Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0810930 | XP_003615261.2 | 98.780 | 1230 | 14 | 1 | 1 | 1229 | 1 | 1230 | 0.0 | 2530 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0810930 | G7KBI4 | 98.780 | 1230 | 14 | 1 | 1 | 1229 | 1 | 1230 | 0.0 | 2530 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002420 | Msa0810930 | 0.820451 | 6.813674e-53 | -8.615850e-47 |
Msa0040790 | Msa0810930 | 0.804357 | 2.246169e-49 | -8.615850e-47 |
Msa0077560 | Msa0810930 | 0.802504 | 5.437266e-49 | -8.615850e-47 |
Msa0099230 | Msa0810930 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
Msa0624900 | Msa0810930 | 0.818615 | 1.787075e-52 | -8.615850e-47 |
Msa0641990 | Msa0810930 | 0.803070 | 4.154789e-49 | -8.615850e-47 |
Msa0652770 | Msa0810930 | 0.808483 | 3.029048e-50 | -8.615850e-47 |
Msa0703950 | Msa0810930 | 0.812980 | 3.225483e-51 | -8.615850e-47 |
Msa0706760 | Msa0810930 | 0.813005 | 3.186246e-51 | -8.615850e-47 |
Msa0716890 | Msa0810930 | 0.804467 | 2.130516e-49 | -8.615850e-47 |
Msa0754710 | Msa0810930 | 0.802091 | 6.612764e-49 | -8.615850e-47 |
Msa0756610 | Msa0810930 | 0.808846 | 2.534329e-50 | -8.615850e-47 |
Msa0810930 | Msa0835930 | 0.812483 | 4.144891e-51 | -8.615850e-47 |
Msa0810930 | Msa0851160 | 0.944971 | 7.294795e-104 | -8.615850e-47 |
Msa0810930 | Msa0896710 | 0.826167 | 3.146861e-54 | -8.615850e-47 |
Msa0810930 | Msa0902360 | 0.993239 | 2.220925e-198 | -8.615850e-47 |
Msa0810930 | Msa0945190 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
Msa0810930 | Msa0996820 | 0.830881 | 2.287082e-55 | -8.615850e-47 |
Msa0810930 | Msa1072940 | 0.819115 | 1.375822e-52 | -8.615850e-47 |
Msa0810930 | Msa1074890 | 0.803691 | 3.089317e-49 | -8.615850e-47 |
Msa0810930 | Msa1115740 | 0.804191 | 2.431871e-49 | -8.615850e-47 |
Msa0810930 | Msa1160920 | 0.802567 | 5.277618e-49 | -8.615850e-47 |
Msa0810930 | Msa1165090 | 0.821676 | 3.557365e-53 | -8.615850e-47 |
Msa0810930 | Msa1206230 | 0.826457 | 2.685317e-54 | -8.615850e-47 |
Msa0810930 | Msa1207190 | 0.824211 | 9.125443e-54 | -8.615850e-47 |
Msa0810930 | Msa1257440 | 0.816219 | 6.191009e-52 | -8.615850e-47 |
Msa0810930 | Msa1288760 | 0.844808 | 6.010356e-59 | -8.615850e-47 |
Msa0810930 | Msa1297970 | 0.821148 | 4.710038e-53 | -8.615850e-47 |
Msa0810930 | Msa1305250 | 0.817987 | 2.479306e-52 | -8.615850e-47 |
Msa0810930 | Msa1373170 | 0.806100 | 9.689941e-50 | -8.615850e-47 |
Msa0810930 | Msa1412000 | 0.817011 | 4.113788e-52 | -8.615850e-47 |
Msa0810930 | Msa1414390 | 0.992178 | 9.387086e-192 | -8.615850e-47 |
Msa0810930 | Msa1427110 | 0.842754 | 2.131267e-58 | -8.615850e-47 |
Msa0124910 | Msa0810930 | 0.816319 | 5.878165e-52 | -8.615850e-47 |
Msa0152870 | Msa0810930 | 0.803590 | 3.241661e-49 | -8.615850e-47 |
Msa0231630 | Msa0810930 | 0.831074 | 2.051131e-55 | -8.615850e-47 |
Msa0389690 | Msa0810930 | 0.835079 | 2.067233e-56 | -8.615850e-47 |
Msa0416020 | Msa0810930 | 0.857083 | 2.077848e-62 | -8.615850e-47 |
Msa0430230 | Msa0810930 | 0.825458 | 4.636244e-54 | -8.615850e-47 |
Msa0435370 | Msa0810930 | 0.803259 | 3.796713e-49 | -8.615850e-47 |
Msa0435570 | Msa0810930 | 0.810928 | 9.032240e-51 | -8.615850e-47 |
Msa0254930 | Msa0810930 | 0.805281 | 1.439843e-49 | -8.615850e-47 |
Msa0307270 | Msa0810930 | 0.830037 | 3.679517e-55 | -8.615850e-47 |
Msa0508180 | Msa0810930 | 0.867209 | 1.619690e-65 | -8.615850e-47 |
Msa0515520 | Msa0810930 | 0.800866 | 1.178635e-48 | -8.615850e-47 |
Msa0519760 | Msa0810930 | 0.840685 | 7.492568e-58 | -8.615850e-47 |
Msa0519810 | Msa0810930 | 0.819429 | 1.166812e-52 | -8.615850e-47 |
Msa0519840 | Msa0810930 | 0.838296 | 3.129002e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0810930 | MtrunA17_Chr5g0427251 | 98.780 | 1230 | 14 | 1 | 1 | 1229 | 1 | 1230 | 0.0 | 2530 |
Msa0810930 | MtrunA17_Chr5g0448351 | 45.393 | 1042 | 492 | 15 | 214 | 1229 | 207 | 1197 | 0.0 | 902 |
Msa0810930 | MtrunA17_Chr5g0401841 | 61.667 | 60 | 14 | 2 | 644 | 694 | 4 | 63 | 3.20e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0810930 | AT4G24610.1 | 62.648 | 1186 | 395 | 12 | 47 | 1229 | 10 | 1150 | 0.0 | 1495 |
Msa0810930 | AT4G24610.3 | 62.679 | 1187 | 397 | 12 | 47 | 1229 | 10 | 1154 | 0.0 | 1493 |
Msa0810930 | AT4G24610.4 | 62.595 | 1187 | 395 | 13 | 47 | 1229 | 10 | 1151 | 0.0 | 1491 |
Msa0810930 | AT4G24610.2 | 62.626 | 1188 | 397 | 13 | 47 | 1229 | 10 | 1155 | 0.0 | 1489 |
Msa0810930 | AT5G65440.1 | 53.846 | 1014 | 449 | 7 | 229 | 1229 | 43 | 1050 | 0.0 | 1136 |
Msa0810930 | AT5G65440.8 | 53.846 | 1014 | 449 | 7 | 229 | 1229 | 43 | 1050 | 0.0 | 1136 |
Msa0810930 | AT5G65440.9 | 53.846 | 1014 | 449 | 7 | 229 | 1229 | 43 | 1050 | 0.0 | 1136 |
Msa0810930 | AT5G65440.6 | 56.550 | 939 | 401 | 4 | 292 | 1229 | 159 | 1091 | 0.0 | 1133 |
Msa0810930 | AT5G65440.4 | 56.550 | 939 | 401 | 4 | 292 | 1229 | 159 | 1091 | 0.0 | 1133 |
Msa0810930 | AT5G65440.7 | 56.550 | 939 | 401 | 4 | 292 | 1229 | 159 | 1091 | 0.0 | 1133 |
Msa0810930 | AT5G65440.3 | 54.573 | 973 | 401 | 5 | 292 | 1229 | 159 | 1125 | 0.0 | 1114 |
Msa0810930 | AT5G65440.2 | 53.854 | 947 | 416 | 8 | 229 | 1160 | 43 | 983 | 0.0 | 1044 |
Msa0810930 | AT5G65440.5 | 56.766 | 872 | 368 | 5 | 292 | 1160 | 159 | 1024 | 0.0 | 1042 |
Msa0810930 | AT5G48310.2 | 43.744 | 1031 | 500 | 17 | 221 | 1229 | 156 | 1128 | 0.0 | 858 |
Msa0810930 | AT5G48310.1 | 45.955 | 927 | 439 | 13 | 314 | 1229 | 280 | 1155 | 0.0 | 850 |
Find 299 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTTAATTCTTTAGGTTTA+AGG | 0.101745 | 5_3:-39879830 | Msa0810930:five_prime_UTR |
GTACTTGATTCTGCTTTATT+TGG | 0.141623 | 5_3:+39878402 | None:intergenic |
ACAGAGTTTGCTTCATATTA+TGG | 0.161719 | 5_3:-39876359 | Msa0810930:CDS |
GTAAATAAAGAGGGTTATTA+AGG | 0.183967 | 5_3:-39872428 | Msa0810930:three_prime_UTR |
CTTCTGGTTGGCACGCTCTT+AGG | 0.188615 | 5_3:-39877450 | Msa0810930:CDS |
AGCATGGCACCTAAGAAATT+TGG | 0.201534 | 5_3:-39873997 | Msa0810930:CDS |
GATTCCAAGGGAAAGCATTT+TGG | 0.208871 | 5_3:-39876859 | Msa0810930:CDS |
CGCGTCTTTGCCTTCACGCT+TGG | 0.211183 | 5_3:-39877946 | Msa0810930:CDS |
TAGACCGTTTGGCAAGTTTC+TGG | 0.237058 | 5_3:+39873962 | None:intergenic |
GCTTACTCCTGCTACAAAAT+TGG | 0.256730 | 5_3:+39872366 | None:intergenic |
GATTCGGAAGAGGAAGTTTA+TGG | 0.256978 | 5_3:-39879245 | Msa0810930:CDS |
TATTTAAGCCCAAATTTCTT+AGG | 0.261853 | 5_3:+39873988 | None:intergenic |
TTGCCATCTGTCGAGGTTAT+TGG | 0.267012 | 5_3:-39873040 | Msa0810930:CDS |
TGCATAAAGCTTAATTCTTT+AGG | 0.276770 | 5_3:-39879837 | Msa0810930:five_prime_UTR |
CTATTTCCCTTCATGATAAC+AGG | 0.279831 | 5_3:+39876127 | None:intergenic |
AGTGACACATAAAATTAAAA+TGG | 0.285788 | 5_3:-39877515 | Msa0810930:CDS |
TCTTGAGTAGAACCACAAAA+TGG | 0.289207 | 5_3:+39878474 | None:intergenic |
TCCATGGACCATGTAATTCT+AGG | 0.298952 | 5_3:+39876393 | None:intergenic |
TACCACCACCATCAAAATTT+AGG | 0.302751 | 5_3:-39879355 | Msa0810930:CDS |
TTAATATGCTCTTCACTTAC+TGG | 0.302787 | 5_3:-39872318 | Msa0810930:three_prime_UTR |
CATACCTTGCACAGCTTCAT+AGG | 0.304708 | 5_3:+39877282 | None:intergenic |
TCCATTTGTATATTCTTGTT+TGG | 0.307399 | 5_3:-39874593 | Msa0810930:CDS |
TCACAGATGCAACAACTTCT+AGG | 0.308271 | 5_3:-39872579 | Msa0810930:CDS |
ATTCAGAGGTTGGTTCTATT+AGG | 0.312085 | 5_3:-39879783 | Msa0810930:five_prime_UTR |
TTCACCATTAGCTCCTCTTC+TGG | 0.318680 | 5_3:+39877751 | None:intergenic |
TAGGTTTAAGGTTTCAAAAT+TGG | 0.319415 | 5_3:-39879818 | Msa0810930:five_prime_UTR |
AAACCCTGTGCATAAATCTT+AGG | 0.320391 | 5_3:-39875305 | Msa0810930:CDS |
GCATCCACTCCACCTTTGAT+AGG | 0.324289 | 5_3:+39874627 | None:intergenic |
TGCCATCTGTCGAGGTTATT+GGG | 0.326097 | 5_3:-39873039 | Msa0810930:CDS |
CAGAAACTGGTTTGGGCCTC+AGG | 0.332585 | 5_3:+39875552 | None:intergenic |
ATAAAATAACTTACAACATA+TGG | 0.335183 | 5_3:+39876991 | None:intergenic |
TTATGGTGGAAGGTATTCTT+TGG | 0.335278 | 5_3:-39879228 | Msa0810930:CDS |
TCTAGAACCAAGGTATATTC+TGG | 0.337993 | 5_3:+39874282 | None:intergenic |
ATGATAATCAATCAATCATA+TGG | 0.346525 | 5_3:-39872395 | Msa0810930:three_prime_UTR |
ATGAAAAGTGGCGGCGGTAG+AGG | 0.346916 | 5_3:-39879386 | Msa0810930:CDS |
CAGTTTCTGTCACTACTTCC+AGG | 0.351135 | 5_3:-39875538 | Msa0810930:intron |
AGAAGTTGCAATGAAAGTTC+AGG | 0.359320 | 5_3:-39876432 | Msa0810930:CDS |
AATGGTGCTGCTAAGAGATA+TGG | 0.361058 | 5_3:-39879176 | Msa0810930:CDS |
AAATCATCTCCAAGACTATC+TGG | 0.365820 | 5_3:+39876898 | None:intergenic |
GAGAATAGATCATGGTATAA+AGG | 0.367349 | 5_3:-39872870 | Msa0810930:CDS |
GCAAAGCTCTGTGCTGTATA+TGG | 0.367805 | 5_3:+39874883 | None:intergenic |
TGAAAGATCTCTTTGAAAAT+CGG | 0.369680 | 5_3:+39874781 | None:intergenic |
AAGGCGAGGTGGTTGTGAAT+TGG | 0.379609 | 5_3:+39878121 | None:intergenic |
GCATGGCACCTAAGAAATTT+GGG | 0.379782 | 5_3:-39873996 | Msa0810930:CDS |
AAACTGTTGTCCTTGTGATT+AGG | 0.380356 | 5_3:+39872480 | None:intergenic |
GCAAAGATAGACGTTTATCT+TGG | 0.381941 | 5_3:+39874568 | None:intergenic |
TTGCAGTCAAAACTATCTTC+TGG | 0.383266 | 5_3:-39877466 | Msa0810930:CDS |
GCGTCTTTGCCTTCACGCTT+GGG | 0.385460 | 5_3:-39877945 | Msa0810930:CDS |
TGTGTCAGGGAACCATTTGC+AGG | 0.387579 | 5_3:+39877403 | None:intergenic |
GGTGCTGTGTTTCCAGCATT+TGG | 0.390436 | 5_3:+39873733 | None:intergenic |
TATCTGTTCAATTTCGTCCT+TGG | 0.391761 | 5_3:+39875722 | None:intergenic |
TTGAACTGTGATTCAATCCT+TGG | 0.396509 | 5_3:+39873775 | None:intergenic |
CTTGATGAGTCATCTTTCTC+TGG | 0.397406 | 5_3:-39875669 | Msa0810930:CDS |
AAAGTTCAGGAACTACTTGC+AGG | 0.398147 | 5_3:-39873671 | Msa0810930:CDS |
