Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0781890 | sp|Q9FX32|SUS6_ARATH | 64.919 | 553 | 158 | 3 | 7 | 523 | 9 | 561 | 0.0 | 752 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0781890 | G7KFT7 | 91.592 | 559 | 11 | 3 | 1 | 523 | 1 | 559 | 0.0 | 1035 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0736440 | Msa0781890 | 0.803854 | 2.857060e-49 | -8.615850e-47 |
Msa0741970 | Msa0781890 | 0.819396 | 1.187085e-52 | -8.615850e-47 |
Msa0781890 | Msa0786230 | 0.818038 | 2.413941e-52 | -8.615850e-47 |
Msa0781890 | Msa0823170 | 0.839707 | 1.348849e-57 | -8.615850e-47 |
Msa0781890 | Msa0862170 | 0.814377 | 1.588982e-51 | -8.615850e-47 |
Msa0781890 | Msa1060340 | 0.824925 | 6.196675e-54 | -8.615850e-47 |
Msa0781890 | Msa1360930 | 0.804304 | 2.304134e-49 | -8.615850e-47 |
Msa0427820 | Msa0781890 | 0.816292 | 5.962747e-52 | -8.615850e-47 |
Msa0474060 | Msa0781890 | 0.816412 | 5.604304e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0781890 | MtrunA17_Chr5g0433761 | 91.592 | 559 | 11 | 3 | 1 | 523 | 1 | 559 | 0.0 | 1035 |
Msa0781890 | MtrunA17_Chr3g0109841 | 75.623 | 562 | 98 | 4 | 1 | 523 | 1 | 562 | 0.0 | 865 |
Msa0781890 | MtrunA17_Chr6g0481131 | 65.814 | 547 | 151 | 3 | 13 | 523 | 15 | 561 | 0.0 | 729 |
Msa0781890 | MtrunA17_Chr6g0481171 | 66.434 | 429 | 113 | 2 | 126 | 523 | 5 | 433 | 0.0 | 565 |
Msa0781890 | MtrunA17_Chr1g0195241 | 52.481 | 524 | 214 | 3 | 34 | 522 | 16 | 539 | 0.0 | 550 |
Msa0781890 | MtrunA17_Chr7g0269581 | 49.362 | 549 | 240 | 4 | 9 | 522 | 9 | 554 | 0.0 | 546 |
Msa0781890 | MtrunA17_Chr2g0301621 | 48.913 | 552 | 245 | 4 | 6 | 522 | 3 | 552 | 0.0 | 541 |
Msa0781890 | MtrunA17_Chr4g0070011 | 48.556 | 554 | 248 | 4 | 4 | 522 | 3 | 554 | 0.0 | 538 |
Msa0781890 | MtrunA17_Chr4g0009181 | 50.746 | 67 | 32 | 1 | 7 | 72 | 10 | 76 | 2.02e-16 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0781890 | AT1G73370.3 | 64.919 | 553 | 158 | 3 | 7 | 523 | 9 | 561 | 0.0 | 752 |
Msa0781890 | AT1G73370.1 | 64.919 | 553 | 158 | 3 | 7 | 523 | 9 | 561 | 0.0 | 752 |
Msa0781890 | AT5G37180.1 | 63.845 | 567 | 162 | 6 | 10 | 539 | 5 | 565 | 0.0 | 730 |
Msa0781890 | AT1G73370.2 | 65.571 | 517 | 142 | 3 | 43 | 523 | 1 | 517 | 0.0 | 700 |
Msa0781890 | AT4G02280.1 | 50.272 | 551 | 239 | 3 | 7 | 522 | 6 | 556 | 0.0 | 565 |
Msa0781890 | AT5G49190.1 | 48.829 | 555 | 237 | 5 | 9 | 522 | 5 | 553 | 0.0 | 538 |
Msa0781890 | AT5G49190.2 | 50.188 | 532 | 218 | 5 | 32 | 522 | 18 | 543 | 0.0 | 531 |
Msa0781890 | AT5G37180.2 | 68.074 | 379 | 88 | 3 | 192 | 539 | 1 | 377 | 0.0 | 530 |
Msa0781890 | AT5G49190.3 | 52.990 | 485 | 193 | 3 | 73 | 522 | 3 | 487 | 1.06e-178 | 521 |
Msa0781890 | AT5G20830.3 | 48.551 | 552 | 245 | 5 | 7 | 522 | 8 | 556 | 1.97e-176 | 518 |
Msa0781890 | AT5G20830.2 | 48.551 | 552 | 245 | 5 | 7 | 522 | 8 | 556 | 1.97e-176 | 518 |
Msa0781890 | AT5G20830.1 | 48.551 | 552 | 245 | 5 | 7 | 522 | 8 | 556 | 1.97e-176 | 518 |
Msa0781890 | AT3G43190.2 | 47.559 | 553 | 251 | 5 | 6 | 522 | 7 | 556 | 2.64e-173 | 510 |
Msa0781890 | AT3G43190.1 | 47.559 | 553 | 251 | 5 | 6 | 522 | 7 | 556 | 2.64e-173 | 510 |
Msa0781890 | AT5G37180.3 | 71.340 | 321 | 75 | 2 | 234 | 539 | 1 | 319 | 1.18e-164 | 480 |
Find 178 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCAGTTCATGGTTATTT+TGG | 0.070641 | 5_2:-64552712 | Msa0781890:CDS |
TGCAAACAAGTTGGTAAATA+TGG | 0.130999 | 5_2:-64549880 | Msa0781890:three_prime_UTR |
TTCCATTAGGTCCAAAATTT+TGG | 0.135688 | 5_2:+64551790 | None:intergenic |
TAATTTCTTATTCAAGAATT+TGG | 0.152548 | 5_2:-64549781 | Msa0781890:intron |
GGGCTATGTAGGGTTGTTTC+AGG | 0.160248 | 5_2:-64551248 | Msa0781890:CDS |
GAAGAAGACAAGGTTAATTT+AGG | 0.178184 | 5_2:+64554143 | None:intergenic |
GGACGCAACAACCAAAATTT+TGG | 0.199403 | 5_2:-64551801 | Msa0781890:CDS |
CTTGCCATCGAGAAGATTAT+TGG | 0.212816 | 5_2:+64550597 | None:intergenic |
GACTTTGGAGCATTTGATAT+TGG | 0.226670 | 5_2:-64554170 | Msa0781890:CDS |
AAATTTGGTGGCATCATTAA+TGG | 0.240820 | 5_2:-64551729 | Msa0781890:CDS |
CAAACCTTCCAGCAATTTCT+TGG | 0.245784 | 5_2:+64551424 | None:intergenic |
AAATTACACAGATGGAAATT+TGG | 0.250139 | 5_2:-64551744 | Msa0781890:CDS |
GGTTATTACTTGGAGCTTAA+TGG | 0.250589 | 5_2:-64548483 | Msa0781890:three_prime_UTR |
TTCAAGGACAACTGGGAAAT+TGG | 0.253007 | 5_2:-64554081 | Msa0781890:CDS |
TGACGTGAGAAGTGATATTT+AGG | 0.263286 | 5_2:+64551504 | None:intergenic |
GGGAAGCCAGATCTTGTTAT+TGG | 0.282391 | 5_2:-64551767 | Msa0781890:CDS |
TGGGGAACACTTACACCTTT+TGG | 0.282985 | 5_2:-64549860 | Msa0781890:three_prime_UTR |
CATGCTGCATTTACTCTTCC+AGG | 0.290131 | 5_2:-64551269 | Msa0781890:CDS |
GGTTGCTTGCCAACTGGTTT+TGG | 0.291946 | 5_2:+64549615 | None:intergenic |
CATATGTAGCCTTTGCAATT+AGG | 0.299383 | 5_2:-64554780 | Msa0781890:CDS |
ATCACTAATTTGAATATTGT+TGG | 0.299386 | 5_2:+64552736 | None:intergenic |
CATGAAACTTCAAGAATTAA+TGG | 0.308031 | 5_2:-64555143 | Msa0781890:CDS |
CTTCCTTTCAGGTTATTACT+TGG | 0.312619 | 5_2:-64548493 | Msa0781890:intron |
ACTTTGGAGCATTTGATATT+GGG | 0.313644 | 5_2:-64554169 | Msa0781890:CDS |
TTAACCTTGTCTTCTTCAAT+TGG | 0.317572 | 5_2:-64554137 | Msa0781890:CDS |
ATAACAGGTTGTTTACATAT+TGG | 0.318845 | 5_2:-64552359 | Msa0781890:intron |
TTAGTGATCTTCTCAGTTCA+TGG | 0.320915 | 5_2:-64552721 | Msa0781890:CDS |
TTCTTAACTTCAAGGACAAC+TGG | 0.323354 | 5_2:-64554089 | Msa0781890:CDS |
TTGTCTTCTTCAATTGGAAA+TGG | 0.326217 | 5_2:-64554131 | Msa0781890:CDS |
CTTTATCTTGTAGCTATACT+TGG | 0.335874 | 5_2:-64549911 | Msa0781890:intron |
CCTGCTTTGTATGAAGCATT+TGG | 0.338153 | 5_2:-64550300 | Msa0781890:three_prime_UTR |
TTTGGGCAAGCAGATGTTCT+TGG | 0.338987 | 5_2:-64552694 | Msa0781890:CDS |
AAATGAAAGAAATTATGTTT+TGG | 0.349393 | 5_2:-64555092 | Msa0781890:CDS |
TATCTCTTAATTTCTTTCAA+TGG | 0.354240 | 5_2:-64555287 | Msa0781890:exon |
TTTCAAAGTTCTTAACTTCA+AGG | 0.358243 | 5_2:-64554097 | Msa0781890:CDS |
GGTGAAATTGAGAGTGTCTT+TGG | 0.358348 | 5_2:+64551144 | None:intergenic |
ACACCCTTTCCTTGAATTTG+AGG | 0.366684 | 5_2:+64554680 | None:intergenic |
GCAAAGTAGACCCATCATAT+TGG | 0.374838 | 5_2:-64550119 | Msa0781890:three_prime_UTR |
ATCAAAAGATAGAGAGGAAA+TGG | 0.388957 | 5_2:-64550463 | Msa0781890:three_prime_UTR |
TCACTTCTCACGTCAATTCA+TGG | 0.389404 | 5_2:-64551496 | Msa0781890:CDS |
GGAGGTTCATCACTTGGAAT+AGG | 0.389616 | 5_2:+64549636 | None:intergenic |
ATAAGAAATTATAGAACATA+TGG | 0.396630 | 5_2:+64549793 | None:intergenic |
