AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1305250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305250 MtrunA17_Chr4g0056061 98.885 538 6 0 1 538 1 538 0.0 1112
Msa1305250 MtrunA17_Chr5g0399311 83.299 479 76 1 22 496 34 512 0.0 852
Msa1305250 MtrunA17_Chr3g0143821 62.470 413 153 2 79 490 82 493 0.0 548
Msa1305250 MtrunA17_Chr5g0448581 57.206 451 178 4 68 506 68 515 0.0 538
Msa1305250 MtrunA17_Chr1g0160781 44.192 396 187 9 74 444 115 501 3.10e-107 331
Msa1305250 MtrunA17_Chr4g0043911 38.664 494 271 14 28 496 68 554 7.22e-103 320
Msa1305250 MtrunA17_Chr3g0077321 41.355 428 230 9 81 491 123 546 3.57e-101 316
Msa1305250 MtrunA17_Chr5g0417871 42.222 405 211 8 104 491 81 479 2.34e-98 306
Msa1305250 MtrunA17_Chr5g0426591 42.711 391 213 6 78 464 84 467 3.34e-97 305
Msa1305250 MtrunA17_Chr4g0042711 41.606 411 217 8 104 497 93 497 3.70e-97 304
Msa1305250 MtrunA17_Chr4g0008451 41.531 431 228 11 76 491 202 623 5.65e-97 307
Msa1305250 MtrunA17_Chr5g0436321 42.092 411 216 12 97 492 150 553 4.58e-95 300
Msa1305250 MtrunA17_Chr3g0132371 45.652 368 189 7 108 468 141 504 8.44e-95 299
Msa1305250 MtrunA17_Chr6g0455571 44.032 377 203 6 101 470 108 483 1.53e-93 295
Msa1305250 MtrunA17_Chr3g0123521 39.492 433 235 11 80 489 119 547 5.03e-92 292
Msa1305250 MtrunA17_Chr5g0424241 44.382 356 174 7 109 444 158 509 8.29e-92 292
Msa1305250 MtrunA17_Chr2g0284071 36.364 462 239 14 80 491 186 642 2.45e-91 293
Msa1305250 MtrunA17_Chr4g0061781 41.076 409 229 7 101 498 109 516 4.90e-91 288
Msa1305250 MtrunA17_Chr4g0070551 38.876 427 237 11 79 490 201 618 8.29e-91 291
Msa1305250 MtrunA17_Chr3g0129981 44.675 338 179 4 111 444 117 450 1.50e-90 287
Msa1305250 MtrunA17_Chr2g0307971 42.400 375 208 6 101 468 108 481 2.18e-89 284
Msa1305250 MtrunA17_Chr1g0204121 38.756 418 247 6 79 490 61 475 4.80e-87 278
Msa1305250 MtrunA17_Chr5g0412251 36.222 450 242 14 79 490 60 502 1.49e-80 260
Msa1305250 MtrunA17_Chr4g0075311 36.199 442 226 11 73 464 131 566 1.36e-79 260
Msa1305250 MtrunA17_Chr1g0204141 37.678 422 249 8 79 490 61 478 3.55e-79 257
Msa1305250 MtrunA17_Chr3g0087291 38.760 387 223 8 111 489 176 556 7.92e-77 252
Msa1305250 MtrunA17_Chr3g0132951 35.681 426 233 12 101 489 94 515 1.86e-75 248
Msa1305250 MtrunA17_Chr4g0010511 39.848 394 209 10 111 489 236 616 1.42e-72 243
Msa1305250 MtrunA17_Chr4g0003561 31.250 368 221 9 78 433 46 393 1.09e-50 179
Msa1305250 MtrunA17_Chr7g0220381 34.868 304 172 9 97 380 88 385 2.92e-45 169
Msa1305250 MtrunA17_Chr1g0146501 29.650 371 232 9 40 383 12 380 3.21e-42 160
Msa1305250 MtrunA17_Chr3g0127811 32.404 287 174 6 108 383 63 340 4.01e-40 151
Msa1305250 MtrunA17_Chr2g0298881 26.879 346 207 12 101 436 28 337 7.74e-27 112
Msa1305250 MtrunA17_Chr7g0240241 44.643 112 56 1 274 379 8 119 3.53e-24 98.2
Msa1305250 MtrunA17_Chr4g0002361 27.729 339 199 12 108 435 86 389 5.65e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305250 AT4G16650.2 77.004 474 106 1 20 493 37 507 0.0 762
Msa1305250 AT4G16650.1 77.004 474 106 1 20 493 37 507 0.0 762
Msa1305250 AT1G76270.1 56.455 457 194 3 79 534 77 529 0.0 543
Msa1305250 AT1G20550.1 54.088 477 206 5 25 490 16 490 0.0 539
Msa1305250 AT4G38390.1 60.827 411 160 1 80 489 95 505 0.0 537
Msa1305250 AT1G14970.3 44.089 406 201 10 107 491 8 408 2.23e-108 330
Msa1305250 AT1G14970.2 44.089 406 201 10 107 491 34 434 5.13e-108 330
Msa1305250 AT2G01480.2 47.875 353 168 7 108 444 154 506 1.09e-106 330
Msa1305250 AT1G14970.1 44.089 406 201 10 107 491 154 554 2.63e-106 330
Msa1305250 AT2G01480.1 47.875 353 168 7 108 444 154 506 6.21e-106 329
Msa1305250 AT1G14020.1 42.356 399 217 6 104 490 87 484 4.57e-99 309
Msa1305250 AT1G35510.1 42.469 405 209 8 108 492 159 559 4.27e-98 308
Msa1305250 AT2G03280.1 42.462 398 215 7 104 488 84 480 5.07e-97 303
Msa1305250 AT5G64600.1 41.935 403 208 9 108 489 117 514 1.61e-96 303
Msa1305250 AT2G37980.1 38.990 495 258 17 35 497 141 623 1.16e-95 304
Msa1305250 AT1G22460.1 42.822 404 207 11 108 491 160 559 1.16e-95 302
Msa1305250 AT5G15740.1 43.501 377 205 6 101 470 99 474 4.40e-95 299
Msa1305250 AT3G54100.1 40.323 434 235 11 79 497 195 619 5.13e-94 300
Msa1305250 AT1G38065.2 43.514 370 190 8 108 460 26 393 1.86e-93 293
Msa1305250 AT1G38065.1 43.514 370 190 8 108 460 36 403 2.51e-93 293
Msa1305250 AT3G02250.1 43.236 377 206 6 101 470 99 474 2.89e-92 291
Msa1305250 AT1G38131.1 43.514 370 190 8 108 460 155 522 6.38e-92 293
Msa1305250 AT3G26370.1 40.441 408 215 10 105 490 155 556 9.54e-92 291
Msa1305250 AT2G03280.2 39.765 425 215 8 104 488 84 507 3.08e-91 289
Msa1305250 AT1G04910.1 41.860 387 217 5 79 460 61 444 1.58e-90 287
Msa1305250 AT5G35570.1 40.610 426 229 10 80 490 225 641 3.29e-90 290
Msa1305250 AT1G62330.1 38.614 404 199 9 109 464 222 624 2.35e-86 280
Msa1305250 AT1G11990.1 38.875 409 219 9 79 464 163 563 4.74e-84 272
Msa1305250 AT2G44500.1 40.674 386 218 6 111 489 180 561 3.34e-83 270
Msa1305250 AT5G01100.1 36.131 429 248 10 79 490 190 609 5.34e-82 268
Msa1305250 AT4G24530.1 36.345 476 257 16 55 490 48 517 6.15e-81 262
Msa1305250 AT1G29200.4 37.678 422 218 9 83 460 44 464 1.81e-79 258
Msa1305250 AT1G29200.1 37.678 422 218 9 83 460 44 464 1.81e-79 258
Msa1305250 AT1G29200.2 37.678 422 218 9 83 460 160 580 1.76e-78 258
Msa1305250 AT1G11990.2 35.650 446 219 10 79 464 148 585 1.78e-77 256
Msa1305250 AT1G29200.3 38.363 391 197 8 113 460 1 390 3.68e-76 247
Msa1305250 AT5G65470.1 34.956 452 245 14 79 489 59 502 7.95e-76 248
Msa1305250 AT3G07900.1 37.613 444 254 13 63 491 139 574 1.67e-75 249
Msa1305250 AT5G63390.1 37.824 386 229 7 111 489 167 548 9.41e-74 244
Msa1305250 AT1G52630.1 30.130 385 233 9 72 443 39 400 6.29e-50 178
Msa1305250 AT3G26370.2 41.395 215 114 4 105 309 155 367 1.00e-47 171
Msa1305250 AT3G30300.2 35.974 303 172 9 95 380 90 387 6.59e-47 174
Msa1305250 AT3G30300.1 35.974 303 172 9 95 380 90 387 6.59e-47 174
Msa1305250 AT2G44500.2 41.667 228 126 3 111 334 180 404 6.50e-45 164
Msa1305250 AT1G52630.2 30.120 332 199 7 124 443 2 312 7.06e-44 159
Msa1305250 AT3G03810.2 32.075 371 226 10 38 383 10 379 1.93e-43 164
Msa1305250 AT3G03810.1 32.075 371 226 10 38 383 10 379 1.93e-43 164
Msa1305250 AT3G21190.1 26.471 340 201 12 108 435 90 392 1.76e-23 103
Msa1305250 AT1G51630.1 24.706 340 207 11 108 435 91 393 1.10e-20 95.1

Find 184 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATGCGCCAATTGATATT+TGG 0.125119 8_3:-68631365 Msa1305250:CDS
ATGAACAAGAATGGGGATTT+TGG 0.208572 8_3:+68632296 None:intergenic
TGTATGTAACAGGCGATATA+TGG 0.223337 8_3:-68627840 Msa1305250:intron
TCACTCAATTCGTCTATAAA+TGG 0.225919 8_3:+68627626 None:intergenic