CAAGGCAGGAGCTGCATGAC+TGG | 0.398224 | 5_3:+39875620 | None:intergenic |
GAATAATGAAAGCTGTTTGA+TGG | 0.399448 | 5_3:-39875364 | Msa0810930:CDS |
CTGGAAGTAGTGACAGAAAC+TGG | 0.403028 | 5_3:+39875539 | None:intergenic |
CTTTGAACATTCATCCTTGA+AGG | 0.404054 | 5_3:+39878879 | None:intergenic |
CTTTACTTAGAGATGCATTT+GGG | 0.409059 | 5_3:-39877877 | Msa0810930:intron |
TCGTCCAGAGAAACACTTAC+TGG | 0.409705 | 5_3:-39879092 | Msa0810930:CDS |
TGTGAATCAGAAACCGTAAT+GGG | 0.415519 | 5_3:+39879966 | None:intergenic |
TAGCGGTTCAAATAGTGATA+TGG | 0.420595 | 5_3:-39879279 | Msa0810930:CDS |
TATCTCTTAGCAGCACCATT+GGG | 0.421520 | 5_3:+39879179 | None:intergenic |
TAGTTGAAGAAGACGCCATT+AGG | 0.423070 | 5_3:-39877037 | Msa0810930:CDS |
TAAATAAAGAGGGTTATTAA+GGG | 0.426330 | 5_3:-39872427 | Msa0810930:three_prime_UTR |
TATGGACGCCAGCGTTGATT+CGG | 0.426775 | 5_3:-39879261 | Msa0810930:CDS |
CGCTTGGGCGATGCAGTGTA+TGG | 0.427505 | 5_3:-39877930 | Msa0810930:CDS |
GGCACGCTCTTAGGAAAGTT+CGG | 0.428629 | 5_3:-39877441 | Msa0810930:CDS |
AATTACATGGTCCATGGAAA+TGG | 0.428646 | 5_3:-39876388 | Msa0810930:CDS |
TTAGCAGCACTCCTCATTAC+CGG | 0.429720 | 5_3:+39879047 | None:intergenic |
TCTTCCAGTAAGTGTTTCTC+TGG | 0.430514 | 5_3:+39879088 | None:intergenic |
TCTTTACTTAGAGATGCATT+TGG | 0.430566 | 5_3:-39877878 | Msa0810930:CDS |
AATACTGTGAAGATAGCTTA+TGG | 0.431220 | 5_3:+39873082 | None:intergenic |
GTACTTTGAAATCTGTATCC+AGG | 0.431525 | 5_3:-39878383 | Msa0810930:CDS |
CTTGAGTAGAACCACAAAAT+GGG | 0.433325 | 5_3:+39878475 | None:intergenic |
GATGTCGAGCATCCTCTTCA+AGG | 0.434680 | 5_3:+39873804 | None:intergenic |
TGCAGCTCCTGCCTTGGAAC+CGG | 0.440849 | 5_3:-39875613 | Msa0810930:CDS |
TGTTATTCATTGTAATACTT+TGG | 0.442744 | 5_3:-39872254 | Msa0810930:three_prime_UTR |
GGCTGCTATCGCTGATAATC+CGG | 0.442816 | 5_3:-39876818 | Msa0810930:intron |
CATTCCTAAGATTTATGCAC+AGG | 0.442823 | 5_3:+39875301 | None:intergenic |
GTGGGGCTCGACCCTCCTAC+TGG | 0.443564 | 5_3:-39877556 | Msa0810930:CDS |
TGATGCTGAGAGCAAAGTTC+AGG | 0.447811 | 5_3:-39873684 | Msa0810930:CDS |
TGCTAATAAGTTACCTGTCT+CGG | 0.449263 | 5_3:-39879318 | Msa0810930:CDS |
TGTTCAAAGTTCTGCAGAAA+AGG | 0.451148 | 5_3:-39878865 | Msa0810930:intron |
AGATCTCGTGATCCGATTAG+TGG | 0.452469 | 5_3:-39879410 | Msa0810930:CDS |
GTACCACATTTGCCTGCAAA+TGG | 0.452983 | 5_3:-39877415 | Msa0810930:CDS |
TCAAATCTCGAACCCCATTA+CGG | 0.453669 | 5_3:-39879979 | Msa0810930:five_prime_UTR |
GAACTACTTGCAGGCTATTG+TGG | 0.456163 | 5_3:-39873662 | Msa0810930:CDS |
CTCTCTAAGCTTAATATCAA+AGG | 0.459245 | 5_3:-39880046 | Msa0810930:five_prime_UTR |
TTAACAGCCGGTTCCAAGGC+AGG | 0.459389 | 5_3:+39875606 | None:intergenic |
ATTCATTGTAATACTTTGGT+AGG | 0.459523 | 5_3:-39872250 | Msa0810930:three_prime_UTR |
CAGAACTGCTACTGGTTCAG+AGG | 0.460004 | 5_3:-39878156 | Msa0810930:CDS |
GGATCCAGGCTGCAACCTAA+TGG | 0.460520 | 5_3:+39877022 | None:intergenic |
AACAGCAGATTGCCTTAACT+TGG | 0.461204 | 5_3:-39876167 | Msa0810930:CDS |
TTGCTCAGATGCCACGGTCT+CGG | 0.463158 | 5_3:-39879148 | Msa0810930:CDS |
ATATCTCTTAGCAGCACCAT+TGG | 0.463834 | 5_3:+39879178 | None:intergenic |
CGAACCTCCATGATGCATCT+AGG | 0.464652 | 5_3:+39872525 | None:intergenic |
GCAGATTATATACCAAGTTA+AGG | 0.465872 | 5_3:+39876155 | None:intergenic |
AGTAGTGACAGAAACTGGTT+TGG | 0.467102 | 5_3:+39875544 | None:intergenic |
AGCAGGGCTTATATGTCAGC+AGG | 0.469725 | 5_3:-39878918 | Msa0810930:CDS |
AGATGACAATAGTCATCTTA+AGG | 0.472987 | 5_3:-39876611 | Msa0810930:intron |
CGCTATATACAACAAGTCTC+TGG | 0.473262 | 5_3:-39877349 | Msa0810930:CDS |
GAACCAGACCATGAGCTTGT+TGG | 0.474020 | 5_3:-39876670 | Msa0810930:CDS |
GGTGCCATGCTATCTTTAAG+AGG | 0.479202 | 5_3:+39874009 | None:intergenic |
GATCATGGTATAAAGGTTCA+AGG | 0.479291 | 5_3:-39872863 | Msa0810930:CDS |
GTAATGAGGAGTGCTGCTAA+TGG | 0.479572 | 5_3:-39879044 | Msa0810930:CDS |
ATAATCAAAATATACTTCCT+AGG | 0.479944 | 5_3:-39875254 | Msa0810930:intron |
GCTTCTTGCTTACCAAATGC+TGG | 0.480620 | 5_3:-39873745 | Msa0810930:CDS |
TTGAATCACAGTTCAAATCA+TGG | 0.480727 | 5_3:-39873768 | Msa0810930:CDS |
TATATGGAAGCAGAAAGATT+TGG | 0.484202 | 5_3:+39874899 | None:intergenic |
AGTGGCGGCGGTAGAGGGTG+TGG | 0.484699 | 5_3:-39879380 | Msa0810930:CDS |
TCCAAACAAGAATATACAAA+TGG | 0.484801 | 5_3:+39874592 | None:intergenic |
TTACAACATATGGACTTCAC+TGG | 0.488136 | 5_3:+39877001 | None:intergenic |
TCTTATCAGAATCGACTACT+AGG | 0.490024 | 5_3:-39875750 | Msa0810930:intron |
TCTCTAAGCTTAATATCAAA+GGG | 0.490643 | 5_3:-39880045 | Msa0810930:five_prime_UTR |
CAGTCATGCAGCTCCTGCCT+TGG | 0.491978 | 5_3:-39875619 | Msa0810930:CDS |
CAAGCTCATGGTCTGGTTCA+CGG | 0.492655 | 5_3:+39876674 | None:intergenic |
TAAATTCAACCCACCTCCTC+AGG | 0.493294 | 5_3:+39873922 | None:intergenic |
GTACTACGTGTTGCAGAAGT+TGG | 0.493392 | 5_3:+39878426 | None:intergenic |
ATAGGCACATGTAGACCGTT+TGG | 0.494429 | 5_3:+39873951 | None:intergenic |
GTTTACTTGCTTAATCAGAA+AGG | 0.494637 | 5_3:+39880018 | None:intergenic |
GAAGTTGCAATGAAAGTTCA+GGG | 0.494648 | 5_3:-39876431 | Msa0810930:CDS |
ATTAAGTTACCTGTCCCATT+CGG | 0.494879 | 5_3:+39873015 | None:intergenic |
CTCATAGCTGTGTTTGAGAA+TGG | 0.497727 | 5_3:+39879431 | None:intergenic |
TTCAAAGAGATCTTTCAGGC+TGG | 0.497753 | 5_3:-39874775 | Msa0810930:CDS |
ACGCCCAAAATGCTTTCCCT+TGG | 0.498791 | 5_3:+39876855 | None:intergenic |
AGCATATTAATCTTGTTCCT+AGG | 0.501315 | 5_3:+39872331 | None:intergenic |
ATGCTTCTAGTGTACCTTCA+AGG | 0.501694 | 5_3:-39878893 | Msa0810930:CDS |
TCAACCAGAAGAGGAGCTAA+TGG | 0.506702 | 5_3:-39877755 | Msa0810930:CDS |
ACAAGGAATGACGAGGGATC+CGG | 0.506996 | 5_3:-39879066 | Msa0810930:CDS |
GGAGCTGCATGACTGGATGC+TGG | 0.507579 | 5_3:+39875627 | None:intergenic |
CTTCTTAGTCCTATCAAAGG+TGG | 0.511888 | 5_3:-39874636 | Msa0810930:intron |
TTGCCAACAAGCTCATGGTC+TGG | 0.512703 | 5_3:+39876667 | None:intergenic |
ATATGGACTTCACTGGATCC+AGG | 0.515067 | 5_3:+39877008 | None:intergenic |
GAAGATTCTTCAAGATTCAA+AGG | 0.515408 | 5_3:-39873168 | Msa0810930:CDS |
CTCATATCTTGTCCACCGAC+AGG | 0.515457 | 5_3:-39874842 | Msa0810930:CDS |
AGTTCTGCTACTGGTGATGA+TGG | 0.517116 | 5_3:+39874818 | None:intergenic |
CGAGGTTATTGGGACCGAAT+GGG | 0.517152 | 5_3:-39873029 | Msa0810930:CDS |
AAGTTGGTGTAACAACTTTG+CGG | 0.517995 | 5_3:-39877318 | Msa0810930:CDS |
TCGGAAGAGGAAGTTTATGG+TGG | 0.518785 | 5_3:-39879242 | Msa0810930:CDS |
GCAGTACGCAAAGTCAAAGT+GGG | 0.519161 | 5_3:-39877574 | Msa0810930:intron |
TGATACCTTGCATGAAATGT+TGG | 0.522674 | 5_3:+39878098 | None:intergenic |
CAATACACATGTAAATAAAG+AGG | 0.523131 | 5_3:-39872438 | Msa0810930:three_prime_UTR |
TGAATCACAGTTCAAATCAT+GGG | 0.525286 | 5_3:-39873767 | Msa0810930:CDS |
TTGGGGACTCTGTTGTCTTG+TGG | 0.525829 | 5_3:+39879197 | None:intergenic |
AAAACTTATTGGCAAGATGA+AGG | 0.526439 | 5_3:-39877683 | Msa0810930:CDS |
ATGGTTCTCTAACTTATCCC+TGG | 0.527134 | 5_3:+39878365 | None:intergenic |
CATTGAAGTTCAAGATTCCA+AGG | 0.529687 | 5_3:-39876872 | Msa0810930:CDS |
TCGAGGTTATTGGGACCGAA+TGG | 0.530623 | 5_3:-39873030 | Msa0810930:CDS |
TATATTCATCTGTGTCAGAA+AGG | 0.531164 | 5_3:+39875394 | None:intergenic |
GTGAAGGCAAAGACGCGCAC+AGG | 0.531948 | 5_3:+39877952 | None:intergenic |
GTCTCTGGACTCCTAAAAGT+TGG | 0.532031 | 5_3:-39877334 | Msa0810930:CDS |
TGCGTTCACAGAACTGCTAC+TGG | 0.533287 | 5_3:-39878164 | Msa0810930:intron |
TAAGCAACTCAACTGCTCCT+AGG | 0.533539 | 5_3:-39872348 | Msa0810930:three_prime_UTR |
GCTTGCACCTGTTATCATGA+AGG | 0.534068 | 5_3:-39876134 | Msa0810930:CDS |
TTTCCGAGCTTGCATCTCCA+TGG | 0.536492 | 5_3:+39878346 | None:intergenic |
AGCTTGTAAAGTTTAACAGC+CGG | 0.536736 | 5_3:+39875594 | None:intergenic |
ACCTAGAATTACATGGTCCA+TGG | 0.537176 | 5_3:-39876394 | Msa0810930:CDS |
AAGTTCAGGGCTTTCAGCAA+AGG | 0.539878 | 5_3:-39876418 | Msa0810930:CDS |
CGCCAGCGTTGATTCGGAAG+AGG | 0.540156 | 5_3:-39879255 | Msa0810930:CDS |
GAGACAGGTAACTTATTAGC+AGG | 0.540938 | 5_3:+39879320 | None:intergenic |
GACGCCATTAGGTTGCAGCC+TGG | 0.541548 | 5_3:-39877026 | Msa0810930:CDS |
CTAGCTAACTGCTCTTTCAG+TGG | 0.542632 | 5_3:+39873107 | None:intergenic |
AAGTTTAACAGCCGGTTCCA+AGG | 0.542939 | 5_3:+39875602 | None:intergenic |
GCTGCTAATGGAAGGCAGAA+TGG | 0.544705 | 5_3:-39879032 | Msa0810930:CDS |
CTGTCGGTGGACAAGATATG+AGG | 0.545131 | 5_3:+39874843 | None:intergenic |
GCGAGGTGGTTGTGAATTGG+AGG | 0.545388 | 5_3:+39878124 | None:intergenic |
TATCAGCGATAGCAGCCACT+TGG | 0.545567 | 5_3:+39876824 | None:intergenic |
GTAGTGACAGAAACTGGTTT+GGG | 0.545700 | 5_3:+39875545 | None:intergenic |
TAATATGCTCTTCACTTACT+GGG | 0.545823 | 5_3:-39872317 | Msa0810930:three_prime_UTR |
GCCTTCCAACATTTCATGCA+AGG | 0.546520 | 5_3:-39878103 | Msa0810930:intron |
CCGCTGGCCAGAATATACCT+TGG | 0.546895 | 5_3:-39874289 | Msa0810930:CDS |
TACTTTGAAATCTGTATCCA+GGG | 0.547378 | 5_3:-39878382 | Msa0810930:CDS |
TTATTGGGACCGAATGGGAC+AGG | 0.547657 | 5_3:-39873024 | Msa0810930:intron |
ATGACTATTGTCATCTGCAC+TGG | 0.548196 | 5_3:+39876618 | None:intergenic |
ATGGTGCTGCTAAGAGATAT+GGG | 0.549903 | 5_3:-39879175 | Msa0810930:CDS |
TAGATATCTATCGTATGTCA+TGG | 0.550386 | 5_3:-39876203 | Msa0810930:CDS |
GTGTGAATCAGAAACCGTAA+TGG | 0.552337 | 5_3:+39879965 | None:intergenic |
TGATAATCAATCAATCATAT+GGG | 0.552944 | 5_3:-39872394 | Msa0810930:three_prime_UTR |
TTCCTTCTTAGTCCTATCAA+AGG | 0.554631 | 5_3:-39874639 | Msa0810930:intron |
AGCTCCTCTTAAAGATAGCA+TGG | 0.555560 | 5_3:-39874013 | Msa0810930:CDS |
TGATACCTCTTGGTGGCTCA+AGG | 0.555917 | 5_3:+39876096 | None:intergenic |