GCAAACAAGTTGGTAAATAT+GGG | 0.397058 | 5_2:-64549879 | Msa0781890:three_prime_UTR |
AGCAATTTCTTGGTATGTAC+TGG | 0.397249 | 5_2:+64551434 | None:intergenic |
TAAAGAATTTGTGCGCTTCA+AGG | 0.397654 | 5_2:+64555252 | None:intergenic |
ATTTCTAGGTTCACTGGATC+CGG | 0.401056 | 5_2:+64552775 | None:intergenic |
TCATTAATGGCTAGAAAACT+TGG | 0.402888 | 5_2:-64551716 | Msa0781890:CDS |
TTACTCTTCCAGGGCTATGT+AGG | 0.411179 | 5_2:-64551259 | Msa0781890:CDS |
TTAGGCCTAATCCAGGAGTC+TGG | 0.411626 | 5_2:-64554762 | Msa0781890:CDS |
TTCATTTATGCGCTGCAATC+CGG | 0.411646 | 5_2:+64550080 | None:intergenic |
TAGCAAAGCACTTCTTCATA+TGG | 0.418506 | 5_2:+64555191 | None:intergenic |
TGTTATCTACTTTGTTAAAG+AGG | 0.418907 | 5_2:+64551105 | None:intergenic |
ATAATTGTTGATGGTGTCTC+AGG | 0.422446 | 5_2:-64550207 | Msa0781890:three_prime_UTR |
TTTACCTGGCCACCAGTGTC+TGG | 0.422921 | 5_2:+64552667 | None:intergenic |
GATCTGGCTTCCCTTCCATT+AGG | 0.423211 | 5_2:+64551777 | None:intergenic |
AGACTCACCACAAGAATTTG+AGG | 0.424284 | 5_2:+64552271 | None:intergenic |
TGATCCTTCTCCCTTTCTCT+AGG | 0.427018 | 5_2:+64555164 | None:intergenic |
ACTTAAGTGGGTTAGTTGAA+TGG | 0.428392 | 5_2:-64550557 | Msa0781890:three_prime_UTR |
TAATTTCCAATAACAAGATC+TGG | 0.429386 | 5_2:+64551761 | None:intergenic |
CAATGTGGATTGTGAACGTC+TGG | 0.431421 | 5_2:+64548779 | None:intergenic |
ACGTAGAATGTGAGAGTGTT+TGG | 0.432164 | 5_2:+64552103 | None:intergenic |
AATGCATTTGAAGCAGACTT+TGG | 0.434330 | 5_2:-64554185 | Msa0781890:CDS |
GAAATCACGTTCCAATATGA+TGG | 0.435511 | 5_2:+64550108 | None:intergenic |
CTTCTTCCAAAGCCTTGACT+TGG | 0.437629 | 5_2:+64552335 | None:intergenic |
ATTGGACCAAGTCAAGGCTT+TGG | 0.438859 | 5_2:-64552341 | Msa0781890:CDS |
CTACTCTGCTTCAATGCATC+AGG | 0.439087 | 5_2:+64555217 | None:intergenic |
AGATAATGCAGGAAGGGTGA+AGG | 0.439483 | 5_2:-64552833 | Msa0781890:intron |
CGATGCATTGCTGACTCAAA+GGG | 0.446727 | 5_2:-64550336 | Msa0781890:three_prime_UTR |
ATTCCTTTCTCTGTATGAAA+AGG | 0.447223 | 5_2:+64552077 | None:intergenic |
CCATCAACAATTATTTCTGC+TGG | 0.448191 | 5_2:+64550216 | None:intergenic |
GGTTCACTGGATCCGGAGCT+TGG | 0.459186 | 5_2:+64552782 | None:intergenic |
CTTGCCAGACACTGGTGGCC+AGG | 0.463571 | 5_2:-64552671 | Msa0781890:intron |
TTTGTTAACTTGCTTCCAAA+AGG | 0.466022 | 5_2:+64549845 | None:intergenic |
GTGAACCTTGTCATAGTTGG+TGG | 0.468895 | 5_2:-64550504 | Msa0781890:three_prime_UTR |
CACTTAGTTCCTCTAGCATC+AGG | 0.468958 | 5_2:+64552155 | None:intergenic |
TGTACTGGTTATGATAAAAT+CGG | 0.469449 | 5_2:+64551449 | None:intergenic |
AGAGTTGGTTGCTTGCCAAC+TGG | 0.472054 | 5_2:+64549609 | None:intergenic |
TACTCTTCCAGGGCTATGTA+GGG | 0.473850 | 5_2:-64551258 | Msa0781890:CDS |
TACTCCCAGACTCCTGGATT+AGG | 0.474616 | 5_2:+64554757 | None:intergenic |
CATTGATTGGTTCAAACTCC+TGG | 0.474899 | 5_2:+64552129 | None:intergenic |
CACAGATTACCTCAAATTCA+AGG | 0.476544 | 5_2:-64554689 | Msa0781890:CDS |
GAGTGTTTGGTATCATTGAT+TGG | 0.478819 | 5_2:+64552116 | None:intergenic |
CGTACATACTCCCAGACTCC+TGG | 0.479613 | 5_2:+64554751 | None:intergenic |
CTTGAATTTGAGGTAATCTG+TGG | 0.479667 | 5_2:+64554690 | None:intergenic |
GAAAGGAATCTTGCGCCAAT+GGG | 0.483913 | 5_2:-64552063 | Msa0781890:intron |
AAGAGGAGATCTTCAATAGC+AGG | 0.484163 | 5_2:+64551122 | None:intergenic |
AGAAAGGAATCTTGCGCCAA+TGG | 0.485834 | 5_2:-64552064 | Msa0781890:CDS |
AGTACATACCAAGAAATTGC+TGG | 0.486522 | 5_2:-64551432 | Msa0781890:CDS |
CCAGCAGAAATAATTGTTGA+TGG | 0.490757 | 5_2:-64550216 | Msa0781890:three_prime_UTR |
ATGAAGACTCAGATGTTAAG+TGG | 0.491444 | 5_2:-64551539 | Msa0781890:CDS |
GTTCACAATCCACATTGAAA+AGG | 0.494536 | 5_2:-64548773 | Msa0781890:intron |
CTAATTGCAAAGGCTACATA+TGG | 0.497187 | 5_2:+64554781 | None:intergenic |
AGGTGCAGCTATATTGAACT+TGG | 0.502677 | 5_2:+64551208 | None:intergenic |
GAGCCTTGTTGTTTGAGAGT+TGG | 0.508078 | 5_2:+64549594 | None:intergenic |
GTTATTGGAAATTACACAGA+TGG | 0.508428 | 5_2:-64551752 | Msa0781890:CDS |
AGTGGGTTAGTTGAATGGTA+TGG | 0.508647 | 5_2:-64550552 | Msa0781890:three_prime_UTR |
GCATGGCTTTCATACTGTCC+AGG | 0.512596 | 5_2:+64551287 | None:intergenic |
TTGAATTTGAGGTAATCTGT+GGG | 0.512878 | 5_2:+64554691 | None:intergenic |
CTTGATTCATCTCCATTGAG+AGG | 0.513096 | 5_2:+64550171 | None:intergenic |
GGCTATGTAGGGTTGTTTCA+GGG | 0.514946 | 5_2:-64551247 | Msa0781890:CDS |
TTACCTCAAATTCAAGGAAA+GGG | 0.515471 | 5_2:-64554683 | Msa0781890:CDS |
GTTCTTGGCTTGCCAGACAC+TGG | 0.515609 | 5_2:-64552679 | Msa0781890:CDS |
ATCAGAAGTACTCCAAGCTC+CGG | 0.522664 | 5_2:-64552794 | Msa0781890:CDS |
TTCCACATTGATCCTCTCAA+TGG | 0.523550 | 5_2:-64550183 | Msa0781890:three_prime_UTR |
TCAAGAATTAATGGAAGAAG+TGG | 0.528474 | 5_2:-64555134 | Msa0781890:CDS |
GGCAAAAGCACAGACTATAG+TGG | 0.530206 | 5_2:-64554060 | Msa0781890:CDS |
CTTAACTTTGACAGGTAACA+AGG | 0.533143 | 5_2:-64552184 | Msa0781890:intron |
TTGTTAAAACTAAATCATCA+TGG | 0.535968 | 5_2:-64554032 | Msa0781890:CDS |
TTTGCTAAGTACCTAGAGAA+AGG | 0.536077 | 5_2:-64555175 | Msa0781890:CDS |
CCTTGATTAGTAGCAAAAGT+TGG | 0.536164 | 5_2:+64550243 | None:intergenic |
ATTACCTCAAATTCAAGGAA+AGG | 0.536681 | 5_2:-64554684 | Msa0781890:CDS |
TTGGTGAACCTTGTCATAGT+TGG | 0.540805 | 5_2:-64550507 | Msa0781890:three_prime_UTR |
CTCGGCTGCAAAGCTTCAGA+TGG | 0.543389 | 5_2:-64553874 | Msa0781890:CDS |
GAAGATCTATGCAAACAAGT+TGG | 0.543446 | 5_2:-64549889 | Msa0781890:three_prime_UTR |
TCGATGCATTGCTGACTCAA+AGG | 0.544831 | 5_2:-64550337 | Msa0781890:three_prime_UTR |
CTCTCAAACAACAAGGCTCT+AGG | 0.545501 | 5_2:-64549590 | Msa0781890:intron |
TTATAAACCAATATAAAAGA+AGG | 0.546347 | 5_2:+64548386 | None:intergenic |
GTGCGCTTCAAGGTATGTGT+TGG | 0.550745 | 5_2:+64555262 | None:intergenic |
TTACACAGATGGAAATTTGG+TGG | 0.550864 | 5_2:-64551741 | Msa0781890:CDS |
GAAACAACCCTACATAGCCC+TGG | 0.551996 | 5_2:+64551251 | None:intergenic |
GATGTTGTGAAGAACTTAAG+TGG | 0.553221 | 5_2:-64550570 | Msa0781890:three_prime_UTR |
TTCAAAATCAAAAGATAGAG+AGG | 0.553369 | 5_2:-64550469 | Msa0781890:three_prime_UTR |
CTTGGCTTGCCAGACACTGG+TGG | 0.554446 | 5_2:-64552676 | Msa0781890:CDS |
TAGGCCTAATCCAGGAGTCT+GGG | 0.556349 | 5_2:-64554761 | Msa0781890:CDS |
TTCTAAGAATTAAGCAACAA+GGG | 0.558053 | 5_2:-64552306 | Msa0781890:CDS |
TATAAACTCAGAAATAATGA+TGG | 0.559092 | 5_2:+64555337 | None:intergenic |
AACTAAAGGGACAATTCAGA+TGG | 0.563580 | 5_2:-64550401 | Msa0781890:three_prime_UTR |
TTATAAACCTCAAATTCTTG+TGG | 0.564326 | 5_2:-64552278 | Msa0781890:intron |
