AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1207190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1207190 MtrunA17_Chr4g0056061 98.885 538 6 0 1 538 1 538 0.0 1112
Msa1207190 MtrunA17_Chr5g0399311 83.299 479 76 1 22 496 34 512 0.0 852
Msa1207190 MtrunA17_Chr3g0143821 62.470 413 153 2 79 490 82 493 0.0 548
Msa1207190 MtrunA17_Chr5g0448581 57.206 451 178 4 68 506 68 515 0.0 538
Msa1207190 MtrunA17_Chr1g0160781 44.192 396 187 9 74 444 115 501 3.10e-107 331
Msa1207190 MtrunA17_Chr4g0043911 38.664 494 271 14 28 496 68 554 7.22e-103 320
Msa1207190 MtrunA17_Chr3g0077321 41.355 428 230 9 81 491 123 546 3.57e-101 316
Msa1207190 MtrunA17_Chr5g0417871 42.222 405 211 8 104 491 81 479 2.34e-98 306
Msa1207190 MtrunA17_Chr5g0426591 42.711 391 213 6 78 464 84 467 3.34e-97 305
Msa1207190 MtrunA17_Chr4g0042711 41.606 411 217 8 104 497 93 497 3.70e-97 304
Msa1207190 MtrunA17_Chr4g0008451 41.531 431 228 11 76 491 202 623 5.65e-97 307
Msa1207190 MtrunA17_Chr5g0436321 42.092 411 216 12 97 492 150 553 4.58e-95 300
Msa1207190 MtrunA17_Chr3g0132371 45.652 368 189 7 108 468 141 504 8.44e-95 299
Msa1207190 MtrunA17_Chr6g0455571 44.032 377 203 6 101 470 108 483 1.53e-93 295
Msa1207190 MtrunA17_Chr3g0123521 39.492 433 235 11 80 489 119 547 5.03e-92 292
Msa1207190 MtrunA17_Chr5g0424241 44.382 356 174 7 109 444 158 509 8.29e-92 292
Msa1207190 MtrunA17_Chr2g0284071 36.364 462 239 14 80 491 186 642 2.45e-91 293
Msa1207190 MtrunA17_Chr4g0061781 41.076 409 229 7 101 498 109 516 4.90e-91 288
Msa1207190 MtrunA17_Chr4g0070551 38.876 427 237 11 79 490 201 618 8.29e-91 291
Msa1207190 MtrunA17_Chr3g0129981 44.675 338 179 4 111 444 117 450 1.50e-90 287
Msa1207190 MtrunA17_Chr2g0307971 42.400 375 208 6 101 468 108 481 2.18e-89 284
Msa1207190 MtrunA17_Chr1g0204121 38.756 418 247 6 79 490 61 475 4.80e-87 278
Msa1207190 MtrunA17_Chr5g0412251 36.222 450 242 14 79 490 60 502 1.49e-80 260
Msa1207190 MtrunA17_Chr4g0075311 36.199 442 226 11 73 464 131 566 1.36e-79 260
Msa1207190 MtrunA17_Chr1g0204141 37.678 422 249 8 79 490 61 478 3.55e-79 257
Msa1207190 MtrunA17_Chr3g0087291 38.760 387 223 8 111 489 176 556 7.92e-77 252
Msa1207190 MtrunA17_Chr3g0132951 35.681 426 233 12 101 489 94 515 1.86e-75 248
Msa1207190 MtrunA17_Chr4g0010511 39.848 394 209 10 111 489 236 616 1.42e-72 243
Msa1207190 MtrunA17_Chr4g0003561 31.250 368 221 9 78 433 46 393 1.09e-50 179
Msa1207190 MtrunA17_Chr7g0220381 34.868 304 172 9 97 380 88 385 2.92e-45 169
Msa1207190 MtrunA17_Chr1g0146501 29.650 371 232 9 40 383 12 380 3.21e-42 160
Msa1207190 MtrunA17_Chr3g0127811 32.404 287 174 6 108 383 63 340 4.01e-40 151
Msa1207190 MtrunA17_Chr2g0298881 26.879 346 207 12 101 436 28 337 7.74e-27 112
Msa1207190 MtrunA17_Chr7g0240241 44.643 112 56 1 274 379 8 119 3.53e-24 98.2
Msa1207190 MtrunA17_Chr4g0002361 27.729 339 199 12 108 435 86 389 5.65e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1207190 AT4G16650.2 77.004 474 106 1 20 493 37 507 0.0 762
Msa1207190 AT4G16650.1 77.004 474 106 1 20 493 37 507 0.0 762
Msa1207190 AT1G76270.1 56.455 457 194 3 79 534 77 529 0.0 543
Msa1207190 AT1G20550.1 54.088 477 206 5 25 490 16 490 0.0 539
Msa1207190 AT4G38390.1 60.827 411 160 1 80 489 95 505 0.0 537
Msa1207190 AT1G14970.3 44.089 406 201 10 107 491 8 408 2.23e-108 330
Msa1207190 AT1G14970.2 44.089 406 201 10 107 491 34 434 5.13e-108 330
Msa1207190 AT2G01480.2 47.875 353 168 7 108 444 154 506 1.09e-106 330
Msa1207190 AT1G14970.1 44.089 406 201 10 107 491 154 554 2.63e-106 330
Msa1207190 AT2G01480.1 47.875 353 168 7 108 444 154 506 6.21e-106 329
Msa1207190 AT1G14020.1 42.356 399 217 6 104 490 87 484 4.57e-99 309
Msa1207190 AT1G35510.1 42.469 405 209 8 108 492 159 559 4.27e-98 308
Msa1207190 AT2G03280.1 42.462 398 215 7 104 488 84 480 5.07e-97 303
Msa1207190 AT5G64600.1 41.935 403 208 9 108 489 117 514 1.61e-96 303
Msa1207190 AT2G37980.1 38.990 495 258 17 35 497 141 623 1.16e-95 304
Msa1207190 AT1G22460.1 42.822 404 207 11 108 491 160 559 1.16e-95 302
Msa1207190 AT5G15740.1 43.501 377 205 6 101 470 99 474 4.40e-95 299
Msa1207190 AT3G54100.1 40.323 434 235 11 79 497 195 619 5.13e-94 300
Msa1207190 AT1G38065.2 43.514 370 190 8 108 460 26 393 1.86e-93 293
Msa1207190 AT1G38065.1 43.514 370 190 8 108 460 36 403 2.51e-93 293
Msa1207190 AT3G02250.1 43.236 377 206 6 101 470 99 474 2.89e-92 291
Msa1207190 AT1G38131.1 43.514 370 190 8 108 460 155 522 6.38e-92 293
Msa1207190 AT3G26370.1 40.441 408 215 10 105 490 155 556 9.54e-92 291
Msa1207190 AT2G03280.2 39.765 425 215 8 104 488 84 507 3.08e-91 289
Msa1207190 AT1G04910.1 41.860 387 217 5 79 460 61 444 1.58e-90 287
Msa1207190 AT5G35570.1 40.610 426 229 10 80 490 225 641 3.29e-90 290
Msa1207190 AT1G62330.1 38.614 404 199 9 109 464 222 624 2.35e-86 280
Msa1207190 AT1G11990.1 38.875 409 219 9 79 464 163 563 4.74e-84 272
Msa1207190 AT2G44500.1 40.674 386 218 6 111 489 180 561 3.34e-83 270
Msa1207190 AT5G01100.1 36.131 429 248 10 79 490 190 609 5.34e-82 268
Msa1207190 AT4G24530.1 36.345 476 257 16 55 490 48 517 6.15e-81 262
Msa1207190 AT1G29200.4 37.678 422 218 9 83 460 44 464 1.81e-79 258
Msa1207190 AT1G29200.1 37.678 422 218 9 83 460 44 464 1.81e-79 258
Msa1207190 AT1G29200.2 37.678 422 218 9 83 460 160 580 1.76e-78 258
Msa1207190 AT1G11990.2 35.650 446 219 10 79 464 148 585 1.78e-77 256
Msa1207190 AT1G29200.3 38.363 391 197 8 113 460 1 390 3.68e-76 247
Msa1207190 AT5G65470.1 34.956 452 245 14 79 489 59 502 7.95e-76 248
Msa1207190 AT3G07900.1 37.613 444 254 13 63 491 139 574 1.67e-75 249
Msa1207190 AT5G63390.1 37.824 386 229 7 111 489 167 548 9.41e-74 244
Msa1207190 AT1G52630.1 30.130 385 233 9 72 443 39 400 6.29e-50 178
Msa1207190 AT3G26370.2 41.395 215 114 4 105 309 155 367 1.00e-47 171
Msa1207190 AT3G30300.2 35.974 303 172 9 95 380 90 387 6.59e-47 174
Msa1207190 AT3G30300.1 35.974 303 172 9 95 380 90 387 6.59e-47 174
Msa1207190 AT2G44500.2 41.667 228 126 3 111 334 180 404 6.50e-45 164
Msa1207190 AT1G52630.2 30.120 332 199 7 124 443 2 312 7.06e-44 159
Msa1207190 AT3G03810.2 32.075 371 226 10 38 383 10 379 1.93e-43 164
Msa1207190 AT3G03810.1 32.075 371 226 10 38 383 10 379 1.93e-43 164
Msa1207190 AT3G21190.1 26.471 340 201 12 108 435 90 392 1.76e-23 103
Msa1207190 AT1G51630.1 24.706 340 207 11 108 435 91 393 1.10e-20 95.1

Find 184 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATGCGCCAATTGATATT+TGG 0.125119 8_1:-64647156 Msa1207190:CDS
ATGAACAAGAATGGGGATTT+TGG 0.208572 8_1:+64648087 None:intergenic
TGTATGTAACAGGCGATATA+TGG 0.223337 8_1:-64643631 Msa1207190:intron
TCACTCAATTCGTCTATAAA+TGG 0.225919 8_1:+64643417 None:intergenic