CGACTTCACCACACCCATTT+GGG 0.243600 8_3:+68632132 None:intergenic
GCTTAATATGTTCTCTCATT+TGG 0.246182 8_3:+68627503 None:intergenic
CCTGAAAATGCCAGCATATC+TGG 0.250790 8_3:+68628751 None:intergenic
CTTCTTTGCATTTGGTCTAA+TGG 0.257972 8_3:+68627805 None:intergenic
CTCGGGACACGCATGGTATA+TGG 0.258841 8_3:+68629508 None:intergenic
TAATTGGTTCATTAATTATC+TGG 0.271850 8_3:-68629593 Msa1305250:CDS
TTCATTTCCTCCGTTTATTT+CGG 0.275809 8_3:+68627547 None:intergenic
ATTAGATTTGGTTTGTTATT+CGG 0.295544 8_3:-68632560 Msa1305250:five_prime_UTR
TCAATTTAGATCCATGTATA+GGG 0.299524 8_3:-68627389 Msa1305250:three_prime_UTR
CTCAAGTCTTTAGAAGAAAA+AGG 0.303898 8_3:+68632241 None:intergenic
TACTTACCCCAGTTCTTTGT+TGG 0.313373 8_3:+68630497 None:intergenic
ATTGACCGCATGACCTTATC+TGG 0.317222 8_3:+68629541 None:intergenic
GCGCTAAGCTTCTTTGCATT+TGG 0.317689 8_3:+68627797 None:intergenic
CCACGCTTTCGTTCTCCGTC+AGG 0.330147 8_3:+68628233 None:intergenic
CGGCAAAGCAACTCAGTTAC+TGG 0.333215 8_3:-68627061 Msa1305250:three_prime_UTR
ATCTCCTTTGTATAGATGTT+GGG 0.341513 8_3:+68628074 None:intergenic
ATCGTCACCTGAATTAGATT+TGG 0.353653 8_3:-68632572 Msa1305250:five_prime_UTR
TCATGCGCCAATTGATATTT+GGG 0.356114 8_3:-68631364 Msa1305250:CDS
ACGACTTCACCACACCCATT+TGG 0.356500 8_3:+68632131 None:intergenic
GCTCTCCCATGAATCCTCTT+TGG 0.363004 8_3:+68627714 None:intergenic
TATGTTCTCTCATTTGGCTT+TGG 0.365917 8_3:+68627509 None:intergenic
TAACAAACCAAATCTAATTC+AGG 0.371361 8_3:+68632565 None:intergenic
TCGGGACACGCATGGTATAT+GGG 0.373647 8_3:+68629509 None:intergenic
AGCTTGGTGAAATCAGAAAA+AGG 0.385190 8_3:-68628693 Msa1305250:CDS
GAAGCTTAGCGCGCTGTTCA+TGG 0.386331 8_3:-68627786 Msa1305250:CDS
CCTTTCTCGAAAATGTATTC+CGG 0.393462 8_3:+68627747 None:intergenic
GGACTGAACCAACAAAGAAC+TGG 0.397018 8_3:-68630505 Msa1305250:CDS
CTCAATTTAGATCCATGTAT+AGG 0.397167 8_3:-68627390 Msa1305250:three_prime_UTR
TGGACGATTAGAGCTGGTTT+AGG 0.404354 8_3:-68626944 Msa1305250:three_prime_UTR
CTAAAACCCCATTGGAGAAT+GGG 0.407953 8_3:+68632199 None:intergenic
TTCACTGAACACACCTCAAA+TGG 0.408067 8_3:+68629078 None:intergenic
ATTGTGTTATGAACAAGAAT+GGG 0.409285 8_3:+68632288 None:intergenic
ACTTGATCAAGATAATATTC+AGG 0.409288 8_3:+68629475 None:intergenic
TATTGCACTTACTTTAGAAT+AGG 0.412673 8_3:+68632383 None:intergenic
TGAAATGAAGGTATGATAAG+TGG 0.412997 8_3:+68632432 None:intergenic
GGCGTGCCAAAGAGGATTCA+TGG 0.413721 8_3:-68627720 Msa1305250:CDS
TTTGGTCCCTTTCAAGTTGG+TGG 0.420304 8_3:-68627461 Msa1305250:three_prime_UTR
TGTGATTCCCAAATATCAAT+TGG 0.422550 8_3:+68631357 None:intergenic
GGAACTGACGCCGAAATAAA+CGG 0.425295 8_3:-68627557 Msa1305250:CDS
GAGAATTGCAAGAGCAACTT+TGG 0.426387 8_3:-68627479 Msa1305250:three_prime_UTR
TAGTTCATCATCAAGGTCAT+TGG 0.428900 8_3:+68629217 None:intergenic
CCCACTTCATGAGGAGTAAG+AGG 0.434476 8_3:+68628203 None:intergenic
GTTCATGGCGAGGCATGAAA+TGG 0.434734 8_3:-68627771 Msa1305250:CDS
TGATTTCATTCATTGCCAAT+TGG 0.435248 8_3:-68632533 Msa1305250:five_prime_UTR
AGAGGATTCATGGGAGAGCC+AGG 0.436961 8_3:-68627710 Msa1305250:CDS
GAAAATGAAACAAGACCAAT+TGG 0.438044 8_3:+68632518 None:intergenic
CATCTCCTTTGTATAGATGT+TGG 0.438548 8_3:+68628073 None:intergenic
AATTGTGTTATGAACAAGAA+TGG 0.439173 8_3:+68632287 None:intergenic
GTTATATAGCAGTCCATTTG+AGG 0.440662 8_3:-68629091 Msa1305250:intron
CACGCTTTCGTTCTCCGTCA+GGG 0.449075 8_3:+68628234 None:intergenic
ACATACCTGTATGTTGCATC+GGG 0.449719 8_3:-68628146 Msa1305250:CDS
AATAATGCCACCAACTTGAA+AGG 0.450326 8_3:+68627454 None:intergenic
CGTCCAGCTTTCATCTCTCC+TGG 0.453678 8_3:+68627692 None:intergenic
TTCATTGTGAGCTCAGCTAT+AGG 0.454563 8_3:-68627306 Msa1305250:intron
AACATGGCCAGGATTCTTGC+TGG 0.456728 8_3:-68627942 Msa1305250:CDS
TCTAAAACCCCATTGGAGAA+TGG 0.456883 8_3:+68632198 None:intergenic
CACATACCTGTATGTTGCAT+CGG 0.462028 8_3:-68628147 Msa1305250:CDS
GCATTTAGAAATCTGACAAT+AGG 0.464250 8_3:-68627578 Msa1305250:CDS
GAAATGAAGGTATGATAAGT+GGG 0.465770 8_3:+68632433 None:intergenic
ACGTTGTTTCTCATCTTGAA+TGG 0.468318 8_3:-68631982 Msa1305250:CDS
CAGGTTTGAGCCAGATATGC+TGG 0.469168 8_3:-68628761 Msa1305250:CDS
TATTCAGGATCTGATTTCCT+CGG 0.470623 8_3:+68629490 None:intergenic
AGATTTCTAAATGCGAGCTT+AGG 0.471285 8_3:+68627587 None:intergenic
ATACGCGAGCGCATGTCAAA+TGG 0.471651 8_3:-68630553 Msa1305250:CDS
AGATAAGGTCATGCGGTCAA+TGG 0.476341 8_3:-68629539 Msa1305250:CDS
TATAAATAATAATGAAATGA+AGG 0.476717 8_3:+68632420 None:intergenic
CCTTTGACCAGCAAGAATCC+TGG 0.479961 8_3:+68627935 None:intergenic
GTTGGTGGCATTATTAAACT+TGG 0.480356 8_3:-68627446 Msa1305250:three_prime_UTR
ACAATGCCCCATTCTCCAAT+GGG 0.481367 8_3:-68632206 Msa1305250:five_prime_UTR
CTACTACGGATGCAAAGAAA+GGG 0.482045 8_3:-68631322 Msa1305250:CDS
TTCTTCAAGTGCAACGATGA+TGG 0.486237 8_3:-68627096 Msa1305250:three_prime_UTR
TTCTCACAGACACAAGTGCT+TGG 0.492215 8_3:+68627650 None:intergenic
GTAATCAACAGCAGCTAGGC+GGG 0.492518 8_3:+68628010 None:intergenic
CGGGACACGCATGGTATATG+GGG 0.492983 8_3:+68629510 None:intergenic
TTCAAAATCTAAAACCCCAT+TGG 0.495443 8_3:+68632191 None:intergenic
ACTACTACGGATGCAAAGAA+AGG 0.497464 8_3:-68631323 Msa1305250:CDS
CACTTACTTTAGAATAGGAT+CGG 0.498801 8_3:+68632388 None:intergenic
ATTCAGGATCTGATTTCCTC+GGG 0.501133 8_3:+68629491 None:intergenic
AAAAGGTTTCAATTCTTCCT+CGG 0.501153 8_3:+68628046 None:intergenic
AATTGAGTGAAGATGGAATC+CGG 0.501267 8_3:-68627613 Msa1305250:CDS
ATAATGCCACCAACTTGAAA+GGG 0.502180 8_3:+68627455 None:intergenic
TGTAATGAGGATGCGAAAGA+TGG 0.508686 8_3:-68629120 Msa1305250:CDS
AACTTTGGTCCCTTTCAAGT+TGG 0.509880 8_3:-68627464 Msa1305250:three_prime_UTR
TTGTTATGGCTTGAACGGAT+TGG 0.510891 8_3:-68627009 Msa1305250:three_prime_UTR
GTATGTAACAGGCGATATAT+GGG 0.511833 8_3:-68627839 Msa1305250:intron
ATAGACGAATTGAGTGAAGA+TGG 0.512145 8_3:-68627620 Msa1305250:CDS
TAAATGCGAGCTTAGGTGGC+CGG 0.513190 8_3:+68627594 None:intergenic
ATTCCATGGTCGGTCATTTG+CGG 0.516284 8_3:-68632049 Msa1305250:CDS
GAGCCAGGAGAGATGAAAGC+TGG 0.520156 8_3:-68627695 Msa1305250:CDS
ACCCGTCGTCTCAAGAGTAT+TGG 0.523710 8_3:+68629448 None:intergenic
ACAACAACGGTAACATGGCC+AGG 0.529185 8_3:-68627953 Msa1305250:CDS
CGGGAAGAGAATGAAAGAAA+AGG 0.531327 8_3:+68628029 None:intergenic
GCTTATATCAATCTCGGCAA+TGG 0.532044 8_3:-68626964 Msa1305250:three_prime_UTR
TACAATGCCCCATTCTCCAA+TGG 0.533480 8_3:-68632207 Msa1305250:five_prime_UTR
TGTTAAAAGAGTTCCAGATA+AGG 0.534714 8_3:-68629554 Msa1305250:CDS
ACAAAACCAATACGACAACT+TGG 0.536194 8_3:-68629152 Msa1305250:CDS
TTGCTTATTGCCGCGAGCGG+AGG 0.537115 8_3:-68630526 Msa1305250:CDS
GGTTTGATGCTGCGAGCGCT+TGG 0.537934 8_3:-68628182 Msa1305250:CDS
CCAATTAACATCGAAAATGT+TGG 0.538007 8_3:+68629609 None:intergenic
TCCTCTTACTCCTCATGAAG+TGG 0.539526 8_3:-68628204 Msa1305250:CDS