TTTGCAATTAGGCCTAATCC+AGG | 0.566483 | 5_2:-64554769 | Msa0781890:CDS |
CAATAATCTTCTCGATGGCA+AGG | 0.566855 | 5_2:-64550596 | Msa0781890:CDS |
GATAAATGACACGTTGAGCT+CGG | 0.568356 | 5_2:-64553892 | Msa0781890:CDS |
TTGCTAAGTACCTAGAGAAA+GGG | 0.568510 | 5_2:-64555174 | Msa0781890:CDS |
ATTGCAAAGGCTACATATGG+TGG | 0.571806 | 5_2:+64554784 | None:intergenic |
CCAAATGCTTCATACAAAGC+AGG | 0.573499 | 5_2:+64550300 | None:intergenic |
GATTGCAGCGCATAAATGAA+TGG | 0.573820 | 5_2:-64550077 | Msa0781890:intron |
GAATAAGAGACTAAGAAACT+TGG | 0.575984 | 5_2:-64550526 | Msa0781890:three_prime_UTR |
CTTTATATTGAGCTCTACAC+AGG | 0.580216 | 5_2:-64555056 | Msa0781890:intron |
TAGATACTTTGATCGGCACC+AGG | 0.582476 | 5_2:+64551188 | None:intergenic |
TCATGCTGAATATTGATCCT+CGG | 0.582916 | 5_2:-64548420 | Msa0781890:three_prime_UTR |
GTGGATATCTAGCAGAGAAG+AGG | 0.585549 | 5_2:-64550623 | Msa0781890:CDS |
ATGCTGCATTTACTCTTCCA+GGG | 0.587067 | 5_2:-64551268 | Msa0781890:CDS |
TCTTAACTTCAAGGACAACT+GGG | 0.587344 | 5_2:-64554088 | Msa0781890:CDS |
CATTAATGGCTAGAAAACTT+GGG | 0.588048 | 5_2:-64551715 | Msa0781890:CDS |
TGGAACGTGATTTCTGCGGC+CGG | 0.591424 | 5_2:-64550099 | Msa0781890:three_prime_UTR |
AAATCACGTTCCAATATGAT+GGG | 0.592482 | 5_2:+64550109 | None:intergenic |
GAAACCAATAATCTTCTCGA+TGG | 0.592864 | 5_2:-64550601 | Msa0781890:CDS |
ATTCTAAGAATTAAGCAACA+AGG | 0.594252 | 5_2:-64552307 | Msa0781890:CDS |
TTACATATTGGACCAAGTCA+AGG | 0.606244 | 5_2:-64552347 | Msa0781890:CDS |
TAGAAAACTTGGGATAACTC+AGG | 0.607985 | 5_2:-64551705 | Msa0781890:intron |
TAGAGGAACTAAGTGCCACC+AGG | 0.609338 | 5_2:-64552147 | Msa0781890:CDS |
CAAACAAGTTGGTAAATATG+GGG | 0.611526 | 5_2:-64549878 | Msa0781890:three_prime_UTR |
TGGATTAGGCCTAATTGCAA+AGG | 0.614592 | 5_2:+64554771 | None:intergenic |
ATTTCCAATTGAAGAAGACA+AGG | 0.616302 | 5_2:+64554133 | None:intergenic |
CTCAGAGGACCTCTCTGTTG+AGG | 0.621036 | 5_2:-64554722 | Msa0781890:CDS |
AGTACCTAGAGAAAGGGAGA+AGG | 0.621869 | 5_2:-64555168 | Msa0781890:CDS |
AGTTAACAAAGAGCAAAATG+AGG | 0.623039 | 5_2:-64549832 | Msa0781890:three_prime_UTR |
ATGTTGTGAAGAACTTAAGT+GGG | 0.624389 | 5_2:-64550569 | Msa0781890:three_prime_UTR |
GATGAACCTCCAAAACCAGT+TGG | 0.627880 | 5_2:-64549624 | Msa0781890:three_prime_UTR |
CAACCAACTCTCAAACAACA+AGG | 0.628977 | 5_2:-64549597 | Msa0781890:three_prime_UTR |
AGAGGAGATCTTCAATAGCA+GGG | 0.629949 | 5_2:+64551123 | None:intergenic |
AAGTTCAATATAGCTGCACC+TGG | 0.631221 | 5_2:-64551206 | Msa0781890:CDS |
AGGGAAATAGATACTTTGAT+CGG | 0.639658 | 5_2:+64551181 | None:intergenic |
GGTGCAGCTATATTGAACTT+GGG | 0.641192 | 5_2:+64551209 | None:intergenic |
GAATTTGAGGTAATCTGTGG+GGG | 0.644323 | 5_2:+64554693 | None:intergenic |
CTGGAAGAGTAAATGCAGCA+TGG | 0.646190 | 5_2:+64551270 | None:intergenic |
TGATTGGTTCAAACTCCTGG+TGG | 0.652035 | 5_2:+64552132 | None:intergenic |
CATACCAAGAAATTGCTGGA+AGG | 0.653894 | 5_2:-64551428 | Msa0781890:intron |
TGAATTTGAGGTAATCTGTG+GGG | 0.661174 | 5_2:+64554692 | None:intergenic |
TGAATAAAATGATGTGTGTG+AGG | 0.667077 | 5_2:-64548302 | Msa0781890:three_prime_UTR |
AGAAGGTGTATATACATCCG+AGG | 0.668922 | 5_2:+64548403 | None:intergenic |
CTCCATTGAGAGGATCAATG+TGG | 0.693616 | 5_2:+64550181 | None:intergenic |
GTCATTGAAGCAATGAACTG+TGG | 0.697770 | 5_2:-64550270 | Msa0781890:three_prime_UTR |
CAGACTGATCGATATCGCAA+CGG | 0.702884 | 5_2:-64550369 | Msa0781890:three_prime_UTR |
GTATGTACGTGTCAACTCAG+AGG | 0.705934 | 5_2:-64554737 | Msa0781890:CDS |
ATATTGGAACGTGATTTCTG+CGG | 0.707520 | 5_2:-64550103 | Msa0781890:three_prime_UTR |
AGAAGCCACCAACTATGACA+AGG | 0.713700 | 5_2:+64550499 | None:intergenic |
GGGTGATAGCCTCAACAGAG+AGG | 0.723003 | 5_2:+64554713 | None:intergenic |
AGGTTGATACCTGATGCTAG+AGG | 0.743701 | 5_2:-64552164 | Msa0781890:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATATTTTGTCTAAT+AGG | - | chr5_2:64548615-64548634 | Msa0781890:intron | 10.0% |
!!! | TCAAGAATAATATTTTTTTT+GGG | + | chr5_2:64550110-64550129 | None:intergenic | 10.0% |
!!! | TTCAAGAATAATATTTTTTT+TGG | + | chr5_2:64550111-64550130 | None:intergenic | 10.0% |
!!! | ATAATTTTTATTGTTGAAAA+AGG | + | chr5_2:64550308-64550327 | None:intergenic | 10.0% |
!!! | AAAATTGAACAATTTTTATA+AGG | - | chr5_2:64550594-64550613 | Msa0781890:CDS | 10.0% |
!! | AAACAAACATATTAAATTTA+AGG | + | chr5_2:64550667-64550686 | None:intergenic | 10.0% |
!!! | AATTTTAATTATAAGTAGTA+AGG | - | chr5_2:64551023-64551042 | Msa0781890:intron | 10.0% |
!! | AACAAATATTAATAAATGAA+AGG | + | chr5_2:64552257-64552276 | None:intergenic | 10.0% |
!! | AACAGTAAAAAAAAATTAAA+GGG | + | chr5_2:64553644-64553663 | None:intergenic | 10.0% |
!! | AAACAGTAAAAAAAAATTAA+AGG | + | chr5_2:64553645-64553664 | None:intergenic | 10.0% |
!! | CAAATAAAAAAATATTGTTT+CGG | - | chr5_2:64554135-64554154 | Msa0781890:CDS | 10.0% |
!! | AAGATTATATAAATAAATCT+AGG | + | chr5_2:64555082-64555101 | None:intergenic | 10.0% |
!! | TAGATTTATTTATATAATCT+TGG | - | chr5_2:64555081-64555100 | Msa0781890:CDS | 10.0% |
!!! | AAATGAAAGAAATTATGTTT+TGG | - | chr5_2:64548554-64548573 | Msa0781890:intron | 15.0% |
!!! | TTAACATTTTCTATATTGTA+GGG | - | chr5_2:64549427-64549446 | Msa0781890:intron | 15.0% |
!!! | CAAGAATAATATTTTTTTTG+GGG | + | chr5_2:64550109-64550128 | None:intergenic | 15.0% |
!! | ATTGATAGATTTATTTGTAT+TGG | - | chr5_2:64550245-64550264 | Msa0781890:three_prime_UTR | 15.0% |
!! | AAACAATTATTGATGAAATT+GGG | - | chr5_2:64550421-64550440 | Msa0781890:three_prime_UTR | 15.0% |
!! | TAATCTCTAACAAAAAATTA+AGG | + | chr5_2:64550523-64550542 | None:intergenic | 15.0% |
!! | ACCTAAAAAAATGAAATTTA+TGG | - | chr5_2:64550622-64550641 | Msa0781890:CDS | 15.0% |
!! | CCTAAAAAAATGAAATTTAT+GGG | - | chr5_2:64550623-64550642 | Msa0781890:CDS | 15.0% |
!! | AAAAAATTCTTCTTTATAGT+TGG | - | chr5_2:64550692-64550711 | Msa0781890:intron | 15.0% |
!! | ATTAAAATTAATGTTCCTTA+TGG | + | chr5_2:64551012-64551031 | None:intergenic | 15.0% |
!!! | AAAACTAAAGTATTAAAAGT+TGG | - | chr5_2:64551225-64551244 | Msa0781890:CDS | 15.0% |
!! | ATTAATATCAACCAAAATAT+TGG | + | chr5_2:64551824-64551843 | None:intergenic | 15.0% |
!!! | ATATTTTGGTTGATATTAAT+AGG | - | chr5_2:64551824-64551843 | Msa0781890:intron | 15.0% |
!! | ATAAGAAATTATAGAACATA+TGG | + | chr5_2:64553856-64553875 | None:intergenic | 15.0% |
!! | TAATTTCTTATTCAAGAATT+TGG | - | chr5_2:64553865-64553884 | Msa0781890:CDS | 15.0% |
