611259 Msa0902360:exon 40.0%
! GTGCATTTTCATTCAGAGGT+TGG - chr6_1:100611244-100611263 Msa0902360:exon 40.0%
CTCATAGCTGTGTTTGAGAA+TGG + chr6_1:100611609-100611628 None:intergenic 40.0%
CCGATTAGTGGAATGAAAAG+TGG - chr6_1:100611639-100611658 Msa0902360:CDS 40.0%
!!! CTCCTAAATTTTGATGGTGG+TGG + chr6_1:100611687-100611706 None:intergenic 40.0%
!! CCACTCCTAAATTTTGATGG+TGG + chr6_1:100611690-100611709 None:intergenic 40.0%
CCACCATCAAAATTTAGGAG+TGG - chr6_1:100611687-100611706 Msa0902360:intron 40.0%
GAGACAGGTAACTTATTAGC+AGG + chr6_1:100611720-100611739 None:intergenic 40.0%
TAATAAGTTACCTGTCTCGG+CGG - chr6_1:100611722-100611741 Msa0902360:intron 40.0%
GATTCGGAAGAGGAAGTTTA+TGG - chr6_1:100611792-100611811 Msa0902360:intron 40.0%
! AAGAGGAAGTTTATGGTGGA+AGG - chr6_1:100611799-100611818 Msa0902360:intron 40.0%
TATCTCTTAGCAGCACCATT+GGG + chr6_1:100611861-100611880 None:intergenic 40.0%
ATATCTCTTAGCAGCACCAT+TGG + chr6_1:100611862-100611881 None:intergenic 40.0%
!! AATGGTGCTGCTAAGAGATA+TGG - chr6_1:100611861-100611880 Msa0902360:CDS 40.0%
!! ATGGTGCTGCTAAGAGATAT+GGG - chr6_1:100611862-100611881 Msa0902360:CDS 40.0%
TCTTCCAGTAAGTGTTTCTC+TGG + chr6_1:100611952-100611971 None:intergenic 40.0%
GAAACACTTACTGGAAGACA+AGG - chr6_1:100611954-100611973 Msa0902360:CDS 40.0%
TTTCACTGAGGATGATTCGT+CGG - chr6_1:100612028-100612047 Msa0902360:intron 40.0%
CAAGTAGGGAGTAGTATCAA+TGG - chr6_1:100612083-100612102 Msa0902360:intron 40.0%
!! GACATATAAGCCCTGCTTTT+TGG + chr6_1:100612116-100612135 None:intergenic 40.0%
ATGCTTCTAGTGTACCTTCA+AGG - chr6_1:100612144-100612163 Msa0902360:intron 40.0%
! TTGCTAGCTACTGCTTCTTT+TGG - chr6_1:100612253-100612272 Msa0902360:intron 40.0%
! TGCTAGCTACTGCTTCTTTT+GGG - chr6_1:100612254-100612273 Msa0902360:intron 40.0%
TGAGTAGAACCACAAAATGG+GGG + chr6_1:100612563-100612582 None:intergenic 40.0%
ATGGTTCTCTAACTTATCCC+TGG + chr6_1:100612675-100612694 None:intergenic 40.0%
AGGGATAAGTTAGAGAACCA+TGG - chr6_1:100612674-100612693 Msa0902360:intron 40.0%
CAAGCTCGGAAAAATTCGTT+AGG - chr6_1:100612702-100612721 Msa0902360:intron 40.0%
ACCTTGCATGAAATGTTGGA+AGG + chr6_1:100612938-100612957 None:intergenic 40.0%
GAGCTAATGGTGAAATGCAA+TGG - chr6_1:100613294-100613313 Msa0902360:intron 40.0%
! CAATGGAGAACTTTCTAGTG+AGG - chr6_1:100613311-100613330 Msa0902360:intron 40.0%
TTCCCTGACACATAAAAGCT+TGG - chr6_1:100613644-100613663 Msa0902360:CDS 40.0%
! TGCCAAGCTTTTATGTGTCA+GGG + chr6_1:100613649-100613668 None:intergenic 40.0%
! ATGCCAAGCTTTTATGTGTC+AGG + chr6_1:100613650-100613669 None:intergenic 40.0%
CGCTATATACAACAAGTCTC+TGG - chr6_1:100613687-100613706 Msa0902360:CDS 40.0%
TATGAAGCTGTGCAAGGTAT+GGG - chr6_1:100613756-100613775 Msa0902360:intron 40.0%
! ACATTTTTCCCCTTAAGGCA+TGG + chr6_1:100613820-100613839 None:intergenic 40.0%
TGCCTTAAGGGGAAAAATGT+TGG - chr6_1:100613820-100613839 Msa0902360:intron 40.0%
TAGTTGAAGAAGACGCCATT+AGG - chr6_1:100613999-100614018 Msa0902360:intron 40.0%
!!! GATTCCAAGGGAAAGCATTT+TGG - chr6_1:100614177-100614196 Msa0902360:CDS 40.0%
!! TTTTTAGTGCCTGTGTTGAG+AGG - chr6_1:100614271-100614290 Msa0902360:intron 40.0%
TAATGATCACCTCTCAACAC+AGG + chr6_1:100614283-100614302 None:intergenic 40.0%
ATGACTATTGTCATCTGCAC+TGG + chr6_1:100614421-100614440 None:intergenic 40.0%
!! TCATTGCAACTTCTAGAACC+AGG + chr6_1:100614598-100614617 None:intergenic 40.0%
ACCTAGAATTACATGGTCCA+TGG - chr6_1:100614642-100614661 Msa0902360:intron 40.0%
TCCATGGACCATGTAATTCT+AGG + chr6_1:100614646-100614665 None:intergenic 40.0%
CTGAGATTTATACGAAGCTG+AGG - chr6_1:100614705-100614724 Msa0902360:intron 40.0%
AAGTTAAGGCAATCTGCTGT+TGG + chr6_1:100614870-100614889 None:intergenic 40.0%
AACAGCAGATTGCCTTAACT+TGG - chr6_1:100614869-100614888 Msa0902360:intron 40.0%
CTTGCACCTGTTATCATGAA+GGG - chr6_1:100614903-100614922 Msa0902360:CDS 40.0%
