AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0851160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0851160 MtrunA17_Chr5g0427251 98.862 1230 13 1 1 1229 1 1230 0.0 2534
Msa0851160 MtrunA17_Chr5g0448351 45.393 1042 492 15 214 1229 207 1197 0.0 903
Msa0851160 MtrunA17_Chr5g0401841 61.667 60 14 2 644 694 4 63 3.05e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0851160 AT4G24610.1 62.648 1186 395 12 47 1229 10 1150 0.0 1495
Msa0851160 AT4G24610.3 62.679 1187 397 12 47 1229 10 1154 0.0 1493
Msa0851160 AT4G24610.4 62.595 1187 395 13 47 1229 10 1151 0.0 1491
Msa0851160 AT4G24610.2 62.626 1188 397 13 47 1229 10 1155 0.0 1489
Msa0851160 AT5G65440.1 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0851160 AT5G65440.8 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0851160 AT5G65440.9 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0851160 AT5G65440.6 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0851160 AT5G65440.4 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0851160 AT5G65440.7 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0851160 AT5G65440.3 54.573 973 401 5 292 1229 159 1125 0.0 1114
Msa0851160 AT5G65440.2 53.854 947 416 8 229 1160 43 983 0.0 1044
Msa0851160 AT5G65440.5 56.766 872 368 5 292 1160 159 1024 0.0 1042
Msa0851160 AT5G48310.2 43.744 1031 500 17 221 1229 156 1128 0.0 858
Msa0851160 AT5G48310.1 45.955 927 439 13 314 1229 280 1155 0.0 850

Find 298 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTAATTCTTTAGGTTTA+AGG 0.101745 5_4:+41240017 Msa0851160:five_prime_UTR
GTACTTGATTCTGCTTTATT+TGG 0.141623 5_4:-41241448 None:intergenic
ACAGAGTTTGCTTCATATTA+TGG 0.161719 5_4:+41243489 Msa0851160:CDS
GTAAATAAAGAGGGTTATTA+AGG 0.183967 5_4:+41247418 Msa0851160:three_prime_UTR
CTTCTGGTTGGCACGCTCTT+AGG 0.188615 5_4:+41242398 Msa0851160:CDS
AGCATGGCACCTAAGAAATT+TGG 0.201534 5_4:+41245849 Msa0851160:CDS
GATTCCAAGGGAAAGCATTT+TGG 0.208871 5_4:+41242989 Msa0851160:CDS
CGCGTCTTTGCCTTCACGCT+TGG 0.211183 5_4:+41241903 Msa0851160:CDS
TAGACCGTTTGGCAAGTTTC+TGG 0.237058 5_4:-41245884 None:intergenic
GCTTACTCCTGCTACAAAAT+TGG 0.256730 5_4:-41247480 None:intergenic
GATTCGGAAGAGGAAGTTTA+TGG 0.256978 5_4:+41240605 Msa0851160:CDS
TATTTAAGCCCAAATTTCTT+AGG 0.261853 5_4:-41245858 None:intergenic
TTGCCATCTGTCGAGGTTAT+TGG 0.267012 5_4:+41246806 Msa0851160:CDS
TGCATAAAGCTTAATTCTTT+AGG 0.276770 5_4:+41240010 Msa0851160:five_prime_UTR
CTATTTCCCTTCATGATAAC+AGG 0.279831 5_4:-41243721 None:intergenic
AGTGACACATAAAATTAAAA+TGG 0.285788 5_4:+41242333 Msa0851160:CDS
TCTTGAGTAGAACCACAAAA+TGG 0.289207 5_4:-41241376 None:intergenic
TCCATGGACCATGTAATTCT+AGG 0.298952 5_4:-41243455 None:intergenic
TACCACCACCATCAAAATTT+AGG 0.302751 5_4:+41240495 Msa0851160:CDS
TTAATATGCTCTTCACTTAC+TGG 0.302787 5_4:+41247528 Msa0851160:three_prime_UTR
CATACCTTGCACAGCTTCAT+AGG 0.304708 5_4:-41242566 None:intergenic
TCCATTTGTATATTCTTGTT+TGG 0.307399 5_4:+41245255 Msa0851160:CDS
TCACAGATGCAACAACTTCT+AGG 0.308271 5_4:+41247267 Msa0851160:CDS
ATTCAGAGGTTGGTTCTATT+AGG 0.312085 5_4:+41240064 Msa0851160:five_prime_UTR
TTCACCATTAGCTCCTCTTC+TGG 0.318680 5_4:-41242097 None:intergenic
TAGGTTTAAGGTTTCAAAAT+TGG 0.319415 5_4:+41240029 Msa0851160:five_prime_UTR
AAACCCTGTGCATAAATCTT+AGG 0.320391 5_4:+41244543 Msa0851160:CDS
GCATCCACTCCACCTTTGAT+AGG 0.324289 5_4:-41245221 None:intergenic
TGCCATCTGTCGAGGTTATT+GGG 0.326097 5_4:+41246807 Msa0851160:CDS
CAGAAACTGGTTTGGGCCTC+AGG 0.332585 5_4:-41244296 None:intergenic
ATAAAATAACTTACAACATA+TGG 0.335183 5_4:-41242857 None:intergenic
TTATGGTGGAAGGTATTCTT+TGG 0.335278 5_4:+41240622 Msa0851160:CDS
TCTAGAACCAAGGTATATTC+TGG 0.337993 5_4:-41245566 None:intergenic
ATGATAATCAATCAATCATA+TGG 0.346525 5_4:+41247451 Msa0851160:three_prime_UTR
ATGAAAAGTGGCGGCGGTAG+AGG 0.350205 5_4:+41240464 Msa0851160:CDS
CAGTTTCTGTCACTACTTCC+AGG 0.351135 5_4:+41244310 Msa0851160:CDS
AGAAGTTGCAATGAAAGTTC+AGG 0.359320 5_4:+41243416 Msa0851160:CDS
AGTGGCGGCGGTAGAGGGTT+TGG 0.359656 5_4:+41240470 Msa0851160:CDS
AATGGTGCTGCTAAGAGATA+TGG 0.361058 5_4:+41240674 Msa0851160:CDS
AAATCATCTCCAAGACTATC+TGG 0.365820 5_4:-41242950 None:intergenic
GAGAATAGATCATGGTATAA+AGG 0.367349 5_4:+41246976 Msa0851160:CDS
GCAAAGCTCTGTGCTGTATA+TGG 0.367805 5_4:-41244965 None:intergenic
TGAAAGATCTCTTTGAAAAT+CGG 0.369680 5_4:-41245067 None:intergenic
GCATGGCACCTAAGAAATTT+GGG 0.379782 5_4:+41245850 Msa0851160:CDS
AAACTGTTGTCCTTGTGATT+AGG 0.380356 5_4:-41247366 None:intergenic
GCAAAGATAGACGTTTATCT+TGG 0.381941 5_4:-41245280 None:intergenic
TTGCAGTCAAAACTATCTTC+TGG 0.383266 5_4:+41242382 Msa0851160:CDS
GCGTCTTTGCCTTCACGCTT+GGG 0.385460 5_4:+41241904 Msa0851160:CDS
TGTGTCAGGGAACCATTTGC+AGG 0.387579 5_4:-41242445 None:intergenic
GGTGCTGTGTTTCCAGCATT+TGG 0.390436 5_4:-41246113 None:intergenic
TATCTGTTCAATTTCGTCCT+TGG 0.391761 5_4:-41244126 None:intergenic
TTGAACTGTGATTCAATCCT+TGG 0.396509 5_4:-41246071 None:intergenic
CTTGATGAGTCATCTTTCTC+TGG 0.397406 5_4:+41244179 Msa0851160:CDS
AAAGTTCAGGAACTACTTGC+AGG 0.398147 5_4:+41246175 Msa0851160:CDS
CAAGGCAGGAGCTGCATGAC+TGG 0.398224 5_4:-41244228 None:intergenic
GAATAATGAAAGCTGTTTGA+TGG 0.399448 5_4:+41244484 Msa0851160:CDS
CTGGAAGTAGTGACAGAAAC+TGG 0.403028 5_4:-41244309 None:intergenic
CTTTGAACATTCATCCTTGA+AGG 0.404054 5_4:-41240971 None:intergenic
CTTTACTTAGAGATGCATTT+GGG 0.409059 5_4:+41241972 Msa0851160:CDS
TCGTCCAGAGAAACACTTAC+TGG 0.409705 5_4:+41240758 Msa0851160:CDS
TGTGAATCAGAAACCGTAAT+GGG 0.415519 5_4:-41239881 None:intergenic
AAGGCGAGGTGGTTGTGAAT+TGG 0.418037 5_4:-41241729 None:intergenic
TAGCGGTTCAAATAGTGATA+TGG 0.420595 5_4:+41240571 Msa0851160:CDS
TATCTCTTAGCAGCACCATT+GGG 0.421520 5_4:-41240671 None:intergenic
TAGTTGAAGAAGACGCCATT+AGG 0.423070 5_4:+41242811 Msa0851160:CDS
TAAATAAAGAGGGTTATTAA+GGG 0.426330 5_4:+41247419 Msa0851160:three_prime_UTR
TATGGACGCCAGCGTTGATT+CGG 0.426775 5_4:+41240589 Msa0851160:CDS
CGCTTGGGCGATGCAGTGTA+TGG 0.427505 5_4:+41241919 Msa0851160:CDS
GGCACGCTCTTAGGAAAGTT+CGG 0.428629 5_4:+41242407 Msa0851160:CDS
AATTACATGGTCCATGGAAA+TGG 0.428646 5_4:+41243460 Msa0851160:CDS
TTAGCAGCACTCCTCATTAC+CGG 0.429720 5_4:-41240803 None:intergenic
TCTTCCAGTAAGTGTTTCTC+TGG 0.430514 5_4:-41240762 None:intergenic
TCTTTACTTAGAGATGCATT+TGG 0.430566 5_4:+41241971 Msa0851160:CDS
AATACTGTGAAGATAGCTTA+TGG 0.431220 5_4:-41246764 None:intergenic
GTACTTTGAAATCTGTATCC+AGG 0.431525 5_4:+41241467 Msa0851160:CDS
CTTGAGTAGAACCACAAAAT+GGG 0.433325 5_4:-41241375 None:intergenic
GCAAATTATATACCAAGTTA+AGG 0.434428 5_4:-41243693 None:intergenic
GATGTCGAGCATCCTCTTCA+AGG 0.434680 5_4:-41246042 None:intergenic
TGCAGCTCCTGCCTTGGAAC+CGG 0.440849 5_4:+41244235 Msa0851160:CDS
TGTTATTCATTGTAATACTT+TGG 0.442744 5_4:+41247592 Msa0851160:three_prime_UTR
GGCTGCTATCGCTGATAATC+CGG 0.442816 5_4:+41243030 Msa0851160:CDS
CATTCCTAAGATTTATGCAC+AGG 0.442823 5_4:-41244547 None:intergenic
GTGGGGCTCGACCCTCCTAC+TGG 0.443564 5_4:+41242292 Msa0851160:CDS
TGATGCTGAGAGCAAAGTTC+AGG 0.447811 5_4:+41246162 Msa0851160:CDS
TGCTAATAAGTTACCTGTCT+CGG 0.449263 5_4:+41240532 Msa0851160:CDS
TGTTCAAAGTTCTGCAGAAA+AGG 0.451148 5_4:+41240985 Msa0851160:CDS
AGATCTCGTGATCCGATTAG+TGG 0.452469 5_4:+41240440 Msa0851160:CDS
GTACCACATTTGCCTGCAAA+TGG 0.452983 5_4:+41242433 Msa0851160:CDS
TCAAATCTCGAACCCCATTA+CGG 0.453669 5_4:+41239868 Msa0851160:five_prime_UTR
GAACTACTTGCAGGCTATTG+TGG 0.456163 5_4:+41246184 Msa0851160:CDS
CTCTCTAAGCTTAATATCAA+AGG 0.459245 5_4:+41239801 Msa0851160:five_prime_UTR
TTAACAGCCGGTTCCAAGGC+AGG 0.459389 5_4:-41244242 None:intergenic
ATTCATTGTAATACTTTGGT+AGG 0.459523 5_4:+41247596 Msa0851160:three_prime_UTR
CAGAACTGCTACTGGTTCAG+AGG 0.460004 5_4:+41241694 Msa0851160:intron
GGATCCAGGCTGCAACCTAA+TGG 0.460520 5_4:-41242826 None:intergenic
AACAGCAGATTGCCTTAACT+TGG 0.461204 5_4:+41243681 Msa0851160:CDS
TTGCTCAGATGCCACGGTCT+CGG 0.463158 5_4:+41240702 Msa0851160:CDS
ATATCTCTTAGCAGCACCAT+TGG 0.463834 5_4:-41240672 None:intergenic
CGAACCTCCATGATGCATCT+AGG 0.464652 5_4:-41247321 None:intergenic
AGTAGTGACAGAAACTGGTT+TGG 0.467102 5_4:-41244304 None:intergenic
AGCAGGGCTTATATGTCAGC+AGG 0.469725 5_4:+41240932 Msa0851160:CDS
AGATGACAATAGTCATCTTA+AGG 0.472987 5_4:+41243237 Msa0851160:CDS
CGCTATATACAACAAGTCTC+TGG 0.473262 5_4:+41242499 Msa0851160:CDS
GAACCAGACCATGAGCTTGT+TGG 0.474020 5_4:+41243178 Msa0851160:CDS
GGTGCCATGCTATCTTTAAG+AGG 0.479202 5_4:-41245837 None:intergenic