CCTCTTACTCCTCATGAAGT+GGG 0.541378 8_3:-68628203 Msa1305250:CDS
TTTCTAAATGCGAGCTTAGG+TGG 0.543183 8_3:+68627590 None:intergenic
TTCGAGATCCATTCCATGGT+CGG 0.545811 8_3:-68632059 Msa1305250:CDS
GACTGAACCAACAAAGAACT+GGG 0.546290 8_3:-68630504 Msa1305250:CDS
GCCAATACTCTTGAGACGAC+GGG 0.549625 8_3:-68629449 Msa1305250:intron
CCAGGATTCTTGCTGGTCAA+AGG 0.549818 8_3:-68627935 Msa1305250:intron
ATGTGGGCTTATATCAATCT+CGG 0.550508 8_3:-68626970 Msa1305250:three_prime_UTR
TTGGTTCAGTCCTCCGCTCG+CGG 0.550953 8_3:+68630516 None:intergenic
GCACTTGGTTTGAGTCATGT+TGG 0.551582 8_3:+68627154 None:intergenic
CATATCTATAAACATTTGCA+AGG 0.551643 8_3:+68627341 None:intergenic
TCAAATGGACTGCTATATAA+CGG 0.554034 8_3:+68629093 None:intergenic
GCAAATGACCGACCATGGAA+TGG 0.559030 8_3:+68632051 None:intergenic
TACGTACTTTCCCCTATACA+TGG 0.559264 8_3:+68627378 None:intergenic
TGGCGAGGCATGAAATGGAC+CGG 0.559422 8_3:-68627766 Msa1305250:CDS
CGGCAATGGACGATTAGAGC+TGG 0.559423 8_3:-68626950 Msa1305250:three_prime_UTR
GATGATGGTCTCTATTTCAT+CGG 0.560662 8_3:-68627081 Msa1305250:three_prime_UTR
GTTAGAGTGAGTGTGGTTCG+TGG 0.562414 8_3:+68632099 None:intergenic
TCTCCTTTGTATAGATGTTG+GGG 0.562630 8_3:+68628075 None:intergenic
GAGCTCCAGCTTGCTGTAGG+TGG 0.563803 8_3:+68627125 None:intergenic
AAACCGCAAATGACCGACCA+TGG 0.565822 8_3:+68632046 None:intergenic
CAATATTCTAAATACTACTA+CGG 0.567932 8_3:-68631336 Msa1305250:CDS
TGTAGGTGGTATAATGCACT+TGG 0.570011 8_3:+68627139 None:intergenic
GCGTGCCAAAGAGGATTCAT+GGG 0.571444 8_3:-68627719 Msa1305250:CDS
CTGATGCTGTTGTTGTTGCA+CGG 0.572212 8_3:-68629844 Msa1305250:CDS
AATCTTGTTATATGCTGTGA+TGG 0.573882 8_3:-68627413 Msa1305250:three_prime_UTR
CCGCAGTTTCTTCTCTACAC+TGG 0.574458 8_3:-68631939 Msa1305250:intron
CAATGTAATCAACAGCAGCT+AGG 0.577338 8_3:+68628006 None:intergenic
AAGATCTCTGAGAGGCTGCA+TGG 0.577808 8_3:+68628100 None:intergenic
TTAGCGCGCTGTTCATGGCG+AGG 0.577856 8_3:-68627781 Msa1305250:CDS
TGCTAACAACAACGGTAACA+TGG 0.579524 8_3:-68627958 Msa1305250:CDS
GCGTCACATGAGGCTACATG+TGG 0.581233 8_3:-68626987 Msa1305250:three_prime_UTR
TGGAATGGATCTCGAACAGA+TGG 0.584319 8_3:+68632066 None:intergenic
TACTTGCTTATTGCCGCGAG+CGG 0.584367 8_3:-68630529 Msa1305250:CDS
GAAGAGCTCCAGCTTGCTGT+AGG 0.585222 8_3:+68627122 None:intergenic
GAACGGATTGGCGTCACATG+AGG 0.585749 8_3:-68626997 Msa1305250:three_prime_UTR
TTTGTGACAAAACCCCAAAT+GGG 0.586008 8_3:-68632145 Msa1305250:exon
AAGATGAGAAACAACGTGAC+CGG 0.587152 8_3:+68631988 None:intergenic
TTGTGTTATGAACAAGAATG+GGG 0.587821 8_3:+68632289 None:intergenic
GGAGAGATGAAAGCTGGACG+AGG 0.589299 8_3:-68627689 Msa1305250:CDS
TTATACCACCTACAGCAAGC+TGG 0.590274 8_3:-68627130 Msa1305250:three_prime_UTR
TGCCAATACTCTTGAGACGA+CGG 0.593501 8_3:-68629450 Msa1305250:CDS
TCTGTTCGAGATCCATTCCA+TGG 0.594173 8_3:-68632063 Msa1305250:CDS
AGCATCAAACCCACTTCATG+AGG 0.596281 8_3:+68628194 None:intergenic
TAAAACCCCATTGGAGAATG+GGG 0.597995 8_3:+68632200 None:intergenic
AAGCCATAACAAAACGACCT+TGG 0.599910 8_3:+68627020 None:intergenic
CAGAGAACTATGAATACGAA+AGG 0.603495 8_3:+68632496 None:intergenic
TGATTTCCTCGGGACACGCA+TGG 0.609508 8_3:+68629501 None:intergenic
ATACAGGATTTGAGCCCTGA+CGG 0.612438 8_3:-68628248 Msa1305250:intron
GACTTCACCACACCCATTTG+GGG 0.613598 8_3:+68632133 None:intergenic
AAATGAAGGTATGATAAGTG+GGG 0.614612 8_3:+68632434 None:intergenic
CACACTTGTTGTACCTGAGT+TGG 0.618209 8_3:-68629810 Msa1305250:CDS
ATACCTGTATGTTGCATCGG+GGG 0.619931 8_3:-68628144 Msa1305250:CDS
AAAGAATTATGATCCAACTC+AGG 0.620218 8_3:+68629797 None:intergenic
AAGGTAAAGGCGTGCCAAAG+AGG 0.620555 8_3:-68627728 Msa1305250:CDS
TTTCCCCAACATCTATACAA+AGG 0.622108 8_3:-68628078 Msa1305250:CDS
CAATTTAGATCCATGTATAG+GGG 0.626244 8_3:-68627388 Msa1305250:three_prime_UTR
CCTGACGGAGAACGAAAGCG+TGG 0.628749 8_3:-68628233 Msa1305250:CDS
GAGAATGGGGCATTGTAGTG+TGG 0.634336 8_3:+68632213 None:intergenic
GTATTTGTTGCTAACAACAA+CGG 0.634873 8_3:-68627966 Msa1305250:CDS
GACAAAACCCCAAATGGGTG+TGG 0.644598 8_3:-68632140 Msa1305250:exon
AAATGGGTGTGGTGAAGTCG+TGG 0.645174 8_3:-68632129 Msa1305250:CDS
TACAAAGGAGATGCTTGCCG+AGG 0.652331 8_3:-68628063 Msa1305250:CDS
CATATACCATGCGTGTCCCG+AGG 0.654449 8_3:-68629507 Msa1305250:CDS
TGTAATCAACAGCAGCTAGG+CGG 0.658178 8_3:+68628009 None:intergenic
ATATCTATAAACATTTGCAA+GGG 0.665419 8_3:+68627342 None:intergenic
AATGAAGGTATGATAAGTGG+GGG 0.670531 8_3:+68632435 None:intergenic
CGTCACATGAGGCTACATGT+GGG 0.672293 8_3:-68626986 Msa1305250:three_prime_UTR
CAACTCAGGTACAACAAGTG+TGG 0.676378 8_3:+68629811 None:intergenic
TACTACGGATGCAAAGAAAG+GGG 0.685798 8_3:-68631321 Msa1305250:CDS
TCAAAGCATGATAATTAACA+CGG 0.686663 8_3:+68629180 None:intergenic
CTGACGGAGAACGAAAGCGT+GGG 0.689450 8_3:-68628232 Msa1305250:CDS
GAGTTCCAGATAAGGTCATG+CGG 0.704682 8_3:-68629546 Msa1305250:CDS
CAATGCCCCATTCTCCAATG+GGG 0.710397 8_3:-68632205 Msa1305250:five_prime_UTR
GGGACACGCATGGTATATGG+GGG 0.711401 8_3:+68629511 None:intergenic
CATACCTGTATGTTGCATCG+GGG 0.711632 8_3:-68628145 Msa1305250:CDS
TTGGGGAAAAGATCTCTGAG+AGG 0.727453 8_3:+68628092 None:intergenic
ACTGACGCCGAAATAAACGG+AGG 0.750065 8_3:-68627554 Msa1305250:CDS
CCAGTGTAGAGAAGAAACTG+CGG 0.760750 8_3:+68631939 None:intergenic
ACTGAACCAACAAAGAACTG+GGG 0.763615 8_3:-68630503 Msa1305250:intron
ATGTGTGTACGAGATGACCA+AGG 0.776685 8_3:-68627037 Msa1305250:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATAATAATGAAATGA+AGG + chr8_3:68627061-68627080 None:intergenic 10.0%
!! TAACATAATAATGAATAAAA+GGG + chr8_3:68627578-68627597 None:intergenic 10.0%
!! TATATATAACATAATTAGAA+AGG + chr8_3:68628699-68628718 None:intergenic 10.0%
!! AAATAAAACAAAGTATAAAA+TGG + chr8_3:68628811-68628830 None:intergenic 10.0%
!!! TTGTGTAAAAATATAATTTT+AGG - chr8_3:68630971-68630990 Msa1305250:intron 10.0%
!!! TTATATTAATTTTTCAAACA+AGG + chr8_3:68631584-68631603 None:intergenic 10.0%
!!! ATATAAATTTTGTTTGATAA+AGG - chr8_3:68631598-68631617 Msa1305250:intron 10.0%
!! GTAACATAATAATGAATAAA+AGG + chr8_3:68627579-68627598 None:intergenic 15.0%
!! CAATCAATATATAATTAGAA+AGG + chr8_3:68628667-68628686 None:intergenic 15.0%
!! AATATTAACAAATTGTCTAT+GGG + chr8_3:68628835-68628854 None:intergenic 15.0%
!!! ATAGACAATTTGTTAATATT+GGG - chr8_3:68628835-68628854 Msa1305250:intron 15.0%
!! GAAATAACATTACTTTAATT+TGG + chr8_3:68629578-68629597 None:intergenic 15.0%
!!! TTAAAGTAATGTTATTTCTA+TGG - chr8_3:68629580-68629599 Msa1305250:CDS 15.0%
!!! AATTTGCATATTGTTTTATA+CGG - chr8_3:68629721-68629740 Msa1305250:intron 15.0%
!! AGTTATAATGTATTACAAAA+AGG + chr8_3:68629806-68629825 None:intergenic 15.0%
!!! AAAAATATAATTTTAGGTGT+TGG - chr8_3:68630977-68630996 Msa1305250:intron 15.0%
!!! ATTAGATTTGGTTTGTTATT+CGG - chr8_3:68626918-68626937 Msa1305250:three_prime_UTR 20.0%