CGACTTCACCACACCCATTT+GGG 0.243600 8_1:+64647923 None:intergenic
GCTTAATATGTTCTCTCATT+TGG 0.246182 8_1:+64643294 None:intergenic
CCTGAAAATGCCAGCATATC+TGG 0.250790 8_1:+64644542 None:intergenic
CTTCTTTGCATTTGGTCTAA+TGG 0.257972 8_1:+64643596 None:intergenic
CTCGGGACACGCATGGTATA+TGG 0.258841 8_1:+64645299 None:intergenic
TAATTGGTTCATTAATTATC+TGG 0.271850 8_1:-64645384 Msa1207190:CDS
TTCATTTCCTCCGTTTATTT+CGG 0.275809 8_1:+64643338 None:intergenic
ATTAGATTTGGTTTGTTATT+CGG 0.295544 8_1:-64648351 Msa1207190:five_prime_UTR
TCAATTTAGATCCATGTATA+GGG 0.299524 8_1:-64643180 Msa1207190:three_prime_UTR
CTCAAGTCTTTAGAAGAAAA+AGG 0.303898 8_1:+64648032 None:intergenic
TACTTACCCCAGTTCTTTGT+TGG 0.313373 8_1:+64646288 None:intergenic
ATTGACCGCATGACCTTATC+TGG 0.317222 8_1:+64645332 None:intergenic
GCGCTAAGCTTCTTTGCATT+TGG 0.317689 8_1:+64643588 None:intergenic
CCACGCTTTCGTTCTCCGTC+AGG 0.330147 8_1:+64644024 None:intergenic
CGGCAAAGCAACTCAGTTAC+TGG 0.333215 8_1:-64642851 Msa1207190:three_prime_UTR
ATCTCCTTTGTATAGATGTT+GGG 0.341513 8_1:+64643865 None:intergenic
ATCGTCACCTGAATTAGATT+TGG 0.353653 8_1:-64648363 Msa1207190:five_prime_UTR
TCATGCGCCAATTGATATTT+GGG 0.356114 8_1:-64647155 Msa1207190:CDS
ACGACTTCACCACACCCATT+TGG 0.356500 8_1:+64647922 None:intergenic
GCTCTCCCATGAATCCTCTT+TGG 0.363004 8_1:+64643505 None:intergenic
TATGTTCTCTCATTTGGCTT+TGG 0.365917 8_1:+64643300 None:intergenic
TAACAAACCAAATCTAATTC+AGG 0.371361 8_1:+64648356 None:intergenic
TCGGGACACGCATGGTATAT+GGG 0.373647 8_1:+64645300 None:intergenic
AGCTTGGTGAAATCAGAAAA+AGG 0.385190 8_1:-64644484 Msa1207190:CDS
GAAGCTTAGCGCGCTGTTCA+TGG 0.386331 8_1:-64643577 Msa1207190:CDS
CCTTTCTCGAAAATGTATTC+CGG 0.393462 8_1:+64643538 None:intergenic
GGACTGAACCAACAAAGAAC+TGG 0.397018 8_1:-64646296 Msa1207190:CDS
CTCAATTTAGATCCATGTAT+AGG 0.397167 8_1:-64643181 Msa1207190:three_prime_UTR
TGGACGATTAGAGCTGGTTT+AGG 0.404354 8_1:-64642734 Msa1207190:three_prime_UTR
CTAAAACCCCATTGGAGAAT+GGG 0.407953 8_1:+64647990 None:intergenic
TTCACTGAACACACCTCAAA+TGG 0.408067 8_1:+64644869 None:intergenic
ATTGTGTTATGAACAAGAAT+GGG 0.409285 8_1:+64648079 None:intergenic
ACTTGATCAAGATAATATTC+AGG 0.409288 8_1:+64645266 None:intergenic
TATTGCACTTACTTTAGAAT+AGG 0.412673 8_1:+64648174 None:intergenic
TGAAATGAAGGTATGATAAG+TGG 0.412997 8_1:+64648223 None:intergenic
GGCGTGCCAAAGAGGATTCA+TGG 0.413721 8_1:-64643511 Msa1207190:CDS
TTTGGTCCCTTTCAAGTTGG+TGG 0.420304 8_1:-64643252 Msa1207190:three_prime_UTR
TGTGATTCCCAAATATCAAT+TGG 0.422550 8_1:+64647148 None:intergenic
GGAACTGACGCCGAAATAAA+CGG 0.425295 8_1:-64643348 Msa1207190:CDS
GAGAATTGCAAGAGCAACTT+TGG 0.426387 8_1:-64643270 Msa1207190:three_prime_UTR
TAGTTCATCATCAAGGTCAT+TGG 0.428900 8_1:+64645008 None:intergenic
CCCACTTCATGAGGAGTAAG+AGG 0.434476 8_1:+64643994 None:intergenic
GTTCATGGCGAGGCATGAAA+TGG 0.434734 8_1:-64643562 Msa1207190:CDS
TGATTTCATTCATTGCCAAT+TGG 0.435248 8_1:-64648324 Msa1207190:five_prime_UTR
AGAGGATTCATGGGAGAGCC+AGG 0.436961 8_1:-64643501 Msa1207190:CDS
GAAAATGAAACAAGACCAAT+TGG 0.438044 8_1:+64648309 None:intergenic
CATCTCCTTTGTATAGATGT+TGG 0.438548 8_1:+64643864 None:intergenic
AATTGTGTTATGAACAAGAA+TGG 0.439173 8_1:+64648078 None:intergenic
GTTATATAGCAGTCCATTTG+AGG 0.440662 8_1:-64644882 Msa1207190:intron
CACGCTTTCGTTCTCCGTCA+GGG 0.449075 8_1:+64644025 None:intergenic
ACATACCTGTATGTTGCATC+GGG 0.449719 8_1:-64643937 Msa1207190:CDS
AATAATGCCACCAACTTGAA+AGG 0.450326 8_1:+64643245 None:intergenic
CGTCCAGCTTTCATCTCTCC+TGG 0.453678 8_1:+64643483 None:intergenic
TTCATTGTGAGCTCAGCTAT+AGG 0.454563 8_1:-64643096 Msa1207190:intron
AACATGGCCAGGATTCTTGC+TGG 0.456728 8_1:-64643733 Msa1207190:CDS
TCTAAAACCCCATTGGAGAA+TGG 0.456883 8_1:+64647989 None:intergenic
CACATACCTGTATGTTGCAT+CGG 0.462028 8_1:-64643938 Msa1207190:CDS
GCATTTAGAAATCTGACAAT+AGG 0.464250 8_1:-64643369 Msa1207190:CDS
GAAATGAAGGTATGATAAGT+GGG 0.465770 8_1:+64648224 None:intergenic
ACGTTGTTTCTCATCTTGAA+TGG 0.468318 8_1:-64647773 Msa1207190:CDS
CAGGTTTGAGCCAGATATGC+TGG 0.469168 8_1:-64644552 Msa1207190:CDS
TATTCAGGATCTGATTTCCT+CGG 0.470623 8_1:+64645281 None:intergenic
AGATTTCTAAATGCGAGCTT+AGG 0.471285 8_1:+64643378 None:intergenic
ATACGCGAGCGCATGTCAAA+TGG 0.471651 8_1:-64646344 Msa1207190:CDS
AGATAAGGTCATGCGGTCAA+TGG 0.476341 8_1:-64645330 Msa1207190:CDS
TATAAATAATAATGAAATGA+AGG 0.476717 8_1:+64648211 None:intergenic
CCTTTGACCAGCAAGAATCC+TGG 0.479961 8_1:+64643726 None:intergenic
GTTGGTGGCATTATTAAACT+TGG 0.480356 8_1:-64643237 Msa1207190:three_prime_UTR
ACAATGCCCCATTCTCCAAT+GGG 0.481367 8_1:-64647997 Msa1207190:five_prime_UTR
CTACTACGGATGCAAAGAAA+GGG 0.482045 8_1:-64647113 Msa1207190:CDS
TTCTTCAAGTGCAACGATGA+TGG 0.486237 8_1:-64642886 Msa1207190:three_prime_UTR
TTCTCACAGACACAAGTGCT+TGG 0.492215 8_1:+64643441 None:intergenic
GTAATCAACAGCAGCTAGGC+GGG 0.492518 8_1:+64643801 None:intergenic
CGGGACACGCATGGTATATG+GGG 0.492983 8_1:+64645301 None:intergenic
TTCAAAATCTAAAACCCCAT+TGG 0.495443 8_1:+64647982 None:intergenic
ACTACTACGGATGCAAAGAA+AGG 0.497464 8_1:-64647114 Msa1207190:CDS
CACTTACTTTAGAATAGGAT+CGG 0.498801 8_1:+64648179 None:intergenic
ATTCAGGATCTGATTTCCTC+GGG 0.501133 8_1:+64645282 None:intergenic
AAAAGGTTTCAATTCTTCCT+CGG 0.501153 8_1:+64643837 None:intergenic
AATTGAGTGAAGATGGAATC+CGG 0.501267 8_1:-64643404 Msa1207190:CDS
ATAATGCCACCAACTTGAAA+GGG 0.502180 8_1:+64643246 None:intergenic
TGTAATGAGGATGCGAAAGA+TGG 0.508686 8_1:-64644911 Msa1207190:CDS
AACTTTGGTCCCTTTCAAGT+TGG 0.509880 8_1:-64643255 Msa1207190:three_prime_UTR
TTGTTATGGCTTGAACGGAT+TGG 0.510891 8_1:-64642799 Msa1207190:three_prime_UTR
GTATGTAACAGGCGATATAT+GGG 0.511833 8_1:-64643630 Msa1207190:intron
ATAGACGAATTGAGTGAAGA+TGG 0.512145 8_1:-64643411 Msa1207190:CDS
TAAATGCGAGCTTAGGTGGC+CGG 0.513190 8_1:+64643385 None:intergenic
ATTCCATGGTCGGTCATTTG+CGG 0.516284 8_1:-64647840 Msa1207190:CDS
GAGCCAGGAGAGATGAAAGC+TGG 0.520156 8_1:-64643486 Msa1207190:CDS
ACCCGTCGTCTCAAGAGTAT+TGG 0.523710 8_1:+64645239 None:intergenic
ACAACAACGGTAACATGGCC+AGG 0.529185 8_1:-64643744 Msa1207190:CDS
CGGGAAGAGAATGAAAGAAA+AGG 0.531327 8_1:+64643820 None:intergenic
GCTTATATCAATCTCGGCAA+TGG 0.532044 8_1:-64642754 Msa1207190:three_prime_UTR
TACAATGCCCCATTCTCCAA+TGG 0.533480 8_1:-64647998 Msa1207190:five_prime_UTR
TGTTAAAAGAGTTCCAGATA+AGG 0.534714 8_1:-64645345 Msa1207190:CDS
ACAAAACCAATACGACAACT+TGG 0.536194 8_1:-64644943 Msa1207190:CDS
TTGCTTATTGCCGCGAGCGG+AGG 0.537115 8_1:-64646317 Msa1207190:CDS
GGTTTGATGCTGCGAGCGCT+TGG 0.537934 8_1:-64643973 Msa1207190:CDS
CCAATTAACATCGAAAATGT+TGG 0.538007 8_1:+64645400 None:intergenic
TCCTCTTACTCCTCATGAAG+TGG 0.539526 8_1:-64643995 Msa1207190:CDS