GATCATGGTATAAAGGTTCA+AGG 0.479291 5_4:+41246983 Msa0851160:CDS
GTAATGAGGAGTGCTGCTAA+TGG 0.479572 5_4:+41240806 Msa0851160:CDS
ATAATCAAAATATACTTCCT+AGG 0.479944 5_4:+41244594 Msa0851160:CDS
GCTTCTTGCTTACCAAATGC+TGG 0.480620 5_4:+41246101 Msa0851160:CDS
TTGAATCACAGTTCAAATCA+TGG 0.480727 5_4:+41246078 Msa0851160:CDS
TATATGGAAGCAGAAAGATT+TGG 0.484202 5_4:-41244949 None:intergenic
TCCAAACAAGAATATACAAA+TGG 0.484801 5_4:-41245256 None:intergenic
TTACAACATATGGACTTCAC+TGG 0.488136 5_4:-41242847 None:intergenic
TCTTATCAGAATCGACTACT+AGG 0.490024 5_4:+41244098 Msa0851160:intron
TCTCTAAGCTTAATATCAAA+GGG 0.490643 5_4:+41239802 Msa0851160:five_prime_UTR
CAGTCATGCAGCTCCTGCCT+TGG 0.491978 5_4:+41244229 Msa0851160:CDS
CAAGCTCATGGTCTGGTTCA+CGG 0.492655 5_4:-41243174 None:intergenic
CTCATTGCTGTGTTTGAGAA+TGG 0.493046 5_4:-41240419 None:intergenic
TAAATTCAACCCACCTCCTC+AGG 0.493294 5_4:-41245924 None:intergenic
GTACTACGTGTTGCAGAAGT+TGG 0.493392 5_4:-41241424 None:intergenic
ATAGGCACATGTAGACCGTT+TGG 0.494429 5_4:-41245895 None:intergenic
GTTTACTTGCTTAATCAGAA+AGG 0.494637 5_4:-41239829 None:intergenic
GAAGTTGCAATGAAAGTTCA+GGG 0.494648 5_4:+41243417 Msa0851160:CDS
ATTAAGTTACCTGTCCCATT+CGG 0.494879 5_4:-41246831 None:intergenic
GCTTGCACCTGTTATCATGA+AGG 0.496805 5_4:+41243714 Msa0851160:CDS
TTCAAAGAGATCTTTCAGGC+TGG 0.497753 5_4:+41245073 Msa0851160:CDS
ACGCCCAAAATGCTTTCCCT+TGG 0.498791 5_4:-41242993 None:intergenic
CTTGCACCTGTTATCATGAA+GGG 0.500960 5_4:+41243715 Msa0851160:CDS
AGCATATTAATCTTGTTCCT+AGG 0.501315 5_4:-41247515 None:intergenic
ATGCTTCTAGTGTACCTTCA+AGG 0.501694 5_4:+41240957 Msa0851160:CDS
TCAACCAGAAGAGGAGCTAA+TGG 0.506702 5_4:+41242093 Msa0851160:CDS
ACAAGGAATGACGAGGGATC+CGG 0.506996 5_4:+41240784 Msa0851160:CDS
GGAGCTGCATGACTGGATGC+TGG 0.507579 5_4:-41244221 None:intergenic
CTTCTTAGTCCTATCAAAGG+TGG 0.511888 5_4:+41245212 Msa0851160:intron
TTGCCAACAAGCTCATGGTC+TGG 0.512703 5_4:-41243181 None:intergenic
ATATGGACTTCACTGGATCC+AGG 0.515067 5_4:-41242840 None:intergenic
GAAGATTCTTCAAGATTCAA+AGG 0.515408 5_4:+41246678 Msa0851160:CDS
CTCATATCTTGTCCACCGAC+AGG 0.515457 5_4:+41245006 Msa0851160:CDS
AGTTCTGCTACTGGTGATGA+TGG 0.517116 5_4:-41245030 None:intergenic
CGAGGTTATTGGGACCGAAT+GGG 0.517152 5_4:+41246817 Msa0851160:CDS
AAGTTGGTGTAACAACTTTG+CGG 0.517995 5_4:+41242530 Msa0851160:CDS
TCGGAAGAGGAAGTTTATGG+TGG 0.518785 5_4:+41240608 Msa0851160:CDS
GCAGTACGCAAAGTCAAAGT+GGG 0.519161 5_4:+41242274 Msa0851160:intron
TGATACCTTGCATGAAATGT+TGG 0.522674 5_4:-41241752 None:intergenic
CAATACACATGTAAATAAAG+AGG 0.523131 5_4:+41247408 Msa0851160:three_prime_UTR
TGAATCACAGTTCAAATCAT+GGG 0.525286 5_4:+41246079 Msa0851160:CDS
TTGGGGACTCTGTTGTCTTG+TGG 0.525829 5_4:-41240653 None:intergenic
AAAACTTATTGGCAAGATGA+AGG 0.526439 5_4:+41242165 Msa0851160:CDS
ATGGTTCTCTAACTTATCCC+TGG 0.527134 5_4:-41241485 None:intergenic
CATTGAAGTTCAAGATTCCA+AGG 0.529687 5_4:+41242976 Msa0851160:CDS
TCGAGGTTATTGGGACCGAA+TGG 0.530623 5_4:+41246816 Msa0851160:CDS
TATATTCATCTGTGTCAGAA+AGG 0.531164 5_4:-41244454 None:intergenic
GTGAAGGCAAAGACGCGCAC+AGG 0.531948 5_4:-41241897 None:intergenic
GTCTCTGGACTCCTAAAAGT+TGG 0.532031 5_4:+41242514 Msa0851160:CDS
TGCGTTCACAGAACTGCTAC+TGG 0.533287 5_4:+41241686 Msa0851160:intron
TAAGCAACTCAACTGCTCCT+AGG 0.533539 5_4:+41247498 Msa0851160:three_prime_UTR
TTTCCGAGCTTGCATCTCCA+TGG 0.536492 5_4:-41241504 None:intergenic
AGCTTGTAAAGTTTAACAGC+CGG 0.536736 5_4:-41244254 None:intergenic
ACCTAGAATTACATGGTCCA+TGG 0.537176 5_4:+41243454 Msa0851160:CDS
AAGTTCAGGGCTTTCAGCAA+AGG 0.539878 5_4:+41243430 Msa0851160:CDS
CGCCAGCGTTGATTCGGAAG+AGG 0.540156 5_4:+41240595 Msa0851160:CDS
GAGACAGGTAACTTATTAGC+AGG 0.540938 5_4:-41240530 None:intergenic
GACGCCATTAGGTTGCAGCC+TGG 0.541548 5_4:+41242822 Msa0851160:CDS
CTAGCTAACTGCTCTTTCAG+TGG 0.542632 5_4:-41246739 None:intergenic
AAGTTTAACAGCCGGTTCCA+AGG 0.542939 5_4:-41244246 None:intergenic
GCTGCTAATGGAAGGCAGAA+TGG 0.544705 5_4:+41240818 Msa0851160:CDS
CTGTCGGTGGACAAGATATG+AGG 0.545131 5_4:-41245005 None:intergenic
TATCAGCGATAGCAGCCACT+TGG 0.545567 5_4:-41243024 None:intergenic
GTAGTGACAGAAACTGGTTT+GGG 0.545700 5_4:-41244303 None:intergenic
TAATATGCTCTTCACTTACT+GGG 0.545823 5_4:+41247529 Msa0851160:three_prime_UTR
GCCTTCCAACATTTCATGCA+AGG 0.546520 5_4:+41241747 Msa0851160:CDS
CCGCTGGCCAGAATATACCT+TGG 0.546895 5_4:+41245559 Msa0851160:CDS
TACTTTGAAATCTGTATCCA+GGG 0.547378 5_4:+41241468 Msa0851160:CDS
TTATTGGGACCGAATGGGAC+AGG 0.547657 5_4:+41246822 Msa0851160:CDS
ATGACTATTGTCATCTGCAC+TGG 0.548196 5_4:-41243230 None:intergenic
ATGGTGCTGCTAAGAGATAT+GGG 0.549903 5_4:+41240675 Msa0851160:CDS
TAGATATCTATCGTATGTCA+TGG 0.550386 5_4:+41243645 Msa0851160:intron
GTGTGAATCAGAAACCGTAA+TGG 0.552337 5_4:-41239882 None:intergenic
TGATAATCAATCAATCATAT+GGG 0.552944 5_4:+41247452 Msa0851160:three_prime_UTR
TTCCTTCTTAGTCCTATCAA+AGG 0.554631 5_4:+41245209 Msa0851160:intron
AGCTCCTCTTAAAGATAGCA+TGG 0.555560 5_4:+41245833 Msa0851160:CDS
TGATACCTCTTGGTGGCTCA+AGG 0.555917 5_4:-41243752 None:intergenic
TTCCCTGACACATAAAAGCT+TGG 0.559129 5_4:+41242456 Msa0851160:CDS
ACAGAAAAGAGAATAGATCA+TGG 0.559892 5_4:+41246968 Msa0851160:CDS
TCATGATATCTTATCTCCTG+AGG 0.562589 5_4:+41244280 Msa0851160:CDS
CAAGTAGGGAGTAGTATCAA+TGG 0.563189 5_4:+41240896 Msa0851160:CDS
GTTTCTGATTCACACTTCTG+TGG 0.564909 5_4:+41239890 Msa0851160:five_prime_UTR
GAACCATTTGCAGGCAAATG+TGG 0.565898 5_4:-41242436 None:intergenic
GAGCTAATGGTGAAATGCAA+TGG 0.566880 5_4:+41242106 Msa0851160:CDS
GGATGATTCGTCGGATTCTG+CGG 0.568196 5_4:+41240850 Msa0851160:CDS
ACGGTCTACATGTGCCTATG+TGG 0.568735 5_4:+41245899 Msa0851160:CDS
ATGTCCAGAAACTTGCCAAA+CGG 0.569380 5_4:+41245880 Msa0851160:CDS
TCATACATGTCATCAACAAA+GGG 0.569455 5_4:-41245494 None:intergenic
CCGATTAGTGGAATGAAAAG+TGG 0.570072 5_4:+41240452 Msa0851160:CDS
TGACGAGGGATCCGGTAATG+AGG 0.570148 5_4:+41240792 Msa0851160:CDS
GTATCTTGCCAACAAGCTCA+TGG 0.570307 5_4:-41243186 None:intergenic
CTCATACATGTCATCAACAA+AGG 0.571246 5_4:-41245495 None:intergenic
AAGAGGAAGTTTATGGTGGA+AGG 0.571425 5_4:+41240612 Msa0851160:CDS
GCAATGACAAGTTCTGCTAC+TGG 0.573441 5_4:-41245039 None:intergenic
TTTCACTGAGGATGATTCGT+CGG 0.574054 5_4:+41240841 Msa0851160:CDS
TGCCTATGTGGTTCCTGAGG+AGG 0.575224 5_4:+41245911 Msa0851160:CDS
CAAAGGAACCTAGAATTACA+TGG 0.575331 5_4:+41243447 Msa0851160:CDS
GACATGCTACATCCAGTAGG+AGG 0.575791 5_4:-41242304 None:intergenic
TCTGTCAAGAGCCATTTCCA+TGG 0.578372 5_4:-41243471 None:intergenic
GGAAACATTGACAGACTATG+AGG 0.579854 5_4:+41245526 Msa0851160:CDS
ATGAGGTCATCATTTGCCGC+TGG 0.580095 5_4:+41245543 Msa0851160:CDS
TGAAAAGTGGCGGCGGTAGA+GGG 0.581702 5_4:+41240465 Msa0851160:CDS
TGCAGTACGCAAAGTCAAAG+TGG 0.581751 5_4:+41242273 Msa0851160:intron
GAACCATGGAGATGCAAGCT+CGG 0.582420 5_4:+41241501 Msa0851160:CDS
TTGACTGCAAATTTGAGAAG+TGG 0.583581 5_4:-41242369 None:intergenic
ATCTTTCTCTGGAATCGTCG+AGG 0.584965 5_4:+41244190 Msa0851160:CDS
AATACACATGTAAATAAAGA+GGG 0.585161 5_4:+41247409 Msa0851160:three_prime_UTR
AGTCAAAACTATCTTCTGGT+TGG 0.585669 5_4:+41242386 Msa0851160:CDS
TGATATTGAGAAGGCGATTG+TGG 0.585814 5_4:+41245779 Msa0851160:CDS
GTCCCAATAACCTCGACAGA+TGG 0.586762 5_4:-41246809 None:intergenic
GGAGGCACCTAGATGCATCA+TGG 0.587292 5_4:+41247314 Msa0851160:CDS
TCCTCCTATGAAGCTGTGCA+AGG 0.588239 5_4:+41242562 Msa0851160:CDS
TGCTCGACATCTTACGTCCA+AGG 0.589561 5_4:+41246054 Msa0851160:CDS
AGTGCTTCTTCAACCAGAAG+AGG 0.591826 5_4:+41242084 Msa0851160:CDS
TGGAAGCAGAAAGATTTGGC+AGG 0.594188 5_4:-41244945 None:intergenic
TTCCTCTTCCGAATCAACGC+TGG 0.594375 5_4:-41240597 None:intergenic
TGAGGAGTGCTGCTAATGGA+AGG 0.594622 5_4:+41240810 Msa0851160:CDS
AAGTTAAGGCAATCTGCTGT+TGG 0.596013 5_4:-41243679 None:intergenic
CAATGGAGAACTTTCTAGTG+AGG 0.596450 5_4:+41242123 Msa0851160:CDS
AAATAAAGAGGGTTATTAAG+GGG 0.598297 5_4:+41247420 Msa0851160:three_prime_UTR
TCATTGCAACTTCTAGAACC+AGG 0.599580 5_4:-41243407 None:intergenic
TAGTCCTATCAAAGGTGGAG+TGG 0.600358 5_4:+41245217 Msa0851160:intron
CTTCTGGTAAGCGGTAGACA+TGG 0.603040 5_4:-41244516 None:intergenic
TTGAGTAGAACCACAAAATG+GGG 0.603689 5_4:-41241374 None:intergenic
AATGCTGGAAACACAGCACC+TGG 0.603796 5_4:+41246116 Msa0851160:CDS
GATACTACTCCCTACTTGTG+TGG 0.604286 5_4:-41240891 None:intergenic
GGCAATAGCTGATATTGAGA+AGG 0.610931 5_4:+41245770 Msa0851160:intron
GGAATGTTGCTCAGATGCCA+CGG 0.611258 5_4:+41240696 Msa0851160:CDS
ACCTTGCACAGCTTCATAGG+AGG 0.612295 5_4:-41242563 None:intergenic
CTGGAAGACAAGGAATGACG+AGG 0.612503 5_4:+41240777 Msa0851160:CDS