TTCCCTGACACATAAAAGCT+TGG | 0.559129 | 5_3:-39877392 | Msa0810930:CDS |
ACAGAAAAGAGAATAGATCA+TGG | 0.559892 | 5_3:-39872878 | Msa0810930:CDS |
TCATGATATCTTATCTCCTG+AGG | 0.562589 | 5_3:-39875568 | Msa0810930:CDS |
CAAGTAGGGAGTAGTATCAA+TGG | 0.563189 | 5_3:-39878954 | Msa0810930:CDS |
GTTTCTGATTCACACTTCTG+TGG | 0.564909 | 5_3:-39879957 | Msa0810930:five_prime_UTR |
CTTGCACCTGTTATCATGAA+GGG | 0.565811 | 5_3:-39876133 | Msa0810930:CDS |
GAACCATTTGCAGGCAAATG+TGG | 0.565898 | 5_3:+39877412 | None:intergenic |
GAGCTAATGGTGAAATGCAA+TGG | 0.566880 | 5_3:-39877742 | Msa0810930:CDS |
GGATGATTCGTCGGATTCTG+CGG | 0.568196 | 5_3:-39879000 | Msa0810930:CDS |
ACGGTCTACATGTGCCTATG+TGG | 0.568735 | 5_3:-39873947 | Msa0810930:CDS |
ATGTCCAGAAACTTGCCAAA+CGG | 0.569380 | 5_3:-39873966 | Msa0810930:CDS |
TCATACATGTCATCAACAAA+GGG | 0.569455 | 5_3:+39874354 | None:intergenic |
CCGATTAGTGGAATGAAAAG+TGG | 0.570072 | 5_3:-39879398 | Msa0810930:CDS |
TGACGAGGGATCCGGTAATG+AGG | 0.570148 | 5_3:-39879058 | Msa0810930:CDS |
GTATCTTGCCAACAAGCTCA+TGG | 0.570307 | 5_3:+39876662 | None:intergenic |
CTCATACATGTCATCAACAA+AGG | 0.571246 | 5_3:+39874353 | None:intergenic |
AAGAGGAAGTTTATGGTGGA+AGG | 0.571425 | 5_3:-39879238 | Msa0810930:CDS |
GCAATGACAAGTTCTGCTAC+TGG | 0.573441 | 5_3:+39874809 | None:intergenic |
TTTCACTGAGGATGATTCGT+CGG | 0.574054 | 5_3:-39879009 | Msa0810930:CDS |
TGCCTATGTGGTTCCTGAGG+AGG | 0.575224 | 5_3:-39873935 | Msa0810930:intron |
CAAAGGAACCTAGAATTACA+TGG | 0.575331 | 5_3:-39876401 | Msa0810930:CDS |
GACATGCTACATCCAGTAGG+AGG | 0.575791 | 5_3:+39877544 | None:intergenic |
TCTGTCAAGAGCCATTTCCA+TGG | 0.578372 | 5_3:+39876377 | None:intergenic |
TGAAAAGTGGCGGCGGTAGA+GGG | 0.579262 | 5_3:-39879385 | Msa0810930:CDS |
GGAAACATTGACAGACTATG+AGG | 0.579854 | 5_3:-39874322 | Msa0810930:CDS |
ATGAGGTCATCATTTGCCGC+TGG | 0.580095 | 5_3:-39874305 | Msa0810930:CDS |
TGCAGTACGCAAAGTCAAAG+TGG | 0.581751 | 5_3:-39877575 | Msa0810930:intron |
GAACCATGGAGATGCAAGCT+CGG | 0.582420 | 5_3:-39878349 | Msa0810930:CDS |
TTGACTGCAAATTTGAGAAG+TGG | 0.583581 | 5_3:+39877479 | None:intergenic |
ATCTTTCTCTGGAATCGTCG+AGG | 0.584965 | 5_3:-39875658 | Msa0810930:CDS |
AATACACATGTAAATAAAGA+GGG | 0.585161 | 5_3:-39872437 | Msa0810930:three_prime_UTR |
AGTCAAAACTATCTTCTGGT+TGG | 0.585669 | 5_3:-39877462 | Msa0810930:CDS |
TGATATTGAGAAGGCGATTG+TGG | 0.585814 | 5_3:-39874067 | Msa0810930:CDS |
GTCCCAATAACCTCGACAGA+TGG | 0.586762 | 5_3:+39873037 | None:intergenic |
GGAGGCACCTAGATGCATCA+TGG | 0.587292 | 5_3:-39872532 | Msa0810930:CDS |
TCCTCCTATGAAGCTGTGCA+AGG | 0.588239 | 5_3:-39877286 | Msa0810930:intron |
TGCTCGACATCTTACGTCCA+AGG | 0.589561 | 5_3:-39873792 | Msa0810930:CDS |
AGTGCTTCTTCAACCAGAAG+AGG | 0.591826 | 5_3:-39877764 | Msa0810930:CDS |
TGGAAGCAGAAAGATTTGGC+AGG | 0.594188 | 5_3:+39874903 | None:intergenic |
TTCCTCTTCCGAATCAACGC+TGG | 0.594375 | 5_3:+39879253 | None:intergenic |
TGAGGAGTGCTGCTAATGGA+AGG | 0.594622 | 5_3:-39879040 | Msa0810930:CDS |
AAGTTAAGGCAATCTGCTGT+TGG | 0.596013 | 5_3:+39876169 | None:intergenic |
CAATGGAGAACTTTCTAGTG+AGG | 0.596450 | 5_3:-39877725 | Msa0810930:CDS |
AAATAAAGAGGGTTATTAAG+GGG | 0.598297 | 5_3:-39872426 | Msa0810930:three_prime_UTR |
TCATTGCAACTTCTAGAACC+AGG | 0.599580 | 5_3:+39876441 | None:intergenic |
TAGTCCTATCAAAGGTGGAG+TGG | 0.600358 | 5_3:-39874631 | Msa0810930:CDS |
CTTCTGGTAAGCGGTAGACA+TGG | 0.603040 | 5_3:+39875332 | None:intergenic |
TTGAGTAGAACCACAAAATG+GGG | 0.603689 | 5_3:+39878476 | None:intergenic |
AATGCTGGAAACACAGCACC+TGG | 0.603796 | 5_3:-39873730 | Msa0810930:CDS |
GATACTACTCCCTACTTGTG+TGG | 0.604286 | 5_3:+39878959 | None:intergenic |
GGCAATAGCTGATATTGAGA+AGG | 0.610931 | 5_3:-39874076 | Msa0810930:CDS |
GGAATGTTGCTCAGATGCCA+CGG | 0.611258 | 5_3:-39879154 | Msa0810930:CDS |
ACCTTGCACAGCTTCATAGG+AGG | 0.612295 | 5_3:+39877285 | None:intergenic |
CTGGAAGACAAGGAATGACG+AGG | 0.612503 | 5_3:-39879073 | Msa0810930:CDS |
ATCATGGTATAAAGGTTCAA+GGG | 0.614850 | 5_3:-39872862 | Msa0810930:CDS |
ATGTCGATGATACCTCTTGG+TGG | 0.614897 | 5_3:+39876089 | None:intergenic |
AGCTTTAGATAAACAGTATG+CGG | 0.619900 | 5_3:-39874043 | Msa0810930:CDS |
ACTGCATCGCCCAAGCGTGA+AGG | 0.619920 | 5_3:+39877936 | None:intergenic |
GGCTATTGTGGAGAAACTCG+TGG | 0.621189 | 5_3:-39873650 | Msa0810930:CDS |
ATGTGCCTATGTGGTTCCTG+AGG | 0.623485 | 5_3:-39873938 | Msa0810930:CDS |
CACCTCCTCAGGAACCACAT+AGG | 0.624978 | 5_3:+39873933 | None:intergenic |
CGCACTTAGATGGGTCAGAG+AGG | 0.625042 | 5_3:-39879730 | Msa0810930:intron |
ATTGAAGTTCAAGATTCCAA+GGG | 0.625316 | 5_3:-39876871 | Msa0810930:CDS |
ATTCCTAAGATTTATGCACA+GGG | 0.625437 | 5_3:+39875302 | None:intergenic |
TTAGGTAAGATGTTCACTGA+AGG | 0.629124 | 5_3:-39879765 | Msa0810930:exon |
AATGGAGAACTTTCTAGTGA+GGG | 0.631445 | 5_3:-39877724 | Msa0810930:CDS |
GAAACACTTACTGGAAGACA+AGG | 0.633456 | 5_3:-39879083 | Msa0810930:CDS |
GAACTTTGCTCTCAGCATCA+CGG | 0.635566 | 5_3:+39873687 | None:intergenic |
AGTGGAATGAAAAGTGGCGG+CGG | 0.636709 | 5_3:-39879392 | Msa0810930:CDS |
TCAAGATTCAAAGGAAACAG+TGG | 0.637389 | 5_3:-39873159 | Msa0810930:CDS |
ATCTCTTAGCAGCACCATTG+GGG | 0.638124 | 5_3:+39879180 | None:intergenic |
AGGGATAAGTTAGAGAACCA+TGG | 0.640988 | 5_3:-39878363 | Msa0810930:CDS |
CTGAGATTTATACGAAGCTG+AGG | 0.642228 | 5_3:-39876331 | Msa0810930:intron |
CGAGTCGTGCAAATTAGACA+AGG | 0.642662 | 5_3:-39874544 | Msa0810930:intron |
AGAACTGCTACTGGTTCAGA+GGG | 0.643693 | 5_3:-39878155 | Msa0810930:CDS |
ACTGGTGATGATGGACCTGT+CGG | 0.643984 | 5_3:+39874827 | None:intergenic |
TGCGATACAAGAGAAAGACA+TGG | 0.645035 | 5_3:-39872553 | Msa0810930:CDS |
TCGACTACTAGGAGAGACCA+AGG | 0.647615 | 5_3:-39875739 | Msa0810930:CDS |
GATGACATGCTACATCCAGT+AGG | 0.652898 | 5_3:+39877541 | None:intergenic |
GCATGAAATGTTGGAAGGCG+AGG | 0.653114 | 5_3:+39878107 | None:intergenic |
GGAGACAGTTGCATATGACC+TGG | 0.654916 | 5_3:-39876459 | Msa0810930:CDS |
AGTCTGACAAAGTACGCTGG+TGG | 0.654966 | 5_3:-39876705 | Msa0810930:CDS |
TAAGCGGTAGACATGGTCAA+AGG | 0.655113 | 5_3:+39875339 | None:intergenic |
AACTTCCTTGAGCCACCAAG+AGG | 0.658392 | 5_3:-39876101 | Msa0810930:intron |
GGTGATGATGGACCTGTCGG+TGG | 0.659135 | 5_3:+39874830 | None:intergenic |
TAGAAGTTGTTGCATCTGTG+AGG | 0.659849 | 5_3:+39872581 | None:intergenic |
TAAAGACGCTCCTAATCACA+AGG | 0.660476 | 5_3:-39872490 | Msa0810930:CDS |
TGGAAGGTTATCTGATGACG+AGG | 0.662168 | 5_3:-39878520 | Msa0810930:CDS |
ATTGGCAAGATGAAGGTGCA+AGG | 0.662707 | 5_3:-39877676 | Msa0810930:intron |
TGACATGTATGAGCGGCTGA+AGG | 0.662731 | 5_3:-39874343 | Msa0810930:CDS |
ACCTTGCATGAAATGTTGGA+AGG | 0.664073 | 5_3:+39878102 | None:intergenic |
CGGTGGACAAGATATGAGGA+AGG | 0.664141 | 5_3:+39874847 | None:intergenic |
AAGGCAATCTGCTGTTGGTG+TGG | 0.664226 | 5_3:+39876174 | None:intergenic |
ACATGCTACATCCAGTAGGA+GGG | 0.666417 | 5_3:+39877545 | None:intergenic |
CAGTACGCAAAGTCAAAGTG+GGG | 0.672704 | 5_3:-39877573 | Msa0810930:CDS |
TGGGCGTGTTCTTGTCCAAG+TGG | 0.675367 | 5_3:-39876839 | Msa0810930:CDS |
CCAAGGTATATTCTGGCCAG+CGG | 0.676002 | 5_3:+39874289 | None:intergenic |
ATTAGTGGAATGAAAAGTGG+CGG | 0.676114 | 5_3:-39879395 | Msa0810930:CDS |
AACAGTCTGACAAAGTACGC+TGG | 0.679236 | 5_3:-39876708 | Msa0810930:intron |
TGGAAGACAAGGAATGACGA+GGG | 0.680604 | 5_3:-39879072 | Msa0810930:CDS |
GTGAATCAGAAACCGTAATG+GGG | 0.680830 | 5_3:+39879967 | None:intergenic |
GTTGCAGTGTGGTTCTGTAG+CGG | 0.681208 | 5_3:-39876480 | Msa0810930:intron |
TATGCAATTACTGCATACCA+TGG | 0.685741 | 5_3:+39877980 | None:intergenic |
GCAGGGCTTATATGTCAGCA+GGG | 0.687674 | 5_3:-39878917 | Msa0810930:CDS |
GCGGTTGAGACATTCGATAG+CGG | 0.689985 | 5_3:-39879296 | Msa0810930:CDS |
CCACCATCAAAATTTAGGAG+TGG | 0.694173 | 5_3:-39879350 | Msa0810930:CDS |
CAAGACAACAGAGTCCCCAA+TGG | 0.694596 | 5_3:-39879194 | Msa0810930:CDS |
ATGGTATAAAGGTTCAAGGG+TGG | 0.698357 | 5_3:-39872859 | Msa0810930:CDS |
TTGTTGATGACATGTATGAG+CGG | 0.713232 | 5_3:-39874350 | Msa0810930:CDS |
TGAAATGTTGGAAGGCGAGG+TGG | 0.713600 | 5_3:+39878110 | None:intergenic |
TGAGTAGAACCACAAAATGG+GGG | 0.718280 | 5_3:+39878477 | None:intergenic |
TCACTCGCATACCGAGACCG+TGG | 0.723475 | 5_3:+39879137 | None:intergenic |
GGCACCTAGATGCATCATGG+AGG | 0.732994 | 5_3:-39872529 | Msa0810930:CDS |
TAATAAGTTACCTGTCTCGG+CGG | 0.736229 | 5_3:-39879315 | Msa0810930:CDS |
AGAGATAAGACAAACTAACG+AGG | 0.762301 | 5_3:-39878454 | Msa0810930:CDS |
GATACAAGAGAAAGACATGG+AGG | 0.786579 | 5_3:-39872550 | Msa0810930:CDS |
AAGGCAGAATGGTTTCACTG+AGG | 0.797068 | 5_3:-39879021 | Msa0810930:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTGTATGAAAAATTATT+GGG | + | chr5_3:39873425-39873444 | None:intergenic | 10.0% |
!!! | AATTTTGTATGAAAAATTAT+TGG | + | chr5_3:39873426-39873445 | None:intergenic | 10.0% |
!! | TATTATTACAATTTACTAAT+TGG | - | chr5_3:39876768-39876787 | Msa0810930:intron | 10.0% |
!! | GATTATATAAATACTTAAAT+TGG | + | chr5_3:39877179-39877198 | None:intergenic | 10.0% |
!!! | ATACAAAATTTTCTCAATTT+TGG | - | chr5_3:39873436-39873455 | Msa0810930:intron | 15.0% |
!! | AAACTTATACAATTGAAAAA+TGG | + | chr5_3:39875118-39875137 | None:intergenic | 15.0% |
!! | ATAAAATAACTTACAACATA+TGG | + | chr5_3:39875266-39875285 | None:intergenic | 15.0% |
!! | AAATGCAATAAAAATATTAC+CGG | + | chr5_3:39875458-39875477 | None:intergenic | 15.0% |
!! | AGACAATAAAATGATATATT+AGG | + | chr5_3:39875749-39875768 | None:intergenic | 15.0% |
!! | TAATAAATTAATATTTCAGC+AGG | + | chr5_3:39875973-39875992 | None:intergenic | 15.0% |