CCTCTTACTCCTCATGAAGT+GGG 0.541378 8_1:-64643994 Msa1207190:CDS
TTTCTAAATGCGAGCTTAGG+TGG 0.543183 8_1:+64643381 None:intergenic
TTCGAGATCCATTCCATGGT+CGG 0.545811 8_1:-64647850 Msa1207190:CDS
GACTGAACCAACAAAGAACT+GGG 0.546290 8_1:-64646295 Msa1207190:CDS
GCCAATACTCTTGAGACGAC+GGG 0.549625 8_1:-64645240 Msa1207190:intron
CCAGGATTCTTGCTGGTCAA+AGG 0.549818 8_1:-64643726 Msa1207190:intron
ATGTGGGCTTATATCAATCT+CGG 0.550508 8_1:-64642760 Msa1207190:three_prime_UTR
TTGGTTCAGTCCTCCGCTCG+CGG 0.550953 8_1:+64646307 None:intergenic
GCACTTGGTTTGAGTCATGT+TGG 0.551582 8_1:+64642944 None:intergenic
CATATCTATAAACATTTGCA+AGG 0.551643 8_1:+64643132 None:intergenic
TCAAATGGACTGCTATATAA+CGG 0.554034 8_1:+64644884 None:intergenic
GCAAATGACCGACCATGGAA+TGG 0.559030 8_1:+64647842 None:intergenic
TACGTACTTTCCCCTATACA+TGG 0.559264 8_1:+64643169 None:intergenic
TGGCGAGGCATGAAATGGAC+CGG 0.559422 8_1:-64643557 Msa1207190:CDS
CGGCAATGGACGATTAGAGC+TGG 0.559423 8_1:-64642740 Msa1207190:three_prime_UTR
GATGATGGTCTCTATTTCAT+CGG 0.560662 8_1:-64642871 Msa1207190:three_prime_UTR
GTTAGAGTGAGTGTGGTTCG+TGG 0.562414 8_1:+64647890 None:intergenic
TCTCCTTTGTATAGATGTTG+GGG 0.562630 8_1:+64643866 None:intergenic
GAGCTCCAGCTTGCTGTAGG+TGG 0.563803 8_1:+64642915 None:intergenic
AAACCGCAAATGACCGACCA+TGG 0.565822 8_1:+64647837 None:intergenic
CAATATTCTAAATACTACTA+CGG 0.567932 8_1:-64647127 Msa1207190:CDS
TGTAGGTGGTATAATGCACT+TGG 0.570011 8_1:+64642929 None:intergenic
GCGTGCCAAAGAGGATTCAT+GGG 0.571444 8_1:-64643510 Msa1207190:CDS
CTGATGCTGTTGTTGTTGCA+CGG 0.572212 8_1:-64645635 Msa1207190:CDS
AATCTTGTTATATGCTGTGA+TGG 0.573882 8_1:-64643204 Msa1207190:three_prime_UTR
CCGCAGTTTCTTCTCTACAC+TGG 0.574458 8_1:-64647730 Msa1207190:intron
CAATGTAATCAACAGCAGCT+AGG 0.577338 8_1:+64643797 None:intergenic
AAGATCTCTGAGAGGCTGCA+TGG 0.577808 8_1:+64643891 None:intergenic
TTAGCGCGCTGTTCATGGCG+AGG 0.577856 8_1:-64643572 Msa1207190:CDS
TGCTAACAACAACGGTAACA+TGG 0.579524 8_1:-64643749 Msa1207190:CDS
GCGTCACATGAGGCTACATG+TGG 0.581233 8_1:-64642777 Msa1207190:three_prime_UTR
TGGAATGGATCTCGAACAGA+TGG 0.584319 8_1:+64647857 None:intergenic
TACTTGCTTATTGCCGCGAG+CGG 0.584367 8_1:-64646320 Msa1207190:CDS
GAAGAGCTCCAGCTTGCTGT+AGG 0.585222 8_1:+64642912 None:intergenic
GAACGGATTGGCGTCACATG+AGG 0.585749 8_1:-64642787 Msa1207190:three_prime_UTR
TTTGTGACAAAACCCCAAAT+GGG 0.586008 8_1:-64647936 Msa1207190:exon
AAGATGAGAAACAACGTGAC+CGG 0.587152 8_1:+64647779 None:intergenic
TTGTGTTATGAACAAGAATG+GGG 0.587821 8_1:+64648080 None:intergenic
GGAGAGATGAAAGCTGGACG+AGG 0.589299 8_1:-64643480 Msa1207190:CDS
TTATACCACCTACAGCAAGC+TGG 0.590274 8_1:-64642920 Msa1207190:three_prime_UTR
TGCCAATACTCTTGAGACGA+CGG 0.593501 8_1:-64645241 Msa1207190:CDS
TCTGTTCGAGATCCATTCCA+TGG 0.594173 8_1:-64647854 Msa1207190:CDS
AGCATCAAACCCACTTCATG+AGG 0.596281 8_1:+64643985 None:intergenic
TAAAACCCCATTGGAGAATG+GGG 0.597995 8_1:+64647991 None:intergenic
AAGCCATAACAAAACGACCT+TGG 0.599910 8_1:+64642810 None:intergenic
CAGAGAACTATGAATACGAA+AGG 0.603495 8_1:+64648287 None:intergenic
TGATTTCCTCGGGACACGCA+TGG 0.609508 8_1:+64645292 None:intergenic
ATACAGGATTTGAGCCCTGA+CGG 0.612438 8_1:-64644039 Msa1207190:intron
GACTTCACCACACCCATTTG+GGG 0.613598 8_1:+64647924 None:intergenic
AAATGAAGGTATGATAAGTG+GGG 0.614612 8_1:+64648225 None:intergenic
CACACTTGTTGTACCTGAGT+TGG 0.618209 8_1:-64645601 Msa1207190:CDS
ATACCTGTATGTTGCATCGG+GGG 0.619931 8_1:-64643935 Msa1207190:CDS
AAAGAATTATGATCCAACTC+AGG 0.620218 8_1:+64645588 None:intergenic
AAGGTAAAGGCGTGCCAAAG+AGG 0.620555 8_1:-64643519 Msa1207190:CDS
TTTCCCCAACATCTATACAA+AGG 0.622108 8_1:-64643869 Msa1207190:CDS
CAATTTAGATCCATGTATAG+GGG 0.626244 8_1:-64643179 Msa1207190:three_prime_UTR
CCTGACGGAGAACGAAAGCG+TGG 0.628749 8_1:-64644024 Msa1207190:CDS
GAGAATGGGGCATTGTAGTG+TGG 0.634336 8_1:+64648004 None:intergenic
GTATTTGTTGCTAACAACAA+CGG 0.634873 8_1:-64643757 Msa1207190:CDS
GACAAAACCCCAAATGGGTG+TGG 0.644598 8_1:-64647931 Msa1207190:exon
AAATGGGTGTGGTGAAGTCG+TGG 0.645174 8_1:-64647920 Msa1207190:CDS
TACAAAGGAGATGCTTGCCG+AGG 0.652331 8_1:-64643854 Msa1207190:CDS
CATATACCATGCGTGTCCCG+AGG 0.654449 8_1:-64645298 Msa1207190:CDS
TGTAATCAACAGCAGCTAGG+CGG 0.658178 8_1:+64643800 None:intergenic
ATATCTATAAACATTTGCAA+GGG 0.665419 8_1:+64643133 None:intergenic
AATGAAGGTATGATAAGTGG+GGG 0.670531 8_1:+64648226 None:intergenic
CGTCACATGAGGCTACATGT+GGG 0.672293 8_1:-64642776 Msa1207190:three_prime_UTR
CAACTCAGGTACAACAAGTG+TGG 0.676378 8_1:+64645602 None:intergenic
TACTACGGATGCAAAGAAAG+GGG 0.685798 8_1:-64647112 Msa1207190:CDS
TCAAAGCATGATAATTAACA+CGG 0.686663 8_1:+64644971 None:intergenic
CTGACGGAGAACGAAAGCGT+GGG 0.689450 8_1:-64644023 Msa1207190:CDS
GAGTTCCAGATAAGGTCATG+CGG 0.704682 8_1:-64645337 Msa1207190:CDS
CAATGCCCCATTCTCCAATG+GGG 0.710397 8_1:-64647996 Msa1207190:five_prime_UTR
GGGACACGCATGGTATATGG+GGG 0.711401 8_1:+64645302 None:intergenic
CATACCTGTATGTTGCATCG+GGG 0.711632 8_1:-64643936 Msa1207190:CDS
TTGGGGAAAAGATCTCTGAG+AGG 0.727453 8_1:+64643883 None:intergenic
ACTGACGCCGAAATAAACGG+AGG 0.750065 8_1:-64643345 Msa1207190:CDS
CCAGTGTAGAGAAGAAACTG+CGG 0.760750 8_1:+64647730 None:intergenic
ACTGAACCAACAAAGAACTG+GGG 0.763615 8_1:-64646294 Msa1207190:intron
ATGTGTGTACGAGATGACCA+AGG 0.776685 8_1:-64642827 Msa1207190:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATAATAATGAAATGA+AGG + chr8_1:64642851-64642870 None:intergenic 10.0%
!! TAACATAATAATGAATAAAA+GGG + chr8_1:64643368-64643387 None:intergenic 10.0%
!! TATATATAACATAATTAGAA+AGG + chr8_1:64644489-64644508 None:intergenic 10.0%
!! AAATAAAACAAAGTATAAAA+TGG + chr8_1:64644601-64644620 None:intergenic 10.0%
!!! TTGTGTAAAAATATAATTTT+AGG - chr8_1:64646761-64646780 Msa1207190:intron 10.0%
!!! TTATATTAATTTTTCAAACA+AGG + chr8_1:64647374-64647393 None:intergenic 10.0%
!!! ATATAAATTTTGTTTGATAA+AGG - chr8_1:64647388-64647407 Msa1207190:intron 10.0%
!! GTAACATAATAATGAATAAA+AGG + chr8_1:64643369-64643388 None:intergenic 15.0%
!! CAATCAATATATAATTAGAA+AGG + chr8_1:64644457-64644476 None:intergenic 15.0%
!! AATATTAACAAATTGTCTAT+GGG + chr8_1:64644625-64644644 None:intergenic 15.0%
!!! ATAGACAATTTGTTAATATT+GGG - chr8_1:64644625-64644644 Msa1207190:intron 15.0%
!! GAAATAACATTACTTTAATT+TGG + chr8_1:64645368-64645387 None:intergenic 15.0%
!!! TTAAAGTAATGTTATTTCTA+TGG - chr8_1:64645370-64645389 Msa1207190:CDS 15.0%
!!! AATTTGCATATTGTTTTATA+CGG - chr8_1:64645511-64645530 Msa1207190:intron 15.0%
!! AGTTATAATGTATTACAAAA+AGG + chr8_1:64645596-64645615 None:intergenic 15.0%
!!! AAAAATATAATTTTAGGTGT+TGG - chr8_1:64646767-64646786 Msa1207190:intron 15.0%