!!! | ATTTTGTTTTAGAATTTTAG+AGG | - | chr5_2:64554093-64554112 | Msa0781890:CDS | 15.0% |
!!! | CATTTTGAAACAATTTTTTT+TGG | + | chr5_2:64554498-64554517 | None:intergenic | 15.0% |
!! | AAAAAAAGTTATTATTGCAT+TGG | + | chr5_2:64554538-64554557 | None:intergenic | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr5_2:64554600-64554619 | None:intergenic | 15.0% |
!! | AAACTAACAAATAGTTAATA+AGG | - | chr5_2:64554614-64554633 | Msa0781890:intron | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | - | chr5_2:64554623-64554642 | Msa0781890:intron | 15.0% |
!! | ACAAAAATAGAAAGAATTTA+CGG | + | chr5_2:64554751-64554770 | None:intergenic | 15.0% |
!! | TTATAAACCAATATAAAAGA+AGG | + | chr5_2:64555263-64555282 | None:intergenic | 15.0% |
!! | TATAAACTCAGAAATAATGA+TGG | + | chr5_2:64548312-64548331 | None:intergenic | 20.0% |
!! | TATCTCTTAATTTCTTTCAA+TGG | - | chr5_2:64548359-64548378 | Msa0781890:three_prime_UTR | 20.0% |
!!! | CTTAACATTTTCTATATTGT+AGG | - | chr5_2:64549426-64549445 | Msa0781890:intron | 20.0% |
!! | TTGTTAAAACTAAATCATCA+TGG | - | chr5_2:64549614-64549633 | Msa0781890:three_prime_UTR | 20.0% |
!! | TATAATTCTTCGTAATATCA+AGG | + | chr5_2:64549934-64549953 | None:intergenic | 20.0% |
!! | ATAGTTATATACTTCTGATA+TGG | - | chr5_2:64549951-64549970 | Msa0781890:intron | 20.0% |
!! | CAAGTAGAGTTTAAAAAAAA+AGG | + | chr5_2:64550034-64550053 | None:intergenic | 20.0% |
!! | AATATTATTCTTGAAGTAGT+CGG | - | chr5_2:64550116-64550135 | Msa0781890:three_prime_UTR | 20.0% |
!! | TAGCTCAATGTTTATTATTT+GGG | + | chr5_2:64550163-64550182 | None:intergenic | 20.0% |
!! | AGACAATAGTCATAATTAAA+TGG | - | chr5_2:64550330-64550349 | Msa0781890:three_prime_UTR | 20.0% |
!! | CAAACAATTATTGATGAAAT+TGG | - | chr5_2:64550420-64550439 | Msa0781890:three_prime_UTR | 20.0% |
!! | GACTAAAATTAACAAATCTT+AGG | + | chr5_2:64550501-64550520 | None:intergenic | 20.0% |
!!! | CCCATAAATTTCATTTTTTT+AGG | + | chr5_2:64550626-64550645 | None:intergenic | 20.0% |
!! | TGAAAATAAAATTGGCATTA+GGG | + | chr5_2:64550759-64550778 | None:intergenic | 20.0% |
!! | CTTTAACCTGAAAATAAAAT+TGG | + | chr5_2:64550767-64550786 | None:intergenic | 20.0% |
!!! | CAATTTTATTTTCAGGTTAA+AGG | - | chr5_2:64550765-64550784 | Msa0781890:intron | 20.0% |
!! | ATCACTAATTTGAATATTGT+TGG | + | chr5_2:64550913-64550932 | None:intergenic | 20.0% |
!!! | TTTACTTCTTACCAATATTT+TGG | - | chr5_2:64551810-64551829 | Msa0781890:intron | 20.0% |
!! | TTGAAAGGAAAACTAAATAA+AGG | + | chr5_2:64551985-64552004 | None:intergenic | 20.0% |
!!! | TTTTCCTTTCAATATTTTTG+TGG | - | chr5_2:64551993-64552012 | Msa0781890:intron | 20.0% |
!!! | ATTCGCTTTTGAAATTATTA+TGG | - | chr5_2:64552950-64552969 | Msa0781890:intron | 20.0% |
!!! | ATTCGCTTTTGAAATTATTA+TGG | - | chr5_2:64552950-64552969 | Msa0781890:intron | 20.0% |
!! | AATTGAAAAACATCAACTAA+AGG | - | chr5_2:64553231-64553250 | Msa0781890:intron | 20.0% |
!! | ATTGAAAAACATCAACTAAA+GGG | - | chr5_2:64553232-64553251 | Msa0781890:intron | 20.0% |
!!! | AAAATTAATTTTCTTGCTGA+TGG | + | chr5_2:64553701-64553720 | None:intergenic | 20.0% |
!! | AGATATGATTTACCATATAA+AGG | + | chr5_2:64554215-64554234 | None:intergenic | 20.0% |
!!! | CATTTTTCTCTCATTATTAT+CGG | + | chr5_2:64554368-64554387 | None:intergenic | 20.0% |
!! | ATTGAAAAGGTTAGATTTAT+GGG | - | chr5_2:64554886-64554905 | Msa0781890:intron | 20.0% |
!!! | ATATACACCTTCTTTTATAT+TGG | - | chr5_2:64555253-64555272 | Msa0781890:CDS | 20.0% |
! | CATGAAACTTCAAGAATTAA+TGG | - | chr5_2:64548503-64548522 | Msa0781890:intron | 25.0% |
!!! | TGAAAGAAATTATGTTTTGG+AGG | - | chr5_2:64548557-64548576 | Msa0781890:intron | 25.0% |
!!! | GAAAGAAATTATGTTTTGGA+GGG | - | chr5_2:64548558-64548577 | Msa0781890:intron | 25.0% |
!!! | TTTTTGATTACTCAATGTGT+TGG | + | chr5_2:64548748-64548767 | None:intergenic | 25.0% |
!!! | TTAGCCTTTGAATTTTAATG+TGG | - | chr5_2:64548807-64548826 | Msa0781890:intron | 25.0% |
! | CTGTTTGAATATCTTATGTA+AGG | - | chr5_2:64549059-64549078 | Msa0781890:intron | 25.0% |
!! | GTTAAGTGAATCTATCTTTT+TGG | + | chr5_2:64549393-64549412 | None:intergenic | 25.0% |
! | TTTCAAAGTTCTTAACTTCA+AGG | - | chr5_2:64549549-64549568 | Msa0781890:intron | 25.0% |
! | AAAGTATATGTAAACGTTGT+TGG | + | chr5_2:64549687-64549706 | None:intergenic | 25.0% |
!!! | TTTTGATATGAAGTGTCTTT+TGG | + | chr5_2:64549833-64549852 | None:intergenic | 25.0% |
! | CATATCAAAAATTTGAGCTA+AGG | - | chr5_2:64549843-64549862 | Msa0781890:three_prime_UTR | 25.0% |
! | ACCAACTATGTTTATAATCT+TGG | - | chr5_2:64549896-64549915 | Msa0781890:three_prime_UTR | 25.0% |
! | ACCAAGATTATAAACATAGT+TGG | + | chr5_2:64549900-64549919 | None:intergenic | 25.0% |
! | AGCTCAATGTTTATTATTTG+GGG | + | chr5_2:64550162-64550181 | None:intergenic | 25.0% |
! | GTAGCTCAATGTTTATTATT+TGG | + | chr5_2:64550164-64550183 | None:intergenic | 25.0% |
!! | TTTGCAATTAAACTTGTTTG+GGG | + | chr5_2:64550186-64550205 | None:intergenic | 25.0% |
!! | GTTTGCAATTAAACTTGTTT+GGG | + | chr5_2:64550187-64550206 | None:intergenic | 25.0% |
!! | TGTTTGCAATTAAACTTGTT+TGG | + | chr5_2:64550188-64550207 | None:intergenic | 25.0% |
!!! | TTGTATTGGTTTGATACTTT+CGG | - | chr5_2:64550259-64550278 | Msa0781890:three_prime_UTR | 25.0% |
!! | TTTTGCCCAACATTTTTAAA+TGG | - | chr5_2:64550457-64550476 | Msa0781890:three_prime_UTR | 25.0% |
! | AATCGCCATTTAAAAATGTT+GGG | + | chr5_2:64550465-64550484 | None:intergenic | 25.0% |
! | AAATCGCCATTTAAAAATGT+TGG | + | chr5_2:64550466-64550485 | None:intergenic | 25.0% |
! | CTGAAAATAAAATTGGCATT+AGG | + | chr5_2:64550760-64550779 | None:intergenic | 25.0% |
!!! | CTAATGCCAATTTTATTTTC+AGG | - | chr5_2:64550758-64550777 | Msa0781890:intron | 25.0% |
!!! | AAAAATATTTCTAGGTTCAC+TGG | + | chr5_2:64550880-64550899 | None:intergenic | 25.0% |
! | TTCTGCTGAAAAATATTTCT+AGG | + | chr5_2:64550888-64550907 | None:intergenic | 25.0% |
!!! | AGTAGTAAGGTTTTAAATCA+CGG | - | chr5_2:64551036-64551055 | Msa0781890:intron | 25.0% |
!!! | TGTAAACAACCTGTTATTTT+TGG | + | chr5_2:64551284-64551303 | None:intergenic | 25.0% |
! | ATAACAGGTTGTTTACATAT+TGG | - | chr5_2:64551287-64551306 | Msa0781890:CDS | 25.0% |
!! | ATTCTAAGAATTAAGCAACA+AGG | - | chr5_2:64551339-64551358 | Msa0781890:intron | 25.0% |
!! | TTCTAAGAATTAAGCAACAA+GGG | - | chr5_2:64551340-64551359 | Msa0781890:intron | 25.0% |
! | TTATAAACCTCAAATTCTTG+TGG | - | chr5_2:64551368-64551387 | Msa0781890:intron | 25.0% |