!!! | CTTTAAAAATATAATGAAAG+TGG | + | chr5_3:39876233-39876252 | None:intergenic | 15.0% |
!!! | ATTTTTTGTCTTATCTAATA+CGG | - | chr5_3:39876468-39876487 | Msa0810930:CDS | 15.0% |
!!! | ACTCTTTTTCTATATTATAA+TGG | - | chr5_3:39877734-39877753 | Msa0810930:CDS | 15.0% |
!!! | CTCTTTTTCTATATTATAAT+GGG | - | chr5_3:39877735-39877754 | Msa0810930:CDS | 15.0% |
!!! | AAAAAAAAAAGATCTTCTTT+TGG | - | chr5_3:39878362-39878381 | Msa0810930:CDS | 15.0% |
!!! | TTATATATTTCTTATTTGAC+AGG | - | chr5_3:39879332-39879351 | Msa0810930:CDS | 15.0% |
!!! | AATATATAGTTTTACTAGAT+TGG | - | chr5_3:39880027-39880046 | Msa0810930:five_prime_UTR | 15.0% |
!!! | TAATTTATTCTTCATTTTGA+TGG | - | chr5_3:39880088-39880107 | Msa0810930:five_prime_UTR | 15.0% |
!! | TTGCATAAAACATGAAAAAA+CGG | + | chr5_3:39872569-39872588 | None:intergenic | 20.0% |
!!! | TTTTTCATGTTTTATGCAAA+TGG | - | chr5_3:39872570-39872589 | Msa0810930:CDS | 20.0% |
!!! | TTTTCATGTTTTATGCAAAT+GGG | - | chr5_3:39872571-39872590 | Msa0810930:CDS | 20.0% |
!!! | ATATACCAATGTAGTTATTT+TGG | + | chr5_3:39872740-39872759 | None:intergenic | 20.0% |
!! | TATATTAGCATATATGCTTA+AGG | + | chr5_3:39874224-39874243 | None:intergenic | 20.0% |
!! | AGTGACACATAAAATTAAAA+TGG | - | chr5_3:39874739-39874758 | Msa0810930:intron | 20.0% |
!!! | ATATCATTTTATTGTCTTTG+TGG | - | chr5_3:39875752-39875771 | Msa0810930:intron | 20.0% |
!! | TAAAAATCGTATGTTGTATA+TGG | + | chr5_3:39876417-39876436 | None:intergenic | 20.0% |
!! | TTAACAACTAATATTATCTC+AGG | - | chr5_3:39876809-39876828 | Msa0810930:intron | 20.0% |
!! | ATAATCAAAATATACTTCCT+AGG | - | chr5_3:39877000-39877019 | Msa0810930:intron | 20.0% |
!!! | TTTCTTTTCTCAAACATATA+AGG | - | chr5_3:39877027-39877046 | Msa0810930:CDS | 20.0% |
!!! | TATTGTTAATGGTTCTAATA+TGG | - | chr5_3:39877297-39877316 | Msa0810930:CDS | 20.0% |
!! | ATTCTTCGATTACATAATTA+GGG | + | chr5_3:39877556-39877575 | None:intergenic | 20.0% |
!! | AATTCTTCGATTACATAATT+AGG | + | chr5_3:39877557-39877576 | None:intergenic | 20.0% |
!!! | TATTATAATGGGTTTTTTGA+AGG | - | chr5_3:39877746-39877765 | Msa0810930:CDS | 20.0% |
!! | GATAGTAAGAAAATAGAATT+TGG | + | chr5_3:39878062-39878081 | None:intergenic | 20.0% |
!! | AATTTAATATTTGATACCCT+TGG | - | chr5_3:39878662-39878681 | Msa0810930:intron | 20.0% |
!!! | TTTAGATGTAATGAGTTTTA+TGG | - | chr5_3:39879300-39879319 | Msa0810930:CDS | 20.0% |
!! | AATACACATGTAAATAAAGA+GGG | - | chr5_3:39879817-39879836 | Msa0810930:five_prime_UTR | 20.0% |
!! | TAAATAAAGAGGGTTATTAA+GGG | - | chr5_3:39879827-39879846 | Msa0810930:five_prime_UTR | 20.0% |
!! | ATGATAATCAATCAATCATA+TGG | - | chr5_3:39879859-39879878 | Msa0810930:five_prime_UTR | 20.0% |
!! | TGATAATCAATCAATCATAT+GGG | - | chr5_3:39879860-39879879 | Msa0810930:five_prime_UTR | 20.0% |
!! | TGTTATTCATTGTAATACTT+TGG | - | chr5_3:39880000-39880019 | Msa0810930:five_prime_UTR | 20.0% |
!!! | GTTTTTTTTTTATCTGTGTG+TGG | - | chr5_3:39872161-39872180 | Msa0810930:three_prime_UTR | 25.0% |
! | TCTCTAAGCTTAATATCAAA+GGG | - | chr5_3:39872209-39872228 | Msa0810930:three_prime_UTR | 25.0% |
! | ATTTGAGAGAGAGAAAAAAA+GGG | + | chr5_3:39872261-39872280 | None:intergenic | 25.0% |
!!! | AATGAAATTTTGAGGGTTTT+TGG | + | chr5_3:39872345-39872364 | None:intergenic | 25.0% |
!! | AAACGTGAATGAAATTTTGA+GGG | + | chr5_3:39872352-39872371 | None:intergenic | 25.0% |
!! | TAAACGTGAATGAAATTTTG+AGG | + | chr5_3:39872353-39872372 | None:intergenic | 25.0% |
! | TGCATAAAGCTTAATTCTTT+AGG | - | chr5_3:39872417-39872436 | Msa0810930:three_prime_UTR | 25.0% |
!! | AGCTTAATTCTTTAGGTTTA+AGG | - | chr5_3:39872424-39872443 | Msa0810930:three_prime_UTR | 25.0% |
!! | TAGGTTTAAGGTTTCAAAAT+TGG | - | chr5_3:39872436-39872455 | Msa0810930:three_prime_UTR | 25.0% |
! | TCGCAACTTTACAAATAATA+AGG | + | chr5_3:39872611-39872630 | None:intergenic | 25.0% |
! | GTGTTTGATTGTTAATTAGA+AGG | - | chr5_3:39872795-39872814 | Msa0810930:intron | 25.0% |
! | TATTTGAATGTAACTACATG+TGG | + | chr5_3:39873577-39873596 | None:intergenic | 25.0% |
! | TGCATGTTTATGTATAAAGA+AGG | + | chr5_3:39873993-39874012 | None:intergenic | 25.0% |
!! | CATTCATTTTCCAAAAACAT+TGG | + | chr5_3:39874355-39874374 | None:intergenic | 25.0% |
! | TAAATTACATGAACACTTGA+AGG | + | chr5_3:39874443-39874462 | None:intergenic | 25.0% |
!!! | CCAATAAGTTTTTTCAGTTT+AGG | + | chr5_3:39874563-39874582 | None:intergenic | 25.0% |
! | CCTAAACTGAAAAAACTTAT+TGG | - | chr5_3:39874560-39874579 | Msa0810930:CDS | 25.0% |
!! | TTTTTATTATCCATGCCTTA+AGG | - | chr5_3:39875025-39875044 | Msa0810930:intron | 25.0% |
!! | TTTTATTATCCATGCCTTAA+GGG | - | chr5_3:39875026-39875045 | Msa0810930:intron | 25.0% |
! | AATATAATTCACCATTATGC+TGG | - | chr5_3:39875299-39875318 | Msa0810930:CDS | 25.0% |
! | AATATATTCAACCAGCATAA+TGG | + | chr5_3:39875313-39875332 | None:intergenic | 25.0% |
! | ATGTATTATGCATTTGCTTT+AGG | - | chr5_3:39875694-39875713 | Msa0810930:CDS | 25.0% |
! | GGATTAACAGTTTAATTAAG+TGG | + | chr5_3:39876386-39876405 | None:intergenic | 25.0% |
!!! | TACAACATACGATTTTTAGT+TGG | - | chr5_3:39876419-39876438 | Msa0810930:CDS | 25.0% |
! | TTATCTAATACGGTTCAATT+CGG | - | chr5_3:39876478-39876497 | Msa0810930:intron | 25.0% |
! | GCAGTTCATAATTAAGAATT+CGG | - | chr5_3:39877059-39877078 | Msa0810930:CDS | 25.0% |
! | AAGTAAGAACATGTGATAAT+AGG | - | chr5_3:39877205-39877224 | Msa0810930:intron | 25.0% |
! | ACTTTCACATGTTACAAATA+AGG | + | chr5_3:39877248-39877267 | None:intergenic | 25.0% |
! | CAAGCTACTATTATTGTTAA+TGG | - | chr5_3:39877286-39877305 | Msa0810930:intron | 25.0% |
!! | TGAAAGATCTCTTTGAAAAT+CGG | + | chr5_3:39877476-39877495 | None:intergenic | 25.0% |
!!! | ACTAATTTTAGTATGTGACT+AGG | - | chr5_3:39877523-39877542 | Msa0810930:CDS | 25.0% |
! | TCCATTTGTATATTCTTGTT+TGG | - | chr5_3:39877661-39877680 | Msa0810930:intron | 25.0% |
! | TCCAAACAAGAATATACAAA+TGG | + | chr5_3:39877665-39877684 | None:intergenic | 25.0% |
!! | CTTTTAAACTAATCATGTGT+TGG | - | chr5_3:39877772-39877791 | Msa0810930:CDS | 25.0% |
! | TACAAGACAATATATCACTT+AGG | + | chr5_3:39877807-39877826 | None:intergenic | 25.0% |
! | CTGAAAAAATAAATGATGAC+AGG | - | chr5_3:39878157-39878176 | Msa0810930:intron | 25.0% |
! | TATTTAAGCCCAAATTTCTT+AGG | + | chr5_3:39878269-39878288 | None:intergenic | 25.0% |
! | CTTACAATAACCTTTACATT+GGG | + | chr5_3:39878829-39878848 | None:intergenic | 25.0% |
! | CAATGTAAAGGTTATTGTAA+GGG | - | chr5_3:39878828-39878847 | Msa0810930:intron | 25.0% |
! | GCTACTAATGCTATTAAATT+TGG | - | chr5_3:39878893-39878912 | Msa0810930:CDS | 25.0% |
! | GATTAATTTACTAACTATGC+TGG | + | chr5_3:39878991-39879010 | None:intergenic | 25.0% |
! | ACATCTAAAAAGATACTACA+TGG | + | chr5_3:39879289-39879308 | None:intergenic | 25.0% |
! | TTTATTATGTGTGCAATACA+AGG | - | chr5_3:39879462-39879481 | Msa0810930:intron | 25.0% |
! | CAATACACATGTAAATAAAG+AGG | - | chr5_3:39879816-39879835 | Msa0810930:five_prime_UTR | 25.0% |
! | GTAAATAAAGAGGGTTATTA+AGG | - | chr5_3:39879826-39879845 | Msa0810930:five_prime_UTR | 25.0% |
! | AAATAAAGAGGGTTATTAAG+GGG | - | chr5_3:39879828-39879847 | Msa0810930:five_prime_UTR | 25.0% |
! | ATTCATTGTAATACTTTGGT+AGG | - | chr5_3:39880004-39880023 | Msa0810930:five_prime_UTR | 25.0% |
CTCTCTAAGCTTAATATCAA+AGG | - | chr5_3:39872208-39872227 | Msa0810930:three_prime_UTR | 30.0% | |
GTTTACTTGCTTAATCAGAA+AGG | + | chr5_3:39872239-39872258 | None:intergenic | 30.0% | |
GATTTGAGAGAGAGAAAAAA+AGG | + | chr5_3:39872262-39872281 | None:intergenic | 30.0% | |
TTCTGCCAAAATAACTACAT+TGG | - | chr5_3:39872732-39872751 | Msa0810930:intron | 30.0% | |
! | AATTTTCTACCACACAAGTA+GGG | - | chr5_3:39873286-39873305 | Msa0810930:intron | 30.0% |
TCACTTTCACACATTGTTAT+TGG | - | chr5_3:39873599-39873618 | Msa0810930:intron | 30.0% | |
ATAGCACAAATCACAAAGTT+AGG | + | chr5_3:39873700-39873719 | None:intergenic | 30.0% | |
! | GTACTTGATTCTGCTTTATT+TGG | + | chr5_3:39873855-39873874 | None:intergenic | 30.0% |
!! | TACTTTGAAATCTGTATCCA+GGG | - | chr5_3:39873872-39873891 | Msa0810930:intron | 30.0% |
GTTAAGAACTCAATATTGAG+AGG | + | chr5_3:39873971-39873990 | None:intergenic | 30.0% | |
TCTTTACTTAGAGATGCATT+TGG | - | chr5_3:39874376-39874395 | Msa0810930:CDS | 30.0% | |
CTTTACTTAGAGATGCATTT+GGG | - | chr5_3:39874377-39874396 | Msa0810930:CDS | 30.0% | |
AAAACTTATTGGCAAGATGA+AGG | - | chr5_3:39874571-39874590 | Msa0810930:CDS | 30.0% | |
! | AAGTTGTTACACCAACTTTT+AGG | + | chr5_3:39874934-39874953 | None:intergenic | 30.0% |
TTTATTATCCATGCCTTAAG+GGG | - | chr5_3:39875027-39875046 | Msa0810930:intron | 30.0% | |
ATTGAAGTTCAAGATTCCAA+GGG | - | chr5_3:39875383-39875402 | Msa0810930:CDS | 30.0% | |
AGATGACAATAGTCATCTTA+AGG | - | chr5_3:39875643-39875662 | Msa0810930:CDS | 30.0% | |
! | ACAGAGTTTGCTTCATATTA+TGG | - | chr5_3:39875895-39875914 | Msa0810930:intron | 30.0% |
TAGATATCTATCGTATGTCA+TGG | - | chr5_3:39876051-39876070 | Msa0810930:intron | 30.0% | |
GCAGATTATATACCAAGTTA+AGG | + | chr5_3:39876102-39876121 | None:intergenic | 30.0% | |
TTAAACTGTTAATCCAAGCA+TGG | - | chr5_3:39876391-39876410 | Msa0810930:CDS | 30.0% | |
! | ACTAATATTATCTCAGGTTG+CGG | - | chr5_3:39876815-39876834 | Msa0810930:intron | 30.0% |
TATATTCATCTGTGTCAGAA+AGG | + | chr5_3:39876863-39876882 | None:intergenic | 30.0% | |
GAATAATGAAAGCTGTTTGA+TGG | - | chr5_3:39876890-39876909 | Msa0810930:CDS | 30.0% | |
ATTCCTAAGATTTATGCACA+GGG | + | chr5_3:39876955-39876974 | None:intergenic | 30.0% | |