ATGTTGTATATGGCCATGCT+TGG + chr6_1:100615189-100615208 None:intergenic 40.0%
CTTGATGAGTCATCTTTCTC+TGG - chr6_1:100615367-100615386 Msa0902360:intron 40.0%
! GTAGTGACAGAAACTGGTTT+GGG + chr6_1:100615494-100615513 None:intergenic 40.0%
AGTAGTGACAGAAACTGGTT+TGG + chr6_1:100615495-100615514 None:intergenic 40.0%
! GGTTTTCATCTTCTGGTAAG+CGG + chr6_1:100615716-100615735 None:intergenic 40.0%
TTCAAAGAGATCTTTCAGGC+TGG - chr6_1:100616261-100616280 Msa0902360:CDS 40.0%
CACCTTTGATAGGACTAAGA+AGG + chr6_1:100616402-100616421 None:intergenic 40.0%
CTTCTTAGTCCTATCAAAGG+TGG - chr6_1:100616400-100616419 Msa0902360:intron 40.0%
!!! CTTTTTCAGGTGAAATGGTC+TGG - chr6_1:100616634-100616653 Msa0902360:intron 40.0%
GGAAACATTGACAGACTATG+AGG - chr6_1:100616714-100616733 Msa0902360:CDS 40.0%
GGCAATAGCTGATATTGAGA+AGG - chr6_1:100616960-100616979 Msa0902360:intron 40.0%
TGATATTGAGAAGGCGATTG+TGG - chr6_1:100616969-100616988 Msa0902360:intron 40.0%
AGCTCCTCTTAAAGATAGCA+TGG - chr6_1:100617023-100617042 Msa0902360:intron 40.0%
AGCATGGCACCTAAGAAATT+TGG - chr6_1:100617039-100617058 Msa0902360:intron 40.0%
GCATGGCACCTAAGAAATTT+GGG - chr6_1:100617040-100617059 Msa0902360:intron 40.0%
ATGTCCAGAAACTTGCCAAA+CGG - chr6_1:100617070-100617089 Msa0902360:intron 40.0%
! TATGTCACCTTTTGTCAGGT+TGG - chr6_1:100617194-100617213 Msa0902360:CDS 40.0%
AAAGTTCAGGAACTACTTGC+AGG - chr6_1:100617364-100617383 Msa0902360:intron 40.0%
! TGGCACAACTCTTTTACCAA+GGG + chr6_1:100617462-100617481 None:intergenic 40.0%
! TTGGCACAACTCTTTTACCA+AGG + chr6_1:100617463-100617482 None:intergenic 40.0%
CTAGAAACATATGCAACCTC+TGG + chr6_1:100617646-100617665 None:intergenic 40.0%
TAGCATTCTGTAACTTCGTC+TGG + chr6_1:100617837-100617856 None:intergenic 40.0%
ATGGTATAAAGGTTCAAGGG+TGG - chr6_1:100618176-100618195 Msa0902360:CDS 40.0%
ATTTAGTCAATGTGCGCTCT+TGG - chr6_1:100618346-100618365 Msa0902360:intron 40.0%
TTTAGTCAATGTGCGCTCTT+GGG - chr6_1:100618347-100618366 Msa0902360:intron 40.0%
AACCTGCATTCATGCATACA+CGG + chr6_1:100618418-100618437 None:intergenic 40.0%
TAGAAGTTGTTGCATCTGTG+AGG + chr6_1:100618457-100618476 None:intergenic 40.0%
TCACAGATGCAACAACTTCT+AGG - chr6_1:100618456-100618475 Msa0902360:intron 40.0%
TGCGATACAAGAGAAAGACA+TGG - chr6_1:100618482-100618501 Msa0902360:intron 40.0%
GATACAAGAGAAAGACATGG+AGG - chr6_1:100618485-100618504 Msa0902360:intron 40.0%
TAAAGACGCTCCTAATCACA+AGG - chr6_1:100618545-100618564 Msa0902360:exon 40.0%
GCTTACTCCTGCTACAAAAT+TGG + chr6_1:100618672-100618691 None:intergenic 40.0%
AGATCTCGTGATCCGATTAG+TGG - chr6_1:100611627-100611646 Msa0902360:intron 45.0%
TCGGAAGAGGAAGTTTATGG+TGG - chr6_1:100611795-100611814 Msa0902360:intron 45.0%
ATCTCTTAGCAGCACCATTG+GGG + chr6_1:100611860-100611879 None:intergenic 45.0%
TCGTCCAGAGAAACACTTAC+TGG - chr6_1:100611945-100611964 Msa0902360:CDS 45.0%
TGGAAGACAAGGAATGACGA+GGG - chr6_1:100611965-100611984 Msa0902360:CDS 45.0%
TTAGCAGCACTCCTCATTAC+CGG + chr6_1:100611993-100612012 None:intergenic 45.0%
!! GTAATGAGGAGTGCTGCTAA+TGG - chr6_1:100611993-100612012 Msa0902360:intron 45.0%
AAGGCAGAATGGTTTCACTG+AGG - chr6_1:100612016-100612035 Msa0902360:intron 45.0%
GATACTACTCCCTACTTGTG+TGG + chr6_1:100612081-100612100 None:intergenic 45.0%
ATGGCACTCTTCCAAAAAGC+AGG - chr6_1:100612102-100612121 Msa0902360:intron 45.0%
TGGCACTCTTCCAAAAAGCA+GGG - chr6_1:100612103-100612122 Msa0902360:intron 45.0%
TGTCCAACACGTGTCAATGT+CGG - chr6_1:100612320-100612339 Msa0902360:intron 45.0%
! TGGAAGGTTATCTGATGACG+AGG - chr6_1:100612517-100612536 Msa0902360:CDS 45.0%
GTACTACGTGTTGCAGAAGT+TGG + chr6_1:100612614-100612633 None:intergenic 45.0%
!! AGAACTGCTACTGGTTCAGA+GGG - chr6_1:100612882-100612901 Msa0902360:intron 45.0%
GCCTTCCAACATTTCATGCA+AGG - chr6_1:100612934-100612953 Msa0902360:intron 45.0%