!!! ATTAGATTTGGTTTGTTATT+CGG - chr8_1:64642708-64642727 Msa1207190:three_prime_UTR 20.0%
!!! TGTAATTGATGTGAATTTTT+TGG - chr8_1:64643867-64643886 Msa1207190:CDS 20.0%
!! CAATATTCTAAATACTACTA+CGG - chr8_1:64643932-64643951 Msa1207190:CDS 20.0%
!!! AATGAAAATGACTCAAATTT+TGG + chr8_1:64644091-64644110 None:intergenic 20.0%
!! CAATATTAACAAATTGTCTA+TGG + chr8_1:64644626-64644645 None:intergenic 20.0%
!!! CATAGACAATTTGTTAATAT+TGG - chr8_1:64644624-64644643 Msa1207190:intron 20.0%
!! ATGGATAAGTTTAATGTATA+TGG - chr8_1:64644862-64644881 Msa1207190:intron 20.0%
!! TATCAAATTATTATCGATGT+CGG + chr8_1:64645122-64645141 None:intergenic 20.0%
!! GATAAAATCACATAATTCAA+TGG - chr8_1:64645138-64645157 Msa1207190:intron 20.0%
!!! TAATTGGTTCATTAATTATC+TGG - chr8_1:64645675-64645694 Msa1207190:intron 20.0%
!! AAATTTAAATTCCATACACA+AGG + chr8_1:64646216-64646235 None:intergenic 20.0%
!!! TTAAATTTAACTTCCATCAA+AGG - chr8_1:64646228-64646247 Msa1207190:intron 20.0%
!! CATTATAATAGCAATATGTA+AGG - chr8_1:64646438-64646457 Msa1207190:intron 20.0%
!!! AGTAGTTTTTCAAAATAATC+TGG - chr8_1:64646873-64646892 Msa1207190:intron 20.0%
!!! ATATAACAAGATTTTCATCA+TGG + chr8_1:64647848-64647867 None:intergenic 20.0%
!! ATATCTATAAACATTTGCAA+GGG + chr8_1:64647929-64647948 None:intergenic 20.0%
! TAACAAACCAAATCTAATTC+AGG + chr8_1:64642706-64642725 None:intergenic 25.0%
!!! TATTGCACTTACTTTAGAAT+AGG + chr8_1:64642888-64642907 None:intergenic 25.0%
! ATTGTGTTATGAACAAGAAT+GGG + chr8_1:64642983-64643002 None:intergenic 25.0%
! AATTGTGTTATGAACAAGAA+TGG + chr8_1:64642984-64643003 None:intergenic 25.0%
! GAAAAAGGAATCTTGATTTA+GGG + chr8_1:64643015-64643034 None:intergenic 25.0%
! AGAAAAAGGAATCTTGATTT+AGG + chr8_1:64643016-64643035 None:intergenic 25.0%
!! ATTGATGAAGATTTTGTGTT+TGG - chr8_1:64643099-64643118 Msa1207190:three_prime_UTR 25.0%
! CATATAAGTGCTTATGTATA+AGG - chr8_1:64643452-64643471 Msa1207190:CDS 25.0%
! CATCAATTACACAACATATT+TGG + chr8_1:64643858-64643877 None:intergenic 25.0%
!!! ATTGATGTGAATTTTTTGGT+AGG - chr8_1:64643871-64643890 Msa1207190:CDS 25.0%
!! TTGTGTTTGCTAACTAAAAA+TGG - chr8_1:64644010-64644029 Msa1207190:CDS 25.0%
! AAAATCATACATACATGTCA+AGG + chr8_1:64644038-64644057 None:intergenic 25.0%
!! ATCAGTCTAAAATTACCATT+AGG + chr8_1:64644182-64644201 None:intergenic 25.0%
!!! GTAATTTTAGACTGATTTCA+AGG - chr8_1:64644186-64644205 Msa1207190:intron 25.0%
! AATAATATCTTCACTGCTTT+AGG - chr8_1:64644278-64644297 Msa1207190:intron 25.0%
! TATATATATTGCTTCAAAGC+CGG - chr8_1:64644503-64644522 Msa1207190:CDS 25.0%
! TTCTATCTCATTATGGTAAT+TGG - chr8_1:64644678-64644697 Msa1207190:intron 25.0%
! GATAAGTTTAATGTATATGG+AGG - chr8_1:64644865-64644884 Msa1207190:intron 25.0%
!! TTTTCTTGATTTCAATCAGT+AGG + chr8_1:64644908-64644927 None:intergenic 25.0%
!! TACTGATTGAAATCAAGAAA+AGG - chr8_1:64644907-64644926 Msa1207190:CDS 25.0%
! TCTTCAAAAACAACTGAAAA+AGG + chr8_1:64644965-64644984 None:intergenic 25.0%
! TGTCTTAATTAGATTACACT+AGG + chr8_1:64645308-64645327 None:intergenic 25.0%
!! AGTTGGATCATAATTCTTTT+TGG - chr8_1:64645475-64645494 Msa1207190:intron 25.0%
! ACTTGATCAAGATAATATTC+AGG + chr8_1:64645796-64645815 None:intergenic 25.0%
! TCAAAGCATGATAATTAACA+CGG + chr8_1:64646091-64646110 None:intergenic 25.0%
! TTGGTCAAAAAATTGTAATG+AGG - chr8_1:64646135-64646154 Msa1207190:intron 25.0%
! TCATGATCTATGATGATTTA+TGG - chr8_1:64646482-64646501 Msa1207190:intron 25.0%
!!! GGTAAAGAAATAACTAGTTT+TGG + chr8_1:64646965-64646984 None:intergenic 25.0%
! TCAATTTAGATCCATGTATA+GGG - chr8_1:64647879-64647898 Msa1207190:CDS 25.0%
! CATATCTATAAACATTTGCA+AGG + chr8_1:64647930-64647949 None:intergenic 25.0%
! TATTTAGTATTTAAGTCGTC+AGG + chr8_1:64648052-64648071 None:intergenic 25.0%
! GACGACTTAAATACTAAATA+TGG - chr8_1:64648052-64648071 Msa1207190:five_prime_UTR 25.0%
TGATTTCATTCATTGCCAAT+TGG - chr8_1:64642735-64642754 Msa1207190:three_prime_UTR 30.0%
GAAAATGAAACAAGACCAAT+TGG + chr8_1:64642753-64642772 None:intergenic 30.0%
! AAATGAAGGTATGATAAGTG+GGG + chr8_1:64642837-64642856 None:intergenic 30.0%
! GAAATGAAGGTATGATAAGT+GGG + chr8_1:64642838-64642857 None:intergenic 30.0%
! TGAAATGAAGGTATGATAAG+TGG + chr8_1:64642839-64642858 None:intergenic 30.0%
!! CACTTACTTTAGAATAGGAT+CGG + chr8_1:64642883-64642902 None:intergenic 30.0%
!! ATGGGGATTTTGGTATTTTT+TGG + chr8_1:64642965-64642984 None:intergenic 30.0%
TTGTGTTATGAACAAGAATG+GGG + chr8_1:64642982-64643001 None:intergenic 30.0%
! CTCAAGTCTTTAGAAGAAAA+AGG + chr8_1:64643030-64643049 None:intergenic 30.0%
! TTCAAAATCTAAAACCCCAT+TGG + chr8_1:64643080-64643099 None:intergenic 30.0%
! AACATAATGGCTTAAGGTTT+TGG - chr8_1:64643720-64643739 Msa1207190:intron 30.0%
! ACATAATGGCTTAAGGTTTT+GGG - chr8_1:64643721-64643740 Msa1207190:intron 30.0%
!!! ATGTGAATTTTTTGGTAGGA+TGG - chr8_1:64643875-64643894 Msa1207190:CDS 30.0%
TGTGATTCCCAAATATCAAT+TGG + chr8_1:64643914-64643933 None:intergenic 30.0%
!! ATGAAGCTTTATTTGCCTAA+TGG - chr8_1:64644164-64644183 Msa1207190:intron 30.0%
TTAGGATAGATTACATCAGT+AGG - chr8_1:64644296-64644315 Msa1207190:intron 30.0%
TGAGTTTAGATCATGTTAAG+GGG + chr8_1:64644394-64644413 None:intergenic 30.0%
CTGAGTTTAGATCATGTTAA+GGG + chr8_1:64644395-64644414 None:intergenic 30.0%
ACTGAGTTTAGATCATGTTA+AGG + chr8_1:64644396-64644415 None:intergenic 30.0%
TTAACATGATCTAAACTCAG+TGG - chr8_1:64644395-64644414 Msa1207190:intron 30.0%
! ATTTTCTCATAGCAGTGTAA+TGG + chr8_1:64644569-64644588 None:intergenic 30.0%
!! TGTCACTTTCTATCTCATTA+TGG - chr8_1:64644671-64644690 Msa1207190:intron 30.0%
AAAGAATTATGATCCAACTC+AGG + chr8_1:64645474-64645493 None:intergenic 30.0%
! GGATCATAATTCTTTTTGGA+AGG - chr8_1:64645479-64645498 Msa1207190:intron 30.0%
GAAGTCACTGTATTACAAAA+AGG + chr8_1:64645638-64645657 None:intergenic 30.0%
CCAATTAACATCGAAAATGT+TGG + chr8_1:64645662-64645681 None:intergenic 30.0%
! CCAACATTTTCGATGTTAAT+TGG - chr8_1:64645659-64645678 Msa1207190:intron 30.0%
TGTTAAAAGAGTTCCAGATA+AGG - chr8_1:64645714-64645733 Msa1207190:intron 30.0%
!! TCAGTTTTGATAACTCCTTT+TGG - chr8_1:64645953-64645972 Msa1207190:intron 30.0%
!! CAGATTTTTCGGTATTTTAC+AGG - chr8_1:64645995-64646014 Msa1207190:intron 30.0%
! GTTTTTGTAGTTCATCATCA+AGG + chr8_1:64646061-64646080 None:intergenic 30.0%
!! TCAAATGGACTGCTATATAA+CGG + chr8_1:64646178-64646197 None:intergenic 30.0%
TATAGGGATGAGATCATATA+TGG + chr8_1:64646306-64646325 None:intergenic 30.0%
GATAAAGGAGTTGTGAAAAT+GGG + chr8_1:64646358-64646377 None:intergenic 30.0%
TGATAAAGGAGTTGTGAAAA+TGG + chr8_1:64646359-64646378 None:intergenic 30.0%
TCAATTTCAGACAGTGATAA+AGG + chr8_1:64646373-64646392 None:intergenic 30.0%
GATCATGAGAATTCAAACAT+TGG + chr8_1:64646470-64646489 None:intergenic 30.0%