!!! TGTAATTGATGTGAATTTTT+TGG - chr8_3:68628077-68628096 Msa1305250:CDS 20.0%
!! CAATATTCTAAATACTACTA+CGG - chr8_3:68628142-68628161 Msa1305250:CDS 20.0%
!!! AATGAAAATGACTCAAATTT+TGG + chr8_3:68628301-68628320 None:intergenic 20.0%
!! CAATATTAACAAATTGTCTA+TGG + chr8_3:68628836-68628855 None:intergenic 20.0%
!!! CATAGACAATTTGTTAATAT+TGG - chr8_3:68628834-68628853 Msa1305250:intron 20.0%
!! ATGGATAAGTTTAATGTATA+TGG - chr8_3:68629072-68629091 Msa1305250:intron 20.0%
!! TATCAAATTATTATCGATGT+CGG + chr8_3:68629332-68629351 None:intergenic 20.0%
!! GATAAAATCACATAATTCAA+TGG - chr8_3:68629348-68629367 Msa1305250:intron 20.0%
!!! TAATTGGTTCATTAATTATC+TGG - chr8_3:68629885-68629904 Msa1305250:intron 20.0%
!! AAATTTAAATTCCATACACA+AGG + chr8_3:68630426-68630445 None:intergenic 20.0%
!!! TTAAATTTAACTTCCATCAA+AGG - chr8_3:68630438-68630457 Msa1305250:intron 20.0%
!! CATTATAATAGCAATATGTA+AGG - chr8_3:68630648-68630667 Msa1305250:intron 20.0%
!!! AGTAGTTTTTCAAAATAATC+TGG - chr8_3:68631083-68631102 Msa1305250:intron 20.0%
!!! ATATAACAAGATTTTCATCA+TGG + chr8_3:68632058-68632077 None:intergenic 20.0%
!! ATATCTATAAACATTTGCAA+GGG + chr8_3:68632139-68632158 None:intergenic 20.0%
! TAACAAACCAAATCTAATTC+AGG + chr8_3:68626916-68626935 None:intergenic 25.0%
!!! TATTGCACTTACTTTAGAAT+AGG + chr8_3:68627098-68627117 None:intergenic 25.0%
! ATTGTGTTATGAACAAGAAT+GGG + chr8_3:68627193-68627212 None:intergenic 25.0%
! AATTGTGTTATGAACAAGAA+TGG + chr8_3:68627194-68627213 None:intergenic 25.0%
! GAAAAAGGAATCTTGATTTA+GGG + chr8_3:68627225-68627244 None:intergenic 25.0%
! AGAAAAAGGAATCTTGATTT+AGG + chr8_3:68627226-68627245 None:intergenic 25.0%
!! ATTGATGAAGATTTTGTGTT+TGG - chr8_3:68627309-68627328 Msa1305250:three_prime_UTR 25.0%
! CATATAAGTGCTTATGTATA+AGG - chr8_3:68627662-68627681 Msa1305250:CDS 25.0%
! CATCAATTACACAACATATT+TGG + chr8_3:68628068-68628087 None:intergenic 25.0%
!!! ATTGATGTGAATTTTTTGGT+AGG - chr8_3:68628081-68628100 Msa1305250:CDS 25.0%
!! TTGTGTTTGCTAACTAAAAA+TGG - chr8_3:68628220-68628239 Msa1305250:CDS 25.0%
! AAAATCATACATACATGTCA+AGG + chr8_3:68628248-68628267 None:intergenic 25.0%
!! ATCAGTCTAAAATTACCATT+AGG + chr8_3:68628392-68628411 None:intergenic 25.0%
!!! GTAATTTTAGACTGATTTCA+AGG - chr8_3:68628396-68628415 Msa1305250:intron 25.0%
! AATAATATCTTCACTGCTTT+AGG - chr8_3:68628488-68628507 Msa1305250:intron 25.0%
! TATATATATTGCTTCAAAGC+CGG - chr8_3:68628713-68628732 Msa1305250:CDS 25.0%
! TTCTATCTCATTATGGTAAT+TGG - chr8_3:68628888-68628907 Msa1305250:intron 25.0%
! GATAAGTTTAATGTATATGG+AGG - chr8_3:68629075-68629094 Msa1305250:intron 25.0%
!! TTTTCTTGATTTCAATCAGT+AGG + chr8_3:68629118-68629137 None:intergenic 25.0%
!! TACTGATTGAAATCAAGAAA+AGG - chr8_3:68629117-68629136 Msa1305250:CDS 25.0%
! TCTTCAAAAACAACTGAAAA+AGG + chr8_3:68629175-68629194 None:intergenic 25.0%
! TGTCTTAATTAGATTACACT+AGG + chr8_3:68629518-68629537 None:intergenic 25.0%
!! AGTTGGATCATAATTCTTTT+TGG - chr8_3:68629685-68629704 Msa1305250:intron 25.0%
! ACTTGATCAAGATAATATTC+AGG + chr8_3:68630006-68630025 None:intergenic 25.0%
! TCAAAGCATGATAATTAACA+CGG + chr8_3:68630301-68630320 None:intergenic 25.0%
! TTGGTCAAAAAATTGTAATG+AGG - chr8_3:68630345-68630364 Msa1305250:intron 25.0%
! TCATGATCTATGATGATTTA+TGG - chr8_3:68630692-68630711 Msa1305250:intron 25.0%
!!! GGTAAAGAAATAACTAGTTT+TGG + chr8_3:68631175-68631194 None:intergenic 25.0%
! TCAATTTAGATCCATGTATA+GGG - chr8_3:68632089-68632108 Msa1305250:CDS 25.0%
! CATATCTATAAACATTTGCA+AGG + chr8_3:68632140-68632159 None:intergenic 25.0%
! TATTTAGTATTTAAGTCGTC+AGG + chr8_3:68632261-68632280 None:intergenic 25.0%
! GACGACTTAAATACTAAATA+TGG - chr8_3:68632261-68632280 Msa1305250:five_prime_UTR 25.0%
TGATTTCATTCATTGCCAAT+TGG - chr8_3:68626945-68626964 Msa1305250:three_prime_UTR 30.0%
GAAAATGAAACAAGACCAAT+TGG + chr8_3:68626963-68626982 None:intergenic 30.0%
! AAATGAAGGTATGATAAGTG+GGG + chr8_3:68627047-68627066 None:intergenic 30.0%
! GAAATGAAGGTATGATAAGT+GGG + chr8_3:68627048-68627067 None:intergenic 30.0%
! TGAAATGAAGGTATGATAAG+TGG + chr8_3:68627049-68627068 None:intergenic 30.0%
!! CACTTACTTTAGAATAGGAT+CGG + chr8_3:68627093-68627112 None:intergenic 30.0%
!! ATGGGGATTTTGGTATTTTT+TGG + chr8_3:68627175-68627194 None:intergenic 30.0%
TTGTGTTATGAACAAGAATG+GGG + chr8_3:68627192-68627211 None:intergenic 30.0%
! CTCAAGTCTTTAGAAGAAAA+AGG + chr8_3:68627240-68627259 None:intergenic 30.0%
! TTCAAAATCTAAAACCCCAT+TGG + chr8_3:68627290-68627309 None:intergenic 30.0%
! AACATAATGGCTTAAGGTTT+TGG - chr8_3:68627930-68627949 Msa1305250:intron 30.0%
! ACATAATGGCTTAAGGTTTT+GGG - chr8_3:68627931-68627950 Msa1305250:intron 30.0%
!!! ATGTGAATTTTTTGGTAGGA+TGG - chr8_3:68628085-68628104 Msa1305250:CDS 30.0%
TGTGATTCCCAAATATCAAT+TGG + chr8_3:68628124-68628143 None:intergenic 30.0%
!! ATGAAGCTTTATTTGCCTAA+TGG - chr8_3:68628374-68628393 Msa1305250:intron 30.0%
TTAGGATAGATTACATCAGT+AGG - chr8_3:68628506-68628525 Msa1305250:intron 30.0%
TGAGTTTAGATCATGTTAAG+GGG + chr8_3:68628604-68628623 None:intergenic 30.0%
CTGAGTTTAGATCATGTTAA+GGG + chr8_3:68628605-68628624 None:intergenic 30.0%
ACTGAGTTTAGATCATGTTA+AGG + chr8_3:68628606-68628625 None:intergenic 30.0%
TTAACATGATCTAAACTCAG+TGG - chr8_3:68628605-68628624 Msa1305250:intron 30.0%
! ATTTTCTCATAGCAGTGTAA+TGG + chr8_3:68628779-68628798 None:intergenic 30.0%
!! TGTCACTTTCTATCTCATTA+TGG - chr8_3:68628881-68628900 Msa1305250:intron 30.0%
AAAGAATTATGATCCAACTC+AGG + chr8_3:68629684-68629703 None:intergenic 30.0%
! GGATCATAATTCTTTTTGGA+AGG - chr8_3:68629689-68629708 Msa1305250:intron 30.0%
GAAGTCACTGTATTACAAAA+AGG + chr8_3:68629848-68629867 None:intergenic 30.0%
CCAATTAACATCGAAAATGT+TGG + chr8_3:68629872-68629891 None:intergenic 30.0%
! CCAACATTTTCGATGTTAAT+TGG - chr8_3:68629869-68629888 Msa1305250:intron 30.0%
TGTTAAAAGAGTTCCAGATA+AGG - chr8_3:68629924-68629943 Msa1305250:intron 30.0%
!! TCAGTTTTGATAACTCCTTT+TGG - chr8_3:68630163-68630182 Msa1305250:intron 30.0%
!! CAGATTTTTCGGTATTTTAC+AGG - chr8_3:68630205-68630224 Msa1305250:intron 30.0%
! GTTTTTGTAGTTCATCATCA+AGG + chr8_3:68630271-68630290 None:intergenic 30.0%
!! TCAAATGGACTGCTATATAA+CGG + chr8_3:68630388-68630407 None:intergenic 30.0%
TATAGGGATGAGATCATATA+TGG + chr8_3:68630516-68630535 None:intergenic 30.0%
GATAAAGGAGTTGTGAAAAT+GGG + chr8_3:68630568-68630587 None:intergenic 30.0%
TGATAAAGGAGTTGTGAAAA+TGG + chr8_3:68630569-68630588 None:intergenic 30.0%
TCAATTTCAGACAGTGATAA+AGG + chr8_3:68630583-68630602 None:intergenic 30.0%
GATCATGAGAATTCAAACAT+TGG + chr8_3:68630680-68630699 None:intergenic 30.0%