AGTGCTTCTTCAACCAGAAG+AGG - chr6_1:100613272-100613291 Msa0902360:intron 45.0%
TCAACCAGAAGAGGAGCTAA+TGG - chr6_1:100613281-100613300 Msa0902360:intron 45.0%
TTCACCATTAGCTCCTCTTC+TGG + chr6_1:100613288-100613307 None:intergenic 45.0%
! ATTGGCAAGATGAAGGTGCA+AGG - chr6_1:100613360-100613379 Msa0902360:CDS 45.0%
TGCAGTACGCAAAGTCAAAG+TGG - chr6_1:100613461-100613480 Msa0902360:intron 45.0%
GCAGTACGCAAAGTCAAAGT+GGG - chr6_1:100613462-100613481 Msa0902360:intron 45.0%
CAGTACGCAAAGTCAAAGTG+GGG - chr6_1:100613463-100613482 Msa0902360:intron 45.0%
ACATGCTACATCCAGTAGGA+GGG + chr6_1:100613494-100613513 None:intergenic 45.0%
GATGACATGCTACATCCAGT+AGG + chr6_1:100613498-100613517 None:intergenic 45.0%
GTACCACATTTGCCTGCAAA+TGG - chr6_1:100613621-100613640 Msa0902360:CDS 45.0%
GAACCATTTGCAGGCAAATG+TGG + chr6_1:100613627-100613646 None:intergenic 45.0%
GTCTCTGGACTCCTAAAAGT+TGG - chr6_1:100613702-100613721 Msa0902360:intron 45.0%
CATACCTTGCACAGCTTCAT+AGG + chr6_1:100613757-100613776 None:intergenic 45.0%
CTATGAAGCTGTGCAAGGTA+TGG - chr6_1:100613755-100613774 Msa0902360:intron 45.0%
ATATGGACTTCACTGGATCC+AGG + chr6_1:100614031-100614050 None:intergenic 45.0%
AACAGTCTGACAAAGTACGC+TGG - chr6_1:100614328-100614347 Msa0902360:CDS 45.0%
GTATCTTGCCAACAAGCTCA+TGG + chr6_1:100614377-100614396 None:intergenic 45.0%
TTGTCTTTGTGGTTGCAGTG+TGG - chr6_1:100614545-100614564 Msa0902360:intron 45.0%
AAGTTCAGGGCTTTCAGCAA+AGG - chr6_1:100614618-100614637 Msa0902360:intron 45.0%
TCTGTCAAGAGCCATTTCCA+TGG + chr6_1:100614662-100614681 None:intergenic 45.0%
GCTTGCACCTGTTATCATGA+AGG - chr6_1:100614902-100614921 Msa0902360:CDS 45.0%
ATGTCGATGATACCTCTTGG+TGG + chr6_1:100614950-100614969 None:intergenic 45.0%
GAGATGTCGATGATACCTCT+TGG + chr6_1:100614953-100614972 None:intergenic 45.0%
!! ATCTTTCTCTGGAATCGTCG+AGG - chr6_1:100615378-100615397 Msa0902360:intron 45.0%
! AAGTTTAACAGCCGGTTCCA+AGG + chr6_1:100615437-100615456 None:intergenic 45.0%
CTGGAAGTAGTGACAGAAAC+TGG + chr6_1:100615500-100615519 None:intergenic 45.0%
CAGTTTCTGTCACTACTTCC+AGG - chr6_1:100615498-100615517 Msa0902360:intron 45.0%
TTCTGTCACTACTTCCAGGT+TGG - chr6_1:100615502-100615521 Msa0902360:intron 45.0%
GAACTCAAGTTTCTCCAACC+TGG + chr6_1:100615519-100615538 None:intergenic 45.0%
! TCAGGTTGCGGCAAAAAAGA+GGG - chr6_1:100615609-100615628 Msa0902360:CDS 45.0%
TAAGCGGTAGACATGGTCAA+AGG + chr6_1:100615700-100615719 None:intergenic 45.0%
! TGCACAGGGTTTTCATCTTC+TGG + chr6_1:100615723-100615742 None:intergenic 45.0%
TGGAAGCAGAAAGATTTGGC+AGG + chr6_1:100616136-100616155 None:intergenic 45.0%
GCAAAGCTCTGTGCTGTATA+TGG + chr6_1:100616156-100616175 None:intergenic 45.0%
! AGTTCTGCTACTGGTGATGA+TGG + chr6_1:100616221-100616240 None:intergenic 45.0%
GCAATGACAAGTTCTGCTAC+TGG + chr6_1:100616230-100616249 None:intergenic 45.0%
TAGTCCTATCAAAGGTGGAG+TGG - chr6_1:100616405-100616424 Msa0902360:intron 45.0%
CGAGTCGTGCAAATTAGACA+AGG - chr6_1:100616492-100616511 Msa0902360:CDS 45.0%
! GGTGCCATGCTATCTTTAAG+AGG + chr6_1:100617030-100617049 None:intergenic 45.0%
TAGACCGTTTGGCAAGTTTC+TGG + chr6_1:100617077-100617096 None:intergenic 45.0%
ATAGGCACATGTAGACCGTT+TGG + chr6_1:100617088-100617107 None:intergenic 45.0%
TAAATTCAACCCACCTCCTC+AGG + chr6_1:100617117-100617136 None:intergenic 45.0%
GCTTCTTGCTTACCAAATGC+TGG - chr6_1:100617290-100617309 Msa0902360:CDS 45.0%
GAACTTTGCTCTCAGCATCA+CGG + chr6_1:100617351-100617370 None:intergenic 45.0%
TGATGCTGAGAGCAAAGTTC+AGG - chr6_1:100617351-100617370 Msa0902360:intron 45.0%
GAACTACTTGCAGGCTATTG+TGG - chr6_1:100617373-100617392 Msa0902360:intron 45.0%
GCAGTACTGTAAGTTACGAG+AGG - chr6_1:100617504-100617523 Msa0902360:intron 45.0%
AAGGGAACAATACTGACCAG+AGG - chr6_1:100617627-100617646 Msa0902360:intron 45.0%