ATCATGGTATAAAGGTTCAA+GGG 0.614850 5_4:+41246984 Msa0851160:CDS
ATGTCGATGATACCTCTTGG+TGG 0.614897 5_4:-41243759 None:intergenic
AGCTTTAGATAAACAGTATG+CGG 0.619900 5_4:+41245803 Msa0851160:CDS
ACTGCATCGCCCAAGCGTGA+AGG 0.619920 5_4:-41241913 None:intergenic
GGCTATTGTGGAGAAACTCG+TGG 0.621189 5_4:+41246196 Msa0851160:CDS
ATGTGCCTATGTGGTTCCTG+AGG 0.623485 5_4:+41245908 Msa0851160:CDS
CACCTCCTCAGGAACCACAT+AGG 0.624978 5_4:-41245913 None:intergenic
CGCACTTAGATGGGTCAGAG+AGG 0.625042 5_4:+41240117 Msa0851160:CDS
ATTGAAGTTCAAGATTCCAA+GGG 0.625316 5_4:+41242977 Msa0851160:CDS
ATTCCTAAGATTTATGCACA+GGG 0.625437 5_4:-41244546 None:intergenic
TTAGGTAAGATGTTCACTGA+AGG 0.629124 5_4:+41240082 Msa0851160:exon
AATGGAGAACTTTCTAGTGA+GGG 0.631445 5_4:+41242124 Msa0851160:CDS
GAAACACTTACTGGAAGACA+AGG 0.633456 5_4:+41240767 Msa0851160:CDS
GAACTTTGCTCTCAGCATCA+CGG 0.635566 5_4:-41246159 None:intergenic
AGTGGAATGAAAAGTGGCGG+CGG 0.636709 5_4:+41240458 Msa0851160:CDS
TCAAGATTCAAAGGAAACAG+TGG 0.637389 5_4:+41246687 Msa0851160:CDS
ATCTCTTAGCAGCACCATTG+GGG 0.638124 5_4:-41240670 None:intergenic
AGGGATAAGTTAGAGAACCA+TGG 0.640988 5_4:+41241487 Msa0851160:CDS
CTGAGATTTATACGAAGCTG+AGG 0.642228 5_4:+41243517 Msa0851160:CDS
CGAGTCGTGCAAATTAGACA+AGG 0.642662 5_4:+41245304 Msa0851160:CDS
AGAACTGCTACTGGTTCAGA+GGG 0.643693 5_4:+41241695 Msa0851160:intron
ACTGGTGATGATGGACCTGT+CGG 0.643984 5_4:-41245021 None:intergenic
TGCGATACAAGAGAAAGACA+TGG 0.645035 5_4:+41247293 Msa0851160:CDS
TCGACTACTAGGAGAGACCA+AGG 0.647615 5_4:+41244109 Msa0851160:CDS
GATGACATGCTACATCCAGT+AGG 0.652898 5_4:-41242307 None:intergenic
GCATGAAATGTTGGAAGGCG+AGG 0.653114 5_4:-41241743 None:intergenic
GGAGACAGTTGCATATGACC+TGG 0.654916 5_4:+41243389 Msa0851160:CDS
AGTCTGACAAAGTACGCTGG+TGG 0.654966 5_4:+41243143 Msa0851160:intron
TAAGCGGTAGACATGGTCAA+AGG 0.655113 5_4:-41244509 None:intergenic
AACTTCCTTGAGCCACCAAG+AGG 0.658392 5_4:+41243747 Msa0851160:CDS
GGTGATGATGGACCTGTCGG+TGG 0.659135 5_4:-41245018 None:intergenic
TAGAAGTTGTTGCATCTGTG+AGG 0.659849 5_4:-41247265 None:intergenic
TAAAGACGCTCCTAATCACA+AGG 0.660476 5_4:+41247356 Msa0851160:CDS
TGGAAGGTTATCTGATGACG+AGG 0.662168 5_4:+41241330 Msa0851160:CDS
ATTGGCAAGATGAAGGTGCA+AGG 0.662707 5_4:+41242172 Msa0851160:CDS
TGACATGTATGAGCGGCTGA+AGG 0.662731 5_4:+41245505 Msa0851160:CDS
ACCTTGCATGAAATGTTGGA+AGG 0.664073 5_4:-41241748 None:intergenic
CGGTGGACAAGATATGAGGA+AGG 0.664141 5_4:-41245001 None:intergenic
AAGGCAATCTGCTGTTGGTG+TGG 0.664226 5_4:-41243674 None:intergenic
ACATGCTACATCCAGTAGGA+GGG 0.666417 5_4:-41242303 None:intergenic
CAGTACGCAAAGTCAAAGTG+GGG 0.672704 5_4:+41242275 Msa0851160:intron
TGGGCGTGTTCTTGTCCAAG+TGG 0.675367 5_4:+41243009 Msa0851160:CDS
CCAAGGTATATTCTGGCCAG+CGG 0.676002 5_4:-41245559 None:intergenic
ATTAGTGGAATGAAAAGTGG+CGG 0.676114 5_4:+41240455 Msa0851160:CDS
AACAGTCTGACAAAGTACGC+TGG 0.679236 5_4:+41243140 Msa0851160:intron
TGGAAGACAAGGAATGACGA+GGG 0.680604 5_4:+41240778 Msa0851160:CDS
GTGAATCAGAAACCGTAATG+GGG 0.680830 5_4:-41239880 None:intergenic
GTTGCAGTGTGGTTCTGTAG+CGG 0.681208 5_4:+41243368 Msa0851160:intron
TATGCAATTACTGCATACCA+TGG 0.685741 5_4:-41241869 None:intergenic
GCAGGGCTTATATGTCAGCA+GGG 0.687674 5_4:+41240933 Msa0851160:CDS
GCGGTTGAGACATTCGATAG+CGG 0.689985 5_4:+41240554 Msa0851160:CDS
CCACCATCAAAATTTAGGAG+TGG 0.694173 5_4:+41240500 Msa0851160:CDS
CAAGACAACAGAGTCCCCAA+TGG 0.694596 5_4:+41240656 Msa0851160:CDS
ATGGTATAAAGGTTCAAGGG+TGG 0.698357 5_4:+41246987 Msa0851160:CDS
TTGTTGATGACATGTATGAG+CGG 0.713232 5_4:+41245498 Msa0851160:CDS
TGAAATGTTGGAAGGCGAGG+TGG 0.713600 5_4:-41241740 None:intergenic
TGAGTAGAACCACAAAATGG+GGG 0.718280 5_4:-41241373 None:intergenic
TCACTCGCATACCGAGACCG+TGG 0.723475 5_4:-41240713 None:intergenic
GGCACCTAGATGCATCATGG+AGG 0.732994 5_4:+41247317 Msa0851160:CDS
TAATAAGTTACCTGTCTCGG+CGG 0.736229 5_4:+41240535 Msa0851160:CDS
AGAGATAAGACAAACTAACG+AGG 0.762301 5_4:+41241396 Msa0851160:CDS
GATACAAGAGAAAGACATGG+AGG 0.786579 5_4:+41247296 Msa0851160:CDS
AAGGCAGAATGGTTTCACTG+AGG 0.797068 5_4:+41240829 Msa0851160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTATGAAAAATTATT+GGG - chr5_4:41241021-41241040 None:intergenic 10.0%
!!! AATTTTGTATGAAAAATTAT+TGG - chr5_4:41241022-41241041 None:intergenic 10.0%
!! TATTATTACAATTTACTAAT+TGG + chr5_4:41244362-41244381 Msa0851160:intron 10.0%
!! GATTATATAAATACTTAAAT+TGG - chr5_4:41244773-41244792 None:intergenic 10.0%
!!! ATACAAAATTTTCTCAATTT+TGG + chr5_4:41241032-41241051 Msa0851160:intron 15.0%
!! AAACTTATACAATTGAAAAA+TGG - chr5_4:41242712-41242731 None:intergenic 15.0%
!! ATAAAATAACTTACAACATA+TGG - chr5_4:41242860-41242879 None:intergenic 15.0%
!! AAATGCAATAAAAATATTAC+CGG - chr5_4:41243052-41243071 None:intergenic 15.0%
!! AGACAATAAAATGATATATT+AGG - chr5_4:41243343-41243362 None:intergenic 15.0%
!! TAATAAATTAATATTTCAGC+AGG - chr5_4:41243567-41243586 None:intergenic 15.0%
!!! CTTTAAAAATATAATGAAAG+TGG - chr5_4:41243827-41243846 None:intergenic 15.0%
!!! ATTTTTTGTCTTATCTAATA+CGG + chr5_4:41244062-41244081 Msa0851160:intron 15.0%
!!! ACTCTTTTTCTATATTATAA+TGG + chr5_4:41245328-41245347 Msa0851160:intron 15.0%
!!! CTCTTTTTCTATATTATAAT+GGG + chr5_4:41245329-41245348 Msa0851160:intron 15.0%
!!! AAAAAAAAAAGATCTTCTTT+TGG + chr5_4:41245954-41245973 Msa0851160:intron 15.0%
!!! AATATATAGTTTTACTAGAT+TGG + chr5_4:41247619-41247638 Msa0851160:three_prime_UTR 15.0%
!!! TAATTTATTCTTCATTTTGA+TGG + chr5_4:41247680-41247699 Msa0851160:three_prime_UTR 15.0%
!! TTGCATAAAACATGAAAAAA+CGG - chr5_4:41240162-41240181 None:intergenic 20.0%
!!! TTTTTCATGTTTTATGCAAA+TGG + chr5_4:41240163-41240182 Msa0851160:intron 20.0%
!!! TTTTCATGTTTTATGCAAAT+GGG + chr5_4:41240164-41240183 Msa0851160:intron 20.0%
!!! ATATACCAATGTAGTTATTT+TGG - chr5_4:41240336-41240355 None:intergenic 20.0%
!! TATATTAGCATATATGCTTA+AGG - chr5_4:41241819-41241838 None:intergenic 20.0%
!! AGTGACACATAAAATTAAAA+TGG + chr5_4:41242333-41242352 Msa0851160:CDS 20.0%
!!! ATATCATTTTATTGTCTTTG+TGG + chr5_4:41243346-41243365 Msa0851160:intron 20.0%
!! TAAAAATCGTATGTTGTATA+TGG - chr5_4:41244011-41244030 None:intergenic 20.0%
!! TTAACAACTAATATTATCTC+AGG + chr5_4:41244403-41244422 Msa0851160:intron 20.0%
!! ATAATCAAAATATACTTCCT+AGG + chr5_4:41244594-41244613 Msa0851160:CDS 20.0%
!!! TTTCTTTTCTCAAACATATA+AGG + chr5_4:41244621-41244640 Msa0851160:intron 20.0%
!!! TATTGTTAATGGTTCTAATA+TGG + chr5_4:41244891-41244910 Msa0851160:intron 20.0%
!! ATTCTTCGATTACATAATTA+GGG - chr5_4:41245150-41245169 None:intergenic 20.0%
!! AATTCTTCGATTACATAATT+AGG - chr5_4:41245151-41245170 None:intergenic 20.0%
!!! TATTATAATGGGTTTTTTGA+AGG + chr5_4:41245340-41245359 Msa0851160:intron 20.0%
!! GATAGTAAGAAAATAGAATT+TGG - chr5_4:41245656-41245675 None:intergenic 20.0%
!! AATTTAATATTTGATACCCT+TGG + chr5_4:41246254-41246273 Msa0851160:intron 20.0%
!!! TTTAGATGTAATGAGTTTTA+TGG + chr5_4:41246892-41246911 Msa0851160:intron 20.0%
!!! TTATACATTTCTTATTTGAC+AGG + chr5_4:41246924-41246943 Msa0851160:intron 20.0%
!! AATACACATGTAAATAAAGA+GGG + chr5_4:41247409-41247428 Msa0851160:three_prime_UTR 20.0%
!! TAAATAAAGAGGGTTATTAA+GGG + chr5_4:41247419-41247438 Msa0851160:three_prime_UTR 20.0%
!! ATGATAATCAATCAATCATA+TGG + chr5_4:41247451-41247470 Msa0851160:three_prime_UTR 20.0%
!! TGATAATCAATCAATCATAT+GGG + chr5_4:41247452-41247471 Msa0851160:three_prime_UTR 20.0%
!! TGTTATTCATTGTAATACTT+TGG + chr5_4:41247592-41247611 Msa0851160:three_prime_UTR 20.0%
! TCTCTAAGCTTAATATCAAA+GGG + chr5_4:41239802-41239821 Msa0851160:five_prime_UTR 25.0%
! ATTTGAGAGAGAGAAAAAAA+GGG - chr5_4:41239854-41239873 None:intergenic 25.0%
!!! AATGAAATTTTGAGGGTTTT+TGG - chr5_4:41239938-41239957 None:intergenic 25.0%
!! AAACGTGAATGAAATTTTGA+GGG - chr5_4:41239945-41239964 None:intergenic 25.0%
!! TAAACGTGAATGAAATTTTG+AGG - chr5_4:41239946-41239965 None:intergenic 25.0%
! TGCATAAAGCTTAATTCTTT+AGG + chr5_4:41240010-41240029 Msa0851160:five_prime_UTR 25.0%
!! AGCTTAATTCTTTAGGTTTA+AGG + chr5_4:41240017-41240036 Msa0851160:five_prime_UTR 25.0%
!! TAGGTTTAAGGTTTCAAAAT+TGG + chr5_4:41240029-41240048 Msa0851160:five_prime_UTR 25.0%
! TCGCAACTTTACAAATAATA+AGG - chr5_4:41240204-41240223 None:intergenic 25.0%
! GTGTTTGATTGTTAATTAGA+AGG + chr5_4:41240391-41240410 Msa0851160:intron 25.0%
! TATTTGAATGTAACTACATG+TGG - chr5_4:41241173-41241192 None:intergenic 25.0%
! TGCATGTTTATGTATAAAGA+AGG - chr5_4:41241589-41241608 None:intergenic 25.0%
