AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0810930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0810930 MtrunA17_Chr5g0427251 98.780 1230 14 1 1 1229 1 1230 0.0 2530
Msa0810930 MtrunA17_Chr5g0448351 45.393 1042 492 15 214 1229 207 1197 0.0 902
Msa0810930 MtrunA17_Chr5g0401841 61.667 60 14 2 644 694 4 63 3.20e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0810930 AT4G24610.1 62.648 1186 395 12 47 1229 10 1150 0.0 1495
Msa0810930 AT4G24610.3 62.679 1187 397 12 47 1229 10 1154 0.0 1493
Msa0810930 AT4G24610.4 62.595 1187 395 13 47 1229 10 1151 0.0 1491
Msa0810930 AT4G24610.2 62.626 1188 397 13 47 1229 10 1155 0.0 1489
Msa0810930 AT5G65440.1 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0810930 AT5G65440.8 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0810930 AT5G65440.9 53.846 1014 449 7 229 1229 43 1050 0.0 1136
Msa0810930 AT5G65440.6 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0810930 AT5G65440.4 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0810930 AT5G65440.7 56.550 939 401 4 292 1229 159 1091 0.0 1133
Msa0810930 AT5G65440.3 54.573 973 401 5 292 1229 159 1125 0.0 1114
Msa0810930 AT5G65440.2 53.854 947 416 8 229 1160 43 983 0.0 1044
Msa0810930 AT5G65440.5 56.766 872 368 5 292 1160 159 1024 0.0 1042
Msa0810930 AT5G48310.2 43.744 1031 500 17 221 1229 156 1128 0.0 858
Msa0810930 AT5G48310.1 45.955 927 439 13 314 1229 280 1155 0.0 850

Find 299 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTAATTCTTTAGGTTTA+AGG 0.101745 5_3:-39879830 Msa0810930:five_prime_UTR
GTACTTGATTCTGCTTTATT+TGG 0.141623 5_3:+39878402 None:intergenic
ACAGAGTTTGCTTCATATTA+TGG 0.161719 5_3:-39876359 Msa0810930:CDS
GTAAATAAAGAGGGTTATTA+AGG 0.183967 5_3:-39872428 Msa0810930:three_prime_UTR
CTTCTGGTTGGCACGCTCTT+AGG 0.188615 5_3:-39877450 Msa0810930:CDS
AGCATGGCACCTAAGAAATT+TGG 0.201534 5_3:-39873997 Msa0810930:CDS
GATTCCAAGGGAAAGCATTT+TGG 0.208871 5_3:-39876859 Msa0810930:CDS
CGCGTCTTTGCCTTCACGCT+TGG 0.211183 5_3:-39877946 Msa0810930:CDS
TAGACCGTTTGGCAAGTTTC+TGG 0.237058 5_3:+39873962 None:intergenic
GCTTACTCCTGCTACAAAAT+TGG 0.256730 5_3:+39872366 None:intergenic
GATTCGGAAGAGGAAGTTTA+TGG 0.256978 5_3:-39879245 Msa0810930:CDS
TATTTAAGCCCAAATTTCTT+AGG 0.261853 5_3:+39873988 None:intergenic
TTGCCATCTGTCGAGGTTAT+TGG 0.267012 5_3:-39873040 Msa0810930:CDS
TGCATAAAGCTTAATTCTTT+AGG 0.276770 5_3:-39879837 Msa0810930:five_prime_UTR
CTATTTCCCTTCATGATAAC+AGG 0.279831 5_3:+39876127 None:intergenic
AGTGACACATAAAATTAAAA+TGG 0.285788 5_3:-39877515 Msa0810930:CDS
TCTTGAGTAGAACCACAAAA+TGG 0.289207 5_3:+39878474 None:intergenic
TCCATGGACCATGTAATTCT+AGG 0.298952 5_3:+39876393 None:intergenic
TACCACCACCATCAAAATTT+AGG 0.302751 5_3:-39879355 Msa0810930:CDS
TTAATATGCTCTTCACTTAC+TGG 0.302787 5_3:-39872318 Msa0810930:three_prime_UTR
CATACCTTGCACAGCTTCAT+AGG 0.304708 5_3:+39877282 None:intergenic
TCCATTTGTATATTCTTGTT+TGG 0.307399 5_3:-39874593 Msa0810930:CDS
TCACAGATGCAACAACTTCT+AGG 0.308271 5_3:-39872579 Msa0810930:CDS
ATTCAGAGGTTGGTTCTATT+AGG 0.312085 5_3:-39879783 Msa0810930:five_prime_UTR
TTCACCATTAGCTCCTCTTC+TGG 0.318680 5_3:+39877751 None:intergenic
TAGGTTTAAGGTTTCAAAAT+TGG 0.319415 5_3:-39879818 Msa0810930:five_prime_UTR
AAACCCTGTGCATAAATCTT+AGG 0.320391 5_3:-39875305 Msa0810930:CDS
GCATCCACTCCACCTTTGAT+AGG 0.324289 5_3:+39874627 None:intergenic
TGCCATCTGTCGAGGTTATT+GGG 0.326097 5_3:-39873039 Msa0810930:CDS
CAGAAACTGGTTTGGGCCTC+AGG 0.332585 5_3:+39875552 None:intergenic
ATAAAATAACTTACAACATA+TGG 0.335183 5_3:+39876991 None:intergenic
TTATGGTGGAAGGTATTCTT+TGG 0.335278 5_3:-39879228 Msa0810930:CDS
TCTAGAACCAAGGTATATTC+TGG 0.337993 5_3:+39874282 None:intergenic
ATGATAATCAATCAATCATA+TGG 0.346525 5_3:-39872395 Msa0810930:three_prime_UTR
ATGAAAAGTGGCGGCGGTAG+AGG 0.346916 5_3:-39879386 Msa0810930:CDS
CAGTTTCTGTCACTACTTCC+AGG 0.351135 5_3:-39875538 Msa0810930:intron
AGAAGTTGCAATGAAAGTTC+AGG 0.359320 5_3:-39876432 Msa0810930:CDS
AATGGTGCTGCTAAGAGATA+TGG 0.361058 5_3:-39879176 Msa0810930:CDS
AAATCATCTCCAAGACTATC+TGG 0.365820 5_3:+39876898 None:intergenic
GAGAATAGATCATGGTATAA+AGG 0.367349 5_3:-39872870 Msa0810930:CDS
GCAAAGCTCTGTGCTGTATA+TGG 0.367805 5_3:+39874883 None:intergenic
TGAAAGATCTCTTTGAAAAT+CGG 0.369680 5_3:+39874781 None:intergenic
AAGGCGAGGTGGTTGTGAAT+TGG 0.379609 5_3:+39878121 None:intergenic
GCATGGCACCTAAGAAATTT+GGG 0.379782 5_3:-39873996 Msa0810930:CDS
AAACTGTTGTCCTTGTGATT+AGG 0.380356 5_3:+39872480 None:intergenic
GCAAAGATAGACGTTTATCT+TGG 0.381941 5_3:+39874568 None:intergenic
TTGCAGTCAAAACTATCTTC+TGG 0.383266 5_3:-39877466 Msa0810930:CDS
GCGTCTTTGCCTTCACGCTT+GGG 0.385460 5_3:-39877945 Msa0810930:CDS
TGTGTCAGGGAACCATTTGC+AGG 0.387579 5_3:+39877403 None:intergenic
GGTGCTGTGTTTCCAGCATT+TGG 0.390436 5_3:+39873733 None:intergenic
TATCTGTTCAATTTCGTCCT+TGG 0.391761 5_3:+39875722 None:intergenic
TTGAACTGTGATTCAATCCT+TGG 0.396509 5_3:+39873775 None:intergenic
CTTGATGAGTCATCTTTCTC+TGG 0.397406 5_3:-39875669 Msa0810930:CDS
AAAGTTCAGGAACTACTTGC+AGG 0.398147 5_3:-39873671 Msa0810930:CDS
CAAGGCAGGAGCTGCATGAC+TGG 0.398224 5_3:+39875620 None:intergenic
GAATAATGAAAGCTGTTTGA+TGG 0.399448 5_3:-39875364 Msa0810930:CDS
CTGGAAGTAGTGACAGAAAC+TGG 0.403028 5_3:+39875539 None:intergenic
CTTTGAACATTCATCCTTGA+AGG 0.404054 5_3:+39878879 None:intergenic
CTTTACTTAGAGATGCATTT+GGG 0.409059 5_3:-39877877 Msa0810930:intron
TCGTCCAGAGAAACACTTAC+TGG 0.409705 5_3:-39879092 Msa0810930:CDS
TGTGAATCAGAAACCGTAAT+GGG 0.415519 5_3:+39879966 None:intergenic
TAGCGGTTCAAATAGTGATA+TGG 0.420595 5_3:-39879279 Msa0810930:CDS
TATCTCTTAGCAGCACCATT+GGG 0.421520 5_3:+39879179 None:intergenic
TAGTTGAAGAAGACGCCATT+AGG 0.423070 5_3:-39877037 Msa0810930:CDS
TAAATAAAGAGGGTTATTAA+GGG 0.426330 5_3:-39872427 Msa0810930:three_prime_UTR
TATGGACGCCAGCGTTGATT+CGG 0.426775 5_3:-39879261 Msa0810930:CDS
CGCTTGGGCGATGCAGTGTA+TGG 0.427505 5_3:-39877930 Msa0810930:CDS
GGCACGCTCTTAGGAAAGTT+CGG 0.428629 5_3:-39877441 Msa0810930:CDS
AATTACATGGTCCATGGAAA+TGG 0.428646 5_3:-39876388 Msa0810930:CDS
TTAGCAGCACTCCTCATTAC+CGG 0.429720 5_3:+39879047 None:intergenic
TCTTCCAGTAAGTGTTTCTC+TGG 0.430514 5_3:+39879088 None:intergenic
TCTTTACTTAGAGATGCATT+TGG 0.430566 5_3:-39877878 Msa0810930:CDS
AATACTGTGAAGATAGCTTA+TGG 0.431220 5_3:+39873082 None:intergenic
GTACTTTGAAATCTGTATCC+AGG 0.431525 5_3:-39878383 Msa0810930:CDS
CTTGAGTAGAACCACAAAAT+GGG 0.433325 5_3:+39878475 None:intergenic
GATGTCGAGCATCCTCTTCA+AGG 0.434680 5_3:+39873804 None:intergenic
TGCAGCTCCTGCCTTGGAAC+CGG 0.440849 5_3:-39875613 Msa0810930:CDS
TGTTATTCATTGTAATACTT+TGG 0.442744 5_3:-39872254 Msa0810930:three_prime_UTR
GGCTGCTATCGCTGATAATC+CGG 0.442816 5_3:-39876818 Msa0810930:intron
CATTCCTAAGATTTATGCAC+AGG 0.442823 5_3:+39875301 None:intergenic
GTGGGGCTCGACCCTCCTAC+TGG 0.443564 5_3:-39877556 Msa0810930:CDS
TGATGCTGAGAGCAAAGTTC+AGG 0.447811 5_3:-39873684 Msa0810930:CDS
TGCTAATAAGTTACCTGTCT+CGG 0.449263 5_3:-39879318 Msa0810930:CDS
TGTTCAAAGTTCTGCAGAAA+AGG 0.451148 5_3:-39878865 Msa0810930:intron
AGATCTCGTGATCCGATTAG+TGG 0.452469 5_3:-39879410 Msa0810930:CDS
GTACCACATTTGCCTGCAAA+TGG 0.452983 5_3:-39877415 Msa0810930:CDS
TCAAATCTCGAACCCCATTA+CGG 0.453669 5_3:-39879979 Msa0810930:five_prime_UTR
GAACTACTTGCAGGCTATTG+TGG 0.456163 5_3:-39873662 Msa0810930:CDS
CTCTCTAAGCTTAATATCAA+AGG 0.459245 5_3:-39880046 Msa0810930:five_prime_UTR
TTAACAGCCGGTTCCAAGGC+AGG 0.459389 5_3:+39875606 None:intergenic
ATTCATTGTAATACTTTGGT+AGG 0.459523 5_3:-39872250 Msa0810930:three_prime_UTR
CAGAACTGCTACTGGTTCAG+AGG 0.460004 5_3:-39878156 Msa0810930:CDS
GGATCCAGGCTGCAACCTAA+TGG 0.460520 5_3:+39877022 None:intergenic
AACAGCAGATTGCCTTAACT+TGG 0.461204 5_3:-39876167 Msa0810930:CDS
TTGCTCAGATGCCACGGTCT+CGG 0.463158 5_3:-39879148 Msa0810930:CDS
ATATCTCTTAGCAGCACCAT+TGG 0.463834 5_3:+39879178 None:intergenic
CGAACCTCCATGATGCATCT+AGG 0.464652 5_3:+39872525 None:intergenic
GCAGATTATATACCAAGTTA+AGG 0.465872 5_3:+39876155 None:intergenic
AGTAGTGACAGAAACTGGTT+TGG 0.467102 5_3:+39875544 None:intergenic
AGCAGGGCTTATATGTCAGC+AGG 0.469725 5_3:-39878918 Msa0810930:CDS
AGATGACAATAGTCATCTTA+AGG 0.472987 5_3:-39876611 Msa0810930:intron
CGCTATATACAACAAGTCTC+TGG 0.473262 5_3:-39877349 Msa0810930:CDS
GAACCAGACCATGAGCTTGT+TGG 0.474020 5_3:-39876670 Msa0810930:CDS
GGTGCCATGCTATCTTTAAG+AGG 0.479202 5_3:+39874009 None:intergenic
GATCATGGTATAAAGGTTCA+AGG 0.479291 5_3:-39872863 Msa0810930:CDS
GTAATGAGGAGTGCTGCTAA+TGG 0.479572 5_3:-39879044 Msa0810930:CDS