CTAGCTAACTGCTCTTTCAG+TGG + chr6_1:100617931-100617950 None:intergenic 45.0%
! GTTTTCATTGCCATCTGTCG+AGG - chr6_1:100617988-100618007 Msa0902360:CDS 45.0%
TTGCCATCTGTCGAGGTTAT+TGG - chr6_1:100617995-100618014 Msa0902360:CDS 45.0%
TGCCATCTGTCGAGGTTATT+GGG - chr6_1:100617996-100618015 Msa0902360:CDS 45.0%
AACCGTGTATGCATGAATGC+AGG - chr6_1:100618413-100618432 Msa0902360:intron 45.0%
GTATGCATGAATGCAGGTTC+TGG - chr6_1:100618419-100618438 Msa0902360:intron 45.0%
! GGTCACACCAATTTTGTAGC+AGG - chr6_1:100618662-100618681 Msa0902360:five_prime_UTR 45.0%
TAAGCAACTCAACTGCTCCT+AGG - chr6_1:100618687-100618706 Msa0902360:five_prime_UTR 45.0%
AGTGGAATGAAAAGTGGCGG+CGG - chr6_1:100611645-100611664 Msa0902360:CDS 50.0%
GCGGTTGAGACATTCGATAG+CGG - chr6_1:100611741-100611760 Msa0902360:intron 50.0%
!! TATGGACGCCAGCGTTGATT+CGG - chr6_1:100611776-100611795 Msa0902360:intron 50.0%
TTCCTCTTCCGAATCAACGC+TGG + chr6_1:100611787-100611806 None:intergenic 50.0%
TTGGGGACTCTGTTGTCTTG+TGG + chr6_1:100611843-100611862 None:intergenic 50.0%
CAAGACAACAGAGTCCCCAA+TGG - chr6_1:100611843-100611862 Msa0902360:CDS 50.0%
GGAATGTTGCTCAGATGCCA+CGG - chr6_1:100611883-100611902 Msa0902360:CDS 50.0%
CTGGAAGACAAGGAATGACG+AGG - chr6_1:100611964-100611983 Msa0902360:CDS 50.0%
ACAAGGAATGACGAGGGATC+CGG - chr6_1:100611971-100611990 Msa0902360:CDS 50.0%
!! TGAGGAGTGCTGCTAATGGA+AGG - chr6_1:100611997-100612016 Msa0902360:intron 50.0%
GCTGCTAATGGAAGGCAGAA+TGG - chr6_1:100612005-100612024 Msa0902360:intron 50.0%
GGATGATTCGTCGGATTCTG+CGG - chr6_1:100612037-100612056 Msa0902360:intron 50.0%
AGCAGGGCTTATATGTCAGC+AGG - chr6_1:100612119-100612138 Msa0902360:intron 50.0%
GCAGGGCTTATATGTCAGCA+GGG - chr6_1:100612120-100612139 Msa0902360:intron 50.0%
ACTACGTAGCACGGACACTT+CGG - chr6_1:100612287-100612306 Msa0902360:intron 50.0%
TGTCCGACATTGACACGTGT+TGG + chr6_1:100612326-100612345 None:intergenic 50.0%
GTCAATGTCGGACACTCACA+CGG - chr6_1:100612332-100612351 Msa0902360:intron 50.0%
GTAAGTGTCTGTGCTGTGTC+CGG - chr6_1:100612406-100612425 Msa0902360:intron 50.0%
CACGGACACAGACACAATAC+CGG + chr6_1:100612428-100612447 None:intergenic 50.0%
TGTCTGTGTCCGTGCTTCAT+AGG - chr6_1:100612434-100612453 Msa0902360:CDS 50.0%
GAACCATGGAGATGCAAGCT+CGG - chr6_1:100612688-100612707 Msa0902360:intron 50.0%
TTTCCGAGCTTGCATCTCCA+TGG + chr6_1:100612694-100612713 None:intergenic 50.0%
TGCGTTCACAGAACTGCTAC+TGG - chr6_1:100612873-100612892 Msa0902360:intron 50.0%
!! CAGAACTGCTACTGGTTCAG+AGG - chr6_1:100612881-100612900 Msa0902360:intron 50.0%
AAGGCGAGGTGGTTGTGAAT+TGG + chr6_1:100612919-100612938 None:intergenic 50.0%
TGAAATGTTGGAAGGCGAGG+TGG + chr6_1:100612930-100612949 None:intergenic 50.0%
GCATGAAATGTTGGAAGGCG+AGG + chr6_1:100612933-100612952 None:intergenic 50.0%
! TTTTCAGTGCTCTTGGGCCA+TGG - chr6_1:100613039-100613058 Msa0902360:intron 50.0%
GACATGCTACATCCAGTAGG+AGG + chr6_1:100613495-100613514 None:intergenic 50.0%
GGCACGCTCTTAGGAAAGTT+CGG - chr6_1:100613595-100613614 Msa0902360:CDS 50.0%
TGTGTCAGGGAACCATTTGC+AGG + chr6_1:100613636-100613655 None:intergenic 50.0%
TCCTCCTATGAAGCTGTGCA+AGG - chr6_1:100613750-100613769 Msa0902360:intron 50.0%
ACCTTGCACAGCTTCATAGG+AGG + chr6_1:100613754-100613773 None:intergenic 50.0%
ACGCCCAAAATGCTTTCCCT+TGG + chr6_1:100614184-100614203 None:intergenic 50.0%
TATCAGCGATAGCAGCCACT+TGG + chr6_1:100614215-100614234 None:intergenic 50.0%
GGCTGCTATCGCTGATAATC+CGG - chr6_1:100614218-100614237 Msa0902360:intron 50.0%
AGTCTGACAAAGTACGCTGG+TGG - chr6_1:100614331-100614350 Msa0902360:CDS 50.0%
! CAAGCTCATGGTCTGGTTCA+CGG + chr6_1:100614365-100614384 None:intergenic 50.0%
GAACCAGACCATGAGCTTGT+TGG - chr6_1:100614366-100614385 Msa0902360:CDS 50.0%
TTGCCAACAAGCTCATGGTC+TGG + chr6_1:100614372-100614391 None:intergenic 50.0%