!! CATTCATTTTCCAAAAACAT+TGG - chr5_4:41241950-41241969 None:intergenic 25.0%
! TAAATTACATGAACACTTGA+AGG - chr5_4:41242038-41242057 None:intergenic 25.0%
!!! CCAATAAGTTTTTTCAGTTT+AGG - chr5_4:41242157-41242176 None:intergenic 25.0%
! CCTAAACTGAAAAAACTTAT+TGG + chr5_4:41242154-41242173 Msa0851160:CDS 25.0%
!! TTTTTATTATCCATGCCTTA+AGG + chr5_4:41242619-41242638 Msa0851160:intron 25.0%
!! TTTTATTATCCATGCCTTAA+GGG + chr5_4:41242620-41242639 Msa0851160:intron 25.0%
! AATATAATTCACCATTATGC+TGG + chr5_4:41242893-41242912 Msa0851160:intron 25.0%
! AATATATTCAACCAGCATAA+TGG - chr5_4:41242907-41242926 None:intergenic 25.0%
! ATGTATTATGCATTTGCTTT+AGG + chr5_4:41243288-41243307 Msa0851160:intron 25.0%
! GCAAATTATATACCAAGTTA+AGG - chr5_4:41243696-41243715 None:intergenic 25.0%
! GGATTAACAGTTTAATTAAG+TGG - chr5_4:41243980-41243999 None:intergenic 25.0%
!!! TACAACATACGATTTTTAGT+TGG + chr5_4:41244013-41244032 Msa0851160:intron 25.0%
! TTATCTAATACGGTTCAATT+CGG + chr5_4:41244072-41244091 Msa0851160:intron 25.0%
! GCAGTTCATAATTAAGAATT+CGG + chr5_4:41244653-41244672 Msa0851160:intron 25.0%
! AAGTAAGAACATGTGATAAT+AGG + chr5_4:41244799-41244818 Msa0851160:intron 25.0%
! ACTTTCACATGTAACAAATA+AGG - chr5_4:41244842-41244861 None:intergenic 25.0%
! CAAGCTACTATTATTGTTAA+TGG + chr5_4:41244880-41244899 Msa0851160:intron 25.0%
!! TGAAAGATCTCTTTGAAAAT+CGG - chr5_4:41245070-41245089 None:intergenic 25.0%
!!! ACTAATTTTAGTATGTGACT+AGG + chr5_4:41245117-41245136 Msa0851160:intron 25.0%
! TCCATTTGTATATTCTTGTT+TGG + chr5_4:41245255-41245274 Msa0851160:CDS 25.0%
! TCCAAACAAGAATATACAAA+TGG - chr5_4:41245259-41245278 None:intergenic 25.0%
!! CTTTTAAACTAATCATGTGT+TGG + chr5_4:41245366-41245385 Msa0851160:intron 25.0%
! TACAAGACAATATATCACTT+AGG - chr5_4:41245401-41245420 None:intergenic 25.0%
! TTGAAATACAAGTTTAACTC+TGG + chr5_4:41245715-41245734 Msa0851160:intron 25.0%
! CTGAAAAAATAAATGATGAC+AGG + chr5_4:41245749-41245768 Msa0851160:intron 25.0%
! TATTTAAGCCCAAATTTCTT+AGG - chr5_4:41245861-41245880 None:intergenic 25.0%
! CTTACAATAACCTTTACATT+GGG - chr5_4:41246421-41246440 None:intergenic 25.0%
! CAATGTAAAGGTTATTGTAA+GGG + chr5_4:41246420-41246439 Msa0851160:intron 25.0%
! GCTACTAATGCTATTAAATT+TGG + chr5_4:41246485-41246504 Msa0851160:intron 25.0%
! GATTAATTTACTAACTATGC+TGG - chr5_4:41246583-41246602 None:intergenic 25.0%
! ACATCTAAAAAGATACTACA+TGG - chr5_4:41246881-41246900 None:intergenic 25.0%
! TTTATTATGTGTGCAATACA+AGG + chr5_4:41247054-41247073 Msa0851160:intron 25.0%
! CAATACACATGTAAATAAAG+AGG + chr5_4:41247408-41247427 Msa0851160:three_prime_UTR 25.0%
! GTAAATAAAGAGGGTTATTA+AGG + chr5_4:41247418-41247437 Msa0851160:three_prime_UTR 25.0%
! AAATAAAGAGGGTTATTAAG+GGG + chr5_4:41247420-41247439 Msa0851160:three_prime_UTR 25.0%
! ATTCATTGTAATACTTTGGT+AGG + chr5_4:41247596-41247615 Msa0851160:three_prime_UTR 25.0%
!!! GTGTTTTTTTTTTCTGTGTG+TGG + chr5_4:41239758-41239777 Msa0851160:five_prime_UTR 30.0%
CTCTCTAAGCTTAATATCAA+AGG + chr5_4:41239801-41239820 Msa0851160:five_prime_UTR 30.0%
GTTTACTTGCTTAATCAGAA+AGG - chr5_4:41239832-41239851 None:intergenic 30.0%
GATTTGAGAGAGAGAAAAAA+AGG - chr5_4:41239855-41239874 None:intergenic 30.0%
TTCTGCCAAAATAACTACAT+TGG + chr5_4:41240328-41240347 Msa0851160:intron 30.0%
! AATTTTCTACCACACAAGTA+GGG + chr5_4:41240882-41240901 Msa0851160:CDS 30.0%
TCACTTTCACACATTGTTAT+TGG + chr5_4:41241195-41241214 Msa0851160:intron 30.0%
ATAGCACAAATCACAAAGTT+AGG - chr5_4:41241296-41241315 None:intergenic 30.0%
! GTACTTGATTCTGCTTTATT+TGG - chr5_4:41241451-41241470 None:intergenic 30.0%
!! TACTTTGAAATCTGTATCCA+GGG + chr5_4:41241468-41241487 Msa0851160:CDS 30.0%
GTTAAGAACTCAATATTGAG+AGG - chr5_4:41241567-41241586 None:intergenic 30.0%
TCTTTACTTAGAGATGCATT+TGG + chr5_4:41241971-41241990 Msa0851160:CDS 30.0%
CTTTACTTAGAGATGCATTT+GGG + chr5_4:41241972-41241991 Msa0851160:CDS 30.0%
AAAACTTATTGGCAAGATGA+AGG + chr5_4:41242165-41242184 Msa0851160:CDS 30.0%
! AAGTTGTTACACCAACTTTT+AGG - chr5_4:41242528-41242547 None:intergenic 30.0%
TTTATTATCCATGCCTTAAG+GGG + chr5_4:41242621-41242640 Msa0851160:intron 30.0%
ATTGAAGTTCAAGATTCCAA+GGG + chr5_4:41242977-41242996 Msa0851160:CDS 30.0%
AGATGACAATAGTCATCTTA+AGG + chr5_4:41243237-41243256 Msa0851160:CDS 30.0%
! ACAGAGTTTGCTTCATATTA+TGG + chr5_4:41243489-41243508 Msa0851160:CDS 30.0%
TAGATATCTATCGTATGTCA+TGG + chr5_4:41243645-41243664 Msa0851160:intron 30.0%
TTAAACTGTTAATCCAAGCA+TGG + chr5_4:41243985-41244004 Msa0851160:intron 30.0%
! ACTAATATTATCTCAGGTTG+CGG + chr5_4:41244409-41244428 Msa0851160:intron 30.0%
TATATTCATCTGTGTCAGAA+AGG - chr5_4:41244457-41244476 None:intergenic 30.0%
GAATAATGAAAGCTGTTTGA+TGG + chr5_4:41244484-41244503 Msa0851160:CDS 30.0%
ATTCCTAAGATTTATGCACA+GGG - chr5_4:41244549-41244568 None:intergenic 30.0%
TTGAGAAAAGAAAGATACCT+AGG - chr5_4:41244614-41244633 None:intergenic 30.0%
TATATGGAAGCAGAAAGATT+TGG - chr5_4:41244952-41244971 None:intergenic 30.0%
! GATTTTCAAAGAGATCTTTC+AGG + chr5_4:41245069-41245088 Msa0851160:CDS 30.0%
!!! TCTAAATGCTTTGCTTTTTC+AGG + chr5_4:41245433-41245452 Msa0851160:intron 30.0%
TCATACATGTCATCAACAAA+GGG - chr5_4:41245497-41245516 None:intergenic 30.0%
!!! ACATACATTTTCTAGAACCA+AGG - chr5_4:41245579-41245598 None:intergenic 30.0%
AAAAAGAAAAATGCAGGATG+AGG - chr5_4:41245613-41245632 None:intergenic 30.0%
AATGGGAAAAAGAAAAATGC+AGG - chr5_4:41245619-41245638 None:intergenic 30.0%
! TGGCAACATCTAAAACAAAT+GGG - chr5_4:41245636-41245655 None:intergenic 30.0%
! TTGGCAACATCTAAAACAAA+TGG - chr5_4:41245637-41245656 None:intergenic 30.0%
!! AGCTTTAGATAAACAGTATG+CGG + chr5_4:41245803-41245822 Msa0851160:CDS 30.0%
! TTCTTTTGAATTCCTTGAAG+AGG + chr5_4:41246030-41246049 Msa0851160:CDS 30.0%
TTGAATCACAGTTCAAATCA+TGG + chr5_4:41246078-41246097 Msa0851160:CDS 30.0%
TGAATCACAGTTCAAATCAT+GGG + chr5_4:41246079-41246098 Msa0851160:CDS 30.0%
!! TATTCTGAAACCCAATGTAA+AGG + chr5_4:41246408-41246427 Msa0851160:intron 30.0%
CCTTACAATAACCTTTACAT+TGG - chr5_4:41246422-41246441 None:intergenic 30.0%
CCAATGTAAAGGTTATTGTA+AGG + chr5_4:41246419-41246438 Msa0851160:intron 30.0%
TAATAGCATTAGTAGCAATG+TGG - chr5_4:41246481-41246500 None:intergenic 30.0%
GAAGATTCTTCAAGATTCAA+AGG + chr5_4:41246678-41246697 Msa0851160:CDS 30.0%
AATACTGTGAAGATAGCTTA+TGG - chr5_4:41246767-41246786 None:intergenic 30.0%
! CAGGTAACTTAATTTTCTTC+TGG + chr5_4:41246841-41246860 Msa0851160:intron 30.0%
TAAAAAGATACTACATGGCA+AGG - chr5_4:41246876-41246895 None:intergenic 30.0%
!!! ACAGGAAATTTTGAGTTTCT+TGG + chr5_4:41246942-41246961 Msa0851160:intron 30.0%
ACAGAAAAGAGAATAGATCA+TGG + chr5_4:41246968-41246987 Msa0851160:CDS 30.0%
GAGAATAGATCATGGTATAA+AGG + chr5_4:41246976-41246995 Msa0851160:CDS 30.0%
ATCATGGTATAAAGGTTCAA+GGG + chr5_4:41246984-41247003 Msa0851160:CDS 30.0%
AACGTCTGCTTAATTACTTA+AGG + chr5_4:41247027-41247046 Msa0851160:intron 30.0%
AGCATATTAATCTTGTTCCT+AGG - chr5_4:41247518-41247537 None:intergenic 30.0%
TTAATATGCTCTTCACTTAC+TGG + chr5_4:41247528-41247547 Msa0851160:three_prime_UTR 30.0%
TAATATGCTCTTCACTTACT+GGG + chr5_4:41247529-41247548 Msa0851160:three_prime_UTR 30.0%
TGTGAATCAGAAACCGTAAT+GGG - chr5_4:41239884-41239903 None:intergenic 35.0%
!! ATTCAGAGGTTGGTTCTATT+AGG + chr5_4:41240064-41240083 Msa0851160:five_prime_UTR 35.0%
TTAGGTAAGATGTTCACTGA+AGG + chr5_4:41240082-41240101 Msa0851160:exon 35.0%
TTGACAAAAACGCACTTAGA+TGG + chr5_4:41240107-41240126 Msa0851160:CDS 35.0%
TGACAAAAACGCACTTAGAT+GGG + chr5_4:41240108-41240127 Msa0851160:CDS 35.0%
!! CCACTTTTCATTCCACTAAT+CGG - chr5_4:41240455-41240474 None:intergenic 35.0%
ATTAGTGGAATGAAAAGTGG+CGG + chr5_4:41240455-41240474 Msa0851160:CDS 35.0%
TACCACCACCATCAAAATTT+AGG + chr5_4:41240495-41240514 Msa0851160:CDS 35.0%
! TGACCACTCCTAAATTTTGA+TGG - chr5_4:41240506-41240525 None:intergenic 35.0%
TGCTAATAAGTTACCTGTCT+CGG + chr5_4:41240532-41240551 Msa0851160:CDS 35.0%
TAGCGGTTCAAATAGTGATA+TGG + chr5_4:41240571-41240590 Msa0851160:CDS 35.0%
!! TTATGGTGGAAGGTATTCTT+TGG + chr5_4:41240622-41240641 Msa0851160:CDS 35.0%
! GAATTTTCTACCACACAAGT+AGG + chr5_4:41240881-41240900 Msa0851160:CDS 35.0%
CTTTGAACATTCATCCTTGA+AGG - chr5_4:41240974-41240993 None:intergenic 35.0%
TGTTCAAAGTTCTGCAGAAA+AGG + chr5_4:41240985-41241004 Msa0851160:CDS 35.0%
GAATGAAATACTACGTAGCA+CGG + chr5_4:41241091-41241110 Msa0851160:intron 35.0%
GATATTTCACCTATGAAGCA+CGG - chr5_4:41241259-41241278 None:intergenic 35.0%