! | AATATACTCTTAACTTTGAC+AGG | - | chr5_2:64551454-64551473 | Msa0781890:CDS | 25.0% |
! | TAATTTCCAATAACAAGATC+TGG | + | chr5_2:64551888-64551907 | None:intergenic | 25.0% |
! | AAATTACACAGATGGAAATT+TGG | - | chr5_2:64551902-64551921 | Msa0781890:intron | 25.0% |
! | TTTCAATCACAATAAGGAAT+TGG | + | chr5_2:64552048-64552067 | None:intergenic | 25.0% |
!! | CCTAATTTTCAATCACAATA+AGG | + | chr5_2:64552054-64552073 | None:intergenic | 25.0% |
! | CCTTATTGTGATTGAAAATT+AGG | - | chr5_2:64552051-64552070 | Msa0781890:intron | 25.0% |
!!! | TGTACTGGTTATGATAAAAT+CGG | + | chr5_2:64552200-64552219 | None:intergenic | 25.0% |
! | TGTTATCTACTTTGTTAAAG+AGG | + | chr5_2:64552544-64552563 | None:intergenic | 25.0% |
! | TACTATCTTAGAATTTGAGT+TGG | + | chr5_2:64552716-64552735 | None:intergenic | 25.0% |
!! | AGCTGAAAGTTTTCAAATTT+CGG | + | chr5_2:64552893-64552912 | None:intergenic | 25.0% |
! | AAAAGCGAATATCAATCAAT+TGG | + | chr5_2:64552940-64552959 | None:intergenic | 25.0% |
! | TGAAATTATTATGGAAACAG+TGG | - | chr5_2:64552959-64552978 | Msa0781890:intron | 25.0% |
! | TGAAATTATTATGGAAACAG+TGG | - | chr5_2:64552959-64552978 | Msa0781890:intron | 25.0% |
!!! | CTCTATCTTTTGATTTTGAA+GGG | + | chr5_2:64553177-64553196 | None:intergenic | 25.0% |
!!! | TCTCTATCTTTTGATTTTGA+AGG | + | chr5_2:64553178-64553197 | None:intergenic | 25.0% |
! | TTCAAAATCAAAAGATAGAG+AGG | - | chr5_2:64553177-64553196 | Msa0781890:intron | 25.0% |
!! | ATTAAAGGGTCTTGTAAAAA+TGG | + | chr5_2:64553630-64553649 | None:intergenic | 25.0% |
! | AAAACTCACTATGCAATAAT+TGG | + | chr5_2:64553930-64553949 | None:intergenic | 25.0% |
! | GAATAATCTCAACCTTTATA+TGG | - | chr5_2:64554200-64554219 | Msa0781890:CDS | 25.0% |
! | CGAATGTATATAGTCTAATT+TGG | + | chr5_2:64554263-64554282 | None:intergenic | 25.0% |
! | AGAGACACATAAATCTTATA+AGG | + | chr5_2:64554299-64554318 | None:intergenic | 25.0% |
! | TTATAAGATTTATGTGTCTC+TGG | - | chr5_2:64554298-64554317 | Msa0781890:intron | 25.0% |
! | TGTTAGCATGAAAAATCAAA+TGG | + | chr5_2:64554810-64554829 | None:intergenic | 25.0% |
!!! | TTCTTTTTTCCTTTTCTTCT+TGG | - | chr5_2:64554835-64554854 | Msa0781890:intron | 25.0% |
!! | TAAATCTAACCTTTTCAATG+TGG | + | chr5_2:64554885-64554904 | None:intergenic | 25.0% |
! | CATTGAAAAGGTTAGATTTA+TGG | - | chr5_2:64554885-64554904 | Msa0781890:intron | 25.0% |
!! | AAGACATAATTTCCTTTTGT+GGG | + | chr5_2:64554950-64554969 | None:intergenic | 25.0% |
!!! | AAGCAAGTGTTTTTTTAGTA+AGG | + | chr5_2:64555136-64555155 | None:intergenic | 25.0% |
TCAAGAATTAATGGAAGAAG+TGG | - | chr5_2:64548512-64548531 | Msa0781890:intron | 30.0% | |
TGCACCACATTAAAATTCAA+AGG | + | chr5_2:64548814-64548833 | None:intergenic | 30.0% | |
! | TTGAATTTGAGGTAATCTGT+GGG | + | chr5_2:64548958-64548977 | None:intergenic | 30.0% |
ATTACCTCAAATTCAAGGAA+AGG | - | chr5_2:64548962-64548981 | Msa0781890:intron | 30.0% | |
TTACCTCAAATTCAAGGAAA+GGG | - | chr5_2:64548963-64548982 | Msa0781890:intron | 30.0% | |
! | GAGAAATGACATACCATTTT+TGG | + | chr5_2:64548996-64549015 | None:intergenic | 30.0% |
! | AAGCGGTCTTTTATAAACAT+CGG | + | chr5_2:64549200-64549219 | None:intergenic | 30.0% |
!! | AGTGAATCTATCTTTTTGGT+AGG | + | chr5_2:64549389-64549408 | None:intergenic | 30.0% |
AATGTTAAGCATCAAAAGCA+AGG | + | chr5_2:64549415-64549434 | None:intergenic | 30.0% | |
!! | ACTTTGGAGCATTTGATATT+GGG | - | chr5_2:64549477-64549496 | Msa0781890:intron | 30.0% |
GAAGAAGACAAGGTTAATTT+AGG | + | chr5_2:64549506-64549525 | None:intergenic | 30.0% | |
TTAACCTTGTCTTCTTCAAT+TGG | - | chr5_2:64549509-64549528 | Msa0781890:intron | 30.0% | |
ATTTCCAATTGAAGAAGACA+AGG | + | chr5_2:64549516-64549535 | None:intergenic | 30.0% | |
TTGTCTTCTTCAATTGGAAA+TGG | - | chr5_2:64549515-64549534 | Msa0781890:intron | 30.0% | |
!!! | CAAGGTTTTTTTTTAAGTCG+CGG | + | chr5_2:64549983-64550002 | None:intergenic | 30.0% |
! | TGTTTATTATTTGGGGTAGT+CGG | + | chr5_2:64550155-64550174 | None:intergenic | 30.0% |
! | TTAAATGGACAACGAGTTTT+TGG | - | chr5_2:64550345-64550364 | Msa0781890:three_prime_UTR | 30.0% |
AGCTTGCAAAAAATTTATGC+AGG | + | chr5_2:64550720-64550739 | None:intergenic | 30.0% | |
!!! | TTATTTTCAGGTTAAAGGAG+TGG | - | chr5_2:64550770-64550789 | Msa0781890:intron | 30.0% |
!!! | TATTTTCAGGTTAAAGGAGT+GGG | - | chr5_2:64550771-64550790 | Msa0781890:intron | 30.0% |
! | TTCTCAGTTCATGGTTATTT+TGG | - | chr5_2:64550934-64550953 | Msa0781890:intron | 30.0% |
!! | TCTCAGTTCATGGTTATTTT+GGG | - | chr5_2:64550935-64550954 | Msa0781890:intron | 30.0% |
! | CTTATGGTAGAAATTTTACC+TGG | + | chr5_2:64550996-64551015 | None:intergenic | 30.0% |
CAGGTAAAATTTCTACCATA+AGG | - | chr5_2:64550994-64551013 | Msa0781890:intron | 30.0% | |
AAGAATTGCATCTACGATTT+GGG | + | chr5_2:64551171-64551190 | None:intergenic | 30.0% | |
AAAGAATTGCATCTACGATT+TGG | + | chr5_2:64551172-64551191 | None:intergenic | 30.0% | |
ATTCCTTTCTCTGTATGAAA+AGG | + | chr5_2:64551572-64551591 | None:intergenic | 30.0% | |
GAGTAAACTTCTCAAGATAA+GGG | + | chr5_2:64551628-64551647 | None:intergenic | 30.0% | |
TGAGTAAACTTCTCAAGATA+AGG | + | chr5_2:64551629-64551648 | None:intergenic | 30.0% | |
TTATCTTGAGAAGTTTACTC+AGG | - | chr5_2:64551628-64551647 | Msa0781890:intron | 30.0% | |
!! | CAAAGCATAGTTCTAAACTA+TGG | + | chr5_2:64551768-64551787 | None:intergenic | 30.0% |
AAAGTTCATAAGAGAGGAAA+AGG | + | chr5_2:64551793-64551812 | None:intergenic | 30.0% | |
AGAAGTAAAGTTCATAAGAG+AGG | + | chr5_2:64551799-64551818 | None:intergenic | 30.0% | |
! | AACCAAAATTTTGGACCTAA+TGG | - | chr5_2:64551854-64551873 | Msa0781890:intron | 30.0% |
! | TTCCATTAGGTCCAAAATTT+TGG | + | chr5_2:64551859-64551878 | None:intergenic | 30.0% |
! | AAAATTTTGGACCTAATGGA+AGG | - | chr5_2:64551858-64551877 | Msa0781890:intron | 30.0% |
! | AAATTTTGGACCTAATGGAA+GGG | - | chr5_2:64551859-64551878 | Msa0781890:intron | 30.0% |
GTTATTGGAAATTACACAGA+TGG | - | chr5_2:64551894-64551913 | Msa0781890:intron | 30.0% | |
! | AAATTTGGTGGCATCATTAA+TGG | - | chr5_2:64551917-64551936 | Msa0781890:intron | 30.0% |
TCATTAATGGCTAGAAAACT+TGG | - | chr5_2:64551930-64551949 | Msa0781890:intron | 30.0% | |
CATTAATGGCTAGAAAACTT+GGG | - | chr5_2:64551931-64551950 | Msa0781890:intron | 30.0% | |
AGGGAAATAGATACTTTGAT+CGG | + | chr5_2:64552468-64552487 | None:intergenic | 30.0% | |
!! | TTTGGTCTTTTTCTGTGTAA+GGG | + | chr5_2:64552487-64552506 | None:intergenic | 30.0% |