ATAATCAAAATATACTTCCT+AGG 0.479944 5_3:-39875254 Msa0810930:intron
GCTTCTTGCTTACCAAATGC+TGG 0.480620 5_3:-39873745 Msa0810930:CDS
TTGAATCACAGTTCAAATCA+TGG 0.480727 5_3:-39873768 Msa0810930:CDS
TATATGGAAGCAGAAAGATT+TGG 0.484202 5_3:+39874899 None:intergenic
AGTGGCGGCGGTAGAGGGTG+TGG 0.484699 5_3:-39879380 Msa0810930:CDS
TCCAAACAAGAATATACAAA+TGG 0.484801 5_3:+39874592 None:intergenic
TTACAACATATGGACTTCAC+TGG 0.488136 5_3:+39877001 None:intergenic
TCTTATCAGAATCGACTACT+AGG 0.490024 5_3:-39875750 Msa0810930:intron
TCTCTAAGCTTAATATCAAA+GGG 0.490643 5_3:-39880045 Msa0810930:five_prime_UTR
CAGTCATGCAGCTCCTGCCT+TGG 0.491978 5_3:-39875619 Msa0810930:CDS
CAAGCTCATGGTCTGGTTCA+CGG 0.492655 5_3:+39876674 None:intergenic
TAAATTCAACCCACCTCCTC+AGG 0.493294 5_3:+39873922 None:intergenic
GTACTACGTGTTGCAGAAGT+TGG 0.493392 5_3:+39878426 None:intergenic
ATAGGCACATGTAGACCGTT+TGG 0.494429 5_3:+39873951 None:intergenic
GTTTACTTGCTTAATCAGAA+AGG 0.494637 5_3:+39880018 None:intergenic
GAAGTTGCAATGAAAGTTCA+GGG 0.494648 5_3:-39876431 Msa0810930:CDS
ATTAAGTTACCTGTCCCATT+CGG 0.494879 5_3:+39873015 None:intergenic
CTCATAGCTGTGTTTGAGAA+TGG 0.497727 5_3:+39879431 None:intergenic
TTCAAAGAGATCTTTCAGGC+TGG 0.497753 5_3:-39874775 Msa0810930:CDS
ACGCCCAAAATGCTTTCCCT+TGG 0.498791 5_3:+39876855 None:intergenic
AGCATATTAATCTTGTTCCT+AGG 0.501315 5_3:+39872331 None:intergenic
ATGCTTCTAGTGTACCTTCA+AGG 0.501694 5_3:-39878893 Msa0810930:CDS
TCAACCAGAAGAGGAGCTAA+TGG 0.506702 5_3:-39877755 Msa0810930:CDS
ACAAGGAATGACGAGGGATC+CGG 0.506996 5_3:-39879066 Msa0810930:CDS
GGAGCTGCATGACTGGATGC+TGG 0.507579 5_3:+39875627 None:intergenic
CTTCTTAGTCCTATCAAAGG+TGG 0.511888 5_3:-39874636 Msa0810930:intron
TTGCCAACAAGCTCATGGTC+TGG 0.512703 5_3:+39876667 None:intergenic
ATATGGACTTCACTGGATCC+AGG 0.515067 5_3:+39877008 None:intergenic
GAAGATTCTTCAAGATTCAA+AGG 0.515408 5_3:-39873168 Msa0810930:CDS
CTCATATCTTGTCCACCGAC+AGG 0.515457 5_3:-39874842 Msa0810930:CDS
AGTTCTGCTACTGGTGATGA+TGG 0.517116 5_3:+39874818 None:intergenic
CGAGGTTATTGGGACCGAAT+GGG 0.517152 5_3:-39873029 Msa0810930:CDS
AAGTTGGTGTAACAACTTTG+CGG 0.517995 5_3:-39877318 Msa0810930:CDS
TCGGAAGAGGAAGTTTATGG+TGG 0.518785 5_3:-39879242 Msa0810930:CDS
GCAGTACGCAAAGTCAAAGT+GGG 0.519161 5_3:-39877574 Msa0810930:intron
TGATACCTTGCATGAAATGT+TGG 0.522674 5_3:+39878098 None:intergenic
CAATACACATGTAAATAAAG+AGG 0.523131 5_3:-39872438 Msa0810930:three_prime_UTR
TGAATCACAGTTCAAATCAT+GGG 0.525286 5_3:-39873767 Msa0810930:CDS
TTGGGGACTCTGTTGTCTTG+TGG 0.525829 5_3:+39879197 None:intergenic
AAAACTTATTGGCAAGATGA+AGG 0.526439 5_3:-39877683 Msa0810930:CDS
ATGGTTCTCTAACTTATCCC+TGG 0.527134 5_3:+39878365 None:intergenic
CATTGAAGTTCAAGATTCCA+AGG 0.529687 5_3:-39876872 Msa0810930:CDS
TCGAGGTTATTGGGACCGAA+TGG 0.530623 5_3:-39873030 Msa0810930:CDS
TATATTCATCTGTGTCAGAA+AGG 0.531164 5_3:+39875394 None:intergenic
GTGAAGGCAAAGACGCGCAC+AGG 0.531948 5_3:+39877952 None:intergenic
GTCTCTGGACTCCTAAAAGT+TGG 0.532031 5_3:-39877334 Msa0810930:CDS
TGCGTTCACAGAACTGCTAC+TGG 0.533287 5_3:-39878164 Msa0810930:intron
TAAGCAACTCAACTGCTCCT+AGG 0.533539 5_3:-39872348 Msa0810930:three_prime_UTR
GCTTGCACCTGTTATCATGA+AGG 0.534068 5_3:-39876134 Msa0810930:CDS
TTTCCGAGCTTGCATCTCCA+TGG 0.536492 5_3:+39878346 None:intergenic
AGCTTGTAAAGTTTAACAGC+CGG 0.536736 5_3:+39875594 None:intergenic
ACCTAGAATTACATGGTCCA+TGG 0.537176 5_3:-39876394 Msa0810930:CDS
AAGTTCAGGGCTTTCAGCAA+AGG 0.539878 5_3:-39876418 Msa0810930:CDS
CGCCAGCGTTGATTCGGAAG+AGG 0.540156 5_3:-39879255 Msa0810930:CDS
GAGACAGGTAACTTATTAGC+AGG 0.540938 5_3:+39879320 None:intergenic
GACGCCATTAGGTTGCAGCC+TGG 0.541548 5_3:-39877026 Msa0810930:CDS
CTAGCTAACTGCTCTTTCAG+TGG 0.542632 5_3:+39873107 None:intergenic
AAGTTTAACAGCCGGTTCCA+AGG 0.542939 5_3:+39875602 None:intergenic
GCTGCTAATGGAAGGCAGAA+TGG 0.544705 5_3:-39879032 Msa0810930:CDS
CTGTCGGTGGACAAGATATG+AGG 0.545131 5_3:+39874843 None:intergenic
GCGAGGTGGTTGTGAATTGG+AGG 0.545388 5_3:+39878124 None:intergenic
TATCAGCGATAGCAGCCACT+TGG 0.545567 5_3:+39876824 None:intergenic
GTAGTGACAGAAACTGGTTT+GGG 0.545700 5_3:+39875545 None:intergenic
TAATATGCTCTTCACTTACT+GGG 0.545823 5_3:-39872317 Msa0810930:three_prime_UTR
GCCTTCCAACATTTCATGCA+AGG 0.546520 5_3:-39878103 Msa0810930:intron
CCGCTGGCCAGAATATACCT+TGG 0.546895 5_3:-39874289 Msa0810930:CDS
TACTTTGAAATCTGTATCCA+GGG 0.547378 5_3:-39878382 Msa0810930:CDS
TTATTGGGACCGAATGGGAC+AGG 0.547657 5_3:-39873024 Msa0810930:intron
ATGACTATTGTCATCTGCAC+TGG 0.548196 5_3:+39876618 None:intergenic
ATGGTGCTGCTAAGAGATAT+GGG 0.549903 5_3:-39879175 Msa0810930:CDS
TAGATATCTATCGTATGTCA+TGG 0.550386 5_3:-39876203 Msa0810930:CDS
GTGTGAATCAGAAACCGTAA+TGG 0.552337 5_3:+39879965 None:intergenic
TGATAATCAATCAATCATAT+GGG 0.552944 5_3:-39872394 Msa0810930:three_prime_UTR
TTCCTTCTTAGTCCTATCAA+AGG 0.554631 5_3:-39874639 Msa0810930:intron
AGCTCCTCTTAAAGATAGCA+TGG 0.555560 5_3:-39874013 Msa0810930:CDS
TGATACCTCTTGGTGGCTCA+AGG 0.555917 5_3:+39876096 None:intergenic
TTCCCTGACACATAAAAGCT+TGG 0.559129 5_3:-39877392 Msa0810930:CDS
ACAGAAAAGAGAATAGATCA+TGG 0.559892 5_3:-39872878 Msa0810930:CDS
TCATGATATCTTATCTCCTG+AGG 0.562589 5_3:-39875568 Msa0810930:CDS
CAAGTAGGGAGTAGTATCAA+TGG 0.563189 5_3:-39878954 Msa0810930:CDS
GTTTCTGATTCACACTTCTG+TGG 0.564909 5_3:-39879957 Msa0810930:five_prime_UTR
CTTGCACCTGTTATCATGAA+GGG 0.565811 5_3:-39876133 Msa0810930:CDS
GAACCATTTGCAGGCAAATG+TGG 0.565898 5_3:+39877412 None:intergenic
GAGCTAATGGTGAAATGCAA+TGG 0.566880 5_3:-39877742 Msa0810930:CDS
GGATGATTCGTCGGATTCTG+CGG 0.568196 5_3:-39879000 Msa0810930:CDS
ACGGTCTACATGTGCCTATG+TGG 0.568735 5_3:-39873947 Msa0810930:CDS
ATGTCCAGAAACTTGCCAAA+CGG 0.569380 5_3:-39873966 Msa0810930:CDS
TCATACATGTCATCAACAAA+GGG 0.569455 5_3:+39874354 None:intergenic
CCGATTAGTGGAATGAAAAG+TGG 0.570072 5_3:-39879398 Msa0810930:CDS
TGACGAGGGATCCGGTAATG+AGG 0.570148 5_3:-39879058 Msa0810930:CDS
GTATCTTGCCAACAAGCTCA+TGG 0.570307 5_3:+39876662 None:intergenic
CTCATACATGTCATCAACAA+AGG 0.571246 5_3:+39874353 None:intergenic
AAGAGGAAGTTTATGGTGGA+AGG 0.571425 5_3:-39879238 Msa0810930:CDS
GCAATGACAAGTTCTGCTAC+TGG 0.573441 5_3:+39874809 None:intergenic
TTTCACTGAGGATGATTCGT+CGG 0.574054 5_3:-39879009 Msa0810930:CDS
TGCCTATGTGGTTCCTGAGG+AGG 0.575224 5_3:-39873935 Msa0810930:intron
CAAAGGAACCTAGAATTACA+TGG 0.575331 5_3:-39876401 Msa0810930:CDS
GACATGCTACATCCAGTAGG+AGG 0.575791 5_3:+39877544 None:intergenic
TCTGTCAAGAGCCATTTCCA+TGG 0.578372 5_3:+39876377 None:intergenic
TGAAAAGTGGCGGCGGTAGA+GGG 0.579262 5_3:-39879385 Msa0810930:CDS
GGAAACATTGACAGACTATG+AGG 0.579854 5_3:-39874322 Msa0810930:CDS
ATGAGGTCATCATTTGCCGC+TGG 0.580095 5_3:-39874305 Msa0810930:CDS
TGCAGTACGCAAAGTCAAAG+TGG 0.581751 5_3:-39877575 Msa0810930:intron
GAACCATGGAGATGCAAGCT+CGG 0.582420 5_3:-39878349 Msa0810930:CDS
TTGACTGCAAATTTGAGAAG+TGG 0.583581 5_3:+39877479 None:intergenic
ATCTTTCTCTGGAATCGTCG+AGG 0.584965 5_3:-39875658 Msa0810930:CDS
AATACACATGTAAATAAAGA+GGG 0.585161 5_3:-39872437 Msa0810930:three_prime_UTR
AGTCAAAACTATCTTCTGGT+TGG 0.585669 5_3:-39877462 Msa0810930:CDS
TGATATTGAGAAGGCGATTG+TGG 0.585814 5_3:-39874067 Msa0810930:CDS
GTCCCAATAACCTCGACAGA+TGG 0.586762 5_3:+39873037 None:intergenic
GGAGGCACCTAGATGCATCA+TGG 0.587292 5_3:-39872532 Msa0810930:CDS
TCCTCCTATGAAGCTGTGCA+AGG 0.588239 5_3:-39877286 Msa0810930:intron
TGCTCGACATCTTACGTCCA+AGG 0.589561 5_3:-39873792 Msa0810930:CDS
AGTGCTTCTTCAACCAGAAG+AGG 0.591826 5_3:-39877764 Msa0810930:CDS
TGGAAGCAGAAAGATTTGGC+AGG 0.594188 5_3:+39874903 None:intergenic
TTCCTCTTCCGAATCAACGC+TGG 0.594375 5_3:+39879253 None:intergenic
TGAGGAGTGCTGCTAATGGA+AGG 0.594622 5_3:-39879040 Msa0810930:CDS
AAGTTAAGGCAATCTGCTGT+TGG 0.596013 5_3:+39876169 None:intergenic
CAATGGAGAACTTTCTAGTG+AGG 0.596450 5_3:-39877725 Msa0810930:CDS
AAATAAAGAGGGTTATTAAG+GGG 0.598297 5_3:-39872426 Msa0810930:three_prime_UTR
TCATTGCAACTTCTAGAACC+AGG 0.599580 5_3:+39876441 None:intergenic
TAGTCCTATCAAAGGTGGAG+TGG 0.600358 5_3:-39874631 Msa0810930:CDS
CTTCTGGTAAGCGGTAGACA+TGG 0.603040 5_3:+39875332 None:intergenic
TTGAGTAGAACCACAAAATG+GGG 0.603689 5_3:+39878476 None:intergenic
AATGCTGGAAACACAGCACC+TGG 0.603796 5_3:-39873730 Msa0810930:CDS
GATACTACTCCCTACTTGTG+TGG 0.604286 5_3:+39878959 None:intergenic
GGCAATAGCTGATATTGAGA+AGG 0.610931 5_3:-39874076 Msa0810930:CDS
GGAATGTTGCTCAGATGCCA+CGG 0.611258 5_3:-39879154 Msa0810930:CDS
ACCTTGCACAGCTTCATAGG+AGG 0.612295 5_3:+39877285 None:intergenic
CTGGAAGACAAGGAATGACG+AGG 0.612503 5_3:-39879073 Msa0810930:CDS