TTGAGAAAAGAAAGATACCT+AGG | + | chr5_3:39877020-39877039 | None:intergenic | 30.0% | |
TATATGGAAGCAGAAAGATT+TGG | + | chr5_3:39877358-39877377 | None:intergenic | 30.0% | |
! | GATTTTCAAAGAGATCTTTC+AGG | - | chr5_3:39877475-39877494 | Msa0810930:CDS | 30.0% |
!!! | TCTAAATGCTTTGCTTTTTC+AGG | - | chr5_3:39877839-39877858 | Msa0810930:intron | 30.0% |
TCATACATGTCATCAACAAA+GGG | + | chr5_3:39877903-39877922 | None:intergenic | 30.0% | |
!!! | ACATACATTTTCTAGAACCA+AGG | + | chr5_3:39877985-39878004 | None:intergenic | 30.0% |
AAAAAGAAAAATGCAGGATG+AGG | + | chr5_3:39878019-39878038 | None:intergenic | 30.0% | |
AATGGGAAAAAGAAAAATGC+AGG | + | chr5_3:39878025-39878044 | None:intergenic | 30.0% | |
! | TGGCAACATCTAAAACAAAT+GGG | + | chr5_3:39878042-39878061 | None:intergenic | 30.0% |
! | TTGGCAACATCTAAAACAAA+TGG | + | chr5_3:39878043-39878062 | None:intergenic | 30.0% |
GAAGAATACAAGTTTAACTC+TGG | - | chr5_3:39878123-39878142 | Msa0810930:CDS | 30.0% | |
!! | AGCTTTAGATAAACAGTATG+CGG | - | chr5_3:39878211-39878230 | Msa0810930:intron | 30.0% |
! | TTCTTTTGAATTCCTTGAAG+AGG | - | chr5_3:39878438-39878457 | Msa0810930:CDS | 30.0% |
TTGAATCACAGTTCAAATCA+TGG | - | chr5_3:39878486-39878505 | Msa0810930:CDS | 30.0% | |
TGAATCACAGTTCAAATCAT+GGG | - | chr5_3:39878487-39878506 | Msa0810930:CDS | 30.0% | |
!! | TATTCTGAAACCCAATGTAA+AGG | - | chr5_3:39878816-39878835 | Msa0810930:intron | 30.0% |
CCTTACAATAACCTTTACAT+TGG | + | chr5_3:39878830-39878849 | None:intergenic | 30.0% | |
CCAATGTAAAGGTTATTGTA+AGG | - | chr5_3:39878827-39878846 | Msa0810930:intron | 30.0% | |
TAATAGCATTAGTAGCAATG+TGG | + | chr5_3:39878889-39878908 | None:intergenic | 30.0% | |
GAAGATTCTTCAAGATTCAA+AGG | - | chr5_3:39879086-39879105 | Msa0810930:CDS | 30.0% | |
AATACTGTGAAGATAGCTTA+TGG | + | chr5_3:39879175-39879194 | None:intergenic | 30.0% | |
! | CAGGTAACTTAATTTTCTTC+TGG | - | chr5_3:39879249-39879268 | Msa0810930:CDS | 30.0% |
TAAAAAGATACTACATGGCA+AGG | + | chr5_3:39879284-39879303 | None:intergenic | 30.0% | |
!!! | ACAGGAAATTTTGAGTTTCT+TGG | - | chr5_3:39879350-39879369 | Msa0810930:CDS | 30.0% |
ACAGAAAAGAGAATAGATCA+TGG | - | chr5_3:39879376-39879395 | Msa0810930:CDS | 30.0% | |
GAGAATAGATCATGGTATAA+AGG | - | chr5_3:39879384-39879403 | Msa0810930:CDS | 30.0% | |
ATCATGGTATAAAGGTTCAA+GGG | - | chr5_3:39879392-39879411 | Msa0810930:CDS | 30.0% | |
AACCTCTGCTTAATTACTTA+AGG | - | chr5_3:39879435-39879454 | Msa0810930:CDS | 30.0% | |
AGCATATTAATCTTGTTCCT+AGG | + | chr5_3:39879926-39879945 | None:intergenic | 30.0% | |
TTAATATGCTCTTCACTTAC+TGG | - | chr5_3:39879936-39879955 | Msa0810930:five_prime_UTR | 30.0% | |
TAATATGCTCTTCACTTACT+GGG | - | chr5_3:39879937-39879956 | Msa0810930:five_prime_UTR | 30.0% | |
TGTGAATCAGAAACCGTAAT+GGG | + | chr5_3:39872291-39872310 | None:intergenic | 35.0% | |
!! | ATTCAGAGGTTGGTTCTATT+AGG | - | chr5_3:39872471-39872490 | Msa0810930:CDS | 35.0% |
TTAGGTAAGATGTTCACTGA+AGG | - | chr5_3:39872489-39872508 | Msa0810930:CDS | 35.0% | |
TTGACAAAAACGCACTTAGA+TGG | - | chr5_3:39872514-39872533 | Msa0810930:CDS | 35.0% | |
TGACAAAAACGCACTTAGAT+GGG | - | chr5_3:39872515-39872534 | Msa0810930:CDS | 35.0% | |
!! | CCACTTTTCATTCCACTAAT+CGG | + | chr5_3:39872859-39872878 | None:intergenic | 35.0% |
ATTAGTGGAATGAAAAGTGG+CGG | - | chr5_3:39872859-39872878 | Msa0810930:CDS | 35.0% | |
TACCACCACCATCAAAATTT+AGG | - | chr5_3:39872899-39872918 | Msa0810930:CDS | 35.0% | |
! | TGACCACTCCTAAATTTTGA+TGG | + | chr5_3:39872910-39872929 | None:intergenic | 35.0% |
TGCTAATAAGTTACCTGTCT+CGG | - | chr5_3:39872936-39872955 | Msa0810930:intron | 35.0% | |
TAGCGGTTCAAATAGTGATA+TGG | - | chr5_3:39872975-39872994 | Msa0810930:intron | 35.0% | |
!! | TTATGGTGGAAGGTATTCTT+TGG | - | chr5_3:39873026-39873045 | Msa0810930:CDS | 35.0% |
! | GAATTTTCTACCACACAAGT+AGG | - | chr5_3:39873285-39873304 | Msa0810930:intron | 35.0% |
CTTTGAACATTCATCCTTGA+AGG | + | chr5_3:39873378-39873397 | None:intergenic | 35.0% | |
TGTTCAAAGTTCTGCAGAAA+AGG | - | chr5_3:39873389-39873408 | Msa0810930:intron | 35.0% | |
GAATGAAATACTACGTAGCA+CGG | - | chr5_3:39873495-39873514 | Msa0810930:intron | 35.0% | |
GATATTTCACCTATGAAGCA+CGG | + | chr5_3:39873663-39873682 | None:intergenic | 35.0% | |
GCTTCATAGGTGAAATATCT+TGG | - | chr5_3:39873664-39873683 | Msa0810930:CDS | 35.0% | |
! | TGCTATGAGAATTTTCAGAG+TGG | - | chr5_3:39873714-39873733 | Msa0810930:CDS | 35.0% |
! | ATGAGAATTTTCAGAGTGGA+AGG | - | chr5_3:39873718-39873737 | Msa0810930:CDS | 35.0% |
TTGAGTAGAACCACAAAATG+GGG | + | chr5_3:39873781-39873800 | None:intergenic | 35.0% | |
CTTGAGTAGAACCACAAAAT+GGG | + | chr5_3:39873782-39873801 | None:intergenic | 35.0% | |
TCTTGAGTAGAACCACAAAA+TGG | + | chr5_3:39873783-39873802 | None:intergenic | 35.0% | |
AGAGATAAGACAAACTAACG+AGG | - | chr5_3:39873800-39873819 | Msa0810930:CDS | 35.0% | |
!! | GTACTTTGAAATCTGTATCC+AGG | - | chr5_3:39873871-39873890 | Msa0810930:intron | 35.0% |
TGATACCTTGCATGAAATGT+TGG | + | chr5_3:39874159-39874178 | None:intergenic | 35.0% | |
! | TGAATTCTTTTCAGTGCTCT+TGG | - | chr5_3:39874250-39874269 | Msa0810930:intron | 35.0% |
! | GAATTCTTTTCAGTGCTCTT+GGG | - | chr5_3:39874251-39874270 | Msa0810930:intron | 35.0% |
TATGCAATTACTGCATACCA+TGG | + | chr5_3:39874277-39874296 | None:intergenic | 35.0% | |
! | TATGGAAGCTCCAATGTTTT+TGG | - | chr5_3:39874342-39874361 | Msa0810930:CDS | 35.0% |
! | AATGGAGAACTTTCTAGTGA+GGG | - | chr5_3:39874530-39874549 | Msa0810930:intron | 35.0% |
ATGTCACAAAAGACTCACTA+TGG | + | chr5_3:39874649-39874668 | None:intergenic | 35.0% | |
TTGACTGCAAATTTGAGAAG+TGG | + | chr5_3:39874778-39874797 | None:intergenic | 35.0% | |
TTGCAGTCAAAACTATCTTC+TGG | - | chr5_3:39874788-39874807 | Msa0810930:CDS | 35.0% | |
AGTCAAAACTATCTTCTGGT+TGG | - | chr5_3:39874792-39874811 | Msa0810930:CDS | 35.0% | |
!! | AAGTTGGTGTAACAACTTTG+CGG | - | chr5_3:39874936-39874955 | Msa0810930:intron | 35.0% |
! | TTCCAACATTTTTCCCCTTA+AGG | + | chr5_3:39875043-39875062 | None:intergenic | 35.0% |
ATGTCTCTGATGATATACAC+AGG | + | chr5_3:39875170-39875189 | None:intergenic | 35.0% | |
TTACAACATATGGACTTCAC+TGG | + | chr5_3:39875256-39875275 | None:intergenic | 35.0% | |
! | TACAGTTTTCCAGATAGTCT+TGG | - | chr5_3:39875347-39875366 | Msa0810930:CDS | 35.0% |
AAATCATCTCCAAGACTATC+TGG | + | chr5_3:39875359-39875378 | None:intergenic | 35.0% | |
CATTGAAGTTCAAGATTCCA+AGG | - | chr5_3:39875382-39875401 | Msa0810930:CDS | 35.0% | |
!!! | ATTCCAAGGGAAAGCATTTT+GGG | - | chr5_3:39875396-39875415 | Msa0810930:CDS | 35.0% |
AGAAGTTGCAATGAAAGTTC+AGG | - | chr5_3:39875822-39875841 | Msa0810930:intron | 35.0% | |
GAAGTTGCAATGAAAGTTCA+GGG | - | chr5_3:39875823-39875842 | Msa0810930:intron | 35.0% | |
CAAAGGAACCTAGAATTACA+TGG | - | chr5_3:39875853-39875872 | Msa0810930:intron | 35.0% | |
AATTACATGGTCCATGGAAA+TGG | - | chr5_3:39875866-39875885 | Msa0810930:intron | 35.0% | |
CTATTTCCCTTCATGATAAC+AGG | + | chr5_3:39876130-39876149 | None:intergenic | 35.0% | |
TCTTATCAGAATCGACTACT+AGG | - | chr5_3:39876504-39876523 | Msa0810930:intron | 35.0% | |
TATCTGTTCAATTTCGTCCT+TGG | + | chr5_3:39876535-39876554 | None:intergenic | 35.0% | |
AGCTTGTAAAGTTTAACAGC+CGG | + | chr5_3:39876663-39876682 | None:intergenic | 35.0% | |
TCATGATATCTTATCTCCTG+AGG | - | chr5_3:39876686-39876705 | Msa0810930:CDS | 35.0% | |
AAACCCTGTGCATAAATCTT+AGG | - | chr5_3:39876949-39876968 | Msa0810930:intron | 35.0% | |
CATTCCTAAGATTTATGCAC+AGG | + | chr5_3:39876956-39876975 | None:intergenic | 35.0% | |
!! | GTTAATGGTTCTAATATGGC+TGG | - | chr5_3:39877301-39877320 | Msa0810930:CDS | 35.0% |
TTCCTTCTTAGTCCTATCAA+AGG | - | chr5_3:39877615-39877634 | Msa0810930:intron | 35.0% | |
GCAAAGATAGACGTTTATCT+TGG | + | chr5_3:39877689-39877708 | None:intergenic | 35.0% | |
!!! | CTTTGCTTTTTCAGGTGAAA+TGG | - | chr5_3:39877847-39877866 | Msa0810930:intron | 35.0% |
CTCATACATGTCATCAACAA+AGG | + | chr5_3:39877904-39877923 | None:intergenic | 35.0% | |
!! | TTGTTGATGACATGTATGAG+CGG | - | chr5_3:39877904-39877923 | Msa0810930:CDS | 35.0% |
! | TCTAGAACCAAGGTATATTC+TGG | + | chr5_3:39877975-39877994 | None:intergenic | 35.0% |
! | AACTTATGTCACCTTTTGTC+AGG | - | chr5_3:39878409-39878428 | Msa0810930:CDS | 35.0% |
AAGAATTCCAACCTGACAAA+AGG | + | chr5_3:39878423-39878442 | None:intergenic | 35.0% | |
TTGAACTGTGATTCAATCCT+TGG | + | chr5_3:39878482-39878501 | None:intergenic | 35.0% | |
TTTGACAACATTGATGTGCT+TGG | + | chr5_3:39878701-39878720 | None:intergenic | 35.0% | |
GACGAACATAGTAACTTAAC+AGG | + | chr5_3:39878922-39878941 | None:intergenic | 35.0% | |
TCAAGATTCAAAGGAAACAG+TGG | - | chr5_3:39879095-39879114 | Msa0810930:CDS | 35.0% | |
ATTAAGTTACCTGTCCCATT+CGG | + | chr5_3:39879242-39879261 | None:intergenic | 35.0% | |
GATCATGGTATAAAGGTTCA+AGG | - | chr5_3:39879391-39879410 | Msa0810930:CDS | 35.0% | |
GACCTTAAGTAATTAAGCAG+AGG | + | chr5_3:39879440-39879459 | None:intergenic | 35.0% | |
! | TTTTCTTACAGCCCATAATC+CGG | + | chr5_3:39879593-39879612 | None:intergenic | 35.0% |
AAACTGTTGTCCTTGTGATT+AGG | + | chr5_3:39879777-39879796 | None:intergenic | 35.0% | |
TCAAATCTCGAACCCCATTA+CGG | - | chr5_3:39872275-39872294 | Msa0810930:three_prime_UTR | 40.0% | |
GTGAATCAGAAACCGTAATG+GGG | + | chr5_3:39872290-39872309 | None:intergenic | 40.0% | |
GTGTGAATCAGAAACCGTAA+TGG | + | chr5_3:39872292-39872311 | None:intergenic | 40.0% | |
GTTTCTGATTCACACTTCTG+TGG | - | chr5_3:39872297-39872316 | Msa0810930:three_prime_UTR | 40.0% | |