! GTTGCAGTGTGGTTCTGTAG+CGG - chr6_1:100614556-100614575 Msa0902360:intron 50.0%
GGAGACAGTTGCATATGACC+TGG - chr6_1:100614577-100614596 Msa0902360:intron 50.0%
AAGGCAATCTGCTGTTGGTG+TGG + chr6_1:100614865-100614884 None:intergenic 50.0%
AACTTCCTTGAGCCACCAAG+AGG - chr6_1:100614935-100614954 Msa0902360:CDS 50.0%
! TGATACCTCTTGGTGGCTCA+AGG + chr6_1:100614943-100614962 None:intergenic 50.0%
TCGACTACTAGGAGAGACCA+AGG - chr6_1:100615297-100615316 Msa0902360:intron 50.0%
! CTCAGGTTGCGGCAAAAAAG+AGG - chr6_1:100615608-100615627 Msa0902360:CDS 50.0%
CGGCAAAAAAGAGGGCTAGA+AGG - chr6_1:100615617-100615636 Msa0902360:CDS 50.0%
CTTCTGGTAAGCGGTAGACA+TGG + chr6_1:100615707-100615726 None:intergenic 50.0%
CGGTGGACAAGATATGAGGA+AGG + chr6_1:100616192-100616211 None:intergenic 50.0%
CTGTCGGTGGACAAGATATG+AGG + chr6_1:100616196-100616215 None:intergenic 50.0%
CTCATATCTTGTCCACCGAC+AGG - chr6_1:100616194-100616213 Msa0902360:CDS 50.0%
!! ACTGGTGATGATGGACCTGT+CGG + chr6_1:100616212-100616231 None:intergenic 50.0%
GCATCCACTCCACCTTTGAT+AGG + chr6_1:100616412-100616431 None:intergenic 50.0%
TGACATGTATGAGCGGCTGA+AGG - chr6_1:100616693-100616712 Msa0902360:CDS 50.0%
ATGAGGTCATCATTTGCCGC+TGG - chr6_1:100616731-100616750 Msa0902360:CDS 50.0%
CCAAGGTATATTCTGGCCAG+CGG + chr6_1:100616750-100616769 None:intergenic 50.0%
ACGGTCTACATGTGCCTATG+TGG - chr6_1:100617089-100617108 Msa0902360:intron 50.0%
ATGTGCCTATGTGGTTCCTG+AGG - chr6_1:100617098-100617117 Msa0902360:intron 50.0%
TATGTGGTTCCTGAGGAGGT+GGG - chr6_1:100617105-100617124 Msa0902360:intron 50.0%
GATGTCGAGCATCCTCTTCA+AGG + chr6_1:100617234-100617253 None:intergenic 50.0%
TGCTCGACATCTTACGTCCA+AGG - chr6_1:100617243-100617262 Msa0902360:CDS 50.0%
! GGTGCTGTGTTTCCAGCATT+TGG + chr6_1:100617305-100617324 None:intergenic 50.0%
AATGCTGGAAACACAGCACC+TGG - chr6_1:100617305-100617324 Msa0902360:CDS 50.0%
GGCTATTGTGGAGAAACTCG+TGG - chr6_1:100617385-100617404 Msa0902360:intron 50.0%
GTCCCAATAACCTCGACAGA+TGG + chr6_1:100618001-100618020 None:intergenic 50.0%
TCGAGGTTATTGGGACCGAA+TGG - chr6_1:100618005-100618024 Msa0902360:CDS 50.0%
CGAGGTTATTGGGACCGAAT+GGG - chr6_1:100618006-100618025 Msa0902360:CDS 50.0%
TTATTGGGACCGAATGGGAC+AGG - chr6_1:100618011-100618030 Msa0902360:CDS 50.0%
CGAACCTCCATGATGCATCT+AGG + chr6_1:100618513-100618532 None:intergenic 50.0%
CGCACTTAGATGGGTCAGAG+AGG - chr6_1:100611307-100611326 Msa0902360:CDS 55.0%
ATGAAAAGTGGCGGCGGTAG+AGG - chr6_1:100611651-100611670 Msa0902360:CDS 55.0%
TGAAAAGTGGCGGCGGTAGA+GGG - chr6_1:100611652-100611671 Msa0902360:CDS 55.0%
AATGTCTCAACCGCCGAGAC+AGG + chr6_1:100611735-100611754 None:intergenic 55.0%
TTGCTCAGATGCCACGGTCT+CGG - chr6_1:100611889-100611908 Msa0902360:CDS 55.0%
TGACGAGGGATCCGGTAATG+AGG - chr6_1:100611979-100611998 Msa0902360:CDS 55.0%
! CCACAAAATGGGGGTGCACT+CGG + chr6_1:100612554-100612573 None:intergenic 55.0%
GCGAGGTGGTTGTGAATTGG+AGG + chr6_1:100612916-100612935 None:intergenic 55.0%
GCGTCTTTGCCTTCACGCTT+GGG - chr6_1:100613091-100613110 Msa0902360:CDS 55.0%
! CTTCTGGTTGGCACGCTCTT+AGG - chr6_1:100613586-100613605 Msa0902360:CDS 55.0%
GGATCCAGGCTGCAACCTAA+TGG + chr6_1:100614017-100614036 None:intergenic 55.0%
TGGGCGTGTTCTTGTCCAAG+TGG - chr6_1:100614197-100614216 Msa0902360:CDS 55.0%
! TTAACAGCCGGTTCCAAGGC+AGG + chr6_1:100615433-100615452 None:intergenic 55.0%
!! CAGAAACTGGTTTGGGCCTC+AGG + chr6_1:100615487-100615506 None:intergenic 55.0%
CCGCTGGCCAGAATATACCT+TGG - chr6_1:100616747-100616766 Msa0902360:CDS 55.0%
TGCCTATGTGGTTCCTGAGG+AGG - chr6_1:100617101-100617120 Msa0902360:intron 55.0%
CACCTCCTCAGGAACCACAT+AGG + chr6_1:100617106-100617125 None:intergenic 55.0%
CTATGTGGTTCCTGAGGAGG+TGG - chr6_1:100617104-100617123 Msa0902360:intron 55.0%
ACTTCGCTAAGTCGCTCACC+AGG + chr6_1:100617326-100617345 None:intergenic 55.0%