!!! GCATTTTCAGGTTGTTATTT+TGG - chr8_3:68630739-68630758 Msa1305250:intron 30.0%
!!! TTTTCAGGTTGTTATTTTGG+TGG - chr8_3:68630742-68630761 Msa1305250:intron 30.0%
!!! TTTCAGGTTGTTATTTTGGT+GGG - chr8_3:68630743-68630762 Msa1305250:intron 30.0%
! GTTTTGTCAGTAGAAATCAT+AGG + chr8_3:68630839-68630858 None:intergenic 30.0%
TATTGTCAGTGGAAATGATA+TGG + chr8_3:68630861-68630880 None:intergenic 30.0%
TGTATTATTGCAAGAGGTAA+TGG + chr8_3:68631215-68631234 None:intergenic 30.0%
ATTACCTCTTGCAATAATAC+AGG - chr8_3:68631214-68631233 Msa1305250:intron 30.0%
AAATCCTGTATTATTGCAAG+AGG + chr8_3:68631221-68631240 None:intergenic 30.0%
ATCTCCTTTGTATAGATGTT+GGG + chr8_3:68631407-68631426 None:intergenic 30.0%
AAAAGGTTTCAATTCTTCCT+CGG + chr8_3:68631435-68631454 None:intergenic 30.0%
! GTATTTGTTGCTAACAACAA+CGG - chr8_3:68631512-68631531 Msa1305250:intron 30.0%
GATTTCTTCTTGTATGTAAC+AGG - chr8_3:68631628-68631647 Msa1305250:intron 30.0%
!! TACATTTTCGAGAAAGGTAA+AGG - chr8_3:68631737-68631756 Msa1305250:intron 30.0%
TCACTCAATTCGTCTATAAA+TGG + chr8_3:68631855-68631874 None:intergenic 30.0%
TTCATTTCCTCCGTTTATTT+CGG + chr8_3:68631934-68631953 None:intergenic 30.0%
GCTTAATATGTTCTCTCATT+TGG + chr8_3:68631978-68631997 None:intergenic 30.0%
! AATCTTGTTATATGCTGTGA+TGG - chr8_3:68632065-68632084 Msa1305250:CDS 30.0%
CTCAATTTAGATCCATGTAT+AGG - chr8_3:68632088-68632107 Msa1305250:CDS 30.0%
CAATTTAGATCCATGTATAG+GGG - chr8_3:68632090-68632109 Msa1305250:CDS 30.0%
CAGAGAACTATGAATACGAA+AGG + chr8_3:68626985-68627004 None:intergenic 35.0%
! AATGAAGGTATGATAAGTGG+GGG + chr8_3:68627046-68627065 None:intergenic 35.0%
! ATGAACAAGAATGGGGATTT+TGG + chr8_3:68627185-68627204 None:intergenic 35.0%
! TTTTGTGACAAAACCCCAAA+TGG - chr8_3:68627332-68627351 Msa1305250:three_prime_UTR 35.0%
TTTGTGACAAAACCCCAAAT+GGG - chr8_3:68627333-68627352 Msa1305250:three_prime_UTR 35.0%
! ATTTGCGGTTTCATGCTTTT+CGG - chr8_3:68627444-68627463 Msa1305250:three_prime_UTR 35.0%
! GGTCTCATTTCTCTTTTAAC+CGG - chr8_3:68627471-68627490 Msa1305250:three_prime_UTR 35.0%
!! ACGTTGTTTCTCATCTTGAA+TGG - chr8_3:68627496-68627515 Msa1305250:exon 35.0%
!! TGCTTTTTGTATTGCCAATG+TGG - chr8_3:68627610-68627629 Msa1305250:CDS 35.0%
ATTCCTATTGTAGACCACAT+TGG + chr8_3:68627627-68627646 None:intergenic 35.0%
CTTATTTCCATAAGTGCTAC+AGG + chr8_3:68627747-68627766 None:intergenic 35.0%
GAGAAGACTCACAAACATAA+TGG - chr8_3:68627917-68627936 Msa1305250:intron 35.0%
CTCACAAACATAATGGCTTA+AGG - chr8_3:68627924-68627943 Msa1305250:intron 35.0%
!!! TAAGGTTTTGGGTAAAGATG+TGG - chr8_3:68627942-68627961 Msa1305250:CDS 35.0%
TGGTGTACAATTCACTTGTA+TGG - chr8_3:68627962-68627981 Msa1305250:CDS 35.0%
ATTCACTTGTATGGTTGCTT+TGG - chr8_3:68627971-68627990 Msa1305250:CDS 35.0%
! TTCACTTGTATGGTTGCTTT+GGG - chr8_3:68627972-68627991 Msa1305250:CDS 35.0%
AAACTTATCTACTGACGACT+GGG + chr8_3:68628033-68628052 None:intergenic 35.0%
TAAACTTATCTACTGACGAC+TGG + chr8_3:68628034-68628053 None:intergenic 35.0%
ATCATGCGCCAATTGATATT+TGG - chr8_3:68628113-68628132 Msa1305250:CDS 35.0%
TCATGCGCCAATTGATATTT+GGG - chr8_3:68628114-68628133 Msa1305250:CDS 35.0%
AAAAACAGCACATAGCAACA+TGG + chr8_3:68628436-68628455 None:intergenic 35.0%
!! GATTTTTAATTACACCGTCG+TGG - chr8_3:68629049-68629068 Msa1305250:intron 35.0%
TTAAACTTATCCATCCACGA+CGG + chr8_3:68629066-68629085 None:intergenic 35.0%
!!! AGTTGTTTTTGAAGAATGCG+AGG - chr8_3:68629180-68629199 Msa1305250:CDS 35.0%
!! CTAGTTCTATCGATATCATC+AGG + chr8_3:68629233-68629252 None:intergenic 35.0%
TGGAATCATATGTGTCATGT+CGG - chr8_3:68629368-68629387 Msa1305250:intron 35.0%
CACTAGGCTCTATTAACAAT+AGG + chr8_3:68629502-68629521 None:intergenic 35.0%
!! ATTCTTTTTGGAAGGATGAC+AGG - chr8_3:68629697-68629716 Msa1305250:intron 35.0%
TATTCAGGATCTGATTTCCT+CGG + chr8_3:68629991-68630010 None:intergenic 35.0%
!!! CTCCTTTTGGAATTCAATTG+TGG - chr8_3:68630176-68630195 Msa1305250:intron 35.0%
CACCACAATTGAATTCCAAA+AGG + chr8_3:68630181-68630200 None:intergenic 35.0%
!!! CTTTTGGAATTCAATTGTGG+TGG - chr8_3:68630179-68630198 Msa1305250:intron 35.0%
! TGTGGTGGTAACAGATTTTT+CGG - chr8_3:68630194-68630213 Msa1305250:intron 35.0%
TAGTTCATCATCAAGGTCAT+TGG + chr8_3:68630264-68630283 None:intergenic 35.0%
ACAAAACCAATACGACAACT+TGG - chr8_3:68630326-68630345 Msa1305250:intron 35.0%
! TTTTGACCAAGTTGTCGTAT+TGG + chr8_3:68630335-68630354 None:intergenic 35.0%
GTTATATAGCAGTCCATTTG+AGG - chr8_3:68630387-68630406 Msa1305250:intron 35.0%
TGGACAACATGTATGTCATA+AGG + chr8_3:68630496-68630515 None:intergenic 35.0%
! GATCTCATCCCTATATCTTT+TGG - chr8_3:68630521-68630540 Msa1305250:CDS 35.0%
CAGACACACCAAAAGATATA+GGG + chr8_3:68630532-68630551 None:intergenic 35.0%
TCTATGATGATTTATGGCAC+AGG - chr8_3:68630698-68630717 Msa1305250:intron 35.0%
!!! TTCAGGTTGTTATTTTGGTG+GGG - chr8_3:68630744-68630763 Msa1305250:intron 35.0%
GAAAAAGAAAGACAAGAGCT+TGG - chr8_3:68630769-68630788 Msa1305250:intron 35.0%
! AGCTTGGTGAAATCAGAAAA+AGG - chr8_3:68630785-68630804 Msa1305250:intron 35.0%
TTGGTGAAATCAGAAAAAGG+TGG - chr8_3:68630788-68630807 Msa1305250:intron 35.0%
! TCATAGGATTGTAGTCTTAC+AGG + chr8_3:68630823-68630842 None:intergenic 35.0%
AAAGGAGAAACTATTGTCAG+TGG + chr8_3:68630872-68630891 None:intergenic 35.0%
! TTTCTCCTTTTATCACCCAT+GGG - chr8_3:68630882-68630901 Msa1305250:intron 35.0%
AATAGATCCTTGAACAAGTC+AGG + chr8_3:68630916-68630935 None:intergenic 35.0%
!!! GGTGTTGGTTTTATAAGTAG+AGG - chr8_3:68630992-68631011 Msa1305250:intron 35.0%
ATGGCTCATTCACTTGATAT+TGG + chr8_3:68631196-68631215 None:intergenic 35.0%
TTTCCCCAACATCTATACAA+AGG - chr8_3:68631400-68631419 Msa1305250:intron 35.0%
TCTCCTTTGTATAGATGTTG+GGG + chr8_3:68631406-68631425 None:intergenic 35.0%
CATCTCCTTTGTATAGATGT+TGG + chr8_3:68631408-68631427 None:intergenic 35.0%
TGTATGTAACAGGCGATATA+TGG - chr8_3:68631638-68631657 Msa1305250:intron 35.0%
GTATGTAACAGGCGATATAT+GGG - chr8_3:68631639-68631658 Msa1305250:intron 35.0%
CTTCTTTGCATTTGGTCTAA+TGG + chr8_3:68631676-68631695 None:intergenic 35.0%
CCTTTCTCGAAAATGTATTC+CGG + chr8_3:68631734-68631753 None:intergenic 35.0%
ATAGACGAATTGAGTGAAGA+TGG - chr8_3:68631858-68631877 Msa1305250:intron 35.0%
AATTGAGTGAAGATGGAATC+CGG - chr8_3:68631865-68631884 Msa1305250:intron 35.0%
! TATGTTCTCTCATTTGGCTT+TGG + chr8_3:68631972-68631991 None:intergenic 35.0%
ATAATGCCACCAACTTGAAA+GGG + chr8_3:68632026-68632045 None:intergenic 35.0%
AATAATGCCACCAACTTGAA+AGG + chr8_3:68632027-68632046 None:intergenic 35.0%
!! GTTGGTGGCATTATTAAACT+TGG - chr8_3:68632032-68632051 Msa1305250:CDS 35.0%
! TGGGAGAATACTCAATTTTG+TGG + chr8_3:68632211-68632230 None:intergenic 35.0%
TCAGGTAATCCGTTACTAAA+CGG + chr8_3:68632243-68632262 None:intergenic 35.0%