! | GGTAGTGCATTTTCATTCAG+AGG | - | chr5_3:39872457-39872476 | Msa0810930:exon | 40.0% |
! | GTGCATTTTCATTCAGAGGT+TGG | - | chr5_3:39872461-39872480 | Msa0810930:exon | 40.0% |
CTCATAGCTGTGTTTGAGAA+TGG | + | chr5_3:39872826-39872845 | None:intergenic | 40.0% | |
CCGATTAGTGGAATGAAAAG+TGG | - | chr5_3:39872856-39872875 | Msa0810930:CDS | 40.0% | |
!!! | CTCCTAAATTTTGATGGTGG+TGG | + | chr5_3:39872904-39872923 | None:intergenic | 40.0% |
!! | CCACTCCTAAATTTTGATGG+TGG | + | chr5_3:39872907-39872926 | None:intergenic | 40.0% |
CCACCATCAAAATTTAGGAG+TGG | - | chr5_3:39872904-39872923 | Msa0810930:intron | 40.0% | |
GAGACAGGTAACTTATTAGC+AGG | + | chr5_3:39872937-39872956 | None:intergenic | 40.0% | |
TAATAAGTTACCTGTCTCGG+CGG | - | chr5_3:39872939-39872958 | Msa0810930:intron | 40.0% | |
GATTCGGAAGAGGAAGTTTA+TGG | - | chr5_3:39873009-39873028 | Msa0810930:intron | 40.0% | |
! | AAGAGGAAGTTTATGGTGGA+AGG | - | chr5_3:39873016-39873035 | Msa0810930:intron | 40.0% |
TATCTCTTAGCAGCACCATT+GGG | + | chr5_3:39873078-39873097 | None:intergenic | 40.0% | |
ATATCTCTTAGCAGCACCAT+TGG | + | chr5_3:39873079-39873098 | None:intergenic | 40.0% | |
!! | AATGGTGCTGCTAAGAGATA+TGG | - | chr5_3:39873078-39873097 | Msa0810930:CDS | 40.0% |
!! | ATGGTGCTGCTAAGAGATAT+GGG | - | chr5_3:39873079-39873098 | Msa0810930:CDS | 40.0% |
TCTTCCAGTAAGTGTTTCTC+TGG | + | chr5_3:39873169-39873188 | None:intergenic | 40.0% | |
GAAACACTTACTGGAAGACA+AGG | - | chr5_3:39873171-39873190 | Msa0810930:CDS | 40.0% | |
TTTCACTGAGGATGATTCGT+CGG | - | chr5_3:39873245-39873264 | Msa0810930:intron | 40.0% | |
CAAGTAGGGAGTAGTATCAA+TGG | - | chr5_3:39873300-39873319 | Msa0810930:intron | 40.0% | |
!! | GACATATAAGCCCTGCTTTT+TGG | + | chr5_3:39873333-39873352 | None:intergenic | 40.0% |
ATGCTTCTAGTGTACCTTCA+AGG | - | chr5_3:39873361-39873380 | Msa0810930:intron | 40.0% | |
! | TTGCTAGCTACTGCTTCTTT+TGG | - | chr5_3:39873470-39873489 | Msa0810930:intron | 40.0% |
! | TGCTAGCTACTGCTTCTTTT+GGG | - | chr5_3:39873471-39873490 | Msa0810930:intron | 40.0% |
TGAGTAGAACCACAAAATGG+GGG | + | chr5_3:39873780-39873799 | None:intergenic | 40.0% | |
ATGGTTCTCTAACTTATCCC+TGG | + | chr5_3:39873892-39873911 | None:intergenic | 40.0% | |
AGGGATAAGTTAGAGAACCA+TGG | - | chr5_3:39873891-39873910 | Msa0810930:intron | 40.0% | |
CAAGCTCGGAAAAATTCGTT+AGG | - | chr5_3:39873919-39873938 | Msa0810930:intron | 40.0% | |
ACCTTGCATGAAATGTTGGA+AGG | + | chr5_3:39874155-39874174 | None:intergenic | 40.0% | |
GAGCTAATGGTGAAATGCAA+TGG | - | chr5_3:39874512-39874531 | Msa0810930:intron | 40.0% | |
! | CAATGGAGAACTTTCTAGTG+AGG | - | chr5_3:39874529-39874548 | Msa0810930:intron | 40.0% |
TTCCCTGACACATAAAAGCT+TGG | - | chr5_3:39874862-39874881 | Msa0810930:CDS | 40.0% | |
! | TGCCAAGCTTTTATGTGTCA+GGG | + | chr5_3:39874867-39874886 | None:intergenic | 40.0% |
! | ATGCCAAGCTTTTATGTGTC+AGG | + | chr5_3:39874868-39874887 | None:intergenic | 40.0% |
CGCTATATACAACAAGTCTC+TGG | - | chr5_3:39874905-39874924 | Msa0810930:CDS | 40.0% | |
TATGAAGCTGTGCAAGGTAT+GGG | - | chr5_3:39874974-39874993 | Msa0810930:intron | 40.0% | |
! | ACATTTTTCCCCTTAAGGCA+TGG | + | chr5_3:39875038-39875057 | None:intergenic | 40.0% |
TGCCTTAAGGGGAAAAATGT+TGG | - | chr5_3:39875038-39875057 | Msa0810930:intron | 40.0% | |
TAGTTGAAGAAGACGCCATT+AGG | - | chr5_3:39875217-39875236 | Msa0810930:intron | 40.0% | |
!!! | GATTCCAAGGGAAAGCATTT+TGG | - | chr5_3:39875395-39875414 | Msa0810930:CDS | 40.0% |
!! | TTTTTAGTGCCTGTGTTGAG+AGG | - | chr5_3:39875489-39875508 | Msa0810930:intron | 40.0% |
TAATGATCACCTCTCAACAC+AGG | + | chr5_3:39875501-39875520 | None:intergenic | 40.0% | |
ATGACTATTGTCATCTGCAC+TGG | + | chr5_3:39875639-39875658 | None:intergenic | 40.0% | |
!! | TCATTGCAACTTCTAGAACC+AGG | + | chr5_3:39875816-39875835 | None:intergenic | 40.0% |
ACCTAGAATTACATGGTCCA+TGG | - | chr5_3:39875860-39875879 | Msa0810930:intron | 40.0% | |
TCCATGGACCATGTAATTCT+AGG | + | chr5_3:39875864-39875883 | None:intergenic | 40.0% | |
CTGAGATTTATACGAAGCTG+AGG | - | chr5_3:39875923-39875942 | Msa0810930:intron | 40.0% | |
AAGTTAAGGCAATCTGCTGT+TGG | + | chr5_3:39876088-39876107 | None:intergenic | 40.0% | |
AACAGCAGATTGCCTTAACT+TGG | - | chr5_3:39876087-39876106 | Msa0810930:intron | 40.0% | |
CTTGCACCTGTTATCATGAA+GGG | - | chr5_3:39876121-39876140 | Msa0810930:CDS | 40.0% | |
ATGTTGTATATGGCCATGCT+TGG | + | chr5_3:39876407-39876426 | None:intergenic | 40.0% | |
CTTGATGAGTCATCTTTCTC+TGG | - | chr5_3:39876585-39876604 | Msa0810930:intron | 40.0% | |
! | GTAGTGACAGAAACTGGTTT+GGG | + | chr5_3:39876712-39876731 | None:intergenic | 40.0% |
AGTAGTGACAGAAACTGGTT+TGG | + | chr5_3:39876713-39876732 | None:intergenic | 40.0% | |
! | GGTTTTCATCTTCTGGTAAG+CGG | + | chr5_3:39876934-39876953 | None:intergenic | 40.0% |
TTCAAAGAGATCTTTCAGGC+TGG | - | chr5_3:39877479-39877498 | Msa0810930:CDS | 40.0% | |
CACCTTTGATAGGACTAAGA+AGG | + | chr5_3:39877620-39877639 | None:intergenic | 40.0% | |
CTTCTTAGTCCTATCAAAGG+TGG | - | chr5_3:39877618-39877637 | Msa0810930:intron | 40.0% | |
!!! | CTTTTTCAGGTGAAATGGTC+TGG | - | chr5_3:39877852-39877871 | Msa0810930:intron | 40.0% |
GGAAACATTGACAGACTATG+AGG | - | chr5_3:39877932-39877951 | Msa0810930:CDS | 40.0% | |
GGCAATAGCTGATATTGAGA+AGG | - | chr5_3:39878178-39878197 | Msa0810930:intron | 40.0% | |
TGATATTGAGAAGGCGATTG+TGG | - | chr5_3:39878187-39878206 | Msa0810930:intron | 40.0% | |
AGCTCCTCTTAAAGATAGCA+TGG | - | chr5_3:39878241-39878260 | Msa0810930:intron | 40.0% | |
AGCATGGCACCTAAGAAATT+TGG | - | chr5_3:39878257-39878276 | Msa0810930:intron | 40.0% | |
GCATGGCACCTAAGAAATTT+GGG | - | chr5_3:39878258-39878277 | Msa0810930:intron | 40.0% | |
ATGTCCAGAAACTTGCCAAA+CGG | - | chr5_3:39878288-39878307 | Msa0810930:intron | 40.0% | |
! | TATGTCACCTTTTGTCAGGT+TGG | - | chr5_3:39878413-39878432 | Msa0810930:CDS | 40.0% |
AAAGTTCAGGAACTACTTGC+AGG | - | chr5_3:39878583-39878602 | Msa0810930:intron | 40.0% | |
! | TGGCACAACTCTTTTACCAA+GGG | + | chr5_3:39878681-39878700 | None:intergenic | 40.0% |
! | TTGGCACAACTCTTTTACCA+AGG | + | chr5_3:39878682-39878701 | None:intergenic | 40.0% |
CTAGAAACATATGCAACCTC+TGG | + | chr5_3:39878865-39878884 | None:intergenic | 40.0% | |
TAGCATTCTGTAACTTCGTC+TGG | + | chr5_3:39879056-39879075 | None:intergenic | 40.0% | |
ATGGTATAAAGGTTCAAGGG+TGG | - | chr5_3:39879395-39879414 | Msa0810930:CDS | 40.0% | |
ATTTAGTCAATGTGCGCTCT+TGG | - | chr5_3:39879565-39879584 | Msa0810930:intron | 40.0% | |
TTTAGTCAATGTGCGCTCTT+GGG | - | chr5_3:39879566-39879585 | Msa0810930:intron | 40.0% | |
AACCTGCATTCATGCATACA+CGG | + | chr5_3:39879637-39879656 | None:intergenic | 40.0% | |
TAGAAGTTGTTGCATCTGTG+AGG | + | chr5_3:39879676-39879695 | None:intergenic | 40.0% | |
TCACAGATGCAACAACTTCT+AGG | - | chr5_3:39879675-39879694 | Msa0810930:intron | 40.0% | |
TGCGATACAAGAGAAAGACA+TGG | - | chr5_3:39879701-39879720 | Msa0810930:intron | 40.0% | |
GATACAAGAGAAAGACATGG+AGG | - | chr5_3:39879704-39879723 | Msa0810930:intron | 40.0% | |
TAAAGACGCTCCTAATCACA+AGG | - | chr5_3:39879764-39879783 | Msa0810930:exon | 40.0% | |
GCTTACTCCTGCTACAAAAT+TGG | + | chr5_3:39879891-39879910 | None:intergenic | 40.0% | |
AGATCTCGTGATCCGATTAG+TGG | - | chr5_3:39872844-39872863 | Msa0810930:intron | 45.0% | |
TCGGAAGAGGAAGTTTATGG+TGG | - | chr5_3:39873012-39873031 | Msa0810930:intron | 45.0% | |
ATCTCTTAGCAGCACCATTG+GGG | + | chr5_3:39873077-39873096 | None:intergenic | 45.0% | |
TCGTCCAGAGAAACACTTAC+TGG | - | chr5_3:39873162-39873181 | Msa0810930:CDS | 45.0% | |
TGGAAGACAAGGAATGACGA+GGG | - | chr5_3:39873182-39873201 | Msa0810930:CDS | 45.0% | |
TTAGCAGCACTCCTCATTAC+CGG | + | chr5_3:39873210-39873229 | None:intergenic | 45.0% | |
!! | GTAATGAGGAGTGCTGCTAA+TGG | - | chr5_3:39873210-39873229 | Msa0810930:intron | 45.0% |
AAGGCAGAATGGTTTCACTG+AGG | - | chr5_3:39873233-39873252 | Msa0810930:intron | 45.0% | |
GATACTACTCCCTACTTGTG+TGG | + | chr5_3:39873298-39873317 | None:intergenic | 45.0% | |
ATGGCACTCTTCCAAAAAGC+AGG | - | chr5_3:39873319-39873338 | Msa0810930:intron | 45.0% | |
TGGCACTCTTCCAAAAAGCA+GGG | - | chr5_3:39873320-39873339 | Msa0810930:intron | 45.0% | |
TGTCCAACACGTGTCAATGT+CGG | - | chr5_3:39873537-39873556 | Msa0810930:intron | 45.0% | |
! | TGGAAGGTTATCTGATGACG+AGG | - | chr5_3:39873734-39873753 | Msa0810930:CDS | 45.0% |
GTACTACGTGTTGCAGAAGT+TGG | + | chr5_3:39873831-39873850 | None:intergenic | 45.0% | |
!! | AGAACTGCTACTGGTTCAGA+GGG | - | chr5_3:39874099-39874118 | Msa0810930:intron | 45.0% |
GCCTTCCAACATTTCATGCA+AGG | - | chr5_3:39874151-39874170 | Msa0810930:intron | 45.0% | |
AGTGCTTCTTCAACCAGAAG+AGG | - | chr5_3:39874490-39874509 | Msa0810930:intron | 45.0% | |
TCAACCAGAAGAGGAGCTAA+TGG | - | chr5_3:39874499-39874518 | Msa0810930:intron | 45.0% | |
TTCACCATTAGCTCCTCTTC+TGG | + | chr5_3:39874506-39874525 | None:intergenic | 45.0% | |
! | ATTGGCAAGATGAAGGTGCA+AGG | - | chr5_3:39874578-39874597 | Msa0810930:CDS | 45.0% |
TGCAGTACGCAAAGTCAAAG+TGG | - | chr5_3:39874679-39874698 | Msa0810930:intron | 45.0% | |
GCAGTACGCAAAGTCAAAGT+GGG | - | chr5_3:39874680-39874699 | Msa0810930:intron | 45.0% | |
CAGTACGCAAAGTCAAAGTG+GGG | - | chr5_3:39874681-39874700 | Msa0810930:intron | 45.0% | |
ACATGCTACATCCAGTAGGA+GGG | + | chr5_3:39874712-39874731 | None:intergenic | 45.0% | |
GATGACATGCTACATCCAGT+AGG | + | chr5_3:39874716-39874735 | None:intergenic | 45.0% | |