ATCATGGTATAAAGGTTCAA+GGG 0.614850 5_3:-39872862 Msa0810930:CDS
ATGTCGATGATACCTCTTGG+TGG 0.614897 5_3:+39876089 None:intergenic
AGCTTTAGATAAACAGTATG+CGG 0.619900 5_3:-39874043 Msa0810930:CDS
ACTGCATCGCCCAAGCGTGA+AGG 0.619920 5_3:+39877936 None:intergenic
GGCTATTGTGGAGAAACTCG+TGG 0.621189 5_3:-39873650 Msa0810930:CDS
ATGTGCCTATGTGGTTCCTG+AGG 0.623485 5_3:-39873938 Msa0810930:CDS
CACCTCCTCAGGAACCACAT+AGG 0.624978 5_3:+39873933 None:intergenic
CGCACTTAGATGGGTCAGAG+AGG 0.625042 5_3:-39879730 Msa0810930:intron
ATTGAAGTTCAAGATTCCAA+GGG 0.625316 5_3:-39876871 Msa0810930:CDS
ATTCCTAAGATTTATGCACA+GGG 0.625437 5_3:+39875302 None:intergenic
TTAGGTAAGATGTTCACTGA+AGG 0.629124 5_3:-39879765 Msa0810930:exon
AATGGAGAACTTTCTAGTGA+GGG 0.631445 5_3:-39877724 Msa0810930:CDS
GAAACACTTACTGGAAGACA+AGG 0.633456 5_3:-39879083 Msa0810930:CDS
GAACTTTGCTCTCAGCATCA+CGG 0.635566 5_3:+39873687 None:intergenic
AGTGGAATGAAAAGTGGCGG+CGG 0.636709 5_3:-39879392 Msa0810930:CDS
TCAAGATTCAAAGGAAACAG+TGG 0.637389 5_3:-39873159 Msa0810930:CDS
ATCTCTTAGCAGCACCATTG+GGG 0.638124 5_3:+39879180 None:intergenic
AGGGATAAGTTAGAGAACCA+TGG 0.640988 5_3:-39878363 Msa0810930:CDS
CTGAGATTTATACGAAGCTG+AGG 0.642228 5_3:-39876331 Msa0810930:intron
CGAGTCGTGCAAATTAGACA+AGG 0.642662 5_3:-39874544 Msa0810930:intron
AGAACTGCTACTGGTTCAGA+GGG 0.643693 5_3:-39878155 Msa0810930:CDS
ACTGGTGATGATGGACCTGT+CGG 0.643984 5_3:+39874827 None:intergenic
TGCGATACAAGAGAAAGACA+TGG 0.645035 5_3:-39872553 Msa0810930:CDS
TCGACTACTAGGAGAGACCA+AGG 0.647615 5_3:-39875739 Msa0810930:CDS
GATGACATGCTACATCCAGT+AGG 0.652898 5_3:+39877541 None:intergenic
GCATGAAATGTTGGAAGGCG+AGG 0.653114 5_3:+39878107 None:intergenic
GGAGACAGTTGCATATGACC+TGG 0.654916 5_3:-39876459 Msa0810930:CDS
AGTCTGACAAAGTACGCTGG+TGG 0.654966 5_3:-39876705 Msa0810930:CDS
TAAGCGGTAGACATGGTCAA+AGG 0.655113 5_3:+39875339 None:intergenic
AACTTCCTTGAGCCACCAAG+AGG 0.658392 5_3:-39876101 Msa0810930:intron
GGTGATGATGGACCTGTCGG+TGG 0.659135 5_3:+39874830 None:intergenic
TAGAAGTTGTTGCATCTGTG+AGG 0.659849 5_3:+39872581 None:intergenic
TAAAGACGCTCCTAATCACA+AGG 0.660476 5_3:-39872490 Msa0810930:CDS
TGGAAGGTTATCTGATGACG+AGG 0.662168 5_3:-39878520 Msa0810930:CDS
ATTGGCAAGATGAAGGTGCA+AGG 0.662707 5_3:-39877676 Msa0810930:intron
TGACATGTATGAGCGGCTGA+AGG 0.662731 5_3:-39874343 Msa0810930:CDS
ACCTTGCATGAAATGTTGGA+AGG 0.664073 5_3:+39878102 None:intergenic
CGGTGGACAAGATATGAGGA+AGG 0.664141 5_3:+39874847 None:intergenic
AAGGCAATCTGCTGTTGGTG+TGG 0.664226 5_3:+39876174 None:intergenic
ACATGCTACATCCAGTAGGA+GGG 0.666417 5_3:+39877545 None:intergenic
CAGTACGCAAAGTCAAAGTG+GGG 0.672704 5_3:-39877573 Msa0810930:CDS
TGGGCGTGTTCTTGTCCAAG+TGG 0.675367 5_3:-39876839 Msa0810930:CDS
CCAAGGTATATTCTGGCCAG+CGG 0.676002 5_3:+39874289 None:intergenic
ATTAGTGGAATGAAAAGTGG+CGG 0.676114 5_3:-39879395 Msa0810930:CDS
AACAGTCTGACAAAGTACGC+TGG 0.679236 5_3:-39876708 Msa0810930:intron
TGGAAGACAAGGAATGACGA+GGG 0.680604 5_3:-39879072 Msa0810930:CDS
GTGAATCAGAAACCGTAATG+GGG 0.680830 5_3:+39879967 None:intergenic
GTTGCAGTGTGGTTCTGTAG+CGG 0.681208 5_3:-39876480 Msa0810930:intron
TATGCAATTACTGCATACCA+TGG 0.685741 5_3:+39877980 None:intergenic
GCAGGGCTTATATGTCAGCA+GGG 0.687674 5_3:-39878917 Msa0810930:CDS
GCGGTTGAGACATTCGATAG+CGG 0.689985 5_3:-39879296 Msa0810930:CDS
CCACCATCAAAATTTAGGAG+TGG 0.694173 5_3:-39879350 Msa0810930:CDS
CAAGACAACAGAGTCCCCAA+TGG 0.694596 5_3:-39879194 Msa0810930:CDS
ATGGTATAAAGGTTCAAGGG+TGG 0.698357 5_3:-39872859 Msa0810930:CDS
TTGTTGATGACATGTATGAG+CGG 0.713232 5_3:-39874350 Msa0810930:CDS
TGAAATGTTGGAAGGCGAGG+TGG 0.713600 5_3:+39878110 None:intergenic
TGAGTAGAACCACAAAATGG+GGG 0.718280 5_3:+39878477 None:intergenic
TCACTCGCATACCGAGACCG+TGG 0.723475 5_3:+39879137 None:intergenic
GGCACCTAGATGCATCATGG+AGG 0.732994 5_3:-39872529 Msa0810930:CDS
TAATAAGTTACCTGTCTCGG+CGG 0.736229 5_3:-39879315 Msa0810930:CDS
AGAGATAAGACAAACTAACG+AGG 0.762301 5_3:-39878454 Msa0810930:CDS
GATACAAGAGAAAGACATGG+AGG 0.786579 5_3:-39872550 Msa0810930:CDS
AAGGCAGAATGGTTTCACTG+AGG 0.797068 5_3:-39879021 Msa0810930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTATGAAAAATTATT+GGG + chr5_3:39873425-39873444 None:intergenic 10.0%
!!! AATTTTGTATGAAAAATTAT+TGG + chr5_3:39873426-39873445 None:intergenic 10.0%
!! TATTATTACAATTTACTAAT+TGG - chr5_3:39876768-39876787 Msa0810930:intron 10.0%
!! GATTATATAAATACTTAAAT+TGG + chr5_3:39877179-39877198 None:intergenic 10.0%
!!! ATACAAAATTTTCTCAATTT+TGG - chr5_3:39873436-39873455 Msa0810930:intron 15.0%
!! AAACTTATACAATTGAAAAA+TGG + chr5_3:39875118-39875137 None:intergenic 15.0%
!! ATAAAATAACTTACAACATA+TGG + chr5_3:39875266-39875285 None:intergenic 15.0%
!! AAATGCAATAAAAATATTAC+CGG + chr5_3:39875458-39875477 None:intergenic 15.0%
!! AGACAATAAAATGATATATT+AGG + chr5_3:39875749-39875768 None:intergenic 15.0%
!! TAATAAATTAATATTTCAGC+AGG + chr5_3:39875973-39875992 None:intergenic 15.0%
!!! CTTTAAAAATATAATGAAAG+TGG + chr5_3:39876233-39876252 None:intergenic 15.0%
!!! ATTTTTTGTCTTATCTAATA+CGG - chr5_3:39876468-39876487 Msa0810930:CDS 15.0%
!!! ACTCTTTTTCTATATTATAA+TGG - chr5_3:39877734-39877753 Msa0810930:CDS 15.0%
!!! CTCTTTTTCTATATTATAAT+GGG - chr5_3:39877735-39877754 Msa0810930:CDS 15.0%
!!! AAAAAAAAAAGATCTTCTTT+TGG - chr5_3:39878362-39878381 Msa0810930:CDS 15.0%
!!! TTATATATTTCTTATTTGAC+AGG - chr5_3:39879332-39879351 Msa0810930:CDS 15.0%
!!! AATATATAGTTTTACTAGAT+TGG - chr5_3:39880027-39880046 Msa0810930:five_prime_UTR 15.0%
!!! TAATTTATTCTTCATTTTGA+TGG - chr5_3:39880088-39880107 Msa0810930:five_prime_UTR 15.0%
!! TTGCATAAAACATGAAAAAA+CGG + chr5_3:39872569-39872588 None:intergenic 20.0%
!!! TTTTTCATGTTTTATGCAAA+TGG - chr5_3:39872570-39872589 Msa0810930:CDS 20.0%
!!! TTTTCATGTTTTATGCAAAT+GGG - chr5_3:39872571-39872590 Msa0810930:CDS 20.0%
!!! ATATACCAATGTAGTTATTT+TGG + chr5_3:39872740-39872759 None:intergenic 20.0%
!! TATATTAGCATATATGCTTA+AGG + chr5_3:39874224-39874243 None:intergenic 20.0%
!! AGTGACACATAAAATTAAAA+TGG - chr5_3:39874739-39874758 Msa0810930:intron 20.0%
!!! ATATCATTTTATTGTCTTTG+TGG - chr5_3:39875752-39875771 Msa0810930:intron 20.0%
!! TAAAAATCGTATGTTGTATA+TGG + chr5_3:39876417-39876436 None:intergenic 20.0%
!! TTAACAACTAATATTATCTC+AGG - chr5_3:39876809-39876828 Msa0810930:intron 20.0%
!! ATAATCAAAATATACTTCCT+AGG - chr5_3:39877000-39877019 Msa0810930:intron 20.0%
!!! TTTCTTTTCTCAAACATATA+AGG - chr5_3:39877027-39877046 Msa0810930:CDS 20.0%
!!! TATTGTTAATGGTTCTAATA+TGG - chr5_3:39877297-39877316 Msa0810930:CDS 20.0%
!! ATTCTTCGATTACATAATTA+GGG + chr5_3:39877556-39877575 None:intergenic 20.0%
!! AATTCTTCGATTACATAATT+AGG + chr5_3:39877557-39877576 None:intergenic 20.0%
!!! TATTATAATGGGTTTTTTGA+AGG - chr5_3:39877746-39877765 Msa0810930:CDS 20.0%
!! GATAGTAAGAAAATAGAATT+TGG + chr5_3:39878062-39878081 None:intergenic 20.0%
!! AATTTAATATTTGATACCCT+TGG - chr5_3:39878662-39878681 Msa0810930:intron 20.0%
!!! TTTAGATGTAATGAGTTTTA+TGG - chr5_3:39879300-39879319 Msa0810930:CDS 20.0%
!! AATACACATGTAAATAAAGA+GGG - chr5_3:39879817-39879836 Msa0810930:five_prime_UTR 20.0%
!! TAAATAAAGAGGGTTATTAA+GGG - chr5_3:39879827-39879846 Msa0810930:five_prime_UTR 20.0%
!! ATGATAATCAATCAATCATA+TGG - chr5_3:39879859-39879878 Msa0810930:five_prime_UTR 20.0%
!! TGATAATCAATCAATCATAT+GGG - chr5_3:39879860-39879879 Msa0810930:five_prime_UTR 20.0%
!! TGTTATTCATTGTAATACTT+TGG - chr5_3:39880000-39880019 Msa0810930:five_prime_UTR 20.0%
!!! GTTTTTTTTTTATCTGTGTG+TGG - chr5_3:39872161-39872180 Msa0810930:three_prime_UTR 25.0%
! TCTCTAAGCTTAATATCAAA+GGG - chr5_3:39872209-39872228 Msa0810930:three_prime_UTR 25.0%
! ATTTGAGAGAGAGAAAAAAA+GGG + chr5_3:39872261-39872280 None:intergenic 25.0%
!!! AATGAAATTTTGAGGGTTTT+TGG + chr5_3:39872345-39872364 None:intergenic 25.0%
!! AAACGTGAATGAAATTTTGA+GGG + chr5_3:39872352-39872371 None:intergenic 25.0%
!! TAAACGTGAATGAAATTTTG+AGG + chr5_3:39872353-39872372 None:intergenic 25.0%
! TGCATAAAGCTTAATTCTTT+AGG - chr5_3:39872417-39872436 Msa0810930:three_prime_UTR 25.0%
!! AGCTTAATTCTTTAGGTTTA+AGG - chr5_3:39872424-39872443 Msa0810930:three_prime_UTR 25.0%
!! TAGGTTTAAGGTTTCAAAAT+TGG - chr5_3:39872436-39872455 Msa0810930:three_prime_UTR 25.0%
! TCGCAACTTTACAAATAATA+AGG + chr5_3:39872611-39872630 None:intergenic 25.0%
! GTGTTTGATTGTTAATTAGA+AGG - chr5_3:39872795-39872814 Msa0810930:intron 25.0%
! TATTTGAATGTAACTACATG+TGG + chr5_3:39873577-39873596 None:intergenic 25.0%
! TGCATGTTTATGTATAAAGA+AGG + chr5_3:39873993-39874012 None:intergenic 25.0%