! GATGATGGTCTCTATTTCAT+CGG - chr8_3:68632397-68632416 Msa1305250:five_prime_UTR 35.0%
!! TCGTTTTGTTATGGCTTGAA+CGG - chr8_3:68632464-68632483 Msa1305250:five_prime_UTR 35.0%
ATGTGGGCTTATATCAATCT+CGG - chr8_3:68632508-68632527 Msa1305250:five_prime_UTR 35.0%
TAAAACCCCATTGGAGAATG+GGG + chr8_3:68627281-68627300 None:intergenic 40.0%
CTAAAACCCCATTGGAGAAT+GGG + chr8_3:68627282-68627301 None:intergenic 40.0%
! TCTAAAACCCCATTGGAGAA+TGG + chr8_3:68627283-68627302 None:intergenic 40.0%
!!! TTTTGGTGTTAGAGTGAGTG+TGG + chr8_3:68627389-68627408 None:intergenic 40.0%
! TCTCGAACAGATGGCATTTT+TGG + chr8_3:68627406-68627425 None:intergenic 40.0%
! TTTGCGGTTTCATGCTTTTC+GGG - chr8_3:68627445-68627464 Msa1305250:three_prime_UTR 40.0%
AAGATGAGAAACAACGTGAC+CGG + chr8_3:68627493-68627512 None:intergenic 40.0%
TTGCCAATGTGGTCTACAAT+AGG - chr8_3:68627621-68627640 Msa1305250:CDS 40.0%
! GTGCTACAGGATAGCTTTTA+TGG + chr8_3:68627734-68627753 None:intergenic 40.0%
AAGCTATCCTGTAGCACTTA+TGG - chr8_3:68627737-68627756 Msa1305250:CDS 40.0%
CCTAGAGAATCATCCACATT+GGG + chr8_3:68627998-68628017 None:intergenic 40.0%
ACTACTACGGATGCAAAGAA+AGG - chr8_3:68628155-68628174 Msa1305250:CDS 40.0%
CTACTACGGATGCAAAGAAA+GGG - chr8_3:68628156-68628175 Msa1305250:CDS 40.0%
TACTACGGATGCAAAGAAAG+GGG - chr8_3:68628157-68628176 Msa1305250:CDS 40.0%
TAGCAACATGGAGACTTAGA+AGG + chr8_3:68628424-68628443 None:intergenic 40.0%
ACTAGAGACAGATGCAAATC+TGG - chr8_3:68628532-68628551 Msa1305250:intron 40.0%
GTTTAGATCATGTTAAGGGG+AGG + chr8_3:68628601-68628620 None:intergenic 40.0%
TAGTGTGACCTTGTTGAAAG+AGG - chr8_3:68628738-68628757 Msa1305250:CDS 40.0%
CATGAAAGCCTCTTTCAACA+AGG + chr8_3:68628749-68628768 None:intergenic 40.0%
CTTGTTGAAAGAGGCTTTCA+TGG - chr8_3:68628747-68628766 Msa1305250:CDS 40.0%
! TCATAGCAGTGTAATGGAAG+GGG + chr8_3:68628773-68628792 None:intergenic 40.0%
! CTCATAGCAGTGTAATGGAA+GGG + chr8_3:68628774-68628793 None:intergenic 40.0%
! TCTCATAGCAGTGTAATGGA+AGG + chr8_3:68628775-68628794 None:intergenic 40.0%
GACTGAACCAACAAAGAACT+GGG - chr8_3:68628974-68628993 Msa1305250:intron 40.0%
ACTGAACCAACAAAGAACTG+GGG - chr8_3:68628975-68628994 Msa1305250:intron 40.0%
TACTTACCCCAGTTCTTTGT+TGG + chr8_3:68628984-68629003 None:intergenic 40.0%
AACAAAGAACTGGGGTAAGT+AGG - chr8_3:68628983-68629002 Msa1305250:intron 40.0%
TTTAATTACACCGTCGTGGA+TGG - chr8_3:68629053-68629072 Msa1305250:intron 40.0%
AATGCGAGGCTAGATTGATT+AGG - chr8_3:68629194-68629213 Msa1305250:CDS 40.0%
! ATATGTGTCATGTCGGTGTT+GGG - chr8_3:68629375-68629394 Msa1305250:intron 40.0%
TATGAAGCAAGGACACTCTA+TGG + chr8_3:68629412-68629431 None:intergenic 40.0%
! ATAGAGTGTCCTTGCTTCAT+AGG - chr8_3:68629411-68629430 Msa1305250:intron 40.0%
ATTCAGGATCTGATTTCCTC+GGG + chr8_3:68629990-68630009 None:intergenic 40.0%
ACTAGGTGTTTCATCATGAC+AGG + chr8_3:68630131-68630150 None:intergenic 40.0%
ATGATGAAACACCTAGTAGC+TGG - chr8_3:68630134-68630153 Msa1305250:intron 40.0%
ACTGACATTAACCAGCTACT+AGG + chr8_3:68630148-68630167 None:intergenic 40.0%
TGTAATGAGGATGCGAAAGA+TGG - chr8_3:68630358-68630377 Msa1305250:intron 40.0%
TTCACTGAACACACCTCAAA+TGG + chr8_3:68630403-68630422 None:intergenic 40.0%
TGTTCAGTGAACCTTGTGTA+TGG - chr8_3:68630412-68630431 Msa1305250:intron 40.0%
AACTTCCATCAAAGGCAAAG+TGG - chr8_3:68630446-68630465 Msa1305250:intron 40.0%
CCAGACACACCAAAAGATAT+AGG + chr8_3:68630533-68630552 None:intergenic 40.0%
!! CCTATATCTTTTGGTGTGTC+TGG - chr8_3:68630530-68630549 Msa1305250:CDS 40.0%
!!! TCAGGTTGTTATTTTGGTGG+GGG - chr8_3:68630745-68630764 Msa1305250:intron 40.0%
! GTTTCTCCTTTTATCACCCA+TGG - chr8_3:68630881-68630900 Msa1305250:intron 40.0%
! TTCTCCTTTTATCACCCATG+GGG - chr8_3:68630883-68630902 Msa1305250:intron 40.0%
!! CAGTAATCCTGACTTGTTCA+AGG - chr8_3:68630906-68630925 Msa1305250:intron 40.0%
CACATACCTGTATGTTGCAT+CGG - chr8_3:68631331-68631350 Msa1305250:CDS 40.0%
ACATACCTGTATGTTGCATC+GGG - chr8_3:68631332-68631351 Msa1305250:CDS 40.0%
CGGGAAGAGAATGAAAGAAA+AGG + chr8_3:68631452-68631471 None:intergenic 40.0%
CAATGTAATCAACAGCAGCT+AGG + chr8_3:68631475-68631494 None:intergenic 40.0%
TGCTAACAACAACGGTAACA+TGG - chr8_3:68631520-68631539 Msa1305250:intron 40.0%
!! CCGGAATACATTTTCGAGAA+AGG - chr8_3:68631731-68631750 Msa1305250:intron 40.0%
GAGAATTGCAAGAGCAACTT+TGG - chr8_3:68631999-68632018 Msa1305250:CDS 40.0%
! AACTTTGGTCCCTTTCAAGT+TGG - chr8_3:68632014-68632033 Msa1305250:CDS 40.0%
TACGTACTTTCCCCTATACA+TGG + chr8_3:68632103-68632122 None:intergenic 40.0%
TTCATTGTGAGCTCAGCTAT+AGG - chr8_3:68632172-68632191 Msa1305250:five_prime_UTR 40.0%
TACTAAACGGGAAACAACGT+GGG + chr8_3:68632230-68632249 None:intergenic 40.0%
TTACTAAACGGGAAACAACG+TGG + chr8_3:68632231-68632250 None:intergenic 40.0%
! CGTTGTTTCCCGTTTAGTAA+CGG - chr8_3:68632231-68632250 Msa1305250:five_prime_UTR 40.0%
CAGGTAATCCGTTACTAAAC+GGG + chr8_3:68632242-68632261 None:intergenic 40.0%
TGTAGGTGGTATAATGCACT+TGG + chr8_3:68632342-68632361 None:intergenic 40.0%
TTCTTCAAGTGCAACGATGA+TGG - chr8_3:68632382-68632401 Msa1305250:five_prime_UTR 40.0%
!! TGACCAAGGTCGTTTTGTTA+TGG - chr8_3:68632455-68632474 Msa1305250:five_prime_UTR 40.0%
AAGCCATAACAAAACGACCT+TGG + chr8_3:68632461-68632480 None:intergenic 40.0%
TTGTTATGGCTTGAACGGAT+TGG - chr8_3:68632469-68632488 Msa1305250:five_prime_UTR 40.0%
GCTTATATCAATCTCGGCAA+TGG - chr8_3:68632514-68632533 Msa1305250:five_prime_UTR 40.0%
TGGGGGAAGAAACACAATGT+TGG + chr8_3:68627029-68627048 None:intergenic 45.0%
TACAATGCCCCATTCTCCAA+TGG - chr8_3:68627271-68627290 Msa1305250:intron 45.0%
ACAATGCCCCATTCTCCAAT+GGG - chr8_3:68627272-68627291 Msa1305250:intron 45.0%
TGGAATGGATCTCGAACAGA+TGG + chr8_3:68627415-68627434 None:intergenic 45.0%
TCTGTTCGAGATCCATTCCA+TGG - chr8_3:68627415-68627434 Msa1305250:three_prime_UTR 45.0%
TTCGAGATCCATTCCATGGT+CGG - chr8_3:68627419-68627438 Msa1305250:three_prime_UTR 45.0%
ATTCCATGGTCGGTCATTTG+CGG - chr8_3:68627429-68627448 Msa1305250:three_prime_UTR 45.0%
!!! GGTTTCATGCTTTTCGGGTT+GGG - chr8_3:68627450-68627469 Msa1305250:three_prime_UTR 45.0%
CCAGTGTAGAGAAGAAACTG+CGG + chr8_3:68627542-68627561 None:intergenic 45.0%
!! TGTTCAACCTCCACTTTTCC+AGG + chr8_3:68627887-68627906 None:intergenic 45.0%
CCCAATGTGGATGATTCTCT+AGG - chr8_3:68627995-68628014 Msa1305250:CDS 45.0%
GCCTAGAGAATCATCCACAT+TGG + chr8_3:68627999-68628018 None:intergenic 45.0%
ACAGATGCAAATCTGGCATG+AGG - chr8_3:68628539-68628558 Msa1305250:intron 45.0%
TGTTAAGGGGAGGTAATGAG+TGG + chr8_3:68628591-68628610 None:intergenic 45.0%
TCAACAAGGTCACACTAGTC+CGG + chr8_3:68628735-68628754 None:intergenic 45.0%
GGACTGAACCAACAAAGAAC+TGG - chr8_3:68628973-68628992 Msa1305250:intron 45.0%
TGTCATCTGTTCTCACTCAC+TGG - chr8_3:68629023-68629042 Msa1305250:intron 45.0%