GTACCACATTTGCCTGCAAA+TGG | - | chr5_3:39874839-39874858 | Msa0810930:CDS | 45.0% | |
GAACCATTTGCAGGCAAATG+TGG | + | chr5_3:39874845-39874864 | None:intergenic | 45.0% | |
GTCTCTGGACTCCTAAAAGT+TGG | - | chr5_3:39874920-39874939 | Msa0810930:intron | 45.0% | |
CATACCTTGCACAGCTTCAT+AGG | + | chr5_3:39874975-39874994 | None:intergenic | 45.0% | |
CTATGAAGCTGTGCAAGGTA+TGG | - | chr5_3:39874973-39874992 | Msa0810930:intron | 45.0% | |
ATATGGACTTCACTGGATCC+AGG | + | chr5_3:39875249-39875268 | None:intergenic | 45.0% | |
AACAGTCTGACAAAGTACGC+TGG | - | chr5_3:39875546-39875565 | Msa0810930:CDS | 45.0% | |
GTATCTTGCCAACAAGCTCA+TGG | + | chr5_3:39875595-39875614 | None:intergenic | 45.0% | |
TTGTCTTTGTGGTTGCAGTG+TGG | - | chr5_3:39875763-39875782 | Msa0810930:intron | 45.0% | |
AAGTTCAGGGCTTTCAGCAA+AGG | - | chr5_3:39875836-39875855 | Msa0810930:intron | 45.0% | |
TCTGTCAAGAGCCATTTCCA+TGG | + | chr5_3:39875880-39875899 | None:intergenic | 45.0% | |
GCTTGCACCTGTTATCATGA+AGG | - | chr5_3:39876120-39876139 | Msa0810930:CDS | 45.0% | |
ATGTCGATGATACCTCTTGG+TGG | + | chr5_3:39876168-39876187 | None:intergenic | 45.0% | |
GAGATGTCGATGATACCTCT+TGG | + | chr5_3:39876171-39876190 | None:intergenic | 45.0% | |
!! | ATCTTTCTCTGGAATCGTCG+AGG | - | chr5_3:39876596-39876615 | Msa0810930:intron | 45.0% |
! | AAGTTTAACAGCCGGTTCCA+AGG | + | chr5_3:39876655-39876674 | None:intergenic | 45.0% |
CTGGAAGTAGTGACAGAAAC+TGG | + | chr5_3:39876718-39876737 | None:intergenic | 45.0% | |
CAGTTTCTGTCACTACTTCC+AGG | - | chr5_3:39876716-39876735 | Msa0810930:intron | 45.0% | |
TTCTGTCACTACTTCCAGGT+TGG | - | chr5_3:39876720-39876739 | Msa0810930:intron | 45.0% | |
GAACTCAAGTTTCTCCAACC+TGG | + | chr5_3:39876737-39876756 | None:intergenic | 45.0% | |
! | TCAGGTTGCGGCAAAAAAGA+GGG | - | chr5_3:39876827-39876846 | Msa0810930:CDS | 45.0% |
TAAGCGGTAGACATGGTCAA+AGG | + | chr5_3:39876918-39876937 | None:intergenic | 45.0% | |
! | TGCACAGGGTTTTCATCTTC+TGG | + | chr5_3:39876941-39876960 | None:intergenic | 45.0% |
TGGAAGCAGAAAGATTTGGC+AGG | + | chr5_3:39877354-39877373 | None:intergenic | 45.0% | |
GCAAAGCTCTGTGCTGTATA+TGG | + | chr5_3:39877374-39877393 | None:intergenic | 45.0% | |
! | AGTTCTGCTACTGGTGATGA+TGG | + | chr5_3:39877439-39877458 | None:intergenic | 45.0% |
GCAATGACAAGTTCTGCTAC+TGG | + | chr5_3:39877448-39877467 | None:intergenic | 45.0% | |
TAGTCCTATCAAAGGTGGAG+TGG | - | chr5_3:39877623-39877642 | Msa0810930:intron | 45.0% | |
CGAGTCGTGCAAATTAGACA+AGG | - | chr5_3:39877710-39877729 | Msa0810930:CDS | 45.0% | |
! | GGTGCCATGCTATCTTTAAG+AGG | + | chr5_3:39878248-39878267 | None:intergenic | 45.0% |
TAGACCGTTTGGCAAGTTTC+TGG | + | chr5_3:39878295-39878314 | None:intergenic | 45.0% | |
ATAGGCACATGTAGACCGTT+TGG | + | chr5_3:39878306-39878325 | None:intergenic | 45.0% | |
TAAATTCAACCCACCTCCTC+AGG | + | chr5_3:39878335-39878354 | None:intergenic | 45.0% | |
GCTTCTTGCTTACCAAATGC+TGG | - | chr5_3:39878509-39878528 | Msa0810930:CDS | 45.0% | |
GAACTTTGCTCTCAGCATCA+CGG | + | chr5_3:39878570-39878589 | None:intergenic | 45.0% | |
TGATGCTGAGAGCAAAGTTC+AGG | - | chr5_3:39878570-39878589 | Msa0810930:intron | 45.0% | |
GAACTACTTGCAGGCTATTG+TGG | - | chr5_3:39878592-39878611 | Msa0810930:intron | 45.0% | |
GCAGTACTGTAAGTTACGAG+AGG | - | chr5_3:39878723-39878742 | Msa0810930:intron | 45.0% | |
AAGGGAACAATACTGACCAG+AGG | - | chr5_3:39878846-39878865 | Msa0810930:intron | 45.0% | |
CTAGCTAACTGCTCTTTCAG+TGG | + | chr5_3:39879150-39879169 | None:intergenic | 45.0% | |
! | GTTTTCATTGCCATCTGTCG+AGG | - | chr5_3:39879207-39879226 | Msa0810930:CDS | 45.0% |
TTGCCATCTGTCGAGGTTAT+TGG | - | chr5_3:39879214-39879233 | Msa0810930:CDS | 45.0% | |
TGCCATCTGTCGAGGTTATT+GGG | - | chr5_3:39879215-39879234 | Msa0810930:CDS | 45.0% | |
AACCGTGTATGCATGAATGC+AGG | - | chr5_3:39879632-39879651 | Msa0810930:intron | 45.0% | |
GTATGCATGAATGCAGGTTC+TGG | - | chr5_3:39879638-39879657 | Msa0810930:intron | 45.0% | |
! | GGTCACACCAATTTTGTAGC+AGG | - | chr5_3:39879881-39879900 | Msa0810930:five_prime_UTR | 45.0% |
TAAGCAACTCAACTGCTCCT+AGG | - | chr5_3:39879906-39879925 | Msa0810930:five_prime_UTR | 45.0% | |
AGTGGAATGAAAAGTGGCGG+CGG | - | chr5_3:39872862-39872881 | Msa0810930:CDS | 50.0% | |
GCGGTTGAGACATTCGATAG+CGG | - | chr5_3:39872958-39872977 | Msa0810930:intron | 50.0% | |
!! | TATGGACGCCAGCGTTGATT+CGG | - | chr5_3:39872993-39873012 | Msa0810930:intron | 50.0% |
TTCCTCTTCCGAATCAACGC+TGG | + | chr5_3:39873004-39873023 | None:intergenic | 50.0% | |
TTGGGGACTCTGTTGTCTTG+TGG | + | chr5_3:39873060-39873079 | None:intergenic | 50.0% | |
CAAGACAACAGAGTCCCCAA+TGG | - | chr5_3:39873060-39873079 | Msa0810930:CDS | 50.0% | |
GGAATGTTGCTCAGATGCCA+CGG | - | chr5_3:39873100-39873119 | Msa0810930:CDS | 50.0% | |
CTGGAAGACAAGGAATGACG+AGG | - | chr5_3:39873181-39873200 | Msa0810930:CDS | 50.0% | |
ACAAGGAATGACGAGGGATC+CGG | - | chr5_3:39873188-39873207 | Msa0810930:CDS | 50.0% | |
!! | TGAGGAGTGCTGCTAATGGA+AGG | - | chr5_3:39873214-39873233 | Msa0810930:intron | 50.0% |
GCTGCTAATGGAAGGCAGAA+TGG | - | chr5_3:39873222-39873241 | Msa0810930:intron | 50.0% | |
GGATGATTCGTCGGATTCTG+CGG | - | chr5_3:39873254-39873273 | Msa0810930:intron | 50.0% | |
AGCAGGGCTTATATGTCAGC+AGG | - | chr5_3:39873336-39873355 | Msa0810930:intron | 50.0% | |
GCAGGGCTTATATGTCAGCA+GGG | - | chr5_3:39873337-39873356 | Msa0810930:intron | 50.0% | |
ACTACGTAGCACGGACACTT+CGG | - | chr5_3:39873504-39873523 | Msa0810930:intron | 50.0% | |
TGTCCGACATTGACACGTGT+TGG | + | chr5_3:39873543-39873562 | None:intergenic | 50.0% | |
GTCAATGTCGGACACTCACA+CGG | - | chr5_3:39873549-39873568 | Msa0810930:intron | 50.0% | |
GTAAGTGTCTGTGCTGTGTC+CGG | - | chr5_3:39873623-39873642 | Msa0810930:intron | 50.0% | |
CACGGACACAGACACAATAC+CGG | + | chr5_3:39873645-39873664 | None:intergenic | 50.0% | |
TGTCTGTGTCCGTGCTTCAT+AGG | - | chr5_3:39873651-39873670 | Msa0810930:CDS | 50.0% | |
GAACCATGGAGATGCAAGCT+CGG | - | chr5_3:39873905-39873924 | Msa0810930:intron | 50.0% | |
TTTCCGAGCTTGCATCTCCA+TGG | + | chr5_3:39873911-39873930 | None:intergenic | 50.0% | |
TGCGTTCACAGAACTGCTAC+TGG | - | chr5_3:39874090-39874109 | Msa0810930:intron | 50.0% | |
!! | CAGAACTGCTACTGGTTCAG+AGG | - | chr5_3:39874098-39874117 | Msa0810930:intron | 50.0% |
AAGGCGAGGTGGTTGTGAAT+TGG | + | chr5_3:39874136-39874155 | None:intergenic | 50.0% | |
TGAAATGTTGGAAGGCGAGG+TGG | + | chr5_3:39874147-39874166 | None:intergenic | 50.0% | |
GCATGAAATGTTGGAAGGCG+AGG | + | chr5_3:39874150-39874169 | None:intergenic | 50.0% | |
! | TTTTCAGTGCTCTTGGGCCA+TGG | - | chr5_3:39874257-39874276 | Msa0810930:intron | 50.0% |
GACATGCTACATCCAGTAGG+AGG | + | chr5_3:39874713-39874732 | None:intergenic | 50.0% | |
GGCACGCTCTTAGGAAAGTT+CGG | - | chr5_3:39874813-39874832 | Msa0810930:CDS | 50.0% | |
TGTGTCAGGGAACCATTTGC+AGG | + | chr5_3:39874854-39874873 | None:intergenic | 50.0% | |
TCCTCCTATGAAGCTGTGCA+AGG | - | chr5_3:39874968-39874987 | Msa0810930:intron | 50.0% | |
ACCTTGCACAGCTTCATAGG+AGG | + | chr5_3:39874972-39874991 | None:intergenic | 50.0% | |
ACGCCCAAAATGCTTTCCCT+TGG | + | chr5_3:39875402-39875421 | None:intergenic | 50.0% | |
TATCAGCGATAGCAGCCACT+TGG | + | chr5_3:39875433-39875452 | None:intergenic | 50.0% | |
GGCTGCTATCGCTGATAATC+CGG | - | chr5_3:39875436-39875455 | Msa0810930:intron | 50.0% | |
AGTCTGACAAAGTACGCTGG+TGG | - | chr5_3:39875549-39875568 | Msa0810930:CDS | 50.0% | |
! | CAAGCTCATGGTCTGGTTCA+CGG | + | chr5_3:39875583-39875602 | None:intergenic | 50.0% |
GAACCAGACCATGAGCTTGT+TGG | - | chr5_3:39875584-39875603 | Msa0810930:CDS | 50.0% | |
TTGCCAACAAGCTCATGGTC+TGG | + | chr5_3:39875590-39875609 | None:intergenic | 50.0% | |
! | GTTGCAGTGTGGTTCTGTAG+CGG | - | chr5_3:39875774-39875793 | Msa0810930:intron | 50.0% |
GGAGACAGTTGCATATGACC+TGG | - | chr5_3:39875795-39875814 | Msa0810930:intron | 50.0% | |
AAGGCAATCTGCTGTTGGTG+TGG | + | chr5_3:39876083-39876102 | None:intergenic | 50.0% | |
AACTTCCTTGAGCCACCAAG+AGG | - | chr5_3:39876153-39876172 | Msa0810930:CDS | 50.0% | |
! | TGATACCTCTTGGTGGCTCA+AGG | + | chr5_3:39876161-39876180 | None:intergenic | 50.0% |
TCGACTACTAGGAGAGACCA+AGG | - | chr5_3:39876515-39876534 | Msa0810930:intron | 50.0% | |
! | CTCAGGTTGCGGCAAAAAAG+AGG | - | chr5_3:39876826-39876845 | Msa0810930:CDS | 50.0% |
CGGCAAAAAAGAGGGCTAGA+AGG | - | chr5_3:39876835-39876854 | Msa0810930:CDS | 50.0% | |
CTTCTGGTAAGCGGTAGACA+TGG | + | chr5_3:39876925-39876944 | None:intergenic | 50.0% | |
CGGTGGACAAGATATGAGGA+AGG | + | chr5_3:39877410-39877429 | None:intergenic | 50.0% | |
CTGTCGGTGGACAAGATATG+AGG | + | chr5_3:39877414-39877433 | None:intergenic | 50.0% | |
CTCATATCTTGTCCACCGAC+AGG | - | chr5_3:39877412-39877431 | Msa0810930:CDS | 50.0% | |
!! | ACTGGTGATGATGGACCTGT+CGG | + | chr5_3:39877430-39877449 | None:intergenic | 50.0% |
GCATCCACTCCACCTTTGAT+AGG | + | chr5_3:39877630-39877649 | None:intergenic | 50.0% | |
TGACATGTATGAGCGGCTGA+AGG | - | chr5_3:39877911-39877930 | Msa0810930:CDS | 50.0% | |
ATGAGGTCATCATTTGCCGC+TGG | - | chr5_3:39877949-39877968 | Msa0810930:CDS | 50.0% | |
CCAAGGTATATTCTGGCCAG+CGG | + | chr5_3:39877968-39877987 | None:intergenic | 50.0% | |
ACGGTCTACATGTGCCTATG+TGG | - | chr5_3:39878307-39878326 | Msa0810930:intron | 50.0% | |
ATGTGCCTATGTGGTTCCTG+AGG | - | chr5_3:39878316-39878335 | Msa0810930:intron | 50.0% | |
TATGTGGTTCCTGAGGAGGT+GGG | - | chr5_3:39878323-39878342 | Msa0810930:intron | 50.0% | |