!! CATTCATTTTCCAAAAACAT+TGG + chr5_3:39874355-39874374 None:intergenic 25.0%
! TAAATTACATGAACACTTGA+AGG + chr5_3:39874443-39874462 None:intergenic 25.0%
!!! CCAATAAGTTTTTTCAGTTT+AGG + chr5_3:39874563-39874582 None:intergenic 25.0%
! CCTAAACTGAAAAAACTTAT+TGG - chr5_3:39874560-39874579 Msa0810930:CDS 25.0%
!! TTTTTATTATCCATGCCTTA+AGG - chr5_3:39875025-39875044 Msa0810930:intron 25.0%
!! TTTTATTATCCATGCCTTAA+GGG - chr5_3:39875026-39875045 Msa0810930:intron 25.0%
! AATATAATTCACCATTATGC+TGG - chr5_3:39875299-39875318 Msa0810930:CDS 25.0%
! AATATATTCAACCAGCATAA+TGG + chr5_3:39875313-39875332 None:intergenic 25.0%
! ATGTATTATGCATTTGCTTT+AGG - chr5_3:39875694-39875713 Msa0810930:CDS 25.0%
! GGATTAACAGTTTAATTAAG+TGG + chr5_3:39876386-39876405 None:intergenic 25.0%
!!! TACAACATACGATTTTTAGT+TGG - chr5_3:39876419-39876438 Msa0810930:CDS 25.0%
! TTATCTAATACGGTTCAATT+CGG - chr5_3:39876478-39876497 Msa0810930:intron 25.0%
! GCAGTTCATAATTAAGAATT+CGG - chr5_3:39877059-39877078 Msa0810930:CDS 25.0%
! AAGTAAGAACATGTGATAAT+AGG - chr5_3:39877205-39877224 Msa0810930:intron 25.0%
! ACTTTCACATGTTACAAATA+AGG + chr5_3:39877248-39877267 None:intergenic 25.0%
! CAAGCTACTATTATTGTTAA+TGG - chr5_3:39877286-39877305 Msa0810930:intron 25.0%
!! TGAAAGATCTCTTTGAAAAT+CGG + chr5_3:39877476-39877495 None:intergenic 25.0%
!!! ACTAATTTTAGTATGTGACT+AGG - chr5_3:39877523-39877542 Msa0810930:CDS 25.0%
! TCCATTTGTATATTCTTGTT+TGG - chr5_3:39877661-39877680 Msa0810930:intron 25.0%
! TCCAAACAAGAATATACAAA+TGG + chr5_3:39877665-39877684 None:intergenic 25.0%
!! CTTTTAAACTAATCATGTGT+TGG - chr5_3:39877772-39877791 Msa0810930:CDS 25.0%
! TACAAGACAATATATCACTT+AGG + chr5_3:39877807-39877826 None:intergenic 25.0%
! CTGAAAAAATAAATGATGAC+AGG - chr5_3:39878157-39878176 Msa0810930:intron 25.0%
! TATTTAAGCCCAAATTTCTT+AGG + chr5_3:39878269-39878288 None:intergenic 25.0%
! CTTACAATAACCTTTACATT+GGG + chr5_3:39878829-39878848 None:intergenic 25.0%
! CAATGTAAAGGTTATTGTAA+GGG - chr5_3:39878828-39878847 Msa0810930:intron 25.0%
! GCTACTAATGCTATTAAATT+TGG - chr5_3:39878893-39878912 Msa0810930:CDS 25.0%
! GATTAATTTACTAACTATGC+TGG + chr5_3:39878991-39879010 None:intergenic 25.0%
! ACATCTAAAAAGATACTACA+TGG + chr5_3:39879289-39879308 None:intergenic 25.0%
! TTTATTATGTGTGCAATACA+AGG - chr5_3:39879462-39879481 Msa0810930:intron 25.0%
! CAATACACATGTAAATAAAG+AGG - chr5_3:39879816-39879835 Msa0810930:five_prime_UTR 25.0%
! GTAAATAAAGAGGGTTATTA+AGG - chr5_3:39879826-39879845 Msa0810930:five_prime_UTR 25.0%
! AAATAAAGAGGGTTATTAAG+GGG - chr5_3:39879828-39879847 Msa0810930:five_prime_UTR 25.0%
! ATTCATTGTAATACTTTGGT+AGG - chr5_3:39880004-39880023 Msa0810930:five_prime_UTR 25.0%
CTCTCTAAGCTTAATATCAA+AGG - chr5_3:39872208-39872227 Msa0810930:three_prime_UTR 30.0%
GTTTACTTGCTTAATCAGAA+AGG + chr5_3:39872239-39872258 None:intergenic 30.0%
GATTTGAGAGAGAGAAAAAA+AGG + chr5_3:39872262-39872281 None:intergenic 30.0%
TTCTGCCAAAATAACTACAT+TGG - chr5_3:39872732-39872751 Msa0810930:intron 30.0%
! AATTTTCTACCACACAAGTA+GGG - chr5_3:39873286-39873305 Msa0810930:intron 30.0%
TCACTTTCACACATTGTTAT+TGG - chr5_3:39873599-39873618 Msa0810930:intron 30.0%
ATAGCACAAATCACAAAGTT+AGG + chr5_3:39873700-39873719 None:intergenic 30.0%
! GTACTTGATTCTGCTTTATT+TGG + chr5_3:39873855-39873874 None:intergenic 30.0%
!! TACTTTGAAATCTGTATCCA+GGG - chr5_3:39873872-39873891 Msa0810930:intron 30.0%
GTTAAGAACTCAATATTGAG+AGG + chr5_3:39873971-39873990 None:intergenic 30.0%
TCTTTACTTAGAGATGCATT+TGG - chr5_3:39874376-39874395 Msa0810930:CDS 30.0%
CTTTACTTAGAGATGCATTT+GGG - chr5_3:39874377-39874396 Msa0810930:CDS 30.0%
AAAACTTATTGGCAAGATGA+AGG - chr5_3:39874571-39874590 Msa0810930:CDS 30.0%
! AAGTTGTTACACCAACTTTT+AGG + chr5_3:39874934-39874953 None:intergenic 30.0%
TTTATTATCCATGCCTTAAG+GGG - chr5_3:39875027-39875046 Msa0810930:intron 30.0%
ATTGAAGTTCAAGATTCCAA+GGG - chr5_3:39875383-39875402 Msa0810930:CDS 30.0%
AGATGACAATAGTCATCTTA+AGG - chr5_3:39875643-39875662 Msa0810930:CDS 30.0%
! ACAGAGTTTGCTTCATATTA+TGG - chr5_3:39875895-39875914 Msa0810930:intron 30.0%
TAGATATCTATCGTATGTCA+TGG - chr5_3:39876051-39876070 Msa0810930:intron 30.0%
GCAGATTATATACCAAGTTA+AGG + chr5_3:39876102-39876121 None:intergenic 30.0%
TTAAACTGTTAATCCAAGCA+TGG - chr5_3:39876391-39876410 Msa0810930:CDS 30.0%
! ACTAATATTATCTCAGGTTG+CGG - chr5_3:39876815-39876834 Msa0810930:intron 30.0%
TATATTCATCTGTGTCAGAA+AGG + chr5_3:39876863-39876882 None:intergenic 30.0%
GAATAATGAAAGCTGTTTGA+TGG - chr5_3:39876890-39876909 Msa0810930:CDS 30.0%
ATTCCTAAGATTTATGCACA+GGG + chr5_3:39876955-39876974 None:intergenic 30.0%
TTGAGAAAAGAAAGATACCT+AGG + chr5_3:39877020-39877039 None:intergenic 30.0%
TATATGGAAGCAGAAAGATT+TGG + chr5_3:39877358-39877377 None:intergenic 30.0%
! GATTTTCAAAGAGATCTTTC+AGG - chr5_3:39877475-39877494 Msa0810930:CDS 30.0%
!!! TCTAAATGCTTTGCTTTTTC+AGG - chr5_3:39877839-39877858 Msa0810930:intron 30.0%
TCATACATGTCATCAACAAA+GGG + chr5_3:39877903-39877922 None:intergenic 30.0%
!!! ACATACATTTTCTAGAACCA+AGG + chr5_3:39877985-39878004 None:intergenic 30.0%
AAAAAGAAAAATGCAGGATG+AGG + chr5_3:39878019-39878038 None:intergenic 30.0%
AATGGGAAAAAGAAAAATGC+AGG + chr5_3:39878025-39878044 None:intergenic 30.0%
! TGGCAACATCTAAAACAAAT+GGG + chr5_3:39878042-39878061 None:intergenic 30.0%
! TTGGCAACATCTAAAACAAA+TGG + chr5_3:39878043-39878062 None:intergenic 30.0%
GAAGAATACAAGTTTAACTC+TGG - chr5_3:39878123-39878142 Msa0810930:CDS 30.0%
!! AGCTTTAGATAAACAGTATG+CGG - chr5_3:39878211-39878230 Msa0810930:intron 30.0%
! TTCTTTTGAATTCCTTGAAG+AGG - chr5_3:39878438-39878457 Msa0810930:CDS 30.0%
TTGAATCACAGTTCAAATCA+TGG - chr5_3:39878486-39878505 Msa0810930:CDS 30.0%
TGAATCACAGTTCAAATCAT+GGG - chr5_3:39878487-39878506 Msa0810930:CDS 30.0%
!! TATTCTGAAACCCAATGTAA+AGG - chr5_3:39878816-39878835 Msa0810930:intron 30.0%
CCTTACAATAACCTTTACAT+TGG + chr5_3:39878830-39878849 None:intergenic 30.0%
CCAATGTAAAGGTTATTGTA+AGG - chr5_3:39878827-39878846 Msa0810930:intron 30.0%
TAATAGCATTAGTAGCAATG+TGG + chr5_3:39878889-39878908 None:intergenic 30.0%
GAAGATTCTTCAAGATTCAA+AGG - chr5_3:39879086-39879105 Msa0810930:CDS 30.0%
AATACTGTGAAGATAGCTTA+TGG + chr5_3:39879175-39879194 None:intergenic 30.0%
! CAGGTAACTTAATTTTCTTC+TGG - chr5_3:39879249-39879268 Msa0810930:CDS 30.0%
TAAAAAGATACTACATGGCA+AGG + chr5_3:39879284-39879303 None:intergenic 30.0%
!!! ACAGGAAATTTTGAGTTTCT+TGG - chr5_3:39879350-39879369 Msa0810930:CDS 30.0%
ACAGAAAAGAGAATAGATCA+TGG - chr5_3:39879376-39879395 Msa0810930:CDS 30.0%
GAGAATAGATCATGGTATAA+AGG - chr5_3:39879384-39879403 Msa0810930:CDS 30.0%
ATCATGGTATAAAGGTTCAA+GGG - chr5_3:39879392-39879411 Msa0810930:CDS 30.0%
AACCTCTGCTTAATTACTTA+AGG - chr5_3:39879435-39879454 Msa0810930:CDS 30.0%
AGCATATTAATCTTGTTCCT+AGG + chr5_3:39879926-39879945 None:intergenic 30.0%
TTAATATGCTCTTCACTTAC+TGG - chr5_3:39879936-39879955 Msa0810930:five_prime_UTR 30.0%
TAATATGCTCTTCACTTACT+GGG - chr5_3:39879937-39879956 Msa0810930:five_prime_UTR 30.0%
TGTGAATCAGAAACCGTAAT+GGG + chr5_3:39872291-39872310 None:intergenic 35.0%
!! ATTCAGAGGTTGGTTCTATT+AGG - chr5_3:39872471-39872490 Msa0810930:CDS 35.0%
TTAGGTAAGATGTTCACTGA+AGG - chr5_3:39872489-39872508 Msa0810930:CDS 35.0%
TTGACAAAAACGCACTTAGA+TGG - chr5_3:39872514-39872533 Msa0810930:CDS 35.0%
TGACAAAAACGCACTTAGAT+GGG - chr5_3:39872515-39872534 Msa0810930:CDS 35.0%
!! CCACTTTTCATTCCACTAAT+CGG + chr5_3:39872859-39872878 None:intergenic 35.0%
ATTAGTGGAATGAAAAGTGG+CGG - chr5_3:39872859-39872878 Msa0810930:CDS 35.0%
TACCACCACCATCAAAATTT+AGG - chr5_3:39872899-39872918 Msa0810930:CDS 35.0%
! TGACCACTCCTAAATTTTGA+TGG + chr5_3:39872910-39872929 None:intergenic 35.0%
TGCTAATAAGTTACCTGTCT+CGG - chr5_3:39872936-39872955 Msa0810930:intron 35.0%
TAGCGGTTCAAATAGTGATA+TGG - chr5_3:39872975-39872994 Msa0810930:intron 35.0%
!! TTATGGTGGAAGGTATTCTT+TGG - chr5_3:39873026-39873045 Msa0810930:CDS 35.0%
! GAATTTTCTACCACACAAGT+AGG - chr5_3:39873285-39873304 Msa0810930:intron 35.0%
CTTTGAACATTCATCCTTGA+AGG + chr5_3:39873378-39873397 None:intergenic 35.0%
TGTTCAAAGTTCTGCAGAAA+AGG - chr5_3:39873389-39873408 Msa0810930:intron 35.0%
GAATGAAATACTACGTAGCA+CGG - chr5_3:39873495-39873514 Msa0810930:intron 35.0%
GATATTTCACCTATGAAGCA+CGG + chr5_3:39873663-39873682 None:intergenic 35.0%
GCTTCATAGGTGAAATATCT+TGG - chr5_3:39873664-39873683 Msa0810930:CDS 35.0%
! TGCTATGAGAATTTTCAGAG+TGG - chr5_3:39873714-39873733 Msa0810930:CDS 35.0%