!!! GCATTTTCAGGTTGTTATTT+TGG - chr8_1:64646529-64646548 Msa1207190:intron 30.0%
!!! TTTTCAGGTTGTTATTTTGG+TGG - chr8_1:64646532-64646551 Msa1207190:intron 30.0%
!!! TTTCAGGTTGTTATTTTGGT+GGG - chr8_1:64646533-64646552 Msa1207190:intron 30.0%
! GTTTTGTCAGTAGAAATCAT+AGG + chr8_1:64646629-64646648 None:intergenic 30.0%
TATTGTCAGTGGAAATGATA+TGG + chr8_1:64646651-64646670 None:intergenic 30.0%
TGTATTATTGCAAGAGGTAA+TGG + chr8_1:64647005-64647024 None:intergenic 30.0%
ATTACCTCTTGCAATAATAC+AGG - chr8_1:64647004-64647023 Msa1207190:intron 30.0%
AAATCCTGTATTATTGCAAG+AGG + chr8_1:64647011-64647030 None:intergenic 30.0%
ATCTCCTTTGTATAGATGTT+GGG + chr8_1:64647197-64647216 None:intergenic 30.0%
AAAAGGTTTCAATTCTTCCT+CGG + chr8_1:64647225-64647244 None:intergenic 30.0%
! GTATTTGTTGCTAACAACAA+CGG - chr8_1:64647302-64647321 Msa1207190:intron 30.0%
GATTTCTTCTTGTATGTAAC+AGG - chr8_1:64647418-64647437 Msa1207190:intron 30.0%
!! TACATTTTCGAGAAAGGTAA+AGG - chr8_1:64647527-64647546 Msa1207190:intron 30.0%
TCACTCAATTCGTCTATAAA+TGG + chr8_1:64647645-64647664 None:intergenic 30.0%
TTCATTTCCTCCGTTTATTT+CGG + chr8_1:64647724-64647743 None:intergenic 30.0%
GCTTAATATGTTCTCTCATT+TGG + chr8_1:64647768-64647787 None:intergenic 30.0%
! AATCTTGTTATATGCTGTGA+TGG - chr8_1:64647855-64647874 Msa1207190:CDS 30.0%
CTCAATTTAGATCCATGTAT+AGG - chr8_1:64647878-64647897 Msa1207190:CDS 30.0%
CAATTTAGATCCATGTATAG+GGG - chr8_1:64647880-64647899 Msa1207190:CDS 30.0%
CAGAGAACTATGAATACGAA+AGG + chr8_1:64642775-64642794 None:intergenic 35.0%
! AATGAAGGTATGATAAGTGG+GGG + chr8_1:64642836-64642855 None:intergenic 35.0%
! ATGAACAAGAATGGGGATTT+TGG + chr8_1:64642975-64642994 None:intergenic 35.0%
! TTTTGTGACAAAACCCCAAA+TGG - chr8_1:64643122-64643141 Msa1207190:three_prime_UTR 35.0%
TTTGTGACAAAACCCCAAAT+GGG - chr8_1:64643123-64643142 Msa1207190:three_prime_UTR 35.0%
! ATTTGCGGTTTCATGCTTTT+CGG - chr8_1:64643234-64643253 Msa1207190:three_prime_UTR 35.0%
! GGTCTCATTTCTCTTTTAAC+CGG - chr8_1:64643261-64643280 Msa1207190:three_prime_UTR 35.0%
!! ACGTTGTTTCTCATCTTGAA+TGG - chr8_1:64643286-64643305 Msa1207190:exon 35.0%
!! TGCTTTTTGTATTGCCAATG+TGG - chr8_1:64643400-64643419 Msa1207190:CDS 35.0%
ATTCCTATTGTAGACCACAT+TGG + chr8_1:64643417-64643436 None:intergenic 35.0%
CTTATTTCCATAAGTGCTAC+AGG + chr8_1:64643537-64643556 None:intergenic 35.0%
GAGAAGACTCACAAACATAA+TGG - chr8_1:64643707-64643726 Msa1207190:intron 35.0%
CTCACAAACATAATGGCTTA+AGG - chr8_1:64643714-64643733 Msa1207190:intron 35.0%
!!! TAAGGTTTTGGGTAAAGATG+TGG - chr8_1:64643732-64643751 Msa1207190:CDS 35.0%
TGGTGTACAATTCACTTGTA+TGG - chr8_1:64643752-64643771 Msa1207190:CDS 35.0%
ATTCACTTGTATGGTTGCTT+TGG - chr8_1:64643761-64643780 Msa1207190:CDS 35.0%
! TTCACTTGTATGGTTGCTTT+GGG - chr8_1:64643762-64643781 Msa1207190:CDS 35.0%
AAACTTATCTACTGACGACT+GGG + chr8_1:64643823-64643842 None:intergenic 35.0%
TAAACTTATCTACTGACGAC+TGG + chr8_1:64643824-64643843 None:intergenic 35.0%
ATCATGCGCCAATTGATATT+TGG - chr8_1:64643903-64643922 Msa1207190:CDS 35.0%
TCATGCGCCAATTGATATTT+GGG - chr8_1:64643904-64643923 Msa1207190:CDS 35.0%
AAAAACAGCACATAGCAACA+TGG + chr8_1:64644226-64644245 None:intergenic 35.0%
!! GATTTTTAATTACACCGTCG+TGG - chr8_1:64644839-64644858 Msa1207190:intron 35.0%
TTAAACTTATCCATCCACGA+CGG + chr8_1:64644856-64644875 None:intergenic 35.0%
!!! AGTTGTTTTTGAAGAATGCG+AGG - chr8_1:64644970-64644989 Msa1207190:CDS 35.0%
!! CTAGTTCTATCGATATCATC+AGG + chr8_1:64645023-64645042 None:intergenic 35.0%
TGGAATCATATGTGTCATGT+CGG - chr8_1:64645158-64645177 Msa1207190:intron 35.0%
CACTAGGCTCTATTAACAAT+AGG + chr8_1:64645292-64645311 None:intergenic 35.0%
!! ATTCTTTTTGGAAGGATGAC+AGG - chr8_1:64645487-64645506 Msa1207190:intron 35.0%
TATTCAGGATCTGATTTCCT+CGG + chr8_1:64645781-64645800 None:intergenic 35.0%
!!! CTCCTTTTGGAATTCAATTG+TGG - chr8_1:64645966-64645985 Msa1207190:intron 35.0%
CACCACAATTGAATTCCAAA+AGG + chr8_1:64645971-64645990 None:intergenic 35.0%
!!! CTTTTGGAATTCAATTGTGG+TGG - chr8_1:64645969-64645988 Msa1207190:intron 35.0%
! TGTGGTGGTAACAGATTTTT+CGG - chr8_1:64645984-64646003 Msa1207190:intron 35.0%
TAGTTCATCATCAAGGTCAT+TGG + chr8_1:64646054-64646073 None:intergenic 35.0%
ACAAAACCAATACGACAACT+TGG - chr8_1:64646116-64646135 Msa1207190:intron 35.0%
! TTTTGACCAAGTTGTCGTAT+TGG + chr8_1:64646125-64646144 None:intergenic 35.0%
GTTATATAGCAGTCCATTTG+AGG - chr8_1:64646177-64646196 Msa1207190:intron 35.0%
TGGACAACATGTATGTCATA+AGG + chr8_1:64646286-64646305 None:intergenic 35.0%
! GATCTCATCCCTATATCTTT+TGG - chr8_1:64646311-64646330 Msa1207190:CDS 35.0%
CAGACACACCAAAAGATATA+GGG + chr8_1:64646322-64646341 None:intergenic 35.0%
TCTATGATGATTTATGGCAC+AGG - chr8_1:64646488-64646507 Msa1207190:intron 35.0%
!!! TTCAGGTTGTTATTTTGGTG+GGG - chr8_1:64646534-64646553 Msa1207190:intron 35.0%
GAAAAAGAAAGACAAGAGCT+TGG - chr8_1:64646559-64646578 Msa1207190:intron 35.0%
! AGCTTGGTGAAATCAGAAAA+AGG - chr8_1:64646575-64646594 Msa1207190:intron 35.0%
TTGGTGAAATCAGAAAAAGG+TGG - chr8_1:64646578-64646597 Msa1207190:intron 35.0%
! TCATAGGATTGTAGTCTTAC+AGG + chr8_1:64646613-64646632 None:intergenic 35.0%
AAAGGAGAAACTATTGTCAG+TGG + chr8_1:64646662-64646681 None:intergenic 35.0%
! TTTCTCCTTTTATCACCCAT+GGG - chr8_1:64646672-64646691 Msa1207190:intron 35.0%
AATAGATCCTTGAACAAGTC+AGG + chr8_1:64646706-64646725 None:intergenic 35.0%
!!! GGTGTTGGTTTTATAAGTAG+AGG - chr8_1:64646782-64646801 Msa1207190:intron 35.0%
ATGGCTCATTCACTTGATAT+TGG + chr8_1:64646986-64647005 None:intergenic 35.0%
TTTCCCCAACATCTATACAA+AGG - chr8_1:64647190-64647209 Msa1207190:intron 35.0%
TCTCCTTTGTATAGATGTTG+GGG + chr8_1:64647196-64647215 None:intergenic 35.0%
CATCTCCTTTGTATAGATGT+TGG + chr8_1:64647198-64647217 None:intergenic 35.0%
TGTATGTAACAGGCGATATA+TGG - chr8_1:64647428-64647447 Msa1207190:intron 35.0%
GTATGTAACAGGCGATATAT+GGG - chr8_1:64647429-64647448 Msa1207190:intron 35.0%
CTTCTTTGCATTTGGTCTAA+TGG + chr8_1:64647466-64647485 None:intergenic 35.0%
CCTTTCTCGAAAATGTATTC+CGG + chr8_1:64647524-64647543 None:intergenic 35.0%
ATAGACGAATTGAGTGAAGA+TGG - chr8_1:64647648-64647667 Msa1207190:intron 35.0%
AATTGAGTGAAGATGGAATC+CGG - chr8_1:64647655-64647674 Msa1207190:intron 35.0%
! TATGTTCTCTCATTTGGCTT+TGG + chr8_1:64647762-64647781 None:intergenic 35.0%
ATAATGCCACCAACTTGAAA+GGG + chr8_1:64647816-64647835 None:intergenic 35.0%
AATAATGCCACCAACTTGAA+AGG + chr8_1:64647817-64647836 None:intergenic 35.0%
!! GTTGGTGGCATTATTAAACT+TGG - chr8_1:64647822-64647841 Msa1207190:CDS 35.0%
! TGGGAGAATACTCAATTTTG+TGG + chr8_1:64648002-64648021 None:intergenic 35.0%
TCAGGTAATCCGTTACTAAA+CGG + chr8_1:64648034-64648053 None:intergenic 35.0%