TCAATGTGCGCTCTTGGGTC+CGG - chr6_1:100618352-100618371 Msa0902360:intron 55.0%
CGCTCTTGGGTCCGGATTAT+GGG - chr6_1:100618360-100618379 Msa0902360:intron 55.0%
!! GGAGGCACCTAGATGCATCA+TGG - chr6_1:100618503-100618522 Msa0902360:intron 55.0%
GGCACCTAGATGCATCATGG+AGG - chr6_1:100618506-100618525 Msa0902360:intron 55.0%
!! CGCCAGCGTTGATTCGGAAG+AGG - chr6_1:100611782-100611801 Msa0902360:intron 60.0%
TCACTCGCATACCGAGACCG+TGG + chr6_1:100611903-100611922 None:intergenic 60.0%
GCACGGACACTTCGGATCGA+AGG - chr6_1:100612295-100612314 Msa0902360:intron 60.0%
! CCGAGTGCACCCCCATTTTG+TGG - chr6_1:100612551-100612570 Msa0902360:CDS 60.0%
GTGAAGGCAAAGACGCGCAC+AGG + chr6_1:100613087-100613106 None:intergenic 60.0%
CGCGTCTTTGCCTTCACGCT+TGG - chr6_1:100613090-100613109 Msa0902360:CDS 60.0%
ACTGCATCGCCCAAGCGTGA+AGG + chr6_1:100613103-100613122 None:intergenic 60.0%
CGCTTGGGCGATGCAGTGTA+TGG - chr6_1:100613106-100613125 Msa0902360:CDS 60.0%
! GACGCCATTAGGTTGCAGCC+TGG - chr6_1:100614010-100614029 Msa0902360:intron 60.0%
GGAGCTGCATGACTGGATGC+TGG + chr6_1:100615412-100615431 None:intergenic 60.0%
CAAGGCAGGAGCTGCATGAC+TGG + chr6_1:100615419-100615438 None:intergenic 60.0%
CAGTCATGCAGCTCCTGCCT+TGG - chr6_1:100615417-100615436 Msa0902360:CDS 60.0%
TGCAGCTCCTGCCTTGGAAC+CGG - chr6_1:100615423-100615442 Msa0902360:CDS 60.0%
!! GGTGATGATGGACCTGTCGG+TGG + chr6_1:100616209-100616228 None:intergenic 60.0%
GCGCTCTTGGGTCCGGATTA+TGG - chr6_1:100618359-100618378 Msa0902360:intron 60.0%
AGTGGCGGCGGTAGAGGGTG+TGG - chr6_1:100611657-100611676 Msa0902360:CDS 70.0%
GTGGGGCTCGACCCTCCTAC+TGG - chr6_1:100613480-100613499 Msa0902360:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 100610917 100618923 100610917 ID=Msa0902360;Name=Msa0902360
chr6_1 mRNA 100610917 100618923 100610917 ID=Msa0902360-mRNA-1;Parent=Msa0902360;Name=Msa0902360-mRNA-1;_AED=0.11;_eAED=0.11;_QI=364|1|1|1|1|1|22|336|1229
chr6_1 exon 100610917 100611405 100610917 ID=Msa0902360-mRNA-1:exon:17834;Parent=Msa0902360-mRNA-1
chr6_1 exon 100611634 100611705 100611634 ID=Msa0902360-mRNA-1:exon:17833;Parent=Msa0902360-mRNA-1
chr6_1 exon 100611808 100612002 100611808 ID=Msa0902360-mRNA-1:exon:17832;Parent=Msa0902360-mRNA-1
chr6_1 exon 100612428 100612628 100612428 ID=Msa0902360-mRNA-1:exon:17831;Parent=Msa0902360-mRNA-1
chr6_1 exon 100612718 100612879 100612718 ID=Msa0902360-mRNA-1:exon:17830;Parent=Msa0902360-mRNA-1
chr6_1 exon 100613060 100613197 100613060 ID=Msa0902360-mRNA-1:exon:17829;Parent=Msa0902360-mRNA-1
chr6_1 exon 100613327 100613432 100613327 ID=Msa0902360-mRNA-1:exon:17828;Parent=Msa0902360-mRNA-1
chr6_1 exon 100613549 100613716 100613549 ID=Msa0902360-mRNA-1:exon:17827;Parent=Msa0902360-mRNA-1
chr6_1 exon 100614037 100614227 100614037 ID=Msa0902360-mRNA-1:exon:17826;Parent=Msa0902360-mRNA-1
chr6_1 exon 100614321 100614545 100614321 ID=Msa0902360-mRNA-1:exon:17825;Parent=Msa0902360-mRNA-1
chr6_1 exon 100614884 100615004 100614884 ID=Msa0902360-mRNA-1:exon:17824;Parent=Msa0902360-mRNA-1
chr6_1 exon 100615114 100615277 100615114 ID=Msa0902360-mRNA-1:exon:17823;Parent=Msa0902360-mRNA-1
chr6_1 exon 100615394 100615507 100615394 ID=Msa0902360-mRNA-1:exon:17822;Parent=Msa0902360-mRNA-1
chr6_1 exon 100615601 100615706 100615601 ID=Msa0902360-mRNA-1:exon:17821;Parent=Msa0902360-mRNA-1
chr6_1 exon 100615787 100615874 100615787 ID=Msa0902360-mRNA-1:exon:17820;Parent=Msa0902360-mRNA-1
chr6_1 exon 100616069 100616374 100616069 ID=Msa0902360-mRNA-1:exon:17819;Parent=Msa0902360-mRNA-1
chr6_1 exon 100616459 100616577 100616459 ID=Msa0902360-mRNA-1:exon:17818;Parent=Msa0902360-mRNA-1
chr6_1 exon 100616660 100616794 100616660 ID=Msa0902360-mRNA-1:exon:17817;Parent=Msa0902360-mRNA-1