! ATGAGAATTTTCAGAGTGGA+AGG - chr5_3:39873718-39873737 Msa0810930:CDS 35.0%
TTGAGTAGAACCACAAAATG+GGG + chr5_3:39873781-39873800 None:intergenic 35.0%
CTTGAGTAGAACCACAAAAT+GGG + chr5_3:39873782-39873801 None:intergenic 35.0%
TCTTGAGTAGAACCACAAAA+TGG + chr5_3:39873783-39873802 None:intergenic 35.0%
AGAGATAAGACAAACTAACG+AGG - chr5_3:39873800-39873819 Msa0810930:CDS 35.0%
!! GTACTTTGAAATCTGTATCC+AGG - chr5_3:39873871-39873890 Msa0810930:intron 35.0%
TGATACCTTGCATGAAATGT+TGG + chr5_3:39874159-39874178 None:intergenic 35.0%
! TGAATTCTTTTCAGTGCTCT+TGG - chr5_3:39874250-39874269 Msa0810930:intron 35.0%
! GAATTCTTTTCAGTGCTCTT+GGG - chr5_3:39874251-39874270 Msa0810930:intron 35.0%
TATGCAATTACTGCATACCA+TGG + chr5_3:39874277-39874296 None:intergenic 35.0%
! TATGGAAGCTCCAATGTTTT+TGG - chr5_3:39874342-39874361 Msa0810930:CDS 35.0%
! AATGGAGAACTTTCTAGTGA+GGG - chr5_3:39874530-39874549 Msa0810930:intron 35.0%
ATGTCACAAAAGACTCACTA+TGG + chr5_3:39874649-39874668 None:intergenic 35.0%
TTGACTGCAAATTTGAGAAG+TGG + chr5_3:39874778-39874797 None:intergenic 35.0%
TTGCAGTCAAAACTATCTTC+TGG - chr5_3:39874788-39874807 Msa0810930:CDS 35.0%
AGTCAAAACTATCTTCTGGT+TGG - chr5_3:39874792-39874811 Msa0810930:CDS 35.0%
!! AAGTTGGTGTAACAACTTTG+CGG - chr5_3:39874936-39874955 Msa0810930:intron 35.0%
! TTCCAACATTTTTCCCCTTA+AGG + chr5_3:39875043-39875062 None:intergenic 35.0%
ATGTCTCTGATGATATACAC+AGG + chr5_3:39875170-39875189 None:intergenic 35.0%
TTACAACATATGGACTTCAC+TGG + chr5_3:39875256-39875275 None:intergenic 35.0%
! TACAGTTTTCCAGATAGTCT+TGG - chr5_3:39875347-39875366 Msa0810930:CDS 35.0%
AAATCATCTCCAAGACTATC+TGG + chr5_3:39875359-39875378 None:intergenic 35.0%
CATTGAAGTTCAAGATTCCA+AGG - chr5_3:39875382-39875401 Msa0810930:CDS 35.0%
!!! ATTCCAAGGGAAAGCATTTT+GGG - chr5_3:39875396-39875415 Msa0810930:CDS 35.0%
AGAAGTTGCAATGAAAGTTC+AGG - chr5_3:39875822-39875841 Msa0810930:intron 35.0%
GAAGTTGCAATGAAAGTTCA+GGG - chr5_3:39875823-39875842 Msa0810930:intron 35.0%
CAAAGGAACCTAGAATTACA+TGG - chr5_3:39875853-39875872 Msa0810930:intron 35.0%
AATTACATGGTCCATGGAAA+TGG - chr5_3:39875866-39875885 Msa0810930:intron 35.0%
CTATTTCCCTTCATGATAAC+AGG + chr5_3:39876130-39876149 None:intergenic 35.0%
TCTTATCAGAATCGACTACT+AGG - chr5_3:39876504-39876523 Msa0810930:intron 35.0%
TATCTGTTCAATTTCGTCCT+TGG + chr5_3:39876535-39876554 None:intergenic 35.0%
AGCTTGTAAAGTTTAACAGC+CGG + chr5_3:39876663-39876682 None:intergenic 35.0%
TCATGATATCTTATCTCCTG+AGG - chr5_3:39876686-39876705 Msa0810930:CDS 35.0%
AAACCCTGTGCATAAATCTT+AGG - chr5_3:39876949-39876968 Msa0810930:intron 35.0%
CATTCCTAAGATTTATGCAC+AGG + chr5_3:39876956-39876975 None:intergenic 35.0%
!! GTTAATGGTTCTAATATGGC+TGG - chr5_3:39877301-39877320 Msa0810930:CDS 35.0%
TTCCTTCTTAGTCCTATCAA+AGG - chr5_3:39877615-39877634 Msa0810930:intron 35.0%
GCAAAGATAGACGTTTATCT+TGG + chr5_3:39877689-39877708 None:intergenic 35.0%
!!! CTTTGCTTTTTCAGGTGAAA+TGG - chr5_3:39877847-39877866 Msa0810930:intron 35.0%
CTCATACATGTCATCAACAA+AGG + chr5_3:39877904-39877923 None:intergenic 35.0%
!! TTGTTGATGACATGTATGAG+CGG - chr5_3:39877904-39877923 Msa0810930:CDS 35.0%
! TCTAGAACCAAGGTATATTC+TGG + chr5_3:39877975-39877994 None:intergenic 35.0%
! AACTTATGTCACCTTTTGTC+AGG - chr5_3:39878409-39878428 Msa0810930:CDS 35.0%
AAGAATTCCAACCTGACAAA+AGG + chr5_3:39878423-39878442 None:intergenic 35.0%
TTGAACTGTGATTCAATCCT+TGG + chr5_3:39878482-39878501 None:intergenic 35.0%
TTTGACAACATTGATGTGCT+TGG + chr5_3:39878701-39878720 None:intergenic 35.0%
GACGAACATAGTAACTTAAC+AGG + chr5_3:39878922-39878941 None:intergenic 35.0%
TCAAGATTCAAAGGAAACAG+TGG - chr5_3:39879095-39879114 Msa0810930:CDS 35.0%
ATTAAGTTACCTGTCCCATT+CGG + chr5_3:39879242-39879261 None:intergenic 35.0%
GATCATGGTATAAAGGTTCA+AGG - chr5_3:39879391-39879410 Msa0810930:CDS 35.0%
GACCTTAAGTAATTAAGCAG+AGG + chr5_3:39879440-39879459 None:intergenic 35.0%
! TTTTCTTACAGCCCATAATC+CGG + chr5_3:39879593-39879612 None:intergenic 35.0%
AAACTGTTGTCCTTGTGATT+AGG + chr5_3:39879777-39879796 None:intergenic 35.0%
TCAAATCTCGAACCCCATTA+CGG - chr5_3:39872275-39872294 Msa0810930:three_prime_UTR 40.0%
GTGAATCAGAAACCGTAATG+GGG + chr5_3:39872290-39872309 None:intergenic 40.0%
GTGTGAATCAGAAACCGTAA+TGG + chr5_3:39872292-39872311 None:intergenic 40.0%
GTTTCTGATTCACACTTCTG+TGG - chr5_3:39872297-39872316 Msa0810930:three_prime_UTR 40.0%
! GGTAGTGCATTTTCATTCAG+AGG - chr5_3:39872457-39872476 Msa0810930:exon 40.0%
! GTGCATTTTCATTCAGAGGT+TGG - chr5_3:39872461-39872480 Msa0810930:exon 40.0%
CTCATAGCTGTGTTTGAGAA+TGG + chr5_3:39872826-39872845 None:intergenic 40.0%
CCGATTAGTGGAATGAAAAG+TGG - chr5_3:39872856-39872875 Msa0810930:CDS 40.0%
!!! CTCCTAAATTTTGATGGTGG+TGG + chr5_3:39872904-39872923 None:intergenic 40.0%
!! CCACTCCTAAATTTTGATGG+TGG + chr5_3:39872907-39872926 None:intergenic 40.0%
CCACCATCAAAATTTAGGAG+TGG - chr5_3:39872904-39872923 Msa0810930:intron 40.0%
GAGACAGGTAACTTATTAGC+AGG + chr5_3:39872937-39872956 None:intergenic 40.0%
TAATAAGTTACCTGTCTCGG+CGG - chr5_3:39872939-39872958 Msa0810930:intron 40.0%
GATTCGGAAGAGGAAGTTTA+TGG - chr5_3:39873009-39873028 Msa0810930:intron 40.0%
! AAGAGGAAGTTTATGGTGGA+AGG - chr5_3:39873016-39873035 Msa0810930:intron 40.0%
TATCTCTTAGCAGCACCATT+GGG + chr5_3:39873078-39873097 None:intergenic 40.0%
ATATCTCTTAGCAGCACCAT+TGG + chr5_3:39873079-39873098 None:intergenic 40.0%
!! AATGGTGCTGCTAAGAGATA+TGG - chr5_3:39873078-39873097 Msa0810930:CDS 40.0%
!! ATGGTGCTGCTAAGAGATAT+GGG - chr5_3:39873079-39873098 Msa0810930:CDS 40.0%
TCTTCCAGTAAGTGTTTCTC+TGG + chr5_3:39873169-39873188 None:intergenic 40.0%
GAAACACTTACTGGAAGACA+AGG - chr5_3:39873171-39873190 Msa0810930:CDS 40.0%
TTTCACTGAGGATGATTCGT+CGG - chr5_3:39873245-39873264 Msa0810930:intron 40.0%
CAAGTAGGGAGTAGTATCAA+TGG - chr5_3:39873300-39873319 Msa0810930:intron 40.0%
!! GACATATAAGCCCTGCTTTT+TGG + chr5_3:39873333-39873352 None:intergenic 40.0%
ATGCTTCTAGTGTACCTTCA+AGG - chr5_3:39873361-39873380 Msa0810930:intron 40.0%
! TTGCTAGCTACTGCTTCTTT+TGG - chr5_3:39873470-39873489 Msa0810930:intron 40.0%
! TGCTAGCTACTGCTTCTTTT+GGG - chr5_3:39873471-39873490 Msa0810930:intron 40.0%
TGAGTAGAACCACAAAATGG+GGG + chr5_3:39873780-39873799 None:intergenic 40.0%
ATGGTTCTCTAACTTATCCC+TGG + chr5_3:39873892-39873911 None:intergenic 40.0%
AGGGATAAGTTAGAGAACCA+TGG - chr5_3:39873891-39873910 Msa0810930:intron 40.0%
CAAGCTCGGAAAAATTCGTT+AGG - chr5_3:39873919-39873938 Msa0810930:intron 40.0%
ACCTTGCATGAAATGTTGGA+AGG + chr5_3:39874155-39874174 None:intergenic 40.0%
GAGCTAATGGTGAAATGCAA+TGG - chr5_3:39874512-39874531 Msa0810930:intron 40.0%
! CAATGGAGAACTTTCTAGTG+AGG - chr5_3:39874529-39874548 Msa0810930:intron 40.0%
TTCCCTGACACATAAAAGCT+TGG - chr5_3:39874862-39874881 Msa0810930:CDS 40.0%
! TGCCAAGCTTTTATGTGTCA+GGG + chr5_3:39874867-39874886 None:intergenic 40.0%
! ATGCCAAGCTTTTATGTGTC+AGG + chr5_3:39874868-39874887 None:intergenic 40.0%
CGCTATATACAACAAGTCTC+TGG - chr5_3:39874905-39874924 Msa0810930:CDS 40.0%
TATGAAGCTGTGCAAGGTAT+GGG - chr5_3:39874974-39874993 Msa0810930:intron 40.0%
! ACATTTTTCCCCTTAAGGCA+TGG + chr5_3:39875038-39875057 None:intergenic 40.0%
TGCCTTAAGGGGAAAAATGT+TGG - chr5_3:39875038-39875057 Msa0810930:intron 40.0%
TAGTTGAAGAAGACGCCATT+AGG - chr5_3:39875217-39875236 Msa0810930:intron 40.0%
!!! GATTCCAAGGGAAAGCATTT+TGG - chr5_3:39875395-39875414 Msa0810930:CDS 40.0%
!! TTTTTAGTGCCTGTGTTGAG+AGG - chr5_3:39875489-39875508 Msa0810930:intron 40.0%
TAATGATCACCTCTCAACAC+AGG + chr5_3:39875501-39875520 None:intergenic 40.0%
ATGACTATTGTCATCTGCAC+TGG + chr5_3:39875639-39875658 None:intergenic 40.0%
!! TCATTGCAACTTCTAGAACC+AGG + chr5_3:39875816-39875835 None:intergenic 40.0%
ACCTAGAATTACATGGTCCA+TGG - chr5_3:39875860-39875879 Msa0810930:intron 40.0%
TCCATGGACCATGTAATTCT+AGG + chr5_3:39875864-39875883 None:intergenic 40.0%
CTGAGATTTATACGAAGCTG+AGG - chr5_3:39875923-39875942 Msa0810930:intron 40.0%
AAGTTAAGGCAATCTGCTGT+TGG + chr5_3:39876088-39876107 None:intergenic 40.0%
AACAGCAGATTGCCTTAACT+TGG - chr5_3:39876087-39876106 Msa0810930:intron 40.0%
CTTGCACCTGTTATCATGAA+GGG - chr5_3:39876121-39876140 Msa0810930:CDS 40.0%
ATGTTGTATATGGCCATGCT+TGG + chr5_3:39876407-39876426 None:intergenic 40.0%
CTTGATGAGTCATCTTTCTC+TGG - chr5_3:39876585-39876604 Msa0810930:intron 40.0%
! GTAGTGACAGAAACTGGTTT+GGG + chr5_3:39876712-39876731 None:intergenic 40.0%
AGTAGTGACAGAAACTGGTT+TGG + chr5_3:39876713-39876732 None:intergenic 40.0%
! GGTTTTCATCTTCTGGTAAG+CGG + chr5_3:39876934-39876953 None:intergenic 40.0%