! GATGATGGTCTCTATTTCAT+CGG - chr8_1:64648188-64648207 Msa1207190:five_prime_UTR 35.0%
!! TCGTTTTGTTATGGCTTGAA+CGG - chr8_1:64648255-64648274 Msa1207190:five_prime_UTR 35.0%
ATGTGGGCTTATATCAATCT+CGG - chr8_1:64648299-64648318 Msa1207190:five_prime_UTR 35.0%
TAAAACCCCATTGGAGAATG+GGG + chr8_1:64643071-64643090 None:intergenic 40.0%
CTAAAACCCCATTGGAGAAT+GGG + chr8_1:64643072-64643091 None:intergenic 40.0%
! TCTAAAACCCCATTGGAGAA+TGG + chr8_1:64643073-64643092 None:intergenic 40.0%
!!! TTTTGGTGTTAGAGTGAGTG+TGG + chr8_1:64643179-64643198 None:intergenic 40.0%
! TCTCGAACAGATGGCATTTT+TGG + chr8_1:64643196-64643215 None:intergenic 40.0%
! TTTGCGGTTTCATGCTTTTC+GGG - chr8_1:64643235-64643254 Msa1207190:three_prime_UTR 40.0%
AAGATGAGAAACAACGTGAC+CGG + chr8_1:64643283-64643302 None:intergenic 40.0%
TTGCCAATGTGGTCTACAAT+AGG - chr8_1:64643411-64643430 Msa1207190:CDS 40.0%
! GTGCTACAGGATAGCTTTTA+TGG + chr8_1:64643524-64643543 None:intergenic 40.0%
AAGCTATCCTGTAGCACTTA+TGG - chr8_1:64643527-64643546 Msa1207190:CDS 40.0%
CCTAGAGAATCATCCACATT+GGG + chr8_1:64643788-64643807 None:intergenic 40.0%
ACTACTACGGATGCAAAGAA+AGG - chr8_1:64643945-64643964 Msa1207190:CDS 40.0%
CTACTACGGATGCAAAGAAA+GGG - chr8_1:64643946-64643965 Msa1207190:CDS 40.0%
TACTACGGATGCAAAGAAAG+GGG - chr8_1:64643947-64643966 Msa1207190:CDS 40.0%
TAGCAACATGGAGACTTAGA+AGG + chr8_1:64644214-64644233 None:intergenic 40.0%
ACTAGAGACAGATGCAAATC+TGG - chr8_1:64644322-64644341 Msa1207190:intron 40.0%
GTTTAGATCATGTTAAGGGG+AGG + chr8_1:64644391-64644410 None:intergenic 40.0%
TAGTGTGACCTTGTTGAAAG+AGG - chr8_1:64644528-64644547 Msa1207190:CDS 40.0%
CATGAAAGCCTCTTTCAACA+AGG + chr8_1:64644539-64644558 None:intergenic 40.0%
CTTGTTGAAAGAGGCTTTCA+TGG - chr8_1:64644537-64644556 Msa1207190:CDS 40.0%
! TCATAGCAGTGTAATGGAAG+GGG + chr8_1:64644563-64644582 None:intergenic 40.0%
! CTCATAGCAGTGTAATGGAA+GGG + chr8_1:64644564-64644583 None:intergenic 40.0%
! TCTCATAGCAGTGTAATGGA+AGG + chr8_1:64644565-64644584 None:intergenic 40.0%
GACTGAACCAACAAAGAACT+GGG - chr8_1:64644764-64644783 Msa1207190:intron 40.0%
ACTGAACCAACAAAGAACTG+GGG - chr8_1:64644765-64644784 Msa1207190:intron 40.0%
TACTTACCCCAGTTCTTTGT+TGG + chr8_1:64644774-64644793 None:intergenic 40.0%
AACAAAGAACTGGGGTAAGT+AGG - chr8_1:64644773-64644792 Msa1207190:intron 40.0%
TTTAATTACACCGTCGTGGA+TGG - chr8_1:64644843-64644862 Msa1207190:intron 40.0%
AATGCGAGGCTAGATTGATT+AGG - chr8_1:64644984-64645003 Msa1207190:CDS 40.0%
! ATATGTGTCATGTCGGTGTT+GGG - chr8_1:64645165-64645184 Msa1207190:intron 40.0%
TATGAAGCAAGGACACTCTA+TGG + chr8_1:64645202-64645221 None:intergenic 40.0%
! ATAGAGTGTCCTTGCTTCAT+AGG - chr8_1:64645201-64645220 Msa1207190:intron 40.0%
ATTCAGGATCTGATTTCCTC+GGG + chr8_1:64645780-64645799 None:intergenic 40.0%
ACTAGGTGTTTCATCATGAC+AGG + chr8_1:64645921-64645940 None:intergenic 40.0%
ATGATGAAACACCTAGTAGC+TGG - chr8_1:64645924-64645943 Msa1207190:intron 40.0%
ACTGACATTAACCAGCTACT+AGG + chr8_1:64645938-64645957 None:intergenic 40.0%
TGTAATGAGGATGCGAAAGA+TGG - chr8_1:64646148-64646167 Msa1207190:intron 40.0%
TTCACTGAACACACCTCAAA+TGG + chr8_1:64646193-64646212 None:intergenic 40.0%
TGTTCAGTGAACCTTGTGTA+TGG - chr8_1:64646202-64646221 Msa1207190:intron 40.0%
AACTTCCATCAAAGGCAAAG+TGG - chr8_1:64646236-64646255 Msa1207190:intron 40.0%
CCAGACACACCAAAAGATAT+AGG + chr8_1:64646323-64646342 None:intergenic 40.0%
!! CCTATATCTTTTGGTGTGTC+TGG - chr8_1:64646320-64646339 Msa1207190:CDS 40.0%
!!! TCAGGTTGTTATTTTGGTGG+GGG - chr8_1:64646535-64646554 Msa1207190:intron 40.0%
! GTTTCTCCTTTTATCACCCA+TGG - chr8_1:64646671-64646690 Msa1207190:intron 40.0%
! TTCTCCTTTTATCACCCATG+GGG - chr8_1:64646673-64646692 Msa1207190:intron 40.0%
!! CAGTAATCCTGACTTGTTCA+AGG - chr8_1:64646696-64646715 Msa1207190:intron 40.0%
CACATACCTGTATGTTGCAT+CGG - chr8_1:64647121-64647140 Msa1207190:CDS 40.0%
ACATACCTGTATGTTGCATC+GGG - chr8_1:64647122-64647141 Msa1207190:CDS 40.0%
CGGGAAGAGAATGAAAGAAA+AGG + chr8_1:64647242-64647261 None:intergenic 40.0%
CAATGTAATCAACAGCAGCT+AGG + chr8_1:64647265-64647284 None:intergenic 40.0%
TGCTAACAACAACGGTAACA+TGG - chr8_1:64647310-64647329 Msa1207190:intron 40.0%
!! CCGGAATACATTTTCGAGAA+AGG - chr8_1:64647521-64647540 Msa1207190:intron 40.0%
GAGAATTGCAAGAGCAACTT+TGG - chr8_1:64647789-64647808 Msa1207190:CDS 40.0%
! AACTTTGGTCCCTTTCAAGT+TGG - chr8_1:64647804-64647823 Msa1207190:CDS 40.0%
TACGTACTTTCCCCTATACA+TGG + chr8_1:64647893-64647912 None:intergenic 40.0%
TTCATTGTGAGCTCAGCTAT+AGG - chr8_1:64647963-64647982 Msa1207190:five_prime_UTR 40.0%
TACTAAACGGGAAACAACGT+GGG + chr8_1:64648021-64648040 None:intergenic 40.0%
TTACTAAACGGGAAACAACG+TGG + chr8_1:64648022-64648041 None:intergenic 40.0%
! CGTTGTTTCCCGTTTAGTAA+CGG - chr8_1:64648022-64648041 Msa1207190:five_prime_UTR 40.0%
CAGGTAATCCGTTACTAAAC+GGG + chr8_1:64648033-64648052 None:intergenic 40.0%
TGTAGGTGGTATAATGCACT+TGG + chr8_1:64648133-64648152 None:intergenic 40.0%
TTCTTCAAGTGCAACGATGA+TGG - chr8_1:64648173-64648192 Msa1207190:five_prime_UTR 40.0%
!! TGACCAAGGTCGTTTTGTTA+TGG - chr8_1:64648246-64648265 Msa1207190:five_prime_UTR 40.0%
AAGCCATAACAAAACGACCT+TGG + chr8_1:64648252-64648271 None:intergenic 40.0%
TTGTTATGGCTTGAACGGAT+TGG - chr8_1:64648260-64648279 Msa1207190:five_prime_UTR 40.0%
GCTTATATCAATCTCGGCAA+TGG - chr8_1:64648305-64648324 Msa1207190:five_prime_UTR 40.0%
TGGGGGAAGAAACACAATGT+TGG + chr8_1:64642819-64642838 None:intergenic 45.0%
TACAATGCCCCATTCTCCAA+TGG - chr8_1:64643061-64643080 Msa1207190:intron 45.0%
ACAATGCCCCATTCTCCAAT+GGG - chr8_1:64643062-64643081 Msa1207190:intron 45.0%
TGGAATGGATCTCGAACAGA+TGG + chr8_1:64643205-64643224 None:intergenic 45.0%
TCTGTTCGAGATCCATTCCA+TGG - chr8_1:64643205-64643224 Msa1207190:three_prime_UTR 45.0%
TTCGAGATCCATTCCATGGT+CGG - chr8_1:64643209-64643228 Msa1207190:three_prime_UTR 45.0%
ATTCCATGGTCGGTCATTTG+CGG - chr8_1:64643219-64643238 Msa1207190:three_prime_UTR 45.0%
!!! GGTTTCATGCTTTTCGGGTT+GGG - chr8_1:64643240-64643259 Msa1207190:three_prime_UTR 45.0%
CCAGTGTAGAGAAGAAACTG+CGG + chr8_1:64643332-64643351 None:intergenic 45.0%
!! TGTTCAACCTCCACTTTTCC+AGG + chr8_1:64643677-64643696 None:intergenic 45.0%
CCCAATGTGGATGATTCTCT+AGG - chr8_1:64643785-64643804 Msa1207190:CDS 45.0%
GCCTAGAGAATCATCCACAT+TGG + chr8_1:64643789-64643808 None:intergenic 45.0%
ACAGATGCAAATCTGGCATG+AGG - chr8_1:64644329-64644348 Msa1207190:intron 45.0%
TGTTAAGGGGAGGTAATGAG+TGG + chr8_1:64644381-64644400 None:intergenic 45.0%
TCAACAAGGTCACACTAGTC+CGG + chr8_1:64644525-64644544 None:intergenic 45.0%
GGACTGAACCAACAAAGAAC+TGG - chr8_1:64644763-64644782 Msa1207190:intron 45.0%