chr6_1 exon 100616885 100616956 100616885 ID=Msa0902360-mRNA-1:exon:17816;Parent=Msa0902360-mRNA-1
chr6_1 exon 100617117 100617325 100617117 ID=Msa0902360-mRNA-1:exon:17815;Parent=Msa0902360-mRNA-1
chr6_1 exon 100617647 100618243 100617647 ID=Msa0902360-mRNA-1:exon:17814;Parent=Msa0902360-mRNA-1
chr6_1 exon 100618512 100618923 100618512 ID=Msa0902360-mRNA-1:exon:17813;Parent=Msa0902360-mRNA-1
chr6_1 five_prime_UTR 100618560 100618923 100618560 ID=Msa0902360-mRNA-1:five_prime_utr;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100618512 100618559 100618512 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100617647 100618243 100617647 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100617117 100617325 100617117 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100616885 100616956 100616885 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100616660 100616794 100616660 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100616459 100616577 100616459 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100616069 100616374 100616069 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100615787 100615874 100615787 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100615601 100615706 100615601 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100615394 100615507 100615394 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100615114 100615277 100615114 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100614884 100615004 100614884 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100614321 100614545 100614321 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100614037 100614227 100614037 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100613549 100613716 100613549 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100613327 100613432 100613327 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100613060 100613197 100613060 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100612718 100612879 100612718 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100612428 100612628 100612428 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100611808 100612002 100611808 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100611634 100611705 100611634 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 CDS 100611253 100611405 100611253 ID=Msa0902360-mRNA-1:cds;Parent=Msa0902360-mRNA-1
chr6_1 three_prime_UTR 100610917 100611252 100610917 ID=Msa0902360-mRNA-1:three_prime_utr;Parent=Msa0902360-mRNA-1
Gene Sequence

>Msa0902360

ATGTTCACTGAAGGACTTGACAAAAACGCACTTAGATGGGTCAGAGAGAAGGAAGTGCCATTCTCAAACACAGCTATGAGATCTCGTGATCCGATTAGTGGAATGAAAAGTGGCGGCGGTAGAGGGTGTGGATTACCACCACCATCAAAATTTAGGAGTGGTCATCTTCCTGCTAATAAGTTACCTGTCTCGGCGGTTGAGACATTCGATAGCGGTTCAAATAGTGATATGGACGCCAGCGTTGATTCGGAAGAGGAAGTTTATGGTGGAAGGTATTCTTTGGATTCATCACCACAAGACAACAGAGTCCCCAATGGTGCTGCTAAGAGATATGGGAATGTTGCTCAGATGCCACGGTCTCGGTATGCGAGTGATTACACGTTCTCTGATGTTAGTTCGTCCAGAGAAACACTTACTGGAAGACAAGGAATGACGAGGGATCCGGTAATGAGGAGTGCTGCTAATGGAAGGCAGAATGGTTTCACTGAGGATGATTCGTCGGATTCTGCGGCTAGCTCAGAATTTTCTACCACACAAGTAGGGAGTAGTATCAATGGCACTCTTCCAAAAAGCAGGGCTTATATGTCAGCAGGGTATGCTTCTAGTGTACCTTCAAGGATGAATGTTCAAAGTTCTGCAGAAAAGAGTGGAAGGTTATCTGATGACGAGGACGAAGACATTCCGAGTGCACCCCCATTTTGTGGTTCTACTCAAGAGATAAGACAAACTAACGAGGAAATTCCAACTTCTGCAACACGTAGTACTCCAAATAAAGCAGAATCAAGTACTTTGAAATCTGTATCCAGGGATAAGTTAGAGAACCATGGAGATGCAAGCTCGGAAAAATTCGTTAGAACTGCTACTGGTTCAGAGGGTGCTGCATCCTCCAATTCACAACCACCTCGCCTTCCAACATTTCATGCAAGTGCTCTTGGGCCATGGTATGCAGTAATTGCATACGACGCCTGTGCGCGTCTTTGCCTTCACGCTTGGGCGATGCAGTGTATGGAAGCTCCAATGTTTTTGGAAAATGAATGCTCTTTACTTAGAGATGCATTTGGATTGCGACAAGTGCTTCTTCAACCAGAAGAGGAGCTAATGGTGAAATGCAATGGAGAACTTTCTAGTGAGGGTGTTGCTCCTAAACTGAAAAAACTTATTGGCAAGATGAAGGTGCAAGTACGCAAAGTCAAAGTGGGGCTCGACCCTCCTACTGGATGTAGCATGTCATCAATAGTGACACATAAAATTAAAATGGATTCAATGCGACACCACTTCTCAAATTTGCAGTCAAAACTATCTTCTGGTTGGCACGCTCTTAGGAAAGTTCGGTTTGTACCACATTTGCCTGCAAATGGTTCCCTGACACATAAAAGCTTGGCATATGTGCATGCTAGCACACGCTATATACAACAAGTCTCTGGACTCCTAAAAGTTGGTGTAACAACTTTGCGGAATAGTTCATCCTCCTATGAAGCTGTGCAAGAGACATTCACGTGTTTCTTACGACTCAAAAGTGTAGTTGAAGAAGACGCCATTAGGTTGCAGCCTGGATCCAGTGAAGTCCATATGTTTTTTCCAGATAGTCTTGGAGATGATTTGCTCATTGAAGTTCAAGATTCCAAGGGAAAGCATTTTGGGCGTGTTCTTGTCCAAGTGGCTGCTATCGCTGATAATCCGTCTGACAAAGTACGCTGGTGGAATGTTTACCGTGAACCAGACCATGAGCTTGTTGGCAAGATACAGCTTTATATACTCTATTCAACCAGTGCAGATGACAATAGTCATCTTAAGTGTGGTTCTGTAGCGGAGACAGTTGCATATGACCTGGTTCTAGAAGTTGCAATGAAAGTTCAGGGCTTTCAGCAAAGGAACCTAGAATTACATGGTCCATGGAAATGGCTCTTGACAGAGTTTGCTTCATATTATGGTGTGTCTGAGATTTATACGAAGCTGAGATATCTATCGTATGTCATGGATGTTGCCACACCAACAGCAGATTGCCTTAACTTGGTATATAATCTGCTTGCACCTGTTATCATGAAGGGAAATAGCAAAACTTCCTTGAGCCACCAAGAGAATCGACTACTAGGAGAGACCAAGGACGAAATTGAACAGATACTCACACTTACATTTGAGAATTACAAGTCACTTGATGAGTCATCTTTCTCTGGAATCGTCGAGGTTTTCAGACCAGCATCCAGTCATGCAGCTCCTGCCTTGGAACCGGCTGTTAAACTTTACAAGCTTCTTCATGATATCTTATCTCCTGAGGCCCAAACCAGTTTCTGTCACTACTTCCAGGTTGCGGCAAAAAAGAGGGCTAGAAGGCACCTTTCTGACACAGATGAATATATTGCACAGAATAATGAAAGCTGTTTGATGGATCCTTTGACCATGTCTACCGCTTACCAGAAGATGAAAACCCTGTGCATAAATCTTAGGAATGAGATCTATGCTGATATTCAGATTCATAATCAAAATATACTTCCTAGCTTTGTAGACCTGCCAAATCTTTCTGCTTCCATATACAGCACAGAGCTTTGCAATAGATTACGAGCCTTCCTCATATCTTGTCCACCGACAGGTCCATCATCACCAGTAGCAGAACTTGTCATTGCAACATCCGATTTTCAAAGAGATCTTTCAGGCTGGAACATTAATCCTATCAAAGGTGGAGTGGATGCAAAAGAGTTGTTCCATTTGTATATTCTTGTTTGGATCCAAGATAAACGTCTATCTTTGCTCGAGTCGTGCAAATTAGACAAGGTGAAATGGTCTGGTGTTAGAACACAGCATTCTACTACTCCCTTTGTTGATGACATGTATGAGCGGCTGAAGGAAACATTGACAGACTATGAGGTCATCATTTGCCGCTGGCCAGAATATACCTTGGTTCTAGAAAATGCAATAGCTGATATTGAGAAGGCGATTGTGGAAGCTTTAGATAAACAGTATGCGGATGTATTAGCTCCTCTTAAAGATAGCATGGCACCTAAGAAATTTGGGCTTAAATATGTCCAGAAACTTGCCAAACGGTCTACATGTGCCTATGTGGTTCCTGAGGAGGTTGGAATTCTTTTGAATTCCTTGAAGAGGATGCTCGACATCTTACGTCCAAGGATTGAATCACAGTTCAAATCATGGGCTTCTTGCTTACCAAATGCTGGAAACACAGCACCTGGTGAGCGACTTAGCGAAGTGACCGTGATGCTGAGAGCAAAGTTCAGGAACTACTTGCAGGCTATTGTGGAGAAACTCGTGGAAAATACGAAGTTACAGAATGCTACAAAATTAAAGAAGATTCTTCAAGATTCAAAGGAAACAGTGGTAGAGTCTGATTTAAAAAGTAGAATGCAACCACTGAAAGAGCAGTTAGCTAGTACCATAAGCTATCTTCACAGTATTTGTGAAACTCATGTTTTCATTGCCATCTGTCGAGGTTATTGGGACCGAATGGGACAGGAAATTTTGAGTTTCTTGGAGAACAGAAAAGAGAATAGATCATGGTATAAAGGTTCAAGGGTGGCTGTTTCTGTTCTGGATGATACATTTGCCTCACAGATGCAACAACTTCTAGGAAATGCGATACAAGAGAAAGACATGGAGGCACCTAGATGCATCATGGAGGTTCGTTCTATGCTATGTAAAGACGCTCCTAATCACAAGGACAACAGTTTTTACTATTAG
Protein sequence

>Msa0902360

MFTEGLDKNALRWVREKEVPFSNTAMRSRDPISGMKSGGGRGCGLPPPSKFRSGHLPANKLPVSAVETFDSGSNSDMDASVDSEEEVYGGRYSLDSSPQDNRVPNGAAKRYGNVAQMPRSRYASDYTFSDVSSSRETLTGRQGMTRDPVMRSAANGRQNGFTEDDSSDSAASSEFSTTQVGSSINGTLPKSRAYMSAGYASSVPSRMNVQSSAEKSGRLSDDEDEDIPSAPPFCGSTQEIRQTNEEIPTSATRSTPNKAESSTLKSVSRDKLENHGDASSEKFVRTATGSEGAASSNSQPPRLPTFHASALGPWYAVIAYDACARLCLHAWAMQCMEAPMFLENECSLLRDAFGLRQVLLQPEEELMVKCNGELSSEGVAPKLKKLIGKMKVQVRKVKVGLDPPTGCSMSSIVTHKIKMDSMRHHFSNLQSKLSSGWHALRKVRFVPHLPANGSLTHKSLAYVHASTRYIQQVSGLLKVGVTTLRNSSSSYEAVQETFTCFLRLKSVVEEDAIRLQPGSSEVHMFFPDSLGDDLLIEVQDSKGKHFGRVLVQVAAIADNPSDKVRWWNVYREPDHELVGKIQLYILYSTSADDNSHLKCGSVAETVAYDLVLEVAMKVQGFQQRNLELHGPWKWLLTEFASYYGVSEIYTKLRYLSYVMDVATPTADCLNLVYNLLAPVIMKGNSKTSLSHQENRLLGETKDEIEQILTLTFENYKSLDESSFSGIVEVFRPASSHAAPALEPAVKLYKLLHDILSPEAQTSFCHYFQVAAKKRARRHLSDTDEYIAQNNESCLMDPLTMSTAYQKMKTLCINLRNEIYADIQIHNQNILPSFVDLPNLSASIYSTELCNRLRAFLISCPPTGPSSPVAELVIATSDFQRDLSGWNINPIKGGVDAKELFHLYILVWIQDKRLSLLESCKLDKVKWSGVRTQHSTTPFVDDMYERLKETLTDYEVIICRWPEYTLVLENAIADIEKAIVEALDKQYADVLAPLKDSMAPKKFGLKYVQKLAKRSTCAYVVPEEVGILLNSLKRMLDILRPRIESQFKSWASCLPNAGNTAPGERLSEVTVMLRAKFRNYLQAIVEKLVENTKLQNATKLKKILQDSKETVVESDLKSRMQPLKEQLASTISYLHSICETHVFIAICRGYWDRMGQEILSFLENRKENRSWYKGSRVAVSVLDDTFASQMQQLLGNAIQEKDMEAPRCIMEVRSMLCKDAPNHKDNSFYY*