GCTTCATAGGTGAAATATCT+TGG + chr5_4:41241260-41241279 Msa0851160:intron 35.0%
! TGCTATGAGAATTTTCAGAG+TGG + chr5_4:41241310-41241329 Msa0851160:intron 35.0%
! ATGAGAATTTTCAGAGTGGA+AGG + chr5_4:41241314-41241333 Msa0851160:intron 35.0%
TTGAGTAGAACCACAAAATG+GGG - chr5_4:41241377-41241396 None:intergenic 35.0%
CTTGAGTAGAACCACAAAAT+GGG - chr5_4:41241378-41241397 None:intergenic 35.0%
TCTTGAGTAGAACCACAAAA+TGG - chr5_4:41241379-41241398 None:intergenic 35.0%
AGAGATAAGACAAACTAACG+AGG + chr5_4:41241396-41241415 Msa0851160:CDS 35.0%
!! GTACTTTGAAATCTGTATCC+AGG + chr5_4:41241467-41241486 Msa0851160:CDS 35.0%
TGATACCTTGCATGAAATGT+TGG - chr5_4:41241755-41241774 None:intergenic 35.0%
! TGAATTCTTTTCAGTGCTCT+TGG + chr5_4:41241845-41241864 Msa0851160:intron 35.0%
! GAATTCTTTTCAGTGCTCTT+GGG + chr5_4:41241846-41241865 Msa0851160:intron 35.0%
TATGCAATTACTGCATACCA+TGG - chr5_4:41241872-41241891 None:intergenic 35.0%
! TATGGAAGCTCCAATGTTTT+TGG + chr5_4:41241937-41241956 Msa0851160:CDS 35.0%
! AATGGAGAACTTTCTAGTGA+GGG + chr5_4:41242124-41242143 Msa0851160:CDS 35.0%
ATGTCACAAAAGACTCACTA+TGG - chr5_4:41242243-41242262 None:intergenic 35.0%
TTGACTGCAAATTTGAGAAG+TGG - chr5_4:41242372-41242391 None:intergenic 35.0%
TTGCAGTCAAAACTATCTTC+TGG + chr5_4:41242382-41242401 Msa0851160:CDS 35.0%
AGTCAAAACTATCTTCTGGT+TGG + chr5_4:41242386-41242405 Msa0851160:CDS 35.0%
!! AAGTTGGTGTAACAACTTTG+CGG + chr5_4:41242530-41242549 Msa0851160:CDS 35.0%
! TTCCAACATTTTTCCCCTTA+AGG - chr5_4:41242637-41242656 None:intergenic 35.0%
ATGTCTCTGATGATATACAC+AGG - chr5_4:41242764-41242783 None:intergenic 35.0%
TTACAACATATGGACTTCAC+TGG - chr5_4:41242850-41242869 None:intergenic 35.0%
! TACAGTTTTCCAGATAGTCT+TGG + chr5_4:41242941-41242960 Msa0851160:intron 35.0%
AAATCATCTCCAAGACTATC+TGG - chr5_4:41242953-41242972 None:intergenic 35.0%
CATTGAAGTTCAAGATTCCA+AGG + chr5_4:41242976-41242995 Msa0851160:CDS 35.0%
!!! ATTCCAAGGGAAAGCATTTT+GGG + chr5_4:41242990-41243009 Msa0851160:CDS 35.0%
AGAAGTTGCAATGAAAGTTC+AGG + chr5_4:41243416-41243435 Msa0851160:CDS 35.0%
GAAGTTGCAATGAAAGTTCA+GGG + chr5_4:41243417-41243436 Msa0851160:CDS 35.0%
CAAAGGAACCTAGAATTACA+TGG + chr5_4:41243447-41243466 Msa0851160:CDS 35.0%
AATTACATGGTCCATGGAAA+TGG + chr5_4:41243460-41243479 Msa0851160:CDS 35.0%
CTATTTCCCTTCATGATAAC+AGG - chr5_4:41243724-41243743 None:intergenic 35.0%
TCTTATCAGAATCGACTACT+AGG + chr5_4:41244098-41244117 Msa0851160:intron 35.0%
TATCTGTTCAATTTCGTCCT+TGG - chr5_4:41244129-41244148 None:intergenic 35.0%
AGCTTGTAAAGTTTAACAGC+CGG - chr5_4:41244257-41244276 None:intergenic 35.0%
TCATGATATCTTATCTCCTG+AGG + chr5_4:41244280-41244299 Msa0851160:CDS 35.0%
AAACCCTGTGCATAAATCTT+AGG + chr5_4:41244543-41244562 Msa0851160:CDS 35.0%
CATTCCTAAGATTTATGCAC+AGG - chr5_4:41244550-41244569 None:intergenic 35.0%
!! GTTAATGGTTCTAATATGGC+TGG + chr5_4:41244895-41244914 Msa0851160:intron 35.0%
TTCCTTCTTAGTCCTATCAA+AGG + chr5_4:41245209-41245228 Msa0851160:intron 35.0%
GCAAAGATAGACGTTTATCT+TGG - chr5_4:41245283-41245302 None:intergenic 35.0%
!!! CTTTGCTTTTTCAGGTGAAA+TGG + chr5_4:41245441-41245460 Msa0851160:intron 35.0%
CTCATACATGTCATCAACAA+AGG - chr5_4:41245498-41245517 None:intergenic 35.0%
!! TTGTTGATGACATGTATGAG+CGG + chr5_4:41245498-41245517 Msa0851160:CDS 35.0%
! TCTAGAACCAAGGTATATTC+TGG - chr5_4:41245569-41245588 None:intergenic 35.0%
! AACTTATGTCACCTTTTGTC+AGG + chr5_4:41246001-41246020 Msa0851160:intron 35.0%
AAGAATTCCAACCTGACAAA+AGG - chr5_4:41246015-41246034 None:intergenic 35.0%
TTGAACTGTGATTCAATCCT+TGG - chr5_4:41246074-41246093 None:intergenic 35.0%
TTTGACAACATTGATGTGCT+TGG - chr5_4:41246293-41246312 None:intergenic 35.0%
GACGAACATAGTAACTTAAC+AGG - chr5_4:41246514-41246533 None:intergenic 35.0%
TAGCATTCTGTAACTTTGTC+TGG - chr5_4:41246648-41246667 None:intergenic 35.0%
TCAAGATTCAAAGGAAACAG+TGG + chr5_4:41246687-41246706 Msa0851160:CDS 35.0%
ATTAAGTTACCTGTCCCATT+CGG - chr5_4:41246834-41246853 None:intergenic 35.0%
GATCATGGTATAAAGGTTCA+AGG + chr5_4:41246983-41247002 Msa0851160:CDS 35.0%
! TTTTCTTACAGCCCATAATC+CGG - chr5_4:41247185-41247204 None:intergenic 35.0%
AAACTGTTGTCCTTGTGATT+AGG - chr5_4:41247369-41247388 None:intergenic 35.0%
TCAAATCTCGAACCCCATTA+CGG + chr5_4:41239868-41239887 Msa0851160:five_prime_UTR 40.0%
GTGAATCAGAAACCGTAATG+GGG - chr5_4:41239883-41239902 None:intergenic 40.0%
GTGTGAATCAGAAACCGTAA+TGG - chr5_4:41239885-41239904 None:intergenic 40.0%
GTTTCTGATTCACACTTCTG+TGG + chr5_4:41239890-41239909 Msa0851160:five_prime_UTR 40.0%
! GGTAGTGCATTTTCATTCAG+AGG + chr5_4:41240050-41240069 Msa0851160:five_prime_UTR 40.0%
! GTGCATTTTCATTCAGAGGT+TGG + chr5_4:41240054-41240073 Msa0851160:five_prime_UTR 40.0%
CTCATTGCTGTGTTTGAGAA+TGG - chr5_4:41240422-41240441 None:intergenic 40.0%
CCGATTAGTGGAATGAAAAG+TGG + chr5_4:41240452-41240471 Msa0851160:CDS 40.0%
!!! CTCCTAAATTTTGATGGTGG+TGG - chr5_4:41240500-41240519 None:intergenic 40.0%
!! CCACTCCTAAATTTTGATGG+TGG - chr5_4:41240503-41240522 None:intergenic 40.0%
CCACCATCAAAATTTAGGAG+TGG + chr5_4:41240500-41240519 Msa0851160:CDS 40.0%
GAGACAGGTAACTTATTAGC+AGG - chr5_4:41240533-41240552 None:intergenic 40.0%
TAATAAGTTACCTGTCTCGG+CGG + chr5_4:41240535-41240554 Msa0851160:CDS 40.0%
GATTCGGAAGAGGAAGTTTA+TGG + chr5_4:41240605-41240624 Msa0851160:CDS 40.0%
! AAGAGGAAGTTTATGGTGGA+AGG + chr5_4:41240612-41240631 Msa0851160:CDS 40.0%
TATCTCTTAGCAGCACCATT+GGG - chr5_4:41240674-41240693 None:intergenic 40.0%
ATATCTCTTAGCAGCACCAT+TGG - chr5_4:41240675-41240694 None:intergenic 40.0%
!! AATGGTGCTGCTAAGAGATA+TGG + chr5_4:41240674-41240693 Msa0851160:CDS 40.0%
!! ATGGTGCTGCTAAGAGATAT+GGG + chr5_4:41240675-41240694 Msa0851160:CDS 40.0%
TCTTCCAGTAAGTGTTTCTC+TGG - chr5_4:41240765-41240784 None:intergenic 40.0%
GAAACACTTACTGGAAGACA+AGG + chr5_4:41240767-41240786 Msa0851160:CDS 40.0%
TTTCACTGAGGATGATTCGT+CGG + chr5_4:41240841-41240860 Msa0851160:CDS 40.0%
CAAGTAGGGAGTAGTATCAA+TGG + chr5_4:41240896-41240915 Msa0851160:CDS 40.0%
!! GACATATAAGCCCTGCTTTT+TGG - chr5_4:41240929-41240948 None:intergenic 40.0%
ATGCTTCTAGTGTACCTTCA+AGG + chr5_4:41240957-41240976 Msa0851160:CDS 40.0%
! TTGCTAGCTACTGCTTCTTT+TGG + chr5_4:41241066-41241085 Msa0851160:intron 40.0%
! TGCTAGCTACTGCTTCTTTT+GGG + chr5_4:41241067-41241086 Msa0851160:intron 40.0%
TGAGTAGAACCACAAAATGG+GGG - chr5_4:41241376-41241395 None:intergenic 40.0%
ATGGTTCTCTAACTTATCCC+TGG - chr5_4:41241488-41241507 None:intergenic 40.0%
AGGGATAAGTTAGAGAACCA+TGG + chr5_4:41241487-41241506 Msa0851160:CDS 40.0%
CAAGCTCGGAAAAATTCGTT+AGG + chr5_4:41241515-41241534 Msa0851160:CDS 40.0%
ACCTTGCATGAAATGTTGGA+AGG - chr5_4:41241751-41241770 None:intergenic 40.0%
GAGCTAATGGTGAAATGCAA+TGG + chr5_4:41242106-41242125 Msa0851160:CDS 40.0%
! CAATGGAGAACTTTCTAGTG+AGG + chr5_4:41242123-41242142 Msa0851160:CDS 40.0%
TTCCCTGACACATAAAAGCT+TGG + chr5_4:41242456-41242475 Msa0851160:CDS 40.0%
! TGCCAAGCTTTTATGTGTCA+GGG - chr5_4:41242461-41242480 None:intergenic 40.0%
! ATGCCAAGCTTTTATGTGTC+AGG - chr5_4:41242462-41242481 None:intergenic 40.0%
CGCTATATACAACAAGTCTC+TGG + chr5_4:41242499-41242518 Msa0851160:CDS 40.0%
TATGAAGCTGTGCAAGGTAT+GGG + chr5_4:41242568-41242587 Msa0851160:intron 40.0%
! ACATTTTTCCCCTTAAGGCA+TGG - chr5_4:41242632-41242651 None:intergenic 40.0%
TGCCTTAAGGGGAAAAATGT+TGG + chr5_4:41242632-41242651 Msa0851160:intron 40.0%
TAGTTGAAGAAGACGCCATT+AGG + chr5_4:41242811-41242830 Msa0851160:CDS 40.0%
!!! GATTCCAAGGGAAAGCATTT+TGG + chr5_4:41242989-41243008 Msa0851160:CDS 40.0%
!! TTTTTAGTGCCTGTGTTGAG+AGG + chr5_4:41243083-41243102 Msa0851160:intron 40.0%
TAATGATCACCTCTCAACAC+AGG - chr5_4:41243095-41243114 None:intergenic 40.0%
ATGACTATTGTCATCTGCAC+TGG - chr5_4:41243233-41243252 None:intergenic 40.0%
!! TCATTGCAACTTCTAGAACC+AGG - chr5_4:41243410-41243429 None:intergenic 40.0%
ACCTAGAATTACATGGTCCA+TGG + chr5_4:41243454-41243473 Msa0851160:CDS 40.0%
TCCATGGACCATGTAATTCT+AGG - chr5_4:41243458-41243477 None:intergenic 40.0%
CTGAGATTTATACGAAGCTG+AGG + chr5_4:41243517-41243536 Msa0851160:CDS 40.0%
AAGTTAAGGCAATCTGCTGT+TGG - chr5_4:41243682-41243701 None:intergenic 40.0%
AACAGCAGATTGCCTTAACT+TGG + chr5_4:41243681-41243700 Msa0851160:CDS 40.0%
CTTGCACCTGTTATCATGAA+GGG + chr5_4:41243715-41243734 Msa0851160:CDS 40.0%
ATGTTGTATATGGCCATGCT+TGG - chr5_4:41244001-41244020 None:intergenic 40.0%
CTTGATGAGTCATCTTTCTC+TGG + chr5_4:41244179-41244198 Msa0851160:CDS 40.0%
! GTAGTGACAGAAACTGGTTT+GGG - chr5_4:41244306-41244325 None:intergenic 40.0%