TTCAAAGAGATCTTTCAGGC+TGG - chr5_3:39877479-39877498 Msa0810930:CDS 40.0%
CACCTTTGATAGGACTAAGA+AGG + chr5_3:39877620-39877639 None:intergenic 40.0%
CTTCTTAGTCCTATCAAAGG+TGG - chr5_3:39877618-39877637 Msa0810930:intron 40.0%
!!! CTTTTTCAGGTGAAATGGTC+TGG - chr5_3:39877852-39877871 Msa0810930:intron 40.0%
GGAAACATTGACAGACTATG+AGG - chr5_3:39877932-39877951 Msa0810930:CDS 40.0%
GGCAATAGCTGATATTGAGA+AGG - chr5_3:39878178-39878197 Msa0810930:intron 40.0%
TGATATTGAGAAGGCGATTG+TGG - chr5_3:39878187-39878206 Msa0810930:intron 40.0%
AGCTCCTCTTAAAGATAGCA+TGG - chr5_3:39878241-39878260 Msa0810930:intron 40.0%
AGCATGGCACCTAAGAAATT+TGG - chr5_3:39878257-39878276 Msa0810930:intron 40.0%
GCATGGCACCTAAGAAATTT+GGG - chr5_3:39878258-39878277 Msa0810930:intron 40.0%
ATGTCCAGAAACTTGCCAAA+CGG - chr5_3:39878288-39878307 Msa0810930:intron 40.0%
! TATGTCACCTTTTGTCAGGT+TGG - chr5_3:39878413-39878432 Msa0810930:CDS 40.0%
AAAGTTCAGGAACTACTTGC+AGG - chr5_3:39878583-39878602 Msa0810930:intron 40.0%
! TGGCACAACTCTTTTACCAA+GGG + chr5_3:39878681-39878700 None:intergenic 40.0%
! TTGGCACAACTCTTTTACCA+AGG + chr5_3:39878682-39878701 None:intergenic 40.0%
CTAGAAACATATGCAACCTC+TGG + chr5_3:39878865-39878884 None:intergenic 40.0%
TAGCATTCTGTAACTTCGTC+TGG + chr5_3:39879056-39879075 None:intergenic 40.0%
ATGGTATAAAGGTTCAAGGG+TGG - chr5_3:39879395-39879414 Msa0810930:CDS 40.0%
ATTTAGTCAATGTGCGCTCT+TGG - chr5_3:39879565-39879584 Msa0810930:intron 40.0%
TTTAGTCAATGTGCGCTCTT+GGG - chr5_3:39879566-39879585 Msa0810930:intron 40.0%
AACCTGCATTCATGCATACA+CGG + chr5_3:39879637-39879656 None:intergenic 40.0%
TAGAAGTTGTTGCATCTGTG+AGG + chr5_3:39879676-39879695 None:intergenic 40.0%
TCACAGATGCAACAACTTCT+AGG - chr5_3:39879675-39879694 Msa0810930:intron 40.0%
TGCGATACAAGAGAAAGACA+TGG - chr5_3:39879701-39879720 Msa0810930:intron 40.0%
GATACAAGAGAAAGACATGG+AGG - chr5_3:39879704-39879723 Msa0810930:intron 40.0%
TAAAGACGCTCCTAATCACA+AGG - chr5_3:39879764-39879783 Msa0810930:exon 40.0%
GCTTACTCCTGCTACAAAAT+TGG + chr5_3:39879891-39879910 None:intergenic 40.0%
AGATCTCGTGATCCGATTAG+TGG - chr5_3:39872844-39872863 Msa0810930:intron 45.0%
TCGGAAGAGGAAGTTTATGG+TGG - chr5_3:39873012-39873031 Msa0810930:intron 45.0%
ATCTCTTAGCAGCACCATTG+GGG + chr5_3:39873077-39873096 None:intergenic 45.0%
TCGTCCAGAGAAACACTTAC+TGG - chr5_3:39873162-39873181 Msa0810930:CDS 45.0%
TGGAAGACAAGGAATGACGA+GGG - chr5_3:39873182-39873201 Msa0810930:CDS 45.0%
TTAGCAGCACTCCTCATTAC+CGG + chr5_3:39873210-39873229 None:intergenic 45.0%
!! GTAATGAGGAGTGCTGCTAA+TGG - chr5_3:39873210-39873229 Msa0810930:intron 45.0%
AAGGCAGAATGGTTTCACTG+AGG - chr5_3:39873233-39873252 Msa0810930:intron 45.0%
GATACTACTCCCTACTTGTG+TGG + chr5_3:39873298-39873317 None:intergenic 45.0%
ATGGCACTCTTCCAAAAAGC+AGG - chr5_3:39873319-39873338 Msa0810930:intron 45.0%
TGGCACTCTTCCAAAAAGCA+GGG - chr5_3:39873320-39873339 Msa0810930:intron 45.0%
TGTCCAACACGTGTCAATGT+CGG - chr5_3:39873537-39873556 Msa0810930:intron 45.0%
! TGGAAGGTTATCTGATGACG+AGG - chr5_3:39873734-39873753 Msa0810930:CDS 45.0%
GTACTACGTGTTGCAGAAGT+TGG + chr5_3:39873831-39873850 None:intergenic 45.0%
!! AGAACTGCTACTGGTTCAGA+GGG - chr5_3:39874099-39874118 Msa0810930:intron 45.0%
GCCTTCCAACATTTCATGCA+AGG - chr5_3:39874151-39874170 Msa0810930:intron 45.0%
AGTGCTTCTTCAACCAGAAG+AGG - chr5_3:39874490-39874509 Msa0810930:intron 45.0%
TCAACCAGAAGAGGAGCTAA+TGG - chr5_3:39874499-39874518 Msa0810930:intron 45.0%
TTCACCATTAGCTCCTCTTC+TGG + chr5_3:39874506-39874525 None:intergenic 45.0%
! ATTGGCAAGATGAAGGTGCA+AGG - chr5_3:39874578-39874597 Msa0810930:CDS 45.0%
TGCAGTACGCAAAGTCAAAG+TGG - chr5_3:39874679-39874698 Msa0810930:intron 45.0%
GCAGTACGCAAAGTCAAAGT+GGG - chr5_3:39874680-39874699 Msa0810930:intron 45.0%
CAGTACGCAAAGTCAAAGTG+GGG - chr5_3:39874681-39874700 Msa0810930:intron 45.0%
ACATGCTACATCCAGTAGGA+GGG + chr5_3:39874712-39874731 None:intergenic 45.0%
GATGACATGCTACATCCAGT+AGG + chr5_3:39874716-39874735 None:intergenic 45.0%
GTACCACATTTGCCTGCAAA+TGG - chr5_3:39874839-39874858 Msa0810930:CDS 45.0%
GAACCATTTGCAGGCAAATG+TGG + chr5_3:39874845-39874864 None:intergenic 45.0%
GTCTCTGGACTCCTAAAAGT+TGG - chr5_3:39874920-39874939 Msa0810930:intron 45.0%
CATACCTTGCACAGCTTCAT+AGG + chr5_3:39874975-39874994 None:intergenic 45.0%
CTATGAAGCTGTGCAAGGTA+TGG - chr5_3:39874973-39874992 Msa0810930:intron 45.0%
ATATGGACTTCACTGGATCC+AGG + chr5_3:39875249-39875268 None:intergenic 45.0%
AACAGTCTGACAAAGTACGC+TGG - chr5_3:39875546-39875565 Msa0810930:CDS 45.0%
GTATCTTGCCAACAAGCTCA+TGG + chr5_3:39875595-39875614 None:intergenic 45.0%
TTGTCTTTGTGGTTGCAGTG+TGG - chr5_3:39875763-39875782 Msa0810930:intron 45.0%
AAGTTCAGGGCTTTCAGCAA+AGG - chr5_3:39875836-39875855 Msa0810930:intron 45.0%
TCTGTCAAGAGCCATTTCCA+TGG + chr5_3:39875880-39875899 None:intergenic 45.0%
GCTTGCACCTGTTATCATGA+AGG - chr5_3:39876120-39876139 Msa0810930:CDS 45.0%
ATGTCGATGATACCTCTTGG+TGG + chr5_3:39876168-39876187 None:intergenic 45.0%
GAGATGTCGATGATACCTCT+TGG + chr5_3:39876171-39876190 None:intergenic 45.0%
!! ATCTTTCTCTGGAATCGTCG+AGG - chr5_3:39876596-39876615 Msa0810930:intron 45.0%
! AAGTTTAACAGCCGGTTCCA+AGG + chr5_3:39876655-39876674 None:intergenic 45.0%
CTGGAAGTAGTGACAGAAAC+TGG + chr5_3:39876718-39876737 None:intergenic 45.0%
CAGTTTCTGTCACTACTTCC+AGG - chr5_3:39876716-39876735 Msa0810930:intron 45.0%
TTCTGTCACTACTTCCAGGT+TGG - chr5_3:39876720-39876739 Msa0810930:intron 45.0%
GAACTCAAGTTTCTCCAACC+TGG + chr5_3:39876737-39876756 None:intergenic 45.0%
! TCAGGTTGCGGCAAAAAAGA+GGG - chr5_3:39876827-39876846 Msa0810930:CDS 45.0%
TAAGCGGTAGACATGGTCAA+AGG + chr5_3:39876918-39876937 None:intergenic 45.0%
! TGCACAGGGTTTTCATCTTC+TGG + chr5_3:39876941-39876960 None:intergenic 45.0%
TGGAAGCAGAAAGATTTGGC+AGG + chr5_3:39877354-39877373 None:intergenic 45.0%
GCAAAGCTCTGTGCTGTATA+TGG + chr5_3:39877374-39877393 None:intergenic 45.0%
! AGTTCTGCTACTGGTGATGA+TGG + chr5_3:39877439-39877458 None:intergenic 45.0%
GCAATGACAAGTTCTGCTAC+TGG + chr5_3:39877448-39877467 None:intergenic 45.0%
TAGTCCTATCAAAGGTGGAG+TGG - chr5_3:39877623-39877642 Msa0810930:intron 45.0%
CGAGTCGTGCAAATTAGACA+AGG - chr5_3:39877710-39877729 Msa0810930:CDS 45.0%
! GGTGCCATGCTATCTTTAAG+AGG + chr5_3:39878248-39878267 None:intergenic 45.0%
TAGACCGTTTGGCAAGTTTC+TGG + chr5_3:39878295-39878314 None:intergenic 45.0%
ATAGGCACATGTAGACCGTT+TGG + chr5_3:39878306-39878325 None:intergenic 45.0%
TAAATTCAACCCACCTCCTC+AGG + chr5_3:39878335-39878354 None:intergenic 45.0%
GCTTCTTGCTTACCAAATGC+TGG - chr5_3:39878509-39878528 Msa0810930:CDS 45.0%
GAACTTTGCTCTCAGCATCA+CGG + chr5_3:39878570-39878589 None:intergenic 45.0%
TGATGCTGAGAGCAAAGTTC+AGG - chr5_3:39878570-39878589 Msa0810930:intron 45.0%
GAACTACTTGCAGGCTATTG+TGG - chr5_3:39878592-39878611 Msa0810930:intron 45.0%
GCAGTACTGTAAGTTACGAG+AGG - chr5_3:39878723-39878742 Msa0810930:intron 45.0%
AAGGGAACAATACTGACCAG+AGG - chr5_3:39878846-39878865 Msa0810930:intron 45.0%
CTAGCTAACTGCTCTTTCAG+TGG + chr5_3:39879150-39879169 None:intergenic 45.0%
! GTTTTCATTGCCATCTGTCG+AGG - chr5_3:39879207-39879226 Msa0810930:CDS 45.0%
TTGCCATCTGTCGAGGTTAT+TGG - chr5_3:39879214-39879233 Msa0810930:CDS 45.0%
TGCCATCTGTCGAGGTTATT+GGG - chr5_3:39879215-39879234 Msa0810930:CDS 45.0%
AACCGTGTATGCATGAATGC+AGG - chr5_3:39879632-39879651 Msa0810930:intron 45.0%
GTATGCATGAATGCAGGTTC+TGG - chr5_3:39879638-39879657 Msa0810930:intron 45.0%
! GGTCACACCAATTTTGTAGC+AGG - chr5_3:39879881-39879900 Msa0810930:five_prime_UTR 45.0%
TAAGCAACTCAACTGCTCCT+AGG - chr5_3:39879906-39879925 Msa0810930:five_prime_UTR 45.0%
AGTGGAATGAAAAGTGGCGG+CGG - chr5_3:39872862-39872881 Msa0810930:CDS 50.0%
GCGGTTGAGACATTCGATAG+CGG - chr5_3:39872958-39872977 Msa0810930:intron 50.0%
!! TATGGACGCCAGCGTTGATT+CGG - chr5_3:39872993-39873012 Msa0810930:intron 50.0%
TTCCTCTTCCGAATCAACGC+TGG + chr5_3:39873004-39873023 None:intergenic 50.0%
TTGGGGACTCTGTTGTCTTG+TGG + chr5_3:39873060-39873079 None:intergenic 50.0%
CAAGACAACAGAGTCCCCAA+TGG - chr5_3:39873060-39873079 Msa0810930:CDS 50.0%
GGAATGTTGCTCAGATGCCA+CGG - chr5_3:39873100-39873119 Msa0810930:CDS 50.0%
CTGGAAGACAAGGAATGACG+AGG - chr5_3:39873181-39873200 Msa0810930:CDS 50.0%
ACAAGGAATGACGAGGGATC+CGG - chr5_3:39873188-39873207 Msa0810930:CDS 50.0%
!! TGAGGAGTGCTGCTAATGGA+AGG - chr5_3:39873214-39873233 Msa0810930:intron 50.0%
GCTGCTAATGGAAGGCAGAA+TGG - chr5_3:39873222-39873241 Msa0810930:intron 50.0%
GGATGATTCGTCGGATTCTG+CGG - chr5_3:39873254-39873273 Msa0810930:intron 50.0%