CAGAAAAGTTTAATGTGCAA+GGG | + | chr5_2:64552596-64552615 | None:intergenic | 30.0% | |
ACAGAAAAGTTTAATGTGCA+AGG | + | chr5_2:64552597-64552616 | None:intergenic | 30.0% | |
TCTGTTAAAAGACTCATTTG+AGG | - | chr5_2:64552612-64552631 | Msa0781890:intron | 30.0% | |
! | AAAGTTTTCAAATTTCGGCT+TGG | + | chr5_2:64552888-64552907 | None:intergenic | 30.0% |
ATGTTGTGAAGAACTTAAGT+GGG | - | chr5_2:64553077-64553096 | Msa0781890:intron | 30.0% | |
GAATAAGAGACTAAGAAACT+TGG | - | chr5_2:64553120-64553139 | Msa0781890:intron | 30.0% | |
ATCAAAAGATAGAGAGGAAA+TGG | - | chr5_2:64553183-64553202 | Msa0781890:intron | 30.0% | |
AAATCACGTTCCAATATGAT+GGG | + | chr5_2:64553540-64553559 | None:intergenic | 30.0% | |
CTTTATCTTGTAGCTATACT+TGG | - | chr5_2:64553735-64553754 | Msa0781890:intron | 30.0% | |
!! | TGCAAACAAGTTGGTAAATA+TGG | - | chr5_2:64553766-64553785 | Msa0781890:intron | 30.0% |
!! | GCAAACAAGTTGGTAAATAT+GGG | - | chr5_2:64553767-64553786 | Msa0781890:intron | 30.0% |
!! | CAAACAAGTTGGTAAATATG+GGG | - | chr5_2:64553768-64553787 | Msa0781890:intron | 30.0% |
!! | TTTGTTAACTTGCTTCCAAA+AGG | + | chr5_2:64553804-64553823 | None:intergenic | 30.0% |
AGTTAACAAAGAGCAAAATG+AGG | - | chr5_2:64553814-64553833 | Msa0781890:CDS | 30.0% | |
! | GAATTTGGTTAGTCAATGTT+TGG | - | chr5_2:64553880-64553899 | Msa0781890:CDS | 30.0% |
TGACTTGACATTCATACATA+TGG | + | chr5_2:64554406-64554425 | None:intergenic | 30.0% | |
!! | AAACGACACTCATTTTGAAA+CGG | - | chr5_2:64554706-64554725 | Msa0781890:CDS | 30.0% |
! | CAATTTTCTTAACTGCACAA+AGG | + | chr5_2:64554783-64554802 | None:intergenic | 30.0% |
! | CAAGACATAATTTCCTTTTG+TGG | + | chr5_2:64554951-64554970 | None:intergenic | 30.0% |
! | AAAAGTAGCAACTTTTGCAT+TGG | + | chr5_2:64555018-64555037 | None:intergenic | 30.0% |
TGAATAAAATGATGTGTGTG+AGG | - | chr5_2:64555344-64555363 | Msa0781890:five_prime_UTR | 30.0% | |
TAAAGAATTTGTGCGCTTCA+AGG | + | chr5_2:64548397-64548416 | None:intergenic | 35.0% | |
! | TAGCAAAGCACTTCTTCATA+TGG | + | chr5_2:64548458-64548477 | None:intergenic | 35.0% |
TTTGCTAAGTACCTAGAGAA+AGG | - | chr5_2:64548471-64548490 | Msa0781890:three_prime_UTR | 35.0% | |
TTGCTAAGTACCTAGAGAAA+GGG | - | chr5_2:64548472-64548491 | Msa0781890:three_prime_UTR | 35.0% | |
!!! | TATGTTTTGGAGGGAAATCT+TGG | - | chr5_2:64548567-64548586 | Msa0781890:intron | 35.0% |
CTTTATATTGAGCTCTACAC+AGG | - | chr5_2:64548590-64548609 | Msa0781890:intron | 35.0% | |
CTAATTGCAAAGGCTACATA+TGG | + | chr5_2:64548868-64548887 | None:intergenic | 35.0% | |
CATATGTAGCCTTTGCAATT+AGG | - | chr5_2:64548866-64548885 | Msa0781890:intron | 35.0% | |
! | TGAATTTGAGGTAATCTGTG+GGG | + | chr5_2:64548957-64548976 | None:intergenic | 35.0% |
! | CTTGAATTTGAGGTAATCTG+TGG | + | chr5_2:64548959-64548978 | None:intergenic | 35.0% |
CACAGATTACCTCAAATTCA+AGG | - | chr5_2:64548957-64548976 | Msa0781890:intron | 35.0% | |
! | AAAGGGTGTATGACCAAAAA+TGG | - | chr5_2:64548980-64548999 | Msa0781890:intron | 35.0% |
CTAATTGTGACACAAAGAGT+TGG | + | chr5_2:64549131-64549150 | None:intergenic | 35.0% | |
TGTCACAATTAGCAGATAAC+TGG | - | chr5_2:64549139-64549158 | Msa0781890:intron | 35.0% | |
TTTATAAAAGACCGCTTGCT+AGG | - | chr5_2:64549203-64549222 | Msa0781890:intron | 35.0% | |
AGCTACTAACTAATCTTTCG+AGG | + | chr5_2:64549259-64549278 | None:intergenic | 35.0% | |
! | AATGCATTTGAAGCAGACTT+TGG | - | chr5_2:64549461-64549480 | Msa0781890:intron | 35.0% |
!! | GACTTTGGAGCATTTGATAT+TGG | - | chr5_2:64549476-64549495 | Msa0781890:intron | 35.0% |
TTCTTAACTTCAAGGACAAC+TGG | - | chr5_2:64549557-64549576 | Msa0781890:intron | 35.0% | |
TCTTAACTTCAAGGACAACT+GGG | - | chr5_2:64549558-64549577 | Msa0781890:intron | 35.0% | |
AATCATCATGGAGAAGTAAG+TGG | - | chr5_2:64549626-64549645 | Msa0781890:three_prime_UTR | 35.0% | |
!!! | TTTTTTTTAAGTCGCGGTTG+AGG | + | chr5_2:64549977-64549996 | None:intergenic | 35.0% |
!!! | ATTTTCAGGTTAAAGGAGTG+GGG | - | chr5_2:64550772-64550791 | Msa0781890:intron | 35.0% |
TTAGTGATCTTCTCAGTTCA+TGG | - | chr5_2:64550925-64550944 | Msa0781890:intron | 35.0% | |
TCACAGTTCAATAGAGATCA+TGG | + | chr5_2:64551070-64551089 | None:intergenic | 35.0% | |
TGAACTGTGATCCTTAACAT+TGG | - | chr5_2:64551080-64551099 | Msa0781890:intron | 35.0% | |
CTTCATTCTCTCCAATGTTA+AGG | + | chr5_2:64551094-64551113 | None:intergenic | 35.0% | |
! | CACTTGTTGCCAAAAATAAC+AGG | - | chr5_2:64551272-64551291 | Msa0781890:CDS | 35.0% |
TTACATATTGGACCAAGTCA+AGG | - | chr5_2:64551299-64551318 | Msa0781890:CDS | 35.0% | |
TCATAGTTGCATGTAGAAAG+AGG | + | chr5_2:64551416-64551435 | None:intergenic | 35.0% | |
CTTAACTTTGACAGGTAACA+AGG | - | chr5_2:64551462-64551481 | Msa0781890:CDS | 35.0% | |
GAGTGTTTGGTATCATTGAT+TGG | + | chr5_2:64551533-64551552 | None:intergenic | 35.0% | |
TTACACAGATGGAAATTTGG+TGG | - | chr5_2:64551905-64551924 | Msa0781890:intron | 35.0% | |
TAGAAAACTTGGGATAACTC+AGG | - | chr5_2:64551941-64551960 | Msa0781890:intron | 35.0% | |
GCAGCCACAAAAATATTGAA+AGG | + | chr5_2:64552000-64552019 | None:intergenic | 35.0% | |
ATGAAGACTCAGATGTTAAG+TGG | - | chr5_2:64552107-64552126 | Msa0781890:CDS | 35.0% | |
TGACGTGAGAAGTGATATTT+AGG | + | chr5_2:64552145-64552164 | None:intergenic | 35.0% | |
AGCAATTTCTTGGTATGTAC+TGG | + | chr5_2:64552215-64552234 | None:intergenic | 35.0% | |
AGTACATACCAAGAAATTGC+TGG | - | chr5_2:64552214-64552233 | Msa0781890:intron | 35.0% | |
!! | CTTTGGTCTTTTTCTGTGTA+AGG | + | chr5_2:64552488-64552507 | None:intergenic | 35.0% |
AAAAGTTTAATGTGCAAGGG+TGG | + | chr5_2:64552593-64552612 | None:intergenic | 35.0% | |
AAGACTCATTTGAGGAGATA+AGG | - | chr5_2:64552620-64552639 | Msa0781890:intron | 35.0% | |
CTAACTCAACTCTACAAAAC+CGG | + | chr5_2:64552864-64552883 | None:intergenic | 35.0% | |
GAAACCAATAATCTTCTCGA+TGG | - | chr5_2:64553045-64553064 | Msa0781890:intron | 35.0% | |
GATGTTGTGAAGAACTTAAG+TGG | - | chr5_2:64553076-64553095 | Msa0781890:intron | 35.0% | |
!! | ACTTAAGTGGGTTAGTTGAA+TGG | - | chr5_2:64553089-64553108 | Msa0781890:intron | 35.0% |
AACTAAAGGGACAATTCAGA+TGG | - | chr5_2:64553245-64553264 | Msa0781890:intron | 35.0% | |
CCTTGATTAGTAGCAAAAGT+TGG | + | chr5_2:64553406-64553425 | None:intergenic | 35.0% | |
! | CCAACTTTTGCTACTAATCA+AGG | - | chr5_2:64553403-64553422 | Msa0781890:intron | 35.0% |
! | ACTTTTGCTACTAATCAAGG+AGG | - | chr5_2:64553406-64553425 | Msa0781890:intron | 35.0% |