AGTAGTGACAGAAACTGGTT+TGG - chr5_4:41244307-41244326 None:intergenic 40.0%
! GGTTTTCATCTTCTGGTAAG+CGG - chr5_4:41244528-41244547 None:intergenic 40.0%
TTCAAAGAGATCTTTCAGGC+TGG + chr5_4:41245073-41245092 Msa0851160:CDS 40.0%
CACCTTTGATAGGACTAAGA+AGG - chr5_4:41245214-41245233 None:intergenic 40.0%
CTTCTTAGTCCTATCAAAGG+TGG + chr5_4:41245212-41245231 Msa0851160:intron 40.0%
!!! CTTTTTCAGGTGAAATGGTC+TGG + chr5_4:41245446-41245465 Msa0851160:intron 40.0%
GGAAACATTGACAGACTATG+AGG + chr5_4:41245526-41245545 Msa0851160:CDS 40.0%
GGCAATAGCTGATATTGAGA+AGG + chr5_4:41245770-41245789 Msa0851160:intron 40.0%
TGATATTGAGAAGGCGATTG+TGG + chr5_4:41245779-41245798 Msa0851160:CDS 40.0%
AGCTCCTCTTAAAGATAGCA+TGG + chr5_4:41245833-41245852 Msa0851160:CDS 40.0%
AGCATGGCACCTAAGAAATT+TGG + chr5_4:41245849-41245868 Msa0851160:CDS 40.0%
GCATGGCACCTAAGAAATTT+GGG + chr5_4:41245850-41245869 Msa0851160:CDS 40.0%
ATGTCCAGAAACTTGCCAAA+CGG + chr5_4:41245880-41245899 Msa0851160:CDS 40.0%
! TATGTCACCTTTTGTCAGGT+TGG + chr5_4:41246005-41246024 Msa0851160:intron 40.0%
AAAGTTCAGGAACTACTTGC+AGG + chr5_4:41246175-41246194 Msa0851160:CDS 40.0%
! TGGCACAACTCTTTTACCAA+GGG - chr5_4:41246273-41246292 None:intergenic 40.0%
! TTGGCACAACTCTTTTACCA+AGG - chr5_4:41246274-41246293 None:intergenic 40.0%
GCAGTACTGTAAGTTATGAG+AGG + chr5_4:41246315-41246334 Msa0851160:intron 40.0%
CTAGAAACATATGCAACCTC+TGG - chr5_4:41246457-41246476 None:intergenic 40.0%
ATGGTATAAAGGTTCAAGGG+TGG + chr5_4:41246987-41247006 Msa0851160:CDS 40.0%
ATTTAGTCAATGTGCGCTCT+TGG + chr5_4:41247157-41247176 Msa0851160:intron 40.0%
TTTAGTCAATGTGCGCTCTT+GGG + chr5_4:41247158-41247177 Msa0851160:intron 40.0%
AACCTGCATTCATGCATACA+CGG - chr5_4:41247229-41247248 None:intergenic 40.0%
TAGAAGTTGTTGCATCTGTG+AGG - chr5_4:41247268-41247287 None:intergenic 40.0%
TCACAGATGCAACAACTTCT+AGG + chr5_4:41247267-41247286 Msa0851160:CDS 40.0%
TGCGATACAAGAGAAAGACA+TGG + chr5_4:41247293-41247312 Msa0851160:CDS 40.0%
GATACAAGAGAAAGACATGG+AGG + chr5_4:41247296-41247315 Msa0851160:CDS 40.0%
TAAAGACGCTCCTAATCACA+AGG + chr5_4:41247356-41247375 Msa0851160:CDS 40.0%
GCTTACTCCTGCTACAAAAT+TGG - chr5_4:41247483-41247502 None:intergenic 40.0%
AGATCTCGTGATCCGATTAG+TGG + chr5_4:41240440-41240459 Msa0851160:CDS 45.0%
TCGGAAGAGGAAGTTTATGG+TGG + chr5_4:41240608-41240627 Msa0851160:CDS 45.0%
ATCTCTTAGCAGCACCATTG+GGG - chr5_4:41240673-41240692 None:intergenic 45.0%
TCGTCCAGAGAAACACTTAC+TGG + chr5_4:41240758-41240777 Msa0851160:CDS 45.0%
TGGAAGACAAGGAATGACGA+GGG + chr5_4:41240778-41240797 Msa0851160:CDS 45.0%
TTAGCAGCACTCCTCATTAC+CGG - chr5_4:41240806-41240825 None:intergenic 45.0%
!! GTAATGAGGAGTGCTGCTAA+TGG + chr5_4:41240806-41240825 Msa0851160:CDS 45.0%
AAGGCAGAATGGTTTCACTG+AGG + chr5_4:41240829-41240848 Msa0851160:CDS 45.0%
GATACTACTCCCTACTTGTG+TGG - chr5_4:41240894-41240913 None:intergenic 45.0%
ATGGCACTCTTCCAAAAAGC+AGG + chr5_4:41240915-41240934 Msa0851160:CDS 45.0%
TGGCACTCTTCCAAAAAGCA+GGG + chr5_4:41240916-41240935 Msa0851160:CDS 45.0%
TGTCCAACACGTGTCAATGT+CGG + chr5_4:41241133-41241152 Msa0851160:intron 45.0%
! TGGAAGGTTATCTGATGACG+AGG + chr5_4:41241330-41241349 Msa0851160:CDS 45.0%
GTACTACGTGTTGCAGAAGT+TGG - chr5_4:41241427-41241446 None:intergenic 45.0%
!! AGAACTGCTACTGGTTCAGA+GGG + chr5_4:41241695-41241714 Msa0851160:intron 45.0%
GCCTTCCAACATTTCATGCA+AGG + chr5_4:41241747-41241766 Msa0851160:CDS 45.0%
AGTGCTTCTTCAACCAGAAG+AGG + chr5_4:41242084-41242103 Msa0851160:CDS 45.0%
TCAACCAGAAGAGGAGCTAA+TGG + chr5_4:41242093-41242112 Msa0851160:CDS 45.0%
TTCACCATTAGCTCCTCTTC+TGG - chr5_4:41242100-41242119 None:intergenic 45.0%
! ATTGGCAAGATGAAGGTGCA+AGG + chr5_4:41242172-41242191 Msa0851160:CDS 45.0%
TGCAGTACGCAAAGTCAAAG+TGG + chr5_4:41242273-41242292 Msa0851160:intron 45.0%
GCAGTACGCAAAGTCAAAGT+GGG + chr5_4:41242274-41242293 Msa0851160:intron 45.0%
CAGTACGCAAAGTCAAAGTG+GGG + chr5_4:41242275-41242294 Msa0851160:intron 45.0%
ACATGCTACATCCAGTAGGA+GGG - chr5_4:41242306-41242325 None:intergenic 45.0%
GATGACATGCTACATCCAGT+AGG - chr5_4:41242310-41242329 None:intergenic 45.0%
GTACCACATTTGCCTGCAAA+TGG + chr5_4:41242433-41242452 Msa0851160:CDS 45.0%
GAACCATTTGCAGGCAAATG+TGG - chr5_4:41242439-41242458 None:intergenic 45.0%
GTCTCTGGACTCCTAAAAGT+TGG + chr5_4:41242514-41242533 Msa0851160:CDS 45.0%
CATACCTTGCACAGCTTCAT+AGG - chr5_4:41242569-41242588 None:intergenic 45.0%
CTATGAAGCTGTGCAAGGTA+TGG + chr5_4:41242567-41242586 Msa0851160:intron 45.0%
ATATGGACTTCACTGGATCC+AGG - chr5_4:41242843-41242862 None:intergenic 45.0%
AACAGTCTGACAAAGTACGC+TGG + chr5_4:41243140-41243159 Msa0851160:intron 45.0%
GTATCTTGCCAACAAGCTCA+TGG - chr5_4:41243189-41243208 None:intergenic 45.0%
TTGTCTTTGTGGTTGCAGTG+TGG + chr5_4:41243357-41243376 Msa0851160:intron 45.0%
AAGTTCAGGGCTTTCAGCAA+AGG + chr5_4:41243430-41243449 Msa0851160:CDS 45.0%
TCTGTCAAGAGCCATTTCCA+TGG - chr5_4:41243474-41243493 None:intergenic 45.0%
GCTTGCACCTGTTATCATGA+AGG + chr5_4:41243714-41243733 Msa0851160:CDS 45.0%
ATGTCGATGATACCTCTTGG+TGG - chr5_4:41243762-41243781 None:intergenic 45.0%
GAGATGTCGATGATACCTCT+TGG - chr5_4:41243765-41243784 None:intergenic 45.0%
!! ATCTTTCTCTGGAATCGTCG+AGG + chr5_4:41244190-41244209 Msa0851160:CDS 45.0%
! AAGTTTAACAGCCGGTTCCA+AGG - chr5_4:41244249-41244268 None:intergenic 45.0%
CTGGAAGTAGTGACAGAAAC+TGG - chr5_4:41244312-41244331 None:intergenic 45.0%
CAGTTTCTGTCACTACTTCC+AGG + chr5_4:41244310-41244329 Msa0851160:CDS 45.0%
TTCTGTCACTACTTCCAGGT+TGG + chr5_4:41244314-41244333 Msa0851160:intron 45.0%
GAACTCAAGTTTCTCCAACC+TGG - chr5_4:41244331-41244350 None:intergenic 45.0%
! TCAGGTTGCGGCAAAAAAGA+GGG + chr5_4:41244421-41244440 Msa0851160:intron 45.0%
TAAGCGGTAGACATGGTCAA+AGG - chr5_4:41244512-41244531 None:intergenic 45.0%
! TGCACAGGGTTTTCATCTTC+TGG - chr5_4:41244535-41244554 None:intergenic 45.0%
TGGAAGCAGAAAGATTTGGC+AGG - chr5_4:41244948-41244967 None:intergenic 45.0%
GCAAAGCTCTGTGCTGTATA+TGG - chr5_4:41244968-41244987 None:intergenic 45.0%
! AGTTCTGCTACTGGTGATGA+TGG - chr5_4:41245033-41245052 None:intergenic 45.0%
GCAATGACAAGTTCTGCTAC+TGG - chr5_4:41245042-41245061 None:intergenic 45.0%
TAGTCCTATCAAAGGTGGAG+TGG + chr5_4:41245217-41245236 Msa0851160:intron 45.0%
CGAGTCGTGCAAATTAGACA+AGG + chr5_4:41245304-41245323 Msa0851160:CDS 45.0%
! GGTGCCATGCTATCTTTAAG+AGG - chr5_4:41245840-41245859 None:intergenic 45.0%
TAGACCGTTTGGCAAGTTTC+TGG - chr5_4:41245887-41245906 None:intergenic 45.0%
ATAGGCACATGTAGACCGTT+TGG - chr5_4:41245898-41245917 None:intergenic 45.0%
TAAATTCAACCCACCTCCTC+AGG - chr5_4:41245927-41245946 None:intergenic 45.0%
GCTTCTTGCTTACCAAATGC+TGG + chr5_4:41246101-41246120 Msa0851160:CDS 45.0%
GAACTTTGCTCTCAGCATCA+CGG - chr5_4:41246162-41246181 None:intergenic 45.0%
TGATGCTGAGAGCAAAGTTC+AGG + chr5_4:41246162-41246181 Msa0851160:CDS 45.0%
GAACTACTTGCAGGCTATTG+TGG + chr5_4:41246184-41246203 Msa0851160:CDS 45.0%
AAGGGAACAATACTGACCAG+AGG + chr5_4:41246438-41246457 Msa0851160:intron 45.0%
CTAGCTAACTGCTCTTTCAG+TGG - chr5_4:41246742-41246761 None:intergenic 45.0%
! GTTTTCATTGCCATCTGTCG+AGG + chr5_4:41246799-41246818 Msa0851160:CDS 45.0%
TTGCCATCTGTCGAGGTTAT+TGG + chr5_4:41246806-41246825 Msa0851160:CDS 45.0%
TGCCATCTGTCGAGGTTATT+GGG + chr5_4:41246807-41246826 Msa0851160:CDS 45.0%
AACCGTGTATGCATGAATGC+AGG + chr5_4:41247224-41247243 Msa0851160:intron 45.0%
GTATGCATGAATGCAGGTTC+TGG + chr5_4:41247230-41247249 Msa0851160:intron 45.0%
! GGTCACACCAATTTTGTAGC+AGG + chr5_4:41247473-41247492 Msa0851160:three_prime_UTR 45.0%
TAAGCAACTCAACTGCTCCT+AGG + chr5_4:41247498-41247517 Msa0851160:three_prime_UTR 45.0%
AGTGGAATGAAAAGTGGCGG+CGG + chr5_4:41240458-41240477 Msa0851160:CDS 50.0%
GCGGTTGAGACATTCGATAG+CGG + chr5_4:41240554-41240573 Msa0851160:CDS 50.0%
!! TATGGACGCCAGCGTTGATT+CGG + chr5_4:41240589-41240608 Msa0851160:CDS 50.0%
TTCCTCTTCCGAATCAACGC+TGG - chr5_4:41240600-41240619 None:intergenic 50.0%
TTGGGGACTCTGTTGTCTTG+TGG - chr5_4:41240656-41240675 None:intergenic 50.0%
CAAGACAACAGAGTCCCCAA+TGG + chr5_4:41240656-41240675 Msa0851160:CDS 50.0%
GGAATGTTGCTCAGATGCCA+CGG + chr5_4:41240696-41240715 Msa0851160:CDS 50.0%
CTGGAAGACAAGGAATGACG+AGG + chr5_4:41240777-41240796 Msa0851160:CDS 50.0%
ACAAGGAATGACGAGGGATC+CGG + chr5_4:41240784-41240803 Msa0851160:CDS 50.0%
!! TGAGGAGTGCTGCTAATGGA+AGG + chr5_4:41240810-41240829 Msa0851160:CDS 50.0%
GCTGCTAATGGAAGGCAGAA+TGG + chr5_4:41240818-41240837 Msa0851160:CDS 50.0%