AGCAGGGCTTATATGTCAGC+AGG - chr5_3:39873336-39873355 Msa0810930:intron 50.0%
GCAGGGCTTATATGTCAGCA+GGG - chr5_3:39873337-39873356 Msa0810930:intron 50.0%
ACTACGTAGCACGGACACTT+CGG - chr5_3:39873504-39873523 Msa0810930:intron 50.0%
TGTCCGACATTGACACGTGT+TGG + chr5_3:39873543-39873562 None:intergenic 50.0%
GTCAATGTCGGACACTCACA+CGG - chr5_3:39873549-39873568 Msa0810930:intron 50.0%
GTAAGTGTCTGTGCTGTGTC+CGG - chr5_3:39873623-39873642 Msa0810930:intron 50.0%
CACGGACACAGACACAATAC+CGG + chr5_3:39873645-39873664 None:intergenic 50.0%
TGTCTGTGTCCGTGCTTCAT+AGG - chr5_3:39873651-39873670 Msa0810930:CDS 50.0%
GAACCATGGAGATGCAAGCT+CGG - chr5_3:39873905-39873924 Msa0810930:intron 50.0%
TTTCCGAGCTTGCATCTCCA+TGG + chr5_3:39873911-39873930 None:intergenic 50.0%
TGCGTTCACAGAACTGCTAC+TGG - chr5_3:39874090-39874109 Msa0810930:intron 50.0%
!! CAGAACTGCTACTGGTTCAG+AGG - chr5_3:39874098-39874117 Msa0810930:intron 50.0%
AAGGCGAGGTGGTTGTGAAT+TGG + chr5_3:39874136-39874155 None:intergenic 50.0%
TGAAATGTTGGAAGGCGAGG+TGG + chr5_3:39874147-39874166 None:intergenic 50.0%
GCATGAAATGTTGGAAGGCG+AGG + chr5_3:39874150-39874169 None:intergenic 50.0%
! TTTTCAGTGCTCTTGGGCCA+TGG - chr5_3:39874257-39874276 Msa0810930:intron 50.0%
GACATGCTACATCCAGTAGG+AGG + chr5_3:39874713-39874732 None:intergenic 50.0%
GGCACGCTCTTAGGAAAGTT+CGG - chr5_3:39874813-39874832 Msa0810930:CDS 50.0%
TGTGTCAGGGAACCATTTGC+AGG + chr5_3:39874854-39874873 None:intergenic 50.0%
TCCTCCTATGAAGCTGTGCA+AGG - chr5_3:39874968-39874987 Msa0810930:intron 50.0%
ACCTTGCACAGCTTCATAGG+AGG + chr5_3:39874972-39874991 None:intergenic 50.0%
ACGCCCAAAATGCTTTCCCT+TGG + chr5_3:39875402-39875421 None:intergenic 50.0%
TATCAGCGATAGCAGCCACT+TGG + chr5_3:39875433-39875452 None:intergenic 50.0%
GGCTGCTATCGCTGATAATC+CGG - chr5_3:39875436-39875455 Msa0810930:intron 50.0%
AGTCTGACAAAGTACGCTGG+TGG - chr5_3:39875549-39875568 Msa0810930:CDS 50.0%
! CAAGCTCATGGTCTGGTTCA+CGG + chr5_3:39875583-39875602 None:intergenic 50.0%
GAACCAGACCATGAGCTTGT+TGG - chr5_3:39875584-39875603 Msa0810930:CDS 50.0%
TTGCCAACAAGCTCATGGTC+TGG + chr5_3:39875590-39875609 None:intergenic 50.0%
! GTTGCAGTGTGGTTCTGTAG+CGG - chr5_3:39875774-39875793 Msa0810930:intron 50.0%
GGAGACAGTTGCATATGACC+TGG - chr5_3:39875795-39875814 Msa0810930:intron 50.0%
AAGGCAATCTGCTGTTGGTG+TGG + chr5_3:39876083-39876102 None:intergenic 50.0%
AACTTCCTTGAGCCACCAAG+AGG - chr5_3:39876153-39876172 Msa0810930:CDS 50.0%
! TGATACCTCTTGGTGGCTCA+AGG + chr5_3:39876161-39876180 None:intergenic 50.0%
TCGACTACTAGGAGAGACCA+AGG - chr5_3:39876515-39876534 Msa0810930:intron 50.0%
! CTCAGGTTGCGGCAAAAAAG+AGG - chr5_3:39876826-39876845 Msa0810930:CDS 50.0%
CGGCAAAAAAGAGGGCTAGA+AGG - chr5_3:39876835-39876854 Msa0810930:CDS 50.0%
CTTCTGGTAAGCGGTAGACA+TGG + chr5_3:39876925-39876944 None:intergenic 50.0%
CGGTGGACAAGATATGAGGA+AGG + chr5_3:39877410-39877429 None:intergenic 50.0%
CTGTCGGTGGACAAGATATG+AGG + chr5_3:39877414-39877433 None:intergenic 50.0%
CTCATATCTTGTCCACCGAC+AGG - chr5_3:39877412-39877431 Msa0810930:CDS 50.0%
!! ACTGGTGATGATGGACCTGT+CGG + chr5_3:39877430-39877449 None:intergenic 50.0%
GCATCCACTCCACCTTTGAT+AGG + chr5_3:39877630-39877649 None:intergenic 50.0%
TGACATGTATGAGCGGCTGA+AGG - chr5_3:39877911-39877930 Msa0810930:CDS 50.0%
ATGAGGTCATCATTTGCCGC+TGG - chr5_3:39877949-39877968 Msa0810930:CDS 50.0%
CCAAGGTATATTCTGGCCAG+CGG + chr5_3:39877968-39877987 None:intergenic 50.0%
ACGGTCTACATGTGCCTATG+TGG - chr5_3:39878307-39878326 Msa0810930:intron 50.0%
ATGTGCCTATGTGGTTCCTG+AGG - chr5_3:39878316-39878335 Msa0810930:intron 50.0%
TATGTGGTTCCTGAGGAGGT+GGG - chr5_3:39878323-39878342 Msa0810930:intron 50.0%
GATGTCGAGCATCCTCTTCA+AGG + chr5_3:39878453-39878472 None:intergenic 50.0%
TGCTCGACATCTTACGTCCA+AGG - chr5_3:39878462-39878481 Msa0810930:CDS 50.0%
! GGTGCTGTGTTTCCAGCATT+TGG + chr5_3:39878524-39878543 None:intergenic 50.0%
AATGCTGGAAACACAGCACC+TGG - chr5_3:39878524-39878543 Msa0810930:CDS 50.0%
GGCTATTGTGGAGAAACTCG+TGG - chr5_3:39878604-39878623 Msa0810930:intron 50.0%
GTCCCAATAACCTCGACAGA+TGG + chr5_3:39879220-39879239 None:intergenic 50.0%
TCGAGGTTATTGGGACCGAA+TGG - chr5_3:39879224-39879243 Msa0810930:CDS 50.0%
CGAGGTTATTGGGACCGAAT+GGG - chr5_3:39879225-39879244 Msa0810930:CDS 50.0%
TTATTGGGACCGAATGGGAC+AGG - chr5_3:39879230-39879249 Msa0810930:CDS 50.0%
CGAACCTCCATGATGCATCT+AGG + chr5_3:39879732-39879751 None:intergenic 50.0%
CGCACTTAGATGGGTCAGAG+AGG - chr5_3:39872524-39872543 Msa0810930:CDS 55.0%
ATGAAAAGTGGCGGCGGTAG+AGG - chr5_3:39872868-39872887 Msa0810930:CDS 55.0%
TGAAAAGTGGCGGCGGTAGA+GGG - chr5_3:39872869-39872888 Msa0810930:CDS 55.0%
AATGTCTCAACCGCCGAGAC+AGG + chr5_3:39872952-39872971 None:intergenic 55.0%
TTGCTCAGATGCCACGGTCT+CGG - chr5_3:39873106-39873125 Msa0810930:CDS 55.0%
TGACGAGGGATCCGGTAATG+AGG - chr5_3:39873196-39873215 Msa0810930:CDS 55.0%
! CCACAAAATGGGGGTGCACT+CGG + chr5_3:39873771-39873790 None:intergenic 55.0%
GCGAGGTGGTTGTGAATTGG+AGG + chr5_3:39874133-39874152 None:intergenic 55.0%
GCGTCTTTGCCTTCACGCTT+GGG - chr5_3:39874309-39874328 Msa0810930:CDS 55.0%
! CTTCTGGTTGGCACGCTCTT+AGG - chr5_3:39874804-39874823 Msa0810930:CDS 55.0%
GGATCCAGGCTGCAACCTAA+TGG + chr5_3:39875235-39875254 None:intergenic 55.0%
TGGGCGTGTTCTTGTCCAAG+TGG - chr5_3:39875415-39875434 Msa0810930:CDS 55.0%
! TTAACAGCCGGTTCCAAGGC+AGG + chr5_3:39876651-39876670 None:intergenic 55.0%
!! CAGAAACTGGTTTGGGCCTC+AGG + chr5_3:39876705-39876724 None:intergenic 55.0%
CCGCTGGCCAGAATATACCT+TGG - chr5_3:39877965-39877984 Msa0810930:CDS 55.0%
TGCCTATGTGGTTCCTGAGG+AGG - chr5_3:39878319-39878338 Msa0810930:intron 55.0%
CACCTCCTCAGGAACCACAT+AGG + chr5_3:39878324-39878343 None:intergenic 55.0%
CTATGTGGTTCCTGAGGAGG+TGG - chr5_3:39878322-39878341 Msa0810930:intron 55.0%
ACTTCGCTAAGTCGCTCACC+AGG + chr5_3:39878545-39878564 None:intergenic 55.0%
TCAATGTGCGCTCTTGGGTC+CGG - chr5_3:39879571-39879590 Msa0810930:intron 55.0%
CGCTCTTGGGTCCGGATTAT+GGG - chr5_3:39879579-39879598 Msa0810930:intron 55.0%
!! GGAGGCACCTAGATGCATCA+TGG - chr5_3:39879722-39879741 Msa0810930:intron 55.0%
GGCACCTAGATGCATCATGG+AGG - chr5_3:39879725-39879744 Msa0810930:intron 55.0%
!! CGCCAGCGTTGATTCGGAAG+AGG - chr5_3:39872999-39873018 Msa0810930:intron 60.0%
TCACTCGCATACCGAGACCG+TGG + chr5_3:39873120-39873139 None:intergenic 60.0%
GCACGGACACTTCGGATCGA+AGG - chr5_3:39873512-39873531 Msa0810930:intron 60.0%
! CCGAGTGCACCCCCATTTTG+TGG - chr5_3:39873768-39873787 Msa0810930:CDS 60.0%
GTGAAGGCAAAGACGCGCAC+AGG + chr5_3:39874305-39874324 None:intergenic 60.0%
CGCGTCTTTGCCTTCACGCT+TGG - chr5_3:39874308-39874327 Msa0810930:CDS 60.0%
ACTGCATCGCCCAAGCGTGA+AGG + chr5_3:39874321-39874340 None:intergenic 60.0%
CGCTTGGGCGATGCAGTGTA+TGG - chr5_3:39874324-39874343 Msa0810930:CDS 60.0%
! GACGCCATTAGGTTGCAGCC+TGG - chr5_3:39875228-39875247 Msa0810930:intron 60.0%
GGAGCTGCATGACTGGATGC+TGG + chr5_3:39876630-39876649 None:intergenic 60.0%
CAAGGCAGGAGCTGCATGAC+TGG + chr5_3:39876637-39876656 None:intergenic 60.0%
CAGTCATGCAGCTCCTGCCT+TGG - chr5_3:39876635-39876654 Msa0810930:CDS 60.0%
TGCAGCTCCTGCCTTGGAAC+CGG - chr5_3:39876641-39876660 Msa0810930:CDS 60.0%
!! GGTGATGATGGACCTGTCGG+TGG + chr5_3:39877427-39877446 None:intergenic 60.0%
GCGCTCTTGGGTCCGGATTA+TGG - chr5_3:39879578-39879597 Msa0810930:intron 60.0%
AGTGGCGGCGGTAGAGGGTG+TGG - chr5_3:39872874-39872893 Msa0810930:CDS 70.0%
GTGGGGCTCGACCCTCCTAC+TGG - chr5_3:39874698-39874717 Msa0810930:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 39872134 39880142 39872134 ID=Msa0810930;Name=Msa0810930
chr5_3 mRNA 39872134 39880142 39872134 ID=Msa0810930-mRNA-1;Parent=Msa0810930;Name=Msa0810930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=364|1|1|1|1|1|22|336|1229
chr5_3 exon 39872134 39872622 39872134 ID=Msa0810930-mRNA-1:exon:12171;Parent=Msa0810930-mRNA-1
chr5_3 exon 39872851 39872922 39872851 ID=Msa0810930-mRNA-1:exon:12170;Parent=Msa0810930-mRNA-1
chr5_3 exon 39873025 39873219 39873025 ID=Msa0810930-mRNA-1:exon:12169;Parent=Msa0810930-mRNA-1
chr5_3 exon 39873645 39873845 39873645 ID=Msa0810930-mRNA-1:exon:12168;Parent=Msa0810930-mRNA-1
chr5_3 exon 39873936 39874097 39873936 ID=Msa0810930-mRNA-1:exon:12167;Parent=Msa0810930-mRNA-1
chr5_3 exon 39874278 39874415 39874278 ID=Msa0810930-mRNA-1:exon:12166;Parent=Msa0810930-mRNA-1
chr5_3 exon 39874545 39874650 39874545 ID=Msa0810930-mRNA-1:exon:12165;Parent=Msa0810930-mRNA-1
chr5_3 exon 39874767 39874934 39874767 ID=Msa0810930-mRNA-1:exon:12164;Parent=Msa0810930-mRNA-1