GATGTCGAGCATCCTCTTCA+AGG | + | chr5_3:39878453-39878472 | None:intergenic | 50.0% | |
TGCTCGACATCTTACGTCCA+AGG | - | chr5_3:39878462-39878481 | Msa0810930:CDS | 50.0% | |
! | GGTGCTGTGTTTCCAGCATT+TGG | + | chr5_3:39878524-39878543 | None:intergenic | 50.0% |
AATGCTGGAAACACAGCACC+TGG | - | chr5_3:39878524-39878543 | Msa0810930:CDS | 50.0% | |
GGCTATTGTGGAGAAACTCG+TGG | - | chr5_3:39878604-39878623 | Msa0810930:intron | 50.0% | |
GTCCCAATAACCTCGACAGA+TGG | + | chr5_3:39879220-39879239 | None:intergenic | 50.0% | |
TCGAGGTTATTGGGACCGAA+TGG | - | chr5_3:39879224-39879243 | Msa0810930:CDS | 50.0% | |
CGAGGTTATTGGGACCGAAT+GGG | - | chr5_3:39879225-39879244 | Msa0810930:CDS | 50.0% | |
TTATTGGGACCGAATGGGAC+AGG | - | chr5_3:39879230-39879249 | Msa0810930:CDS | 50.0% | |
CGAACCTCCATGATGCATCT+AGG | + | chr5_3:39879732-39879751 | None:intergenic | 50.0% | |
CGCACTTAGATGGGTCAGAG+AGG | - | chr5_3:39872524-39872543 | Msa0810930:CDS | 55.0% | |
ATGAAAAGTGGCGGCGGTAG+AGG | - | chr5_3:39872868-39872887 | Msa0810930:CDS | 55.0% | |
TGAAAAGTGGCGGCGGTAGA+GGG | - | chr5_3:39872869-39872888 | Msa0810930:CDS | 55.0% | |
AATGTCTCAACCGCCGAGAC+AGG | + | chr5_3:39872952-39872971 | None:intergenic | 55.0% | |
TTGCTCAGATGCCACGGTCT+CGG | - | chr5_3:39873106-39873125 | Msa0810930:CDS | 55.0% | |
TGACGAGGGATCCGGTAATG+AGG | - | chr5_3:39873196-39873215 | Msa0810930:CDS | 55.0% | |
! | CCACAAAATGGGGGTGCACT+CGG | + | chr5_3:39873771-39873790 | None:intergenic | 55.0% |
GCGAGGTGGTTGTGAATTGG+AGG | + | chr5_3:39874133-39874152 | None:intergenic | 55.0% | |
GCGTCTTTGCCTTCACGCTT+GGG | - | chr5_3:39874309-39874328 | Msa0810930:CDS | 55.0% | |
! | CTTCTGGTTGGCACGCTCTT+AGG | - | chr5_3:39874804-39874823 | Msa0810930:CDS | 55.0% |
GGATCCAGGCTGCAACCTAA+TGG | + | chr5_3:39875235-39875254 | None:intergenic | 55.0% | |
TGGGCGTGTTCTTGTCCAAG+TGG | - | chr5_3:39875415-39875434 | Msa0810930:CDS | 55.0% | |
! | TTAACAGCCGGTTCCAAGGC+AGG | + | chr5_3:39876651-39876670 | None:intergenic | 55.0% |
!! | CAGAAACTGGTTTGGGCCTC+AGG | + | chr5_3:39876705-39876724 | None:intergenic | 55.0% |
CCGCTGGCCAGAATATACCT+TGG | - | chr5_3:39877965-39877984 | Msa0810930:CDS | 55.0% | |
TGCCTATGTGGTTCCTGAGG+AGG | - | chr5_3:39878319-39878338 | Msa0810930:intron | 55.0% | |
CACCTCCTCAGGAACCACAT+AGG | + | chr5_3:39878324-39878343 | None:intergenic | 55.0% | |
CTATGTGGTTCCTGAGGAGG+TGG | - | chr5_3:39878322-39878341 | Msa0810930:intron | 55.0% | |
ACTTCGCTAAGTCGCTCACC+AGG | + | chr5_3:39878545-39878564 | None:intergenic | 55.0% | |
TCAATGTGCGCTCTTGGGTC+CGG | - | chr5_3:39879571-39879590 | Msa0810930:intron | 55.0% | |
CGCTCTTGGGTCCGGATTAT+GGG | - | chr5_3:39879579-39879598 | Msa0810930:intron | 55.0% | |
!! | GGAGGCACCTAGATGCATCA+TGG | - | chr5_3:39879722-39879741 | Msa0810930:intron | 55.0% |
GGCACCTAGATGCATCATGG+AGG | - | chr5_3:39879725-39879744 | Msa0810930:intron | 55.0% | |
!! | CGCCAGCGTTGATTCGGAAG+AGG | - | chr5_3:39872999-39873018 | Msa0810930:intron | 60.0% |
TCACTCGCATACCGAGACCG+TGG | + | chr5_3:39873120-39873139 | None:intergenic | 60.0% | |
GCACGGACACTTCGGATCGA+AGG | - | chr5_3:39873512-39873531 | Msa0810930:intron | 60.0% | |
! | CCGAGTGCACCCCCATTTTG+TGG | - | chr5_3:39873768-39873787 | Msa0810930:CDS | 60.0% |
GTGAAGGCAAAGACGCGCAC+AGG | + | chr5_3:39874305-39874324 | None:intergenic | 60.0% | |
CGCGTCTTTGCCTTCACGCT+TGG | - | chr5_3:39874308-39874327 | Msa0810930:CDS | 60.0% | |
ACTGCATCGCCCAAGCGTGA+AGG | + | chr5_3:39874321-39874340 | None:intergenic | 60.0% | |
CGCTTGGGCGATGCAGTGTA+TGG | - | chr5_3:39874324-39874343 | Msa0810930:CDS | 60.0% | |
! | GACGCCATTAGGTTGCAGCC+TGG | - | chr5_3:39875228-39875247 | Msa0810930:intron | 60.0% |
GGAGCTGCATGACTGGATGC+TGG | + | chr5_3:39876630-39876649 | None:intergenic | 60.0% | |
CAAGGCAGGAGCTGCATGAC+TGG | + | chr5_3:39876637-39876656 | None:intergenic | 60.0% | |
CAGTCATGCAGCTCCTGCCT+TGG | - | chr5_3:39876635-39876654 | Msa0810930:CDS | 60.0% | |
TGCAGCTCCTGCCTTGGAAC+CGG | - | chr5_3:39876641-39876660 | Msa0810930:CDS | 60.0% | |
!! | GGTGATGATGGACCTGTCGG+TGG | + | chr5_3:39877427-39877446 | None:intergenic | 60.0% |
GCGCTCTTGGGTCCGGATTA+TGG | - | chr5_3:39879578-39879597 | Msa0810930:intron | 60.0% | |
AGTGGCGGCGGTAGAGGGTG+TGG | - | chr5_3:39872874-39872893 | Msa0810930:CDS | 70.0% | |
GTGGGGCTCGACCCTCCTAC+TGG | - | chr5_3:39874698-39874717 | Msa0810930:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 39872134 | 39880142 | 39872134 | ID=Msa0810930;Name=Msa0810930 |
chr5_3 | mRNA | 39872134 | 39880142 | 39872134 | ID=Msa0810930-mRNA-1;Parent=Msa0810930;Name=Msa0810930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=364|1|1|1|1|1|22|336|1229 |
chr5_3 | exon | 39872134 | 39872622 | 39872134 | ID=Msa0810930-mRNA-1:exon:12171;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39872851 | 39872922 | 39872851 | ID=Msa0810930-mRNA-1:exon:12170;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39873025 | 39873219 | 39873025 | ID=Msa0810930-mRNA-1:exon:12169;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39873645 | 39873845 | 39873645 | ID=Msa0810930-mRNA-1:exon:12168;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39873936 | 39874097 | 39873936 | ID=Msa0810930-mRNA-1:exon:12167;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39874278 | 39874415 | 39874278 | ID=Msa0810930-mRNA-1:exon:12166;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39874545 | 39874650 | 39874545 | ID=Msa0810930-mRNA-1:exon:12165;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39874767 | 39874934 | 39874767 | ID=Msa0810930-mRNA-1:exon:12164;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39875255 | 39875445 | 39875255 | ID=Msa0810930-mRNA-1:exon:12163;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39875539 | 39875763 | 39875539 | ID=Msa0810930-mRNA-1:exon:12162;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39876102 | 39876222 | 39876102 | ID=Msa0810930-mRNA-1:exon:12161;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39876332 | 39876495 | 39876332 | ID=Msa0810930-mRNA-1:exon:12160;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39876612 | 39876725 | 39876612 | ID=Msa0810930-mRNA-1:exon:12159;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39876819 | 39876924 | 39876819 | ID=Msa0810930-mRNA-1:exon:12158;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39877005 | 39877092 | 39877005 | ID=Msa0810930-mRNA-1:exon:12157;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39877287 | 39877592 | 39877287 | ID=Msa0810930-mRNA-1:exon:12156;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39877677 | 39877795 | 39877677 | ID=Msa0810930-mRNA-1:exon:12155;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39877878 | 39878012 | 39877878 | ID=Msa0810930-mRNA-1:exon:12154;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39878104 | 39878175 | 39878104 | ID=Msa0810930-mRNA-1:exon:12153;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39878336 | 39878544 | 39878336 | ID=Msa0810930-mRNA-1:exon:12152;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39878866 | 39879462 | 39878866 | ID=Msa0810930-mRNA-1:exon:12151;Parent=Msa0810930-mRNA-1 |
chr5_3 | exon | 39879731 | 39880142 | 39879731 | ID=Msa0810930-mRNA-1:exon:12150;Parent=Msa0810930-mRNA-1 |
chr5_3 | five_prime_UTR | 39879779 | 39880142 | 39879779 | ID=Msa0810930-mRNA-1:five_prime_utr;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39879731 | 39879778 | 39879731 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39878866 | 39879462 | 39878866 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39878336 | 39878544 | 39878336 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39878104 | 39878175 | 39878104 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39877878 | 39878012 | 39877878 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39877677 | 39877795 | 39877677 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39877287 | 39877592 | 39877287 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39877005 | 39877092 | 39877005 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39876819 | 39876924 | 39876819 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39876612 | 39876725 | 39876612 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39876332 | 39876495 | 39876332 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39876102 | 39876222 | 39876102 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39875539 | 39875763 | 39875539 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39875255 | 39875445 | 39875255 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39874767 | 39874934 | 39874767 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39874545 | 39874650 | 39874545 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39874278 | 39874415 | 39874278 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39873936 | 39874097 | 39873936 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39873645 | 39873845 | 39873645 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39873025 | 39873219 | 39873025 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39872851 | 39872922 | 39872851 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | CDS | 39872470 | 39872622 | 39872470 | ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1 |
chr5_3 | three_prime_UTR | 39872134 | 39872469 | 39872134 | ID=Msa0810930-mRNA-1:three_prime_utr;Parent=Msa0810930-mRNA-1 |
Gene Sequence |
Protein sequence |