!! | CCATCAACAATTATTTCTGC+TGG | + | chr5_2:64553433-64553452 | None:intergenic | 35.0% |
CCAGCAGAAATAATTGTTGA+TGG | - | chr5_2:64553430-64553449 | Msa0781890:intron | 35.0% | |
!! | ATAATTGTTGATGGTGTCTC+AGG | - | chr5_2:64553439-64553458 | Msa0781890:intron | 35.0% |
GAAATCACGTTCCAATATGA+TGG | + | chr5_2:64553541-64553560 | None:intergenic | 35.0% | |
ATATTGGAACGTGATTTCTG+CGG | - | chr5_2:64553543-64553562 | Msa0781890:intron | 35.0% | |
GAAGATCTATGCAAACAAGT+TGG | - | chr5_2:64553757-64553776 | Msa0781890:intron | 35.0% | |
TTGTGATACGTTAATGTCAC+AGG | - | chr5_2:64553976-64553995 | Msa0781890:intron | 35.0% | |
! | GTTTCGGTATAAAGTGTCAT+AGG | - | chr5_2:64554151-64554170 | Msa0781890:CDS | 35.0% |
!!! | GACACTCATTTTGAAATGGA+GGG | + | chr5_2:64554468-64554487 | None:intergenic | 35.0% |
!! | AAGCGACACTCATTTTGAAA+TGG | + | chr5_2:64554472-64554491 | None:intergenic | 35.0% |
! | TGTGCAGAGTATTAATTGGA+GGG | + | chr5_2:64554571-64554590 | None:intergenic | 35.0% |
! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr5_2:64554575-64554594 | None:intergenic | 35.0% |
GTTCACAATCCACATTGAAA+AGG | - | chr5_2:64554873-64554892 | Msa0781890:intron | 35.0% | |
TTCCTTAAACAATGCCCTTA+GGG | + | chr5_2:64554927-64554946 | None:intergenic | 35.0% | |
TTGTTTAAGGAACCCACAAA+AGG | - | chr5_2:64554935-64554954 | Msa0781890:intron | 35.0% | |
ATGCTTAAACAATGCCCTTA+GGG | - | chr5_2:64555040-64555059 | Msa0781890:intron | 35.0% | |
AAAAACACTTGCTTCCTTTC+AGG | - | chr5_2:64555142-64555161 | Msa0781890:CDS | 35.0% | |
!! | CTTCCTTTCAGGTTATTACT+TGG | - | chr5_2:64555153-64555172 | Msa0781890:CDS | 35.0% |
GGTTATTACTTGGAGCTTAA+TGG | - | chr5_2:64555163-64555182 | Msa0781890:CDS | 35.0% | |
TCATGCTGAATATTGATCCT+CGG | - | chr5_2:64555226-64555245 | Msa0781890:CDS | 35.0% | |
! | TACTCAATGTGTTGGACTAG+TGG | + | chr5_2:64548740-64548759 | None:intergenic | 40.0% |
ATTGCAAAGGCTACATATGG+TGG | + | chr5_2:64548865-64548884 | None:intergenic | 40.0% | |
! | TGGATTAGGCCTAATTGCAA+AGG | + | chr5_2:64548878-64548897 | None:intergenic | 40.0% |
TTTGCAATTAGGCCTAATCC+AGG | - | chr5_2:64548877-64548896 | Msa0781890:intron | 40.0% | |
! | GAATTTGAGGTAATCTGTGG+GGG | + | chr5_2:64548956-64548975 | None:intergenic | 40.0% |
ACACCCTTTCCTTGAATTTG+AGG | + | chr5_2:64548969-64548988 | None:intergenic | 40.0% | |
! | TAACTGGTCTCTTAAGCATG+TGG | - | chr5_2:64549155-64549174 | Msa0781890:intron | 40.0% |
CAAAGATCTATGCAAGGAGA+TGG | + | chr5_2:64549234-64549253 | None:intergenic | 40.0% | |
GAGGTACAAAGATCTATGCA+AGG | + | chr5_2:64549240-64549259 | None:intergenic | 40.0% | |
TGTTTGTACCATACCACATG+AGG | - | chr5_2:64549330-64549349 | Msa0781890:intron | 40.0% | |
TTCAAGGACAACTGGGAAAT+TGG | - | chr5_2:64549565-64549584 | Msa0781890:intron | 40.0% | |
GATAAATGACACGTTGAGCT+CGG | - | chr5_2:64549754-64549773 | Msa0781890:intron | 40.0% | |
!!! | TGTCTTTTGGAATTGCTGAG+AGG | + | chr5_2:64549820-64549839 | None:intergenic | 40.0% |
! | TCTACTTGTTAGTTGTGACC+AGG | - | chr5_2:64550046-64550065 | Msa0781890:intron | 40.0% |
! | CTACTTGTTAGTTGTGACCA+GGG | - | chr5_2:64550047-64550066 | Msa0781890:intron | 40.0% |
! | TACTTGTTAGTTGTGACCAG+GGG | - | chr5_2:64550048-64550067 | Msa0781890:intron | 40.0% |
!!! | TTTTCAGGTTAAAGGAGTGG+GGG | - | chr5_2:64550773-64550792 | Msa0781890:intron | 40.0% |
! | ATTTCTAGGTTCACTGGATC+CGG | + | chr5_2:64550874-64550893 | None:intergenic | 40.0% |
GGAGAGAATGAAGTGTAATG+CGG | - | chr5_2:64551101-64551120 | Msa0781890:intron | 40.0% | |
AGACTCACCACAAGAATTTG+AGG | + | chr5_2:64551378-64551397 | None:intergenic | 40.0% | |
AAATTCTTGTGGTGAGTCTC+AGG | - | chr5_2:64551379-64551398 | Msa0781890:intron | 40.0% | |
! | CATTGATTGGTTCAAACTCC+TGG | + | chr5_2:64551520-64551539 | None:intergenic | 40.0% |
!! | ACGTAGAATGTGAGAGTGTT+TGG | + | chr5_2:64551546-64551565 | None:intergenic | 40.0% |
! | GTGCCTTTTCATACAGAGAA+AGG | - | chr5_2:64551566-64551585 | Msa0781890:CDS | 40.0% |
AGGCATGTATACATGCTTCA+CGG | - | chr5_2:64551648-64551667 | Msa0781890:intron | 40.0% | |
! | GGACGCAACAACCAAAATTT+TGG | - | chr5_2:64551845-64551864 | Msa0781890:intron | 40.0% |
TCACTTCTCACGTCAATTCA+TGG | - | chr5_2:64552150-64552169 | Msa0781890:CDS | 40.0% | |
CATACCAAGAAATTGCTGGA+AGG | - | chr5_2:64552218-64552237 | Msa0781890:intron | 40.0% | |
CAAACCTTCCAGCAATTTCT+TGG | + | chr5_2:64552225-64552244 | None:intergenic | 40.0% | |
! | TTTTGCAGCAAAGATAGACC+TGG | - | chr5_2:64552341-64552360 | Msa0781890:CDS | 40.0% |
ATGCTGCATTTACTCTTCCA+GGG | - | chr5_2:64552378-64552397 | Msa0781890:intron | 40.0% | |
GGTGCAGCTATATTGAACTT+GGG | + | chr5_2:64552440-64552459 | None:intergenic | 40.0% | |
AGGTGCAGCTATATTGAACT+TGG | + | chr5_2:64552441-64552460 | None:intergenic | 40.0% | |
AAGTTCAATATAGCTGCACC+TGG | - | chr5_2:64552440-64552459 | Msa0781890:intron | 40.0% | |
!! | GGTGAAATTGAGAGTGTCTT+TGG | + | chr5_2:64552505-64552524 | None:intergenic | 40.0% |
AGAGGAGATCTTCAATAGCA+GGG | + | chr5_2:64552526-64552545 | None:intergenic | 40.0% | |
AAGAGGAGATCTTCAATAGC+AGG | + | chr5_2:64552527-64552546 | None:intergenic | 40.0% | |
TCATTTGAGGAGATAAGGTC+AGG | - | chr5_2:64552625-64552644 | Msa0781890:intron | 40.0% | |
TTACGACAAAAACTGGTACG+GGG | + | chr5_2:64552679-64552698 | None:intergenic | 40.0% | |
CTTACGACAAAAACTGGTAC+GGG | + | chr5_2:64552680-64552699 | None:intergenic | 40.0% | |
CCTTACGACAAAAACTGGTA+CGG | + | chr5_2:64552681-64552700 | None:intergenic | 40.0% | |
! | CGTACCAGTTTTTGTCGTAA+GGG | - | chr5_2:64552679-64552698 | Msa0781890:CDS | 40.0% |
TCAACCCTTACGACAAAAAC+TGG | + | chr5_2:64552686-64552705 | None:intergenic | 40.0% | |
TTTGTCGTAAGGGTTGAGTT+AGG | - | chr5_2:64552689-64552708 | Msa0781890:CDS | 40.0% | |
GAGTCTACTTAAGATCCACT+CGG | - | chr5_2:64552739-64552758 | Msa0781890:CDS | 40.0% | |
AGTCTACTTAAGATCCACTC+GGG | - | chr5_2:64552740-64552759 | Msa0781890:CDS | 40.0% | |
AGATGTCTAGTCTATGTGTG+AGG | - | chr5_2:64552781-64552800 | Msa0781890:CDS | 40.0% | |
GATGTCTAGTCTATGTGTGA+GGG | - | chr5_2:64552782-64552801 | Msa0781890:CDS | 40.0% | |
! | CCACTTACAAACGCATTTTC+AGG | + | chr5_2:64552837-64552856 | None:intergenic | 40.0% |
CCTGAAAATGCGTTTGTAAG+TGG | - | chr5_2:64552834-64552853 | Msa0781890:intron | 40.0% | |
GAAAATGCGTTTGTAAGTGG+CGG | - | chr5_2:64552837-64552856 | Msa0781890:intron | 40.0% | |
!! | CGGTTTTGTAGAGTTGAGTT+AGG | - | chr5_2:64552862-64552881 | Msa0781890:intron | 40.0% |