GGATGATTCGTCGGATTCTG+CGG + chr5_4:41240850-41240869 Msa0851160:CDS 50.0%
AGCAGGGCTTATATGTCAGC+AGG + chr5_4:41240932-41240951 Msa0851160:CDS 50.0%
GCAGGGCTTATATGTCAGCA+GGG + chr5_4:41240933-41240952 Msa0851160:CDS 50.0%
ACTACGTAGCACGGACACTT+CGG + chr5_4:41241100-41241119 Msa0851160:intron 50.0%
TGTCCGACATTGACACGTGT+TGG - chr5_4:41241139-41241158 None:intergenic 50.0%
GTCAATGTCGGACACTCACA+CGG + chr5_4:41241145-41241164 Msa0851160:intron 50.0%
GTAAGTGTCTGTGCTGTGTC+CGG + chr5_4:41241219-41241238 Msa0851160:intron 50.0%
CACGGACACAGACACAATAC+CGG - chr5_4:41241241-41241260 None:intergenic 50.0%
TGTCTGTGTCCGTGCTTCAT+AGG + chr5_4:41241247-41241266 Msa0851160:intron 50.0%
GAACCATGGAGATGCAAGCT+CGG + chr5_4:41241501-41241520 Msa0851160:CDS 50.0%
TTTCCGAGCTTGCATCTCCA+TGG - chr5_4:41241507-41241526 None:intergenic 50.0%
TGCGTTCACAGAACTGCTAC+TGG + chr5_4:41241686-41241705 Msa0851160:intron 50.0%
!! CAGAACTGCTACTGGTTCAG+AGG + chr5_4:41241694-41241713 Msa0851160:intron 50.0%
AAGGCGAGGTGGTTGTGAAT+TGG - chr5_4:41241732-41241751 None:intergenic 50.0%
TGAAATGTTGGAAGGCGAGG+TGG - chr5_4:41241743-41241762 None:intergenic 50.0%
GCATGAAATGTTGGAAGGCG+AGG - chr5_4:41241746-41241765 None:intergenic 50.0%
! TTTTCAGTGCTCTTGGGCCA+TGG + chr5_4:41241852-41241871 Msa0851160:intron 50.0%
GACATGCTACATCCAGTAGG+AGG - chr5_4:41242307-41242326 None:intergenic 50.0%
GGCACGCTCTTAGGAAAGTT+CGG + chr5_4:41242407-41242426 Msa0851160:CDS 50.0%
TGTGTCAGGGAACCATTTGC+AGG - chr5_4:41242448-41242467 None:intergenic 50.0%
TCCTCCTATGAAGCTGTGCA+AGG + chr5_4:41242562-41242581 Msa0851160:CDS 50.0%
ACCTTGCACAGCTTCATAGG+AGG - chr5_4:41242566-41242585 None:intergenic 50.0%
ACGCCCAAAATGCTTTCCCT+TGG - chr5_4:41242996-41243015 None:intergenic 50.0%
TATCAGCGATAGCAGCCACT+TGG - chr5_4:41243027-41243046 None:intergenic 50.0%
GGCTGCTATCGCTGATAATC+CGG + chr5_4:41243030-41243049 Msa0851160:CDS 50.0%
AGTCTGACAAAGTACGCTGG+TGG + chr5_4:41243143-41243162 Msa0851160:intron 50.0%
! CAAGCTCATGGTCTGGTTCA+CGG - chr5_4:41243177-41243196 None:intergenic 50.0%
GAACCAGACCATGAGCTTGT+TGG + chr5_4:41243178-41243197 Msa0851160:CDS 50.0%
TTGCCAACAAGCTCATGGTC+TGG - chr5_4:41243184-41243203 None:intergenic 50.0%
! GTTGCAGTGTGGTTCTGTAG+CGG + chr5_4:41243368-41243387 Msa0851160:intron 50.0%
GGAGACAGTTGCATATGACC+TGG + chr5_4:41243389-41243408 Msa0851160:CDS 50.0%
AAGGCAATCTGCTGTTGGTG+TGG - chr5_4:41243677-41243696 None:intergenic 50.0%
AACTTCCTTGAGCCACCAAG+AGG + chr5_4:41243747-41243766 Msa0851160:CDS 50.0%
! TGATACCTCTTGGTGGCTCA+AGG - chr5_4:41243755-41243774 None:intergenic 50.0%
TCGACTACTAGGAGAGACCA+AGG + chr5_4:41244109-41244128 Msa0851160:CDS 50.0%
! CTCAGGTTGCGGCAAAAAAG+AGG + chr5_4:41244420-41244439 Msa0851160:intron 50.0%
CGGCAAAAAAGAGGGCTAGA+AGG + chr5_4:41244429-41244448 Msa0851160:CDS 50.0%
CTTCTGGTAAGCGGTAGACA+TGG - chr5_4:41244519-41244538 None:intergenic 50.0%
CGGTGGACAAGATATGAGGA+AGG - chr5_4:41245004-41245023 None:intergenic 50.0%
CTGTCGGTGGACAAGATATG+AGG - chr5_4:41245008-41245027 None:intergenic 50.0%
CTCATATCTTGTCCACCGAC+AGG + chr5_4:41245006-41245025 Msa0851160:CDS 50.0%
!! ACTGGTGATGATGGACCTGT+CGG - chr5_4:41245024-41245043 None:intergenic 50.0%
GCATCCACTCCACCTTTGAT+AGG - chr5_4:41245224-41245243 None:intergenic 50.0%
TGACATGTATGAGCGGCTGA+AGG + chr5_4:41245505-41245524 Msa0851160:CDS 50.0%
ATGAGGTCATCATTTGCCGC+TGG + chr5_4:41245543-41245562 Msa0851160:CDS 50.0%
CCAAGGTATATTCTGGCCAG+CGG - chr5_4:41245562-41245581 None:intergenic 50.0%
ACGGTCTACATGTGCCTATG+TGG + chr5_4:41245899-41245918 Msa0851160:CDS 50.0%
ATGTGCCTATGTGGTTCCTG+AGG + chr5_4:41245908-41245927 Msa0851160:CDS 50.0%
TATGTGGTTCCTGAGGAGGT+GGG + chr5_4:41245915-41245934 Msa0851160:intron 50.0%
GATGTCGAGCATCCTCTTCA+AGG - chr5_4:41246045-41246064 None:intergenic 50.0%
TGCTCGACATCTTACGTCCA+AGG + chr5_4:41246054-41246073 Msa0851160:CDS 50.0%
! GGTGCTGTGTTTCCAGCATT+TGG - chr5_4:41246116-41246135 None:intergenic 50.0%
AATGCTGGAAACACAGCACC+TGG + chr5_4:41246116-41246135 Msa0851160:CDS 50.0%
GGCTATTGTGGAGAAACTCG+TGG + chr5_4:41246196-41246215 Msa0851160:CDS 50.0%
GTCCCAATAACCTCGACAGA+TGG - chr5_4:41246812-41246831 None:intergenic 50.0%
TCGAGGTTATTGGGACCGAA+TGG + chr5_4:41246816-41246835 Msa0851160:CDS 50.0%
CGAGGTTATTGGGACCGAAT+GGG + chr5_4:41246817-41246836 Msa0851160:CDS 50.0%
TTATTGGGACCGAATGGGAC+AGG + chr5_4:41246822-41246841 Msa0851160:CDS 50.0%
CGAACCTCCATGATGCATCT+AGG - chr5_4:41247324-41247343 None:intergenic 50.0%
CGCACTTAGATGGGTCAGAG+AGG + chr5_4:41240117-41240136 Msa0851160:CDS 55.0%
ATGAAAAGTGGCGGCGGTAG+AGG + chr5_4:41240464-41240483 Msa0851160:CDS 55.0%
TGAAAAGTGGCGGCGGTAGA+GGG + chr5_4:41240465-41240484 Msa0851160:CDS 55.0%
AATGTCTCAACCGCCGAGAC+AGG - chr5_4:41240548-41240567 None:intergenic 55.0%
TTGCTCAGATGCCACGGTCT+CGG + chr5_4:41240702-41240721 Msa0851160:CDS 55.0%
TGACGAGGGATCCGGTAATG+AGG + chr5_4:41240792-41240811 Msa0851160:CDS 55.0%
! CCACAAAATGGGGGTGCACT+CGG - chr5_4:41241367-41241386 None:intergenic 55.0%
GCGTCTTTGCCTTCACGCTT+GGG + chr5_4:41241904-41241923 Msa0851160:CDS 55.0%
! CTTCTGGTTGGCACGCTCTT+AGG + chr5_4:41242398-41242417 Msa0851160:CDS 55.0%
GGATCCAGGCTGCAACCTAA+TGG - chr5_4:41242829-41242848 None:intergenic 55.0%
TGGGCGTGTTCTTGTCCAAG+TGG + chr5_4:41243009-41243028 Msa0851160:CDS 55.0%
! TTAACAGCCGGTTCCAAGGC+AGG - chr5_4:41244245-41244264 None:intergenic 55.0%
!! CAGAAACTGGTTTGGGCCTC+AGG - chr5_4:41244299-41244318 None:intergenic 55.0%
CCGCTGGCCAGAATATACCT+TGG + chr5_4:41245559-41245578 Msa0851160:CDS 55.0%
TGCCTATGTGGTTCCTGAGG+AGG + chr5_4:41245911-41245930 Msa0851160:CDS 55.0%
CACCTCCTCAGGAACCACAT+AGG - chr5_4:41245916-41245935 None:intergenic 55.0%
CTATGTGGTTCCTGAGGAGG+TGG + chr5_4:41245914-41245933 Msa0851160:intron 55.0%
ACTTCGCTAAGTCGCTCACC+AGG - chr5_4:41246137-41246156 None:intergenic 55.0%
TCAATGTGCGCTCTTGGGTC+CGG + chr5_4:41247163-41247182 Msa0851160:intron 55.0%
CGCTCTTGGGTCCGGATTAT+GGG + chr5_4:41247171-41247190 Msa0851160:intron 55.0%
!! GGAGGCACCTAGATGCATCA+TGG + chr5_4:41247314-41247333 Msa0851160:CDS 55.0%
GGCACCTAGATGCATCATGG+AGG + chr5_4:41247317-41247336 Msa0851160:CDS 55.0%
!! CGCCAGCGTTGATTCGGAAG+AGG + chr5_4:41240595-41240614 Msa0851160:CDS 60.0%
TCACTCGCATACCGAGACCG+TGG - chr5_4:41240716-41240735 None:intergenic 60.0%
GCACGGACACTTCGGATCGA+AGG + chr5_4:41241108-41241127 Msa0851160:intron 60.0%
! CCGAGTGCACCCCCATTTTG+TGG + chr5_4:41241364-41241383 Msa0851160:CDS 60.0%
GTGAAGGCAAAGACGCGCAC+AGG - chr5_4:41241900-41241919 None:intergenic 60.0%
CGCGTCTTTGCCTTCACGCT+TGG + chr5_4:41241903-41241922 Msa0851160:CDS 60.0%
ACTGCATCGCCCAAGCGTGA+AGG - chr5_4:41241916-41241935 None:intergenic 60.0%
CGCTTGGGCGATGCAGTGTA+TGG + chr5_4:41241919-41241938 Msa0851160:CDS 60.0%
! GACGCCATTAGGTTGCAGCC+TGG + chr5_4:41242822-41242841 Msa0851160:CDS 60.0%
GGAGCTGCATGACTGGATGC+TGG - chr5_4:41244224-41244243 None:intergenic 60.0%
CAAGGCAGGAGCTGCATGAC+TGG - chr5_4:41244231-41244250 None:intergenic 60.0%
CAGTCATGCAGCTCCTGCCT+TGG + chr5_4:41244229-41244248 Msa0851160:CDS 60.0%
TGCAGCTCCTGCCTTGGAAC+CGG + chr5_4:41244235-41244254 Msa0851160:CDS 60.0%
!! GGTGATGATGGACCTGTCGG+TGG - chr5_4:41245021-41245040 None:intergenic 60.0%
GCGCTCTTGGGTCCGGATTA+TGG + chr5_4:41247170-41247189 Msa0851160:intron 60.0%
AGTGGCGGCGGTAGAGGGTT+TGG + chr5_4:41240470-41240489 Msa0851160:CDS 65.0%
GTGGGGCTCGACCCTCCTAC+TGG + chr5_4:41242292-41242311 Msa0851160:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 41239733 41247734 41239733 ID=Msa0851160;Name=Msa0851160
chr5_4 mRNA 41239733 41247734 41239733 ID=Msa0851160-mRNA-1;Parent=Msa0851160;Name=Msa0851160-mRNA-1;_AED=0.12;_eAED=0.12;_QI=358|1|1|1|1|1|22|336|1229
chr5_4 exon 41239733 41240138 41239733 ID=Msa0851160-mRNA-1:exon:12988;Parent=Msa0851160-mRNA-1
chr5_4 exon 41240410 41241006 41240410 ID=Msa0851160-mRNA-1:exon:12989;Parent=Msa0851160-mRNA-1
chr5_4 exon 41241328 41241536 41241328 ID=Msa0851160-mRNA-1:exon:12990;Parent=Msa0851160-mRNA-1
chr5_4 exon 41241697 41241768 41241697 ID=Msa0851160-mRNA-1:exon:12991;Parent=Msa0851160-mRNA-1
chr5_4 exon 41241859 41241993 41241859 ID=Msa0851160-mRNA-1:exon:12992;Parent=Msa0851160-mRNA-1
chr5_4 exon 41242075 41242193 41242075 ID=Msa0851160-mRNA-1:exon:12993;Parent=Msa0851160-mRNA-1
chr5_4 exon 41242278 41242583 41242278 ID=Msa0851160-mRNA-1:exon:12994;Parent=Msa0851160-mRNA-1
chr5_4 exon 41242778 41242865 41242778 ID=Msa0851160-mRNA-1:exon:12995;Parent=Msa0851160-mRNA-1