TAGTTGCTGCCTATGAAGCA+TGG - chr8_3:68629271-68629290 Msa1305250:intron 45.0%
CTGCCTATGAAGCATGGATA+CGG - chr8_3:68629277-68629296 Msa1305250:intron 45.0%
TGTCCGTATCCATGCTTCAT+AGG + chr8_3:68629283-68629302 None:intergenic 45.0%
CATATGTGTCATGTCGGTGT+TGG - chr8_3:68629374-68629393 Msa1305250:intron 45.0%
GCAAGGACACTCTATGGATT+AGG + chr8_3:68629406-68629425 None:intergenic 45.0%
! CTGATGCTGTTGTTGTTGCA+CGG - chr8_3:68629634-68629653 Msa1305250:intron 45.0%
CAACTCAGGTACAACAAGTG+TGG + chr8_3:68629670-68629689 None:intergenic 45.0%
!! CACACTTGTTGTACCTGAGT+TGG - chr8_3:68629668-68629687 Msa1305250:intron 45.0%
GAGTTCCAGATAAGGTCATG+CGG - chr8_3:68629932-68629951 Msa1305250:intron 45.0%
ATTGACCGCATGACCTTATC+TGG + chr8_3:68629940-68629959 None:intergenic 45.0%
AGATAAGGTCATGCGGTCAA+TGG - chr8_3:68629939-68629958 Msa1305250:intron 45.0%
TGCCAATACTCTTGAGACGA+CGG - chr8_3:68630028-68630047 Msa1305250:intron 45.0%
TCACACCACTTTGCCTTTGA+TGG + chr8_3:68630454-68630473 None:intergenic 45.0%
CCTGAAAATGCCAGCATATC+TGG + chr8_3:68630730-68630749 None:intergenic 45.0%
! CCAGATATGCTGGCATTTTC+AGG - chr8_3:68630727-68630746 Msa1305250:intron 45.0%
ATACAGGATTTGAGCCCTGA+CGG - chr8_3:68631230-68631249 Msa1305250:intron 45.0%
TCCTCTTACTCCTCATGAAG+TGG - chr8_3:68631274-68631293 Msa1305250:intron 45.0%
CCTCTTACTCCTCATGAAGT+GGG - chr8_3:68631275-68631294 Msa1305250:intron 45.0%
AGCATCAAACCCACTTCATG+AGG + chr8_3:68631287-68631306 None:intergenic 45.0%
CATACCTGTATGTTGCATCG+GGG - chr8_3:68631333-68631352 Msa1305250:CDS 45.0%
ATACCTGTATGTTGCATCGG+GGG - chr8_3:68631334-68631353 Msa1305250:CDS 45.0%
GTTGCATCGGGGGAAATATA+CGG - chr8_3:68631344-68631363 Msa1305250:CDS 45.0%
TTGGGGAAAAGATCTCTGAG+AGG + chr8_3:68631389-68631408 None:intergenic 45.0%
TGTAATCAACAGCAGCTAGG+CGG + chr8_3:68631472-68631491 None:intergenic 45.0%
GCGCTAAGCTTCTTTGCATT+TGG + chr8_3:68631684-68631703 None:intergenic 45.0%
TTCTCACAGACACAAGTGCT+TGG + chr8_3:68631831-68631850 None:intergenic 45.0%
GGAACTGACGCCGAAATAAA+CGG - chr8_3:68631921-68631940 Msa1305250:intron 45.0%
!! TTTGGTCCCTTTCAAGTTGG+TGG - chr8_3:68632017-68632036 Msa1305250:CDS 45.0%
! GTGAGTGCTGTCATGAATTG+AGG + chr8_3:68632298-68632317 None:intergenic 45.0%
! GCACTTGGTTTGAGTCATGT+TGG + chr8_3:68632327-68632346 None:intergenic 45.0%
TTATACCACCTACAGCAAGC+TGG - chr8_3:68632348-68632367 Msa1305250:five_prime_UTR 45.0%
ATGTGTGTACGAGATGACCA+AGG - chr8_3:68632441-68632460 Msa1305250:five_prime_UTR 45.0%
! TGGACGATTAGAGCTGGTTT+AGG - chr8_3:68632534-68632553 Msa1305250:five_prime_UTR 45.0%
!! GAGAATGGGGCATTGTAGTG+TGG + chr8_3:68627268-68627287 None:intergenic 50.0%
CAATGCCCCATTCTCCAATG+GGG - chr8_3:68627273-68627292 Msa1305250:intron 50.0%
GACAAAACCCCAAATGGGTG+TGG - chr8_3:68627338-68627357 Msa1305250:three_prime_UTR 50.0%
GACTTCACCACACCCATTTG+GGG + chr8_3:68627348-68627367 None:intergenic 50.0%
CGACTTCACCACACCCATTT+GGG + chr8_3:68627349-68627368 None:intergenic 50.0%
ACGACTTCACCACACCCATT+TGG + chr8_3:68627350-68627369 None:intergenic 50.0%
AAATGGGTGTGGTGAAGTCG+TGG - chr8_3:68627349-68627368 Msa1305250:three_prime_UTR 50.0%
GTTAGAGTGAGTGTGGTTCG+TGG + chr8_3:68627382-68627401 None:intergenic 50.0%
GCAAATGACCGACCATGGAA+TGG + chr8_3:68627430-68627449 None:intergenic 50.0%
AAACCGCAAATGACCGACCA+TGG + chr8_3:68627435-68627454 None:intergenic 50.0%
!!! CGGTTTCATGCTTTTCGGGT+TGG - chr8_3:68627449-68627468 Msa1305250:three_prime_UTR 50.0%
CCGCAGTTTCTTCTCTACAC+TGG - chr8_3:68627539-68627558 Msa1305250:CDS 50.0%
!! TCCACTTTTCCAGGCAACGT+GGG + chr8_3:68627878-68627897 None:intergenic 50.0%
ATACGCGAGCGCATGTCAAA+TGG - chr8_3:68628925-68628944 Msa1305250:intron 50.0%
TACTTGCTTATTGCCGCGAG+CGG - chr8_3:68628949-68628968 Msa1305250:intron 50.0%
TGAAGCATGGATACGGACAC+CGG - chr8_3:68629284-68629303 Msa1305250:intron 50.0%
ACGCAGCAACCTATGAAGCA+AGG + chr8_3:68629423-68629442 None:intergenic 50.0%
TCGGGACACGCATGGTATAT+GGG + chr8_3:68629972-68629991 None:intergenic 50.0%
GCCAATACTCTTGAGACGAC+GGG - chr8_3:68630029-68630048 Msa1305250:intron 50.0%
! ACCCGTCGTCTCAAGAGTAT+TGG + chr8_3:68630033-68630052 None:intergenic 50.0%
TACTCTTGAGACGACGGGTA+AGG - chr8_3:68630034-68630053 Msa1305250:intron 50.0%
CAGGTTTGAGCCAGATATGC+TGG - chr8_3:68630717-68630736 Msa1305250:intron 50.0%
ACTGCCCCATGGGTGATAAA+AGG + chr8_3:68630890-68630909 None:intergenic 50.0%
AGTCAGGATTACTGCCCCAT+GGG + chr8_3:68630900-68630919 None:intergenic 50.0%
AAGTCAGGATTACTGCCCCA+TGG + chr8_3:68630901-68630920 None:intergenic 50.0%
CCCACTTCATGAGGAGTAAG+AGG + chr8_3:68631278-68631297 None:intergenic 50.0%
TTTCCCCCGATGCAACATAC+AGG + chr8_3:68631340-68631359 None:intergenic 50.0%
CATCGGGGGAAATATACGGT+GGG - chr8_3:68631348-68631367 Msa1305250:CDS 50.0%
ATCGGGGGAAATATACGGTG+GGG - chr8_3:68631349-68631368 Msa1305250:CDS 50.0%
! AAGATCTCTGAGAGGCTGCA+TGG + chr8_3:68631381-68631400 None:intergenic 50.0%
TACAAAGGAGATGCTTGCCG+AGG - chr8_3:68631415-68631434 Msa1305250:intron 50.0%
GTAATCAACAGCAGCTAGGC+GGG + chr8_3:68631471-68631490 None:intergenic 50.0%
ACAACAACGGTAACATGGCC+AGG - chr8_3:68631525-68631544 Msa1305250:intron 50.0%
AACATGGCCAGGATTCTTGC+TGG - chr8_3:68631536-68631555 Msa1305250:intron 50.0%
CCTTTGACCAGCAAGAATCC+TGG + chr8_3:68631546-68631565 None:intergenic 50.0%
CCAGGATTCTTGCTGGTCAA+AGG - chr8_3:68631543-68631562 Msa1305250:intron 50.0%
GTTCATGGCGAGGCATGAAA+TGG - chr8_3:68631707-68631726 Msa1305250:intron 50.0%
! AAGGTAAAGGCGTGCCAAAG+AGG - chr8_3:68631750-68631769 Msa1305250:intron 50.0%
GCGTGCCAAAGAGGATTCAT+GGG - chr8_3:68631759-68631778 Msa1305250:intron 50.0%
GCTCTCCCATGAATCCTCTT+TGG + chr8_3:68631767-68631786 None:intergenic 50.0%
TAAATGCGAGCTTAGGTGGC+CGG + chr8_3:68631887-68631906 None:intergenic 50.0%
ACTGACGCCGAAATAAACGG+AGG - chr8_3:68631924-68631943 Msa1305250:intron 50.0%
CGGCAAAGCAACTCAGTTAC+TGG - chr8_3:68632417-68632436 Msa1305250:five_prime_UTR 50.0%
CGTCACATGAGGCTACATGT+GGG - chr8_3:68632492-68632511 Msa1305250:five_prime_UTR 50.0%
GTTAGAAGTCCCACGTTGCC+TGG - chr8_3:68627866-68627885 Msa1305250:intron 55.0%
TCCCACGTTGCCTGGAAAAG+TGG - chr8_3:68627874-68627893 Msa1305250:intron 55.0%
!! CTCCACTTTTCCAGGCAACG+TGG + chr8_3:68627879-68627898 None:intergenic 55.0%
CACGTTGCCTGGAAAAGTGG+AGG - chr8_3:68627877-68627896 Msa1305250:intron 55.0%
! TGGTTGCTTTGGGCCCAATG+TGG - chr8_3:68627982-68628001 Msa1305250:CDS 55.0%
TACTGACGACTGGGTCACGA+GGG + chr8_3:68628024-68628043 None:intergenic 55.0%
TACGGACACCGGACATGACA+CGG - chr8_3:68629295-68629314 Msa1305250:intron 55.0%
GTCAGTGTCCGTGTCATGTC+CGG + chr8_3:68629306-68629325 None:intergenic 55.0%