TGTCATCTGTTCTCACTCAC+TGG - chr8_1:64644813-64644832 Msa1207190:intron 45.0%
TAGTTGCTGCCTATGAAGCA+TGG - chr8_1:64645061-64645080 Msa1207190:intron 45.0%
CTGCCTATGAAGCATGGATA+CGG - chr8_1:64645067-64645086 Msa1207190:intron 45.0%
TGTCCGTATCCATGCTTCAT+AGG + chr8_1:64645073-64645092 None:intergenic 45.0%
CATATGTGTCATGTCGGTGT+TGG - chr8_1:64645164-64645183 Msa1207190:intron 45.0%
GCAAGGACACTCTATGGATT+AGG + chr8_1:64645196-64645215 None:intergenic 45.0%
! CTGATGCTGTTGTTGTTGCA+CGG - chr8_1:64645424-64645443 Msa1207190:intron 45.0%
CAACTCAGGTACAACAAGTG+TGG + chr8_1:64645460-64645479 None:intergenic 45.0%
!! CACACTTGTTGTACCTGAGT+TGG - chr8_1:64645458-64645477 Msa1207190:intron 45.0%
GAGTTCCAGATAAGGTCATG+CGG - chr8_1:64645722-64645741 Msa1207190:intron 45.0%
ATTGACCGCATGACCTTATC+TGG + chr8_1:64645730-64645749 None:intergenic 45.0%
AGATAAGGTCATGCGGTCAA+TGG - chr8_1:64645729-64645748 Msa1207190:intron 45.0%
TGCCAATACTCTTGAGACGA+CGG - chr8_1:64645818-64645837 Msa1207190:intron 45.0%
TCACACCACTTTGCCTTTGA+TGG + chr8_1:64646244-64646263 None:intergenic 45.0%
CCTGAAAATGCCAGCATATC+TGG + chr8_1:64646520-64646539 None:intergenic 45.0%
! CCAGATATGCTGGCATTTTC+AGG - chr8_1:64646517-64646536 Msa1207190:intron 45.0%
ATACAGGATTTGAGCCCTGA+CGG - chr8_1:64647020-64647039 Msa1207190:intron 45.0%
TCCTCTTACTCCTCATGAAG+TGG - chr8_1:64647064-64647083 Msa1207190:intron 45.0%
CCTCTTACTCCTCATGAAGT+GGG - chr8_1:64647065-64647084 Msa1207190:intron 45.0%
AGCATCAAACCCACTTCATG+AGG + chr8_1:64647077-64647096 None:intergenic 45.0%
CATACCTGTATGTTGCATCG+GGG - chr8_1:64647123-64647142 Msa1207190:CDS 45.0%
ATACCTGTATGTTGCATCGG+GGG - chr8_1:64647124-64647143 Msa1207190:CDS 45.0%
GTTGCATCGGGGGAAATATA+CGG - chr8_1:64647134-64647153 Msa1207190:CDS 45.0%
TTGGGGAAAAGATCTCTGAG+AGG + chr8_1:64647179-64647198 None:intergenic 45.0%
TGTAATCAACAGCAGCTAGG+CGG + chr8_1:64647262-64647281 None:intergenic 45.0%
GCGCTAAGCTTCTTTGCATT+TGG + chr8_1:64647474-64647493 None:intergenic 45.0%
TTCTCACAGACACAAGTGCT+TGG + chr8_1:64647621-64647640 None:intergenic 45.0%
GGAACTGACGCCGAAATAAA+CGG - chr8_1:64647711-64647730 Msa1207190:intron 45.0%
!! TTTGGTCCCTTTCAAGTTGG+TGG - chr8_1:64647807-64647826 Msa1207190:CDS 45.0%
! GTGAGTGCTGTCATGAATTG+AGG + chr8_1:64648089-64648108 None:intergenic 45.0%
! GCACTTGGTTTGAGTCATGT+TGG + chr8_1:64648118-64648137 None:intergenic 45.0%
TTATACCACCTACAGCAAGC+TGG - chr8_1:64648139-64648158 Msa1207190:five_prime_UTR 45.0%
ATGTGTGTACGAGATGACCA+AGG - chr8_1:64648232-64648251 Msa1207190:five_prime_UTR 45.0%
! TGGACGATTAGAGCTGGTTT+AGG - chr8_1:64648325-64648344 Msa1207190:five_prime_UTR 45.0%
!! GAGAATGGGGCATTGTAGTG+TGG + chr8_1:64643058-64643077 None:intergenic 50.0%
CAATGCCCCATTCTCCAATG+GGG - chr8_1:64643063-64643082 Msa1207190:intron 50.0%
GACAAAACCCCAAATGGGTG+TGG - chr8_1:64643128-64643147 Msa1207190:three_prime_UTR 50.0%
GACTTCACCACACCCATTTG+GGG + chr8_1:64643138-64643157 None:intergenic 50.0%
CGACTTCACCACACCCATTT+GGG + chr8_1:64643139-64643158 None:intergenic 50.0%
ACGACTTCACCACACCCATT+TGG + chr8_1:64643140-64643159 None:intergenic 50.0%
AAATGGGTGTGGTGAAGTCG+TGG - chr8_1:64643139-64643158 Msa1207190:three_prime_UTR 50.0%
GTTAGAGTGAGTGTGGTTCG+TGG + chr8_1:64643172-64643191 None:intergenic 50.0%
GCAAATGACCGACCATGGAA+TGG + chr8_1:64643220-64643239 None:intergenic 50.0%
AAACCGCAAATGACCGACCA+TGG + chr8_1:64643225-64643244 None:intergenic 50.0%
!!! CGGTTTCATGCTTTTCGGGT+TGG - chr8_1:64643239-64643258 Msa1207190:three_prime_UTR 50.0%
CCGCAGTTTCTTCTCTACAC+TGG - chr8_1:64643329-64643348 Msa1207190:CDS 50.0%
!! TCCACTTTTCCAGGCAACGT+GGG + chr8_1:64643668-64643687 None:intergenic 50.0%
ATACGCGAGCGCATGTCAAA+TGG - chr8_1:64644715-64644734 Msa1207190:intron 50.0%
TACTTGCTTATTGCCGCGAG+CGG - chr8_1:64644739-64644758 Msa1207190:intron 50.0%
TGAAGCATGGATACGGACAC+CGG - chr8_1:64645074-64645093 Msa1207190:intron 50.0%
ACGCAGCAACCTATGAAGCA+AGG + chr8_1:64645213-64645232 None:intergenic 50.0%
TCGGGACACGCATGGTATAT+GGG + chr8_1:64645762-64645781 None:intergenic 50.0%
GCCAATACTCTTGAGACGAC+GGG - chr8_1:64645819-64645838 Msa1207190:intron 50.0%
! ACCCGTCGTCTCAAGAGTAT+TGG + chr8_1:64645823-64645842 None:intergenic 50.0%
TACTCTTGAGACGACGGGTA+AGG - chr8_1:64645824-64645843 Msa1207190:intron 50.0%
CAGGTTTGAGCCAGATATGC+TGG - chr8_1:64646507-64646526 Msa1207190:intron 50.0%
ACTGCCCCATGGGTGATAAA+AGG + chr8_1:64646680-64646699 None:intergenic 50.0%
AGTCAGGATTACTGCCCCAT+GGG + chr8_1:64646690-64646709 None:intergenic 50.0%
AAGTCAGGATTACTGCCCCA+TGG + chr8_1:64646691-64646710 None:intergenic 50.0%
CCCACTTCATGAGGAGTAAG+AGG + chr8_1:64647068-64647087 None:intergenic 50.0%
TTTCCCCCGATGCAACATAC+AGG + chr8_1:64647130-64647149 None:intergenic 50.0%
CATCGGGGGAAATATACGGT+GGG - chr8_1:64647138-64647157 Msa1207190:CDS 50.0%
ATCGGGGGAAATATACGGTG+GGG - chr8_1:64647139-64647158 Msa1207190:CDS 50.0%
! AAGATCTCTGAGAGGCTGCA+TGG + chr8_1:64647171-64647190 None:intergenic 50.0%
TACAAAGGAGATGCTTGCCG+AGG - chr8_1:64647205-64647224 Msa1207190:intron 50.0%
GTAATCAACAGCAGCTAGGC+GGG + chr8_1:64647261-64647280 None:intergenic 50.0%
ACAACAACGGTAACATGGCC+AGG - chr8_1:64647315-64647334 Msa1207190:intron 50.0%
AACATGGCCAGGATTCTTGC+TGG - chr8_1:64647326-64647345 Msa1207190:intron 50.0%
CCTTTGACCAGCAAGAATCC+TGG + chr8_1:64647336-64647355 None:intergenic 50.0%
CCAGGATTCTTGCTGGTCAA+AGG - chr8_1:64647333-64647352 Msa1207190:intron 50.0%
GTTCATGGCGAGGCATGAAA+TGG - chr8_1:64647497-64647516 Msa1207190:intron 50.0%
! AAGGTAAAGGCGTGCCAAAG+AGG - chr8_1:64647540-64647559 Msa1207190:intron 50.0%
GCGTGCCAAAGAGGATTCAT+GGG - chr8_1:64647549-64647568 Msa1207190:intron 50.0%
GCTCTCCCATGAATCCTCTT+TGG + chr8_1:64647557-64647576 None:intergenic 50.0%
TAAATGCGAGCTTAGGTGGC+CGG + chr8_1:64647677-64647696 None:intergenic 50.0%
ACTGACGCCGAAATAAACGG+AGG - chr8_1:64647714-64647733 Msa1207190:intron 50.0%
CGGCAAAGCAACTCAGTTAC+TGG - chr8_1:64648208-64648227 Msa1207190:five_prime_UTR 50.0%
CGTCACATGAGGCTACATGT+GGG - chr8_1:64648283-64648302 Msa1207190:five_prime_UTR 50.0%
GTTAGAAGTCCCACGTTGCC+TGG - chr8_1:64643656-64643675 Msa1207190:intron 55.0%
TCCCACGTTGCCTGGAAAAG+TGG - chr8_1:64643664-64643683 Msa1207190:intron 55.0%
!! CTCCACTTTTCCAGGCAACG+TGG + chr8_1:64643669-64643688 None:intergenic 55.0%
CACGTTGCCTGGAAAAGTGG+AGG - chr8_1:64643667-64643686 Msa1207190:intron 55.0%
! TGGTTGCTTTGGGCCCAATG+TGG - chr8_1:64643772-64643791 Msa1207190:CDS 55.0%
TACTGACGACTGGGTCACGA+GGG + chr8_1:64643814-64643833 None:intergenic 55.0%
TACGGACACCGGACATGACA+CGG - chr8_1:64645085-64645104 Msa1207190:intron 55.0%
GTCAGTGTCCGTGTCATGTC+CGG + chr8_1:64645096-64645115 None:intergenic 55.0%