chr5_4 exon 41242946 41243051 41242946 ID=Msa0851160-mRNA-1:exon:12996;Parent=Msa0851160-mRNA-1
chr5_4 exon 41243145 41243258 41243145 ID=Msa0851160-mRNA-1:exon:12997;Parent=Msa0851160-mRNA-1
chr5_4 exon 41243375 41243538 41243375 ID=Msa0851160-mRNA-1:exon:12998;Parent=Msa0851160-mRNA-1
chr5_4 exon 41243648 41243768 41243648 ID=Msa0851160-mRNA-1:exon:12999;Parent=Msa0851160-mRNA-1
chr5_4 exon 41244107 41244331 41244107 ID=Msa0851160-mRNA-1:exon:13000;Parent=Msa0851160-mRNA-1
chr5_4 exon 41244425 41244615 41244425 ID=Msa0851160-mRNA-1:exon:13001;Parent=Msa0851160-mRNA-1
chr5_4 exon 41244936 41245103 41244936 ID=Msa0851160-mRNA-1:exon:13002;Parent=Msa0851160-mRNA-1
chr5_4 exon 41245220 41245325 41245220 ID=Msa0851160-mRNA-1:exon:13003;Parent=Msa0851160-mRNA-1
chr5_4 exon 41245455 41245592 41245455 ID=Msa0851160-mRNA-1:exon:13004;Parent=Msa0851160-mRNA-1
chr5_4 exon 41245771 41245932 41245771 ID=Msa0851160-mRNA-1:exon:13005;Parent=Msa0851160-mRNA-1
chr5_4 exon 41246023 41246223 41246023 ID=Msa0851160-mRNA-1:exon:13006;Parent=Msa0851160-mRNA-1
chr5_4 exon 41246649 41246843 41246649 ID=Msa0851160-mRNA-1:exon:13007;Parent=Msa0851160-mRNA-1
chr5_4 exon 41246946 41247017 41246946 ID=Msa0851160-mRNA-1:exon:13008;Parent=Msa0851160-mRNA-1
chr5_4 exon 41247246 41247734 41247246 ID=Msa0851160-mRNA-1:exon:13009;Parent=Msa0851160-mRNA-1
chr5_4 five_prime_UTR 41239733 41240090 41239733 ID=Msa0851160-mRNA-1:five_prime_utr;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41240091 41240138 41240091 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41240410 41241006 41240410 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41241328 41241536 41241328 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41241697 41241768 41241697 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41241859 41241993 41241859 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41242075 41242193 41242075 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41242278 41242583 41242278 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41242778 41242865 41242778 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41242946 41243051 41242946 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41243145 41243258 41243145 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41243375 41243538 41243375 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41243648 41243768 41243648 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41244107 41244331 41244107 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41244425 41244615 41244425 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41244936 41245103 41244936 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41245220 41245325 41245220 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41245455 41245592 41245455 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41245771 41245932 41245771 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41246023 41246223 41246023 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41246649 41246843 41246649 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41246946 41247017 41246946 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 CDS 41247246 41247398 41247246 ID=Msa0851160-mRNA-1:cds;Parent=Msa0851160-mRNA-1
chr5_4 three_prime_UTR 41247399 41247734 41247399 ID=Msa0851160-mRNA-1:three_prime_utr;Parent=Msa0851160-mRNA-1
Gene Sequence

>Msa0851160

ATGTTCACTGAAGGACTTGACAAAAACGCACTTAGATGGGTCAGAGAGAAGGAAGTGCCATTCTCAAACACAGCAATGAGATCTCGTGATCCGATTAGTGGAATGAAAAGTGGCGGCGGTAGAGGGTTTGGATTACCACCACCATCAAAATTTAGGAGTGGTCATCTTCCTGCTAATAAGTTACCTGTCTCGGCGGTTGAGACATTCGATAGCGGTTCAAATAGTGATATGGACGCCAGCGTTGATTCGGAAGAGGAAGTTTATGGTGGAAGGTATTCTTTGGATTCATCACCACAAGACAACAGAGTCCCCAATGGTGCTGCTAAGAGATATGGGAATGTTGCTCAGATGCCACGGTCTCGGTATGCGAGTGATTACACGTTCTCTGATGTTAGTTCGTCCAGAGAAACACTTACTGGAAGACAAGGAATGACGAGGGATCCGGTAATGAGGAGTGCTGCTAATGGAAGGCAGAATGGTTTCACTGAGGATGATTCGTCGGATTCTGCGGCTAGCTCAGAATTTTCTACCACACAAGTAGGGAGTAGTATCAATGGCACTCTTCCAAAAAGCAGGGCTTATATGTCAGCAGGGTATGCTTCTAGTGTACCTTCAAGGATGAATGTTCAAAGTTCTGCAGAAAAGAGTGGAAGGTTATCTGATGACGAGGACGAAGACATTCCGAGTGCACCCCCATTTTGTGGTTCTACTCAAGAGATAAGACAAACTAACGAGGAAATTCCAACTTCTGCAACACGTAGTACTCCAAATAAAGCAGAATCAAGTACTTTGAAATCTGTATCCAGGGATAAGTTAGAGAACCATGGAGATGCAAGCTCGGAAAAATTCGTTAGAACTGCTACTGGTTCAGAGGGTGCTGCATCTTCCAATTCACAACCACCTCGCCTTCCAACATTTCATGCAAGTGCTCTTGGGCCATGGTATGCAGTAATTGCATACGACGCCTGTGCGCGTCTTTGCCTTCACGCTTGGGCGATGCAGTGTATGGAAGCTCCAATGTTTTTGGAAAATGAATGCTCTTTACTTAGAGATGCATTTGGATTGCGACAAGTGCTTCTTCAACCAGAAGAGGAGCTAATGGTGAAATGCAATGGAGAACTTTCTAGTGAGGGTGTTGCTCCTAAACTGAAAAAACTTATTGGCAAGATGAAGGTGCAAGTACGCAAAGTCAAAGTGGGGCTCGACCCTCCTACTGGATGTAGCATGTCATCAATAGTGACACATAAAATTAAAATGGATTCAATGCGACACCACTTCTCAAATTTGCAGTCAAAACTATCTTCTGGTTGGCACGCTCTTAGGAAAGTTCGGTTTGTACCACATTTGCCTGCAAATGGTTCCCTGACACATAAAAGCTTGGCATATGTGCATGCTAGCACACGCTATATACAACAAGTCTCTGGACTCCTAAAAGTTGGTGTAACAACTTTGCGGAATAGTTCATCCTCCTATGAAGCTGTGCAAGAGACATTCACGTGTTTCTTACGACTCAAAAGTGTAGTTGAAGAAGACGCCATTAGGTTGCAGCCTGGATCCAGTGAAGTCCATATGTTTTTTCCAGATAGTCTTGGAGATGATTTGCTCATTGAAGTTCAAGATTCCAAGGGAAAGCATTTTGGGCGTGTTCTTGTCCAAGTGGCTGCTATCGCTGATAATCCGTCTGACAAAGTACGCTGGTGGAATGTTTACCGTGAACCAGACCATGAGCTTGTTGGCAAGATACAGCTTTATATACTCTATTCAACCAGTGCAGATGACAATAGTCATCTTAAGTGTGGTTCTGTAGCGGAGACAGTTGCATATGACCTGGTTCTAGAAGTTGCAATGAAAGTTCAGGGCTTTCAGCAAAGGAACCTAGAATTACATGGTCCATGGAAATGGCTCTTGACAGAGTTTGCTTCATATTATGGTGTGTCTGAGATTTATACGAAGCTGAGATATCTATCGTATGTCATGGATGTTGCCACACCAACAGCAGATTGCCTTAACTTGGTATATAATTTGCTTGCACCTGTTATCATGAAGGGAAATAGCAAAACTTCCTTGAGCCACCAAGAGAATCGACTACTAGGAGAGACCAAGGACGAAATTGAACAGATACTCACACTTACATTTGAGAATTACAAGTCACTTGATGAGTCATCTTTCTCTGGAATCGTCGAGGTTTTCAGACCAGCATCCAGTCATGCAGCTCCTGCCTTGGAACCGGCTGTTAAACTTTACAAGCTTCTTCATGATATCTTATCTCCTGAGGCCCAAACCAGTTTCTGTCACTACTTCCAGGTTGCGGCAAAAAAGAGGGCTAGAAGGCACCTTTCTGACACAGATGAATATATTGCACAGAATAATGAAAGCTGTTTGATGGATCCTTTGACCATGTCTACCGCTTACCAGAAGATGAAAACCCTGTGCATAAATCTTAGGAATGAGATCTATGCTGATATTCAGATTCATAATCAAAATATACTTCCTAGCTTTGTAGACCTGCCAAATCTTTCTGCTTCCATATACAGCACAGAGCTTTGCAATAGATTACGAGCCTTCCTCATATCTTGTCCACCGACAGGTCCATCATCACCAGTAGCAGAACTTGTCATTGCAACATCCGATTTTCAAAGAGATCTTTCAGGCTGGAACATTAATCCTATCAAAGGTGGAGTGGATGCAAAAGAGTTGTTCCATTTGTATATTCTTGTTTGGATCCAAGATAAACGTCTATCTTTGCTCGAGTCGTGCAAATTAGACAAGGTGAAATGGTCTGGTGTTAGAACACAACATTCTACTACTCCCTTTGTTGATGACATGTATGAGCGGCTGAAGGAAACATTGACAGACTATGAGGTCATCATTTGCCGCTGGCCAGAATATACCTTGGTTCTAGAAAATGCAATAGCTGATATTGAGAAGGCGATTGTGGAAGCTTTAGATAAACAGTATGCGGATGTATTAGCTCCTCTTAAAGATAGCATGGCACCTAAGAAATTTGGGCTTAAATATGTCCAGAAACTTGCCAAACGGTCTACATGTGCCTATGTGGTTCCTGAGGAGGTTGGAATTCTTTTGAATTCCTTGAAGAGGATGCTCGACATCTTACGTCCAAGGATTGAATCACAGTTCAAATCATGGGCTTCTTGCTTACCAAATGCTGGAAACACAGCACCTGGTGAGCGACTTAGCGAAGTGACCGTGATGCTGAGAGCAAAGTTCAGGAACTACTTGCAGGCTATTGTGGAGAAACTCGTGGAAAATACAAAGTTACAGAATGCTACAAAATTAAAGAAGATTCTTCAAGATTCAAAGGAAACAGTGGTAGAGTCTGATTTAAAAAGTAGAATGCAACCACTGAAAGAGCAGTTAGCTAGTACCATAAGCTATCTTCACAGTATTTGTGAAACTCATGTTTTCATTGCCATCTGTCGAGGTTATTGGGACCGAATGGGACAGGAAATTTTGAGTTTCTTGGAGAACAGAAAAGAGAATAGATCATGGTATAAAGGTTCAAGGGTGGCTGTTTCTGTTCTGGATGATACATTTGCCTCACAGATGCAACAACTTCTAGGAAATGCGATACAAGAGAAAGACATGGAGGCACCTAGATGCATCATGGAGGTTCGTTCTATGCTATGTAAAGACGCTCCTAATCACAAGGACAACAGTTTTTACTATTAG
Protein sequence

>Msa0851160

MFTEGLDKNALRWVREKEVPFSNTAMRSRDPISGMKSGGGRGFGLPPPSKFRSGHLPANKLPVSAVETFDSGSNSDMDASVDSEEEVYGGRYSLDSSPQDNRVPNGAAKRYGNVAQMPRSRYASDYTFSDVSSSRETLTGRQGMTRDPVMRSAANGRQNGFTEDDSSDSAASSEFSTTQVGSSINGTLPKSRAYMSAGYASSVPSRMNVQSSAEKSGRLSDDEDEDIPSAPPFCGSTQEIRQTNEEIPTSATRSTPNKAESSTLKSVSRDKLENHGDASSEKFVRTATGSEGAASSNSQPPRLPTFHASALGPWYAVIAYDACARLCLHAWAMQCMEAPMFLENECSLLRDAFGLRQVLLQPEEELMVKCNGELSSEGVAPKLKKLIGKMKVQVRKVKVGLDPPTGCSMSSIVTHKIKMDSMRHHFSNLQSKLSSGWHALRKVRFVPHLPANGSLTHKSLAYVHASTRYIQQVSGLLKVGVTTLRNSSSSYEAVQETFTCFLRLKSVVEEDAIRLQPGSSEVHMFFPDSLGDDLLIEVQDSKGKHFGRVLVQVAAIADNPSDKVRWWNVYREPDHELVGKIQLYILYSTSADDNSHLKCGSVAETVAYDLVLEVAMKVQGFQQRNLELHGPWKWLLTEFASYYGVSEIYTKLRYLSYVMDVATPTADCLNLVYNLLAPVIMKGNSKTSLSHQENRLLGETKDEIEQILTLTFENYKSLDESSFSGIVEVFRPASSHAAPALEPAVKLYKLLHDILSPEAQTSFCHYFQVAAKKRARRHLSDTDEYIAQNNESCLMDPLTMSTAYQKMKTLCINLRNEIYADIQIHNQNILPSFVDLPNLSASIYSTELCNRLRAFLISCPPTGPSSPVAELVIATSDFQRDLSGWNINPIKGGVDAKELFHLYILVWIQDKRLSLLESCKLDKVKWSGVRTQHSTTPFVDDMYERLKETLTDYEVIICRWPEYTLVLENAIADIEKAIVEALDKQYADVLAPLKDSMAPKKFGLKYVQKLAKRSTCAYVVPEEVGILLNSLKRMLDILRPRIESQFKSWASCLPNAGNTAPGERLSEVTVMLRAKFRNYLQAIVEKLVENTKLQNATKLKKILQDSKETVVESDLKSRMQPLKEQLASTISYLHSICETHVFIAICRGYWDRMGQEILSFLENRKENRSWYKGSRVAVSVLDDTFASQMQQLLGNAIQEKDMEAPRCIMEVRSMLCKDAPNHKDNSFYY*