GGGACACGCATGGTATATGG+GGG + chr8_3:68629970-68629989 None:intergenic 55.0%
CGGGACACGCATGGTATATG+GGG + chr8_3:68629971-68629990 None:intergenic 55.0%
CTCGGGACACGCATGGTATA+TGG + chr8_3:68629973-68629992 None:intergenic 55.0%
CATATACCATGCGTGTCCCG+AGG - chr8_3:68629971-68629990 Msa1305250:intron 55.0%
TGATTTCCTCGGGACACGCA+TGG + chr8_3:68629980-68629999 None:intergenic 55.0%
CACGCTTTCGTTCTCCGTCA+GGG + chr8_3:68631247-68631266 None:intergenic 55.0%
! CTGACGGAGAACGAAAGCGT+GGG - chr8_3:68631246-68631265 Msa1305250:intron 55.0%
GCATCGGGGGAAATATACGG+TGG - chr8_3:68631347-68631366 Msa1305250:CDS 55.0%
GAAGCTTAGCGCGCTGTTCA+TGG - chr8_3:68631692-68631711 Msa1305250:intron 55.0%
TGGCGAGGCATGAAATGGAC+CGG - chr8_3:68631712-68631731 Msa1305250:intron 55.0%
GGCGTGCCAAAGAGGATTCA+TGG - chr8_3:68631758-68631777 Msa1305250:intron 55.0%
AGAGGATTCATGGGAGAGCC+AGG - chr8_3:68631768-68631787 Msa1305250:intron 55.0%
GAGCCAGGAGAGATGAAAGC+TGG - chr8_3:68631783-68631802 Msa1305250:intron 55.0%
CGTCCAGCTTTCATCTCTCC+TGG + chr8_3:68631789-68631808 None:intergenic 55.0%
GGAGAGATGAAAGCTGGACG+AGG - chr8_3:68631789-68631808 Msa1305250:intron 55.0%
!! GAAGAGCTCCAGCTTGCTGT+AGG + chr8_3:68632359-68632378 None:intergenic 55.0%
!! GAACGGATTGGCGTCACATG+AGG - chr8_3:68632481-68632500 Msa1305250:five_prime_UTR 55.0%
GCGTCACATGAGGCTACATG+TGG - chr8_3:68632491-68632510 Msa1305250:five_prime_UTR 55.0%
CGGCAATGGACGATTAGAGC+TGG - chr8_3:68632528-68632547 Msa1305250:five_prime_UTR 55.0%
ACTGACGACTGGGTCACGAG+GGG + chr8_3:68628023-68628042 None:intergenic 60.0%
CTACTGACGACTGGGTCACG+AGG + chr8_3:68628025-68628044 None:intergenic 60.0%
TTGCTTATTGCCGCGAGCGG+AGG - chr8_3:68628952-68628971 Msa1305250:intron 60.0%
TTGGTTCAGTCCTCCGCTCG+CGG + chr8_3:68628965-68628984 None:intergenic 60.0%
CCACGCTTTCGTTCTCCGTC+AGG + chr8_3:68631248-68631267 None:intergenic 60.0%
CCTGACGGAGAACGAAAGCG+TGG - chr8_3:68631245-68631264 Msa1305250:intron 60.0%
GGTTTGATGCTGCGAGCGCT+TGG - chr8_3:68631296-68631315 Msa1305250:intron 60.0%
TTAGCGCGCTGTTCATGGCG+AGG - chr8_3:68631697-68631716 Msa1305250:intron 60.0%
!! GAGCTCCAGCTTGCTGTAGG+TGG + chr8_3:68632356-68632375 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 68626907 68632593 68626907 ID=Msa1305250;Name=Msa1305250
chr8_3 mRNA 68626907 68632593 68626907 ID=Msa1305250-mRNA-1;Parent=Msa1305250;Name=Msa1305250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=444|1|1|1|0.88|0.8|10|481|538
chr8_3 exon 68626907 68627189 68626907 ID=Msa1305250-mRNA-1:exon:21256;Parent=Msa1305250-mRNA-1
chr8_3 exon 68627307 68627850 68627307 ID=Msa1305250-mRNA-1:exon:21255;Parent=Msa1305250-mRNA-1
chr8_3 exon 68627936 68628264 68627936 ID=Msa1305250-mRNA-1:exon:21254;Parent=Msa1305250-mRNA-1
chr8_3 exon 68628678 68628780 68628678 ID=Msa1305250-mRNA-1:exon:21253;Parent=Msa1305250-mRNA-1
chr8_3 exon 68629092 68629273 68629092 ID=Msa1305250-mRNA-1:exon:21252;Parent=Msa1305250-mRNA-1
chr8_3 exon 68629450 68629639 68629450 ID=Msa1305250-mRNA-1:exon:21251;Parent=Msa1305250-mRNA-1
chr8_3 exon 68629782 68629870 68629782 ID=Msa1305250-mRNA-1:exon:21250;Parent=Msa1305250-mRNA-1
chr8_3 exon 68630504 68630580 68630504 ID=Msa1305250-mRNA-1:exon:21249;Parent=Msa1305250-mRNA-1
chr8_3 exon 68631307 68631397 68631307 ID=Msa1305250-mRNA-1:exon:21248;Parent=Msa1305250-mRNA-1
chr8_3 exon 68631940 68632593 68631940 ID=Msa1305250-mRNA-1:exon:21247;Parent=Msa1305250-mRNA-1
chr8_3 five_prime_UTR 68632150 68632593 68632150 ID=Msa1305250-mRNA-1:five_prime_utr;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68631940 68632149 68631940 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68631307 68631397 68631307 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68630504 68630580 68630504 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68629782 68629870 68629782 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68629450 68629639 68629450 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68629092 68629273 68629092 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68628678 68628780 68628678 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68627936 68628264 68627936 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 CDS 68627505 68627850 68627505 ID=Msa1305250-mRNA-1:cds;Parent=Msa1305250-mRNA-1
chr8_3 three_prime_UTR 68627307 68627504 68627307 ID=Msa1305250-mRNA-1:three_prime_utr;Parent=Msa1305250-mRNA-1
chr8_3 three_prime_UTR 68626907 68627189 68626907 ID=Msa1305250-mRNA-1:three_prime_utr;Parent=Msa1305250-mRNA-1
Gene Sequence

>Msa1305250

ATGGGTGTGGTGAAGTCGTGGTTGTTATCCACGAACCACACTCACTCTAACACCAAAAATGCCATCTGTTCGAGATCCATTCCATGGTCGGTCATTTGCGGTTTCATGCTTTTCGGGTTGGGTCTCATTTCTCTTTTAACCGGTCACGTTGTTTCTCATCTTGAATGGTACTCTCAACGATTCGTTCACCGCAGTTTCTTCTCTACACTGGATGGAAATGATCATGCGCCAATTGATATTTGGGAATCACAATATTCTAAATACTACTACGGATGCAAAGAAAGGGGACGTCATTTTTATCCTGCTATACGCGAGCGCATGTCAAATGGCTACTTGCTTATTGCCGCGAGCGGAGGACTGAACCAACAAAGAACTGGGATAACTGATGCTGTTGTTGTTGCACGGATTCTTAATGCCACACTTGTTGTACCTGAGTTGGATCATAATTCTTTTTGGAAGGATGACAGTGACTTCGCCAACATTTTCGATGTTAATTGGTTCATTAATTATCTGGCAAAAGATGTTACTATTGTTAAAAGAGTTCCAGATAAGGTCATGCGGTCAATGGATAAACCCCCATATACCATGCGTGTCCCGAGGAAATCAGATCCTGAATATTATCTTGATCAAGTTTTGCCAATACTCTTGAGACGACGGGTTCTACAATTGACGAAGTTTGACTATAGACTTGCCAATGACCTTGATGATGAACTACAAAAACTACGTTGCCGTGTTAATTATCATGCTTTGAGATTTACAAAACCAATACGACAACTTGGTCAAAAAATTGTAATGAGGATGCGAAAGATGGCAAACCGTTATATAGCAGTCCATTTGAGGTTTGAGCCAGATATGCTGGCATTTTCAGGTTGTTATTTTGGTGGGGGTGAAAAAGAAAGACAAGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTGCCTGATTTGAGCCCTGACGGAGAACGAAAGCGTGGGAAATGTCCTCTTACTCCTCATGAAGTGGGTTTGATGCTGCGAGCGCTTGGTTATACAAATGACACATACCTGTATGTTGCATCGGGGGAAATATACGGTGGGGATGAAACCATGCAGCCTCTCAGAGATCTTTTCCCCAACATCTATACAAAGGAGATGCTTGCCGAGGAAGAATTGAAACCTTTTCTTTCATTCTCTTCCCGCCTAGCTGCTGTTGATTACATTGTTTGTGATGAAAGTAATGTATTTGTTGCTAACAACAACGGTAACATGGCCAGGATTCTTGCTGGTCAAAGGCGATATATGGGTCACAAGAGAACCATTAGACCAAATGCAAAGAAGCTTAGCGCGCTGTTCATGGCGAGGCATGAAATGGACCGGAATACATTTTCGAGAAAGGTAAAGGCGTGCCAAAGAGGATTCATGGGAGAGCCAGGAGAGATGAAAGCTGGACGAGGAGAGTTTCATGAATATCCAAGCACTTGTGTCTGTGAGAAACCATTTATAGACGAATTGAGTGAAGATGGAATCCGGCCACCTAAGCTCGCATTTAGAAATCTGACAATAGGAACTGACGCCGAAATAAACGGAGGAAATGAAGAAAGTTTTGAGCTACCAAAGCCAAATGAGAGAACATATTAA
Protein sequence

>Msa1305250

MGVVKSWLLSTNHTHSNTKNAICSRSIPWSVICGFMLFGLGLISLLTGHVVSHLEWYSQRFVHRSFFSTLDGNDHAPIDIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQKIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPDLSPDGERKRGKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKEMLAEEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRYMGHKRTIRPNAKKLSALFMARHEMDRNTFSRKVKACQRGFMGEPGEMKAGRGEFHEYPSTCVCEKPFIDELSEDGIRPPKLAFRNLTIGTDAEINGGNEESFELPKPNERTY*