chr5_3 exon 39875255 39875445 39875255 ID=Msa0810930-mRNA-1:exon:12163;Parent=Msa0810930-mRNA-1
chr5_3 exon 39875539 39875763 39875539 ID=Msa0810930-mRNA-1:exon:12162;Parent=Msa0810930-mRNA-1
chr5_3 exon 39876102 39876222 39876102 ID=Msa0810930-mRNA-1:exon:12161;Parent=Msa0810930-mRNA-1
chr5_3 exon 39876332 39876495 39876332 ID=Msa0810930-mRNA-1:exon:12160;Parent=Msa0810930-mRNA-1
chr5_3 exon 39876612 39876725 39876612 ID=Msa0810930-mRNA-1:exon:12159;Parent=Msa0810930-mRNA-1
chr5_3 exon 39876819 39876924 39876819 ID=Msa0810930-mRNA-1:exon:12158;Parent=Msa0810930-mRNA-1
chr5_3 exon 39877005 39877092 39877005 ID=Msa0810930-mRNA-1:exon:12157;Parent=Msa0810930-mRNA-1
chr5_3 exon 39877287 39877592 39877287 ID=Msa0810930-mRNA-1:exon:12156;Parent=Msa0810930-mRNA-1
chr5_3 exon 39877677 39877795 39877677 ID=Msa0810930-mRNA-1:exon:12155;Parent=Msa0810930-mRNA-1
chr5_3 exon 39877878 39878012 39877878 ID=Msa0810930-mRNA-1:exon:12154;Parent=Msa0810930-mRNA-1
chr5_3 exon 39878104 39878175 39878104 ID=Msa0810930-mRNA-1:exon:12153;Parent=Msa0810930-mRNA-1
chr5_3 exon 39878336 39878544 39878336 ID=Msa0810930-mRNA-1:exon:12152;Parent=Msa0810930-mRNA-1
chr5_3 exon 39878866 39879462 39878866 ID=Msa0810930-mRNA-1:exon:12151;Parent=Msa0810930-mRNA-1
chr5_3 exon 39879731 39880142 39879731 ID=Msa0810930-mRNA-1:exon:12150;Parent=Msa0810930-mRNA-1
chr5_3 five_prime_UTR 39879779 39880142 39879779 ID=Msa0810930-mRNA-1:five_prime_utr;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39879731 39879778 39879731 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39878866 39879462 39878866 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39878336 39878544 39878336 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39878104 39878175 39878104 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39877878 39878012 39877878 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39877677 39877795 39877677 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39877287 39877592 39877287 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39877005 39877092 39877005 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39876819 39876924 39876819 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39876612 39876725 39876612 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39876332 39876495 39876332 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39876102 39876222 39876102 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39875539 39875763 39875539 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39875255 39875445 39875255 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39874767 39874934 39874767 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39874545 39874650 39874545 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39874278 39874415 39874278 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39873936 39874097 39873936 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39873645 39873845 39873645 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39873025 39873219 39873025 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39872851 39872922 39872851 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 CDS 39872470 39872622 39872470 ID=Msa0810930-mRNA-1:cds;Parent=Msa0810930-mRNA-1
chr5_3 three_prime_UTR 39872134 39872469 39872134 ID=Msa0810930-mRNA-1:three_prime_utr;Parent=Msa0810930-mRNA-1
Gene Sequence

>Msa0810930

ATGTTCACTGAAGGACTTGACAAAAACGCACTTAGATGGGTCAGAGAGAAGGAAGTGCCATTCTCAAACACAGCTATGAGATCTCGTGATCCGATTAGTGGAATGAAAAGTGGCGGCGGTAGAGGGTGTGGATTACCACCACCATCAAAATTTAGGAGTGGTCATCTTCCTGCTAATAAGTTACCTGTCTCGGCGGTTGAGACATTCGATAGCGGTTCAAATAGTGATATGGACGCCAGCGTTGATTCGGAAGAGGAAGTTTATGGTGGAAGGTATTCTTTGGATTCATCACCACAAGACAACAGAGTCCCCAATGGTGCTGCTAAGAGATATGGGAATGTTGCTCAGATGCCACGGTCTCGGTATGCGAGTGATTACACGTTCTCTGATGTTAGTTCGTCCAGAGAAACACTTACTGGAAGACAAGGAATGACGAGGGATCCGGTAATGAGGAGTGCTGCTAATGGAAGGCAGAATGGTTTCACTGAGGATGATTCGTCGGATTCTGCGGCTAGCTCAGAATTTTCTACCACACAAGTAGGGAGTAGTATCAATGGCACTCTTCCAAAAAGCAGGGCTTATATGTCAGCAGGGTATGCTTCTAGTGTACCTTCAAGGATGAATGTTCAAAGTTCTGCAGAAAAGAGTGGAAGGTTATCTGATGACGAGGACGAAGACATTCCGAGTGCACCCCCATTTTGTGGTTCTACTCAAGAGATAAGACAAACTAACGAGGAAATTCCAACTTCTGCAACACGTAGTACTCCAAATAAAGCAGAATCAAGTACTTTGAAATCTGTATCCAGGGATAAGTTAGAGAACCATGGAGATGCAAGCTCGGAAAAATTCGTTAGAACTGCTACTGGTTCAGAGGGTGCTGCATCCTCCAATTCACAACCACCTCGCCTTCCAACATTTCATGCAAGTGCTCTTGGGCCATGGTATGCAGTAATTGCATACGACGCCTGTGCGCGTCTTTGCCTTCACGCTTGGGCGATGCAGTGTATGGAAGCTCCAATGTTTTTGGAAAATGAATGCTCTTTACTTAGAGATGCATTTGGATTGCGACAAGTGCTTCTTCAACCAGAAGAGGAGCTAATGGTGAAATGCAATGGAGAACTTTCTAGTGAGGGTGTTGCTCCTAAACTGAAAAAACTTATTGGCAAGATGAAGGTGCAAGTACGCAAAGTCAAAGTGGGGCTCGACCCTCCTACTGGATGTAGCATGTCATCAATAGTGACACATAAAATTAAAATGGATTCAATGCGACACCACTTCTCAAATTTGCAGTCAAAACTATCTTCTGGTTGGCACGCTCTTAGGAAAGTTCGGTTTGTACCACATTTGCCTGCAAATGGTTCCCTGACACATAAAAGCTTGGCATATGTGCATGCTAGCACACGCTATATACAACAAGTCTCTGGACTCCTAAAAGTTGGTGTAACAACTTTGCGGAATAGTTCATCCTCCTATGAAGCTGTGCAAGAGACATTCACGTGTTTCTTACGACTCAAAAGTGTAGTTGAAGAAGACGCCATTAGGTTGCAGCCTGGATCCAGTGAAGTCCATATGTTTTTTCCAGATAGTCTTGGAGATGATTTGCTCATTGAAGTTCAAGATTCCAAGGGAAAGCATTTTGGGCGTGTTCTTGTCCAAGTGGCTGCTATCGCTGATAATCCGTCTGACAAAGTACGCTGGTGGAATGTTTACCGTGAACCAGACCATGAGCTTGTTGGCAAGATACAGCTTTATATACTCTATTCAACCAGTGCAGATGACAATAGTCATCTTAAGTGTGGTTCTGTAGCGGAGACAGTTGCATATGACCTGGTTCTAGAAGTTGCAATGAAAGTTCAGGGCTTTCAGCAAAGGAACCTAGAATTACATGGTCCATGGAAATGGCTCTTGACAGAGTTTGCTTCATATTATGGTGTGTCTGAGATTTATACGAAGCTGAGATATCTATCGTATGTCATGGATGTTGCCACACCAACAGCAGATTGCCTTAACTTGGTATATAATCTGCTTGCACCTGTTATCATGAAGGGAAATAGCAAAACTTCCTTGAGCCACCAAGAGAATCGACTACTAGGAGAGACCAAGGACGAAATTGAACAGATACTCACACTTACATTTGAGAATTACAAGTCACTTGATGAGTCATCTTTCTCTGGAATCGTCGAGGTTTTCAGACCAGCATCCAGTCATGCAGCTCCTGCCTTGGAACCGGCTGTTAAACTTTACAAGCTTCTTCATGATATCTTATCTCCTGAGGCCCAAACCAGTTTCTGTCACTACTTCCAGGTTGCGGCAAAAAAGAGGGCTAGAAGGCACCTTTCTGACACAGATGAATATATTGCACAGAATAATGAAAGCTGTTTGATGGATCCTTTGACCATGTCTACCGCTTACCAGAAGATGAAAACCCTGTGCATAAATCTTAGGAATGAGATCTATGCTGATATTCAGATTCATAATCAAAATATACTTCCTAGCTTTGTAGACCTGCCAAATCTTTCTGCTTCCATATACAGCACAGAGCTTTGCAATAGATTACGAGCCTTCCTCATATCTTGTCCACCGACAGGTCCATCATCACCAGTAGCAGAACTTGTCATTGCAACATCCGATTTTCAAAGAGATCTTTCAGGCTGGAACATTAATCCTATCAAAGGTGGAGTGGATGCAAAAGAGTTGTTCCATTTGTATATTCTTGTTTGGATCCAAGATAAACGTCTATCTTTGCTCGAGTCGTGCAAATTAGACAAGGTGAAATGGTCTGGTGTTAGAACACAGCATTCTACTACTCCCTTTGTTGATGACATGTATGAGCGGCTGAAGGAAACATTGACAGACTATGAGGTCATCATTTGCCGCTGGCCAGAATATACCTTGGTTCTAGAAAATGCAATAGCTGATATTGAGAAGGCGATTGTGGAAGCTTTAGATAAACAGTATGCGGATGTATTAGCTCCTCTTAAAGATAGCATGGCACCTAAGAAATTTGGGCTTAAATATGTCCAGAAACTTGCCAAACGGTCTACATGTGCCTATGTGGTTCCTGAGGAGGTTGGAATTCTTTTGAATTCCTTGAAGAGGATGCTCGACATCTTACGTCCAAGGATTGAATCACAGTTCAAATCATGGGCTTCTTGCTTACCAAATGCTGGAAACACAGCACCTGGTGAGCGACTTAGCGAAGTGACCGTGATGCTGAGAGCAAAGTTCAGGAACTACTTGCAGGCTATTGTGGAGAAACTCGTGGAAAATACGAAGTTACAGAATGCTACAAAATTAAAGAAGATTCTTCAAGATTCAAAGGAAACAGTGGTAGAGTCTGATTTAAAAAGTAGAATGCAACCACTGAAAGAGCAGTTAGCTAGTACCATAAGCTATCTTCACAGTATTTGTGAAACTCATGTTTTCATTGCCATCTGTCGAGGTTATTGGGACCGAATGGGACAGGAAATTTTGAGTTTCTTGGAGAACAGAAAAGAGAATAGATCATGGTATAAAGGTTCAAGGGTGGCTGTTTCTGTTCTGGATGATACATTTGCCTCACAGATGCAACAACTTCTAGGAAATGCGATACAAGAGAAAGACATGGAGGCACCTAGATGCATCATGGAGGTTCGTTCTATGCTATGTAAAGACGCTCCTAATCACAAGGACAACAGTTTTTACTATTAG

Protein sequence

>Msa0810930

MFTEGLDKNALRWVREKEVPFSNTAMRSRDPISGMKSGGGRGCGLPPPSKFRSGHLPANKLPVSAVETFDSGSNSDMDASVDSEEEVYGGRYSLDSSPQDNRVPNGAAKRYGNVAQMPRSRYASDYTFSDVSSSRETLTGRQGMTRDPVMRSAANGRQNGFTEDDSSDSAASSEFSTTQVGSSINGTLPKSRAYMSAGYASSVPSRMNVQSSAEKSGRLSDDEDEDIPSAPPFCGSTQEIRQTNEEIPTSATRSTPNKAESSTLKSVSRDKLENHGDASSEKFVRTATGSEGAASSNSQPPRLPTFHASALGPWYAVIAYDACARLCLHAWAMQCMEAPMFLENECSLLRDAFGLRQVLLQPEEELMVKCNGELSSEGVAPKLKKLIGKMKVQVRKVKVGLDPPTGCSMSSIVTHKIKMDSMRHHFSNLQSKLSSGWHALRKVRFVPHLPANGSLTHKSLAYVHASTRYIQQVSGLLKVGVTTLRNSSSSYEAVQETFTCFLRLKSVVEEDAIRLQPGSSEVHMFFPDSLGDDLLIEVQDSKGKHFGRVLVQVAAIADNPSDKVRWWNVYREPDHELVGKIQLYILYSTSADDNSHLKCGSVAETVAYDLVLEVAMKVQGFQQRNLELHGPWKWLLTEFASYYGVSEIYTKLRYLSYVMDVATPTADCLNLVYNLLAPVIMKGNSKTSLSHQENRLLGETKDEIEQILTLTFENYKSLDESSFSGIVEVFRPASSHAAPALEPAVKLYKLLHDILSPEAQTSFCHYFQVAAKKRARRHLSDTDEYIAQNNESCLMDPLTMSTAYQKMKTLCINLRNEIYADIQIHNQNILPSFVDLPNLSASIYSTELCNRLRAFLISCPPTGPSSPVAELVIATSDFQRDLSGWNINPIKGGVDAKELFHLYILVWIQDKRLSLLESCKLDKVKWSGVRTQHSTTPFVDDMYERLKETLTDYEVIICRWPEYTLVLENAIADIEKAIVEALDKQYADVLAPLKDSMAPKKFGLKYVQKLAKRSTCAYVVPEEVGILLNSLKRMLDILRPRIESQFKSWASCLPNAGNTAPGERLSEVTVMLRAKFRNYLQAIVEKLVENTKLQNATKLKKILQDSKETVVESDLKSRMQPLKEQLASTISYLHSICETHVFIAICRGYWDRMGQEILSFLENRKENRSWYKGSRVAVSVLDDTFASQMQQLLGNAIQEKDMEAPRCIMEVRSMLCKDAPNHKDNSFYY*