GGGACACGCATGGTATATGG+GGG + chr8_1:64645760-64645779 None:intergenic 55.0%
CGGGACACGCATGGTATATG+GGG + chr8_1:64645761-64645780 None:intergenic 55.0%
CTCGGGACACGCATGGTATA+TGG + chr8_1:64645763-64645782 None:intergenic 55.0%
CATATACCATGCGTGTCCCG+AGG - chr8_1:64645761-64645780 Msa1207190:intron 55.0%
TGATTTCCTCGGGACACGCA+TGG + chr8_1:64645770-64645789 None:intergenic 55.0%
CACGCTTTCGTTCTCCGTCA+GGG + chr8_1:64647037-64647056 None:intergenic 55.0%
! CTGACGGAGAACGAAAGCGT+GGG - chr8_1:64647036-64647055 Msa1207190:intron 55.0%
GCATCGGGGGAAATATACGG+TGG - chr8_1:64647137-64647156 Msa1207190:CDS 55.0%
GAAGCTTAGCGCGCTGTTCA+TGG - chr8_1:64647482-64647501 Msa1207190:intron 55.0%
TGGCGAGGCATGAAATGGAC+CGG - chr8_1:64647502-64647521 Msa1207190:intron 55.0%
GGCGTGCCAAAGAGGATTCA+TGG - chr8_1:64647548-64647567 Msa1207190:intron 55.0%
AGAGGATTCATGGGAGAGCC+AGG - chr8_1:64647558-64647577 Msa1207190:intron 55.0%
GAGCCAGGAGAGATGAAAGC+TGG - chr8_1:64647573-64647592 Msa1207190:intron 55.0%
CGTCCAGCTTTCATCTCTCC+TGG + chr8_1:64647579-64647598 None:intergenic 55.0%
GGAGAGATGAAAGCTGGACG+AGG - chr8_1:64647579-64647598 Msa1207190:intron 55.0%
!! GAAGAGCTCCAGCTTGCTGT+AGG + chr8_1:64648150-64648169 None:intergenic 55.0%
!! GAACGGATTGGCGTCACATG+AGG - chr8_1:64648272-64648291 Msa1207190:five_prime_UTR 55.0%
GCGTCACATGAGGCTACATG+TGG - chr8_1:64648282-64648301 Msa1207190:five_prime_UTR 55.0%
CGGCAATGGACGATTAGAGC+TGG - chr8_1:64648319-64648338 Msa1207190:five_prime_UTR 55.0%
ACTGACGACTGGGTCACGAG+GGG + chr8_1:64643813-64643832 None:intergenic 60.0%
CTACTGACGACTGGGTCACG+AGG + chr8_1:64643815-64643834 None:intergenic 60.0%
TTGCTTATTGCCGCGAGCGG+AGG - chr8_1:64644742-64644761 Msa1207190:intron 60.0%
TTGGTTCAGTCCTCCGCTCG+CGG + chr8_1:64644755-64644774 None:intergenic 60.0%
CCACGCTTTCGTTCTCCGTC+AGG + chr8_1:64647038-64647057 None:intergenic 60.0%
CCTGACGGAGAACGAAAGCG+TGG - chr8_1:64647035-64647054 Msa1207190:intron 60.0%
GGTTTGATGCTGCGAGCGCT+TGG - chr8_1:64647086-64647105 Msa1207190:intron 60.0%
TTAGCGCGCTGTTCATGGCG+AGG - chr8_1:64647487-64647506 Msa1207190:intron 60.0%
!! GAGCTCCAGCTTGCTGTAGG+TGG + chr8_1:64648147-64648166 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 64642697 64648384 64642697 ID=Msa1207190;Name=Msa1207190
chr8_1 mRNA 64642697 64648384 64642697 ID=Msa1207190-mRNA-1;Parent=Msa1207190;Name=Msa1207190-mRNA-1;_AED=0.08;_eAED=0.08;_QI=444|1|1|1|0.88|0.8|10|482|538
chr8_1 exon 64642697 64642979 64642697 ID=Msa1207190-mRNA-1:exon:21155;Parent=Msa1207190-mRNA-1
chr8_1 exon 64643097 64643641 64643097 ID=Msa1207190-mRNA-1:exon:21154;Parent=Msa1207190-mRNA-1
chr8_1 exon 64643727 64644055 64643727 ID=Msa1207190-mRNA-1:exon:21153;Parent=Msa1207190-mRNA-1
chr8_1 exon 64644469 64644571 64644469 ID=Msa1207190-mRNA-1:exon:21152;Parent=Msa1207190-mRNA-1
chr8_1 exon 64644883 64645064 64644883 ID=Msa1207190-mRNA-1:exon:21151;Parent=Msa1207190-mRNA-1
chr8_1 exon 64645241 64645430 64645241 ID=Msa1207190-mRNA-1:exon:21150;Parent=Msa1207190-mRNA-1
chr8_1 exon 64645573 64645661 64645573 ID=Msa1207190-mRNA-1:exon:21149;Parent=Msa1207190-mRNA-1
chr8_1 exon 64646295 64646371 64646295 ID=Msa1207190-mRNA-1:exon:21148;Parent=Msa1207190-mRNA-1
chr8_1 exon 64647098 64647188 64647098 ID=Msa1207190-mRNA-1:exon:21147;Parent=Msa1207190-mRNA-1
chr8_1 exon 64647731 64648384 64647731 ID=Msa1207190-mRNA-1:exon:21146;Parent=Msa1207190-mRNA-1
chr8_1 five_prime_UTR 64647941 64648384 64647941 ID=Msa1207190-mRNA-1:five_prime_utr;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64647731 64647940 64647731 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64647098 64647188 64647098 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64646295 64646371 64646295 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64645573 64645661 64645573 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64645241 64645430 64645241 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64644883 64645064 64644883 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64644469 64644571 64644469 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64643727 64644055 64643727 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 CDS 64643296 64643641 64643296 ID=Msa1207190-mRNA-1:cds;Parent=Msa1207190-mRNA-1
chr8_1 three_prime_UTR 64643097 64643295 64643097 ID=Msa1207190-mRNA-1:three_prime_utr;Parent=Msa1207190-mRNA-1
chr8_1 three_prime_UTR 64642697 64642979 64642697 ID=Msa1207190-mRNA-1:three_prime_utr;Parent=Msa1207190-mRNA-1
Gene Sequence

>Msa1207190

ATGGGTGTGGTGAAGTCGTGGTTGTTATCCACGAACCACACTCACTCTAACACCAAAAATGCCATCTGTTCGAGATCCATTCCATGGTCGGTCATTTGCGGTTTCATGCTTTTCGGGTTGGGTCTCATTTCTCTTTTAACCGGTCACGTTGTTTCTCATCTTGAATGGTACTCTCAACGATTCGTTCACCGCAGTTTCTTCTCTACACTGGATGGAAATGATCATGCGCCAATTGATATTTGGGAATCACAATATTCTAAATACTACTACGGATGCAAAGAAAGGGGACGTCATTTTTATCCTGCTATACGCGAGCGCATGTCAAATGGCTACTTGCTTATTGCCGCGAGCGGAGGACTGAACCAACAAAGAACTGGGATAACTGATGCTGTTGTTGTTGCACGGATTCTTAATGCCACACTTGTTGTACCTGAGTTGGATCATAATTCTTTTTGGAAGGATGACAGTGACTTCGCCAACATTTTCGATGTTAATTGGTTCATTAATTATCTGGCAAAAGATGTTACTATTGTTAAAAGAGTTCCAGATAAGGTCATGCGGTCAATGGATAAACCCCCATATACCATGCGTGTCCCGAGGAAATCAGATCCTGAATATTATCTTGATCAAGTTTTGCCAATACTCTTGAGACGACGGGTTCTACAATTGACGAAGTTTGACTATAGACTTGCCAATGACCTTGATGATGAACTACAAAAACTACGTTGCCGTGTTAATTATCATGCTTTGAGATTTACAAAACCAATACGACAACTTGGTCAAAAAATTGTAATGAGGATGCGAAAGATGGCAAACCGTTATATAGCAGTCCATTTGAGGTTTGAGCCAGATATGCTGGCATTTTCAGGTTGTTATTTTGGTGGGGGTGAAAAAGAAAGACAAGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTGCCTGATTTGAGCCCTGACGGAGAACGAAAGCGTGGGAAATGTCCTCTTACTCCTCATGAAGTGGGTTTGATGCTGCGAGCGCTTGGTTATACAAATGACACATACCTGTATGTTGCATCGGGGGAAATATACGGTGGGGATGAAACCATGCAGCCTCTCAGAGATCTTTTCCCCAACATCTATACAAAGGAGATGCTTGCCGAGGAAGAATTGAAACCTTTTCTTTCATTCTCTTCCCGCCTAGCTGCTGTTGATTACATTGTTTGTGATGAAAGTAATGTATTTGTTGCTAACAACAACGGTAACATGGCCAGGATTCTTGCTGGTCAAAGGCGATATATGGGTCACAAGAGAACCATTAGACCAAATGCAAAGAAGCTTAGCGCGCTGTTCATGGCGAGGCATGAAATGGACCGGAATACATTTTCGAGAAAGGTAAAGGCGTGCCAAAGAGGATTCATGGGAGAGCCAGGAGAGATGAAAGCTGGACGAGGAGAGTTTCATGAATATCCAAGCACTTGTGTCTGTGAGAAACCATTTATAGACGAATTGAGTGAAGATGGAATCCGGCCACCTAAGCTCGCATTTAGAAATCTGACAATAGGAACTGACGCCGAAATAAACGGAGGAAATGAAGAAAGTTTTGAGCTACCAAAGCCAAATGAGAGAACATATTAA
Protein sequence

>Msa1207190

MGVVKSWLLSTNHTHSNTKNAICSRSIPWSVICGFMLFGLGLISLLTGHVVSHLEWYSQRFVHRSFFSTLDGNDHAPIDIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQKIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPDLSPDGERKRGKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKEMLAEEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRYMGHKRTIRPNAKKLSALFMARHEMDRNTFSRKVKACQRGFMGEPGEMKAGRGEFHEYPSTCVCEKPFIDELSEDGIRPPKLAFRNLTIGTDAEINGGNEESFELPKPNERTY*