CTTGCCATCGAGAAGATTAT+TGG | + | chr5_2:64553052-64553071 | None:intergenic | 40.0% | |
CAATAATCTTCTCGATGGCA+AGG | - | chr5_2:64553050-64553069 | Msa0781890:intron | 40.0% | |
!! | AGTGGGTTAGTTGAATGGTA+TGG | - | chr5_2:64553094-64553113 | Msa0781890:intron | 40.0% |
TTGGTGAACCTTGTCATAGT+TGG | - | chr5_2:64553139-64553158 | Msa0781890:intron | 40.0% | |
CCAAATGCTTCATACAAAGC+AGG | + | chr5_2:64553349-64553368 | None:intergenic | 40.0% | |
! | CCTGCTTTGTATGAAGCATT+TGG | - | chr5_2:64553346-64553365 | Msa0781890:intron | 40.0% |
GTCATTGAAGCAATGAACTG+TGG | - | chr5_2:64553376-64553395 | Msa0781890:intron | 40.0% | |
TTCCACATTGATCCTCTCAA+TGG | - | chr5_2:64553463-64553482 | Msa0781890:intron | 40.0% | |
CTTGATTCATCTCCATTGAG+AGG | + | chr5_2:64553478-64553497 | None:intergenic | 40.0% | |
GCAAAGTAGACCCATCATAT+TGG | - | chr5_2:64553527-64553546 | Msa0781890:intron | 40.0% | |
TTCATTTATGCGCTGCAATC+CGG | + | chr5_2:64553569-64553588 | None:intergenic | 40.0% | |
GATTGCAGCGCATAAATGAA+TGG | - | chr5_2:64553569-64553588 | Msa0781890:intron | 40.0% | |
ACAAGGAAACATCTCAAGAG+GGG | + | chr5_2:64553607-64553626 | None:intergenic | 40.0% | |
GACAAGGAAACATCTCAAGA+GGG | + | chr5_2:64553608-64553627 | None:intergenic | 40.0% | |
! | GGGTCTTGTAAAAATGGACA+AGG | + | chr5_2:64553624-64553643 | None:intergenic | 40.0% |
! | TGCTGATGGTGCACATAAAA+GGG | + | chr5_2:64553687-64553706 | None:intergenic | 40.0% |
! | TTGCTGATGGTGCACATAAA+AGG | + | chr5_2:64553688-64553707 | None:intergenic | 40.0% |
CAACCAACTCTCAAACAACA+AGG | - | chr5_2:64554049-64554068 | Msa0781890:CDS | 40.0% | |
TCCATACACAGACTTGACAA+TGG | - | chr5_2:64554335-64554354 | Msa0781890:intron | 40.0% | |
!!! | CGACACTCATTTTGAAATGG+AGG | + | chr5_2:64554469-64554488 | None:intergenic | 40.0% |
! | GTGTGCAGAGTATTAATTGG+AGG | + | chr5_2:64554572-64554591 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr5_2:64554710-64554729 | Msa0781890:CDS | 40.0% |
!! | AACGGAGGGAGTATTTAAGT+TGG | - | chr5_2:64554724-64554743 | Msa0781890:CDS | 40.0% |
TGCTGCAAACCAAGAAGAAA+AGG | + | chr5_2:64554847-64554866 | None:intergenic | 40.0% | |
GTTCCTTAAACAATGCCCTT+AGG | + | chr5_2:64554928-64554947 | None:intergenic | 40.0% | |
GATGCTTAAACAATGCCCTT+AGG | - | chr5_2:64555039-64555058 | Msa0781890:intron | 40.0% | |
AATGCTAACAAGTGCCCTAA+GGG | + | chr5_2:64555057-64555076 | None:intergenic | 40.0% | |
AAATGCTAACAAGTGCCCTA+AGG | + | chr5_2:64555058-64555077 | None:intergenic | 40.0% | |
GCTCCAAGTAATAACCTGAA+AGG | + | chr5_2:64555159-64555178 | None:intergenic | 40.0% | |
! | AGAAGGTGTATATACATCCG+AGG | + | chr5_2:64555246-64555265 | None:intergenic | 40.0% |
CTACTCTGCTTCAATGCATC+AGG | + | chr5_2:64548432-64548451 | None:intergenic | 45.0% | |
AGTACCTAGAGAAAGGGAGA+AGG | - | chr5_2:64548478-64548497 | Msa0781890:three_prime_UTR | 45.0% | |
TGATCCTTCTCCCTTTCTCT+AGG | + | chr5_2:64548485-64548504 | None:intergenic | 45.0% | |
!! | AATGTGTTGGACTAGTGGTG+GGG | + | chr5_2:64548735-64548754 | None:intergenic | 45.0% |
!! | CAATGTGTTGGACTAGTGGT+GGG | + | chr5_2:64548736-64548755 | None:intergenic | 45.0% |
!! | TCAATGTGTTGGACTAGTGG+TGG | + | chr5_2:64548737-64548756 | None:intergenic | 45.0% |
TGTGGTGCATATGAACTTGC+AGG | - | chr5_2:64548825-64548844 | Msa0781890:intron | 45.0% | |
GTATGTACGTGTCAACTCAG+AGG | - | chr5_2:64548909-64548928 | Msa0781890:intron | 45.0% | |
TCACTGATCCTCATGTGGTA+TGG | + | chr5_2:64549341-64549360 | None:intergenic | 45.0% | |
TACCACATGAGGATCAGTGA+TGG | - | chr5_2:64549341-64549360 | Msa0781890:intron | 45.0% | |
TACCATCACTGATCCTCATG+TGG | + | chr5_2:64549346-64549365 | None:intergenic | 45.0% | |
! | GGCAAAAGCACAGACTATAG+TGG | - | chr5_2:64549586-64549605 | Msa0781890:intron | 45.0% |
TCATGAGACTCTGCAAGTGT+AGG | + | chr5_2:64549736-64549755 | None:intergenic | 45.0% | |
CGATTTAGGTCGCAACATCA+AGG | + | chr5_2:64550001-64550020 | None:intergenic | 45.0% | |
!!! | TTTTTTGCAAGCTTCACCGC+TGG | - | chr5_2:64550727-64550746 | Msa0781890:intron | 45.0% |
AAAGGATGGGGAGATAATGC+AGG | - | chr5_2:64550802-64550821 | Msa0781890:intron | 45.0% | |
ATGGGGAGATAATGCAGGAA+GGG | - | chr5_2:64550807-64550826 | Msa0781890:intron | 45.0% | |
AGATAATGCAGGAAGGGTGA+AGG | - | chr5_2:64550813-64550832 | Msa0781890:intron | 45.0% | |
!! | ATCAGAAGTACTCCAAGCTC+CGG | - | chr5_2:64550852-64550871 | Msa0781890:intron | 45.0% |
TTTGGGCAAGCAGATGTTCT+TGG | - | chr5_2:64550952-64550971 | Msa0781890:intron | 45.0% | |
CATCAGAAAGCAAGATGTCG+CGG | - | chr5_2:64551145-64551164 | Msa0781890:CDS | 45.0% | |
ATTGGACCAAGTCAAGGCTT+TGG | - | chr5_2:64551305-64551324 | Msa0781890:intron | 45.0% | |
CTTCTTCCAAAGCCTTGACT+TGG | + | chr5_2:64551314-64551333 | None:intergenic | 45.0% | |
!! | AGGTTGATACCTGATGCTAG+AGG | - | chr5_2:64551482-64551501 | Msa0781890:CDS | 45.0% |
CACTTAGTTCCTCTAGCATC+AGG | + | chr5_2:64551494-64551513 | None:intergenic | 45.0% | |
! | TGATTGGTTCAAACTCCTGG+TGG | + | chr5_2:64551517-64551536 | None:intergenic | 45.0% |
AGAAAGGAATCTTGCGCCAA+TGG | - | chr5_2:64551582-64551601 | Msa0781890:intron | 45.0% | |
GAAAGGAATCTTGCGCCAAT+GGG | - | chr5_2:64551583-64551602 | Msa0781890:intron | 45.0% | |
! | GGGAAGCCAGATCTTGTTAT+TGG | - | chr5_2:64551879-64551898 | Msa0781890:intron | 45.0% |
CTGGAAGAGTAAATGCAGCA+TGG | + | chr5_2:64552379-64552398 | None:intergenic | 45.0% | |
CATGCTGCATTTACTCTTCC+AGG | - | chr5_2:64552377-64552396 | Msa0781890:intron | 45.0% | |
TTACTCTTCCAGGGCTATGT+AGG | - | chr5_2:64552387-64552406 | Msa0781890:intron | 45.0% | |
TACTCTTCCAGGGCTATGTA+GGG | - | chr5_2:64552388-64552407 | Msa0781890:intron | 45.0% | |
! | GGCTATGTAGGGTTGTTTCA+GGG | - | chr5_2:64552399-64552418 | Msa0781890:intron | 45.0% |
TAGATACTTTGATCGGCACC+AGG | + | chr5_2:64552461-64552480 | None:intergenic | 45.0% | |
! | CCGTACCAGTTTTTGTCGTA+AGG | - | chr5_2:64552678-64552697 | Msa0781890:CDS | 45.0% |
AGTCCCGCATTGAATCAGAT+AGG | - | chr5_2:64552811-64552830 | Msa0781890:CDS | 45.0% | |
AGGCCTATCTGATTCAATGC+GGG | + | chr5_2:64552817-64552836 | None:intergenic | 45.0% | |
CAGGCCTATCTGATTCAATG+CGG | + | chr5_2:64552818-64552837 | None:intergenic | 45.0% | |
GTGGATATCTAGCAGAGAAG+AGG | - | chr5_2:64553023-64553042 | Msa0781890:intron | 45.0% | |
GTGAACCTTGTCATAGTTGG+TGG | - | chr5_2:64553142-64553161 | Msa0781890:intron | 45.0% | |
AGAAGCCACCAACTATGACA+AGG | + | chr5_2:64553150-64553169 | None:intergenic | 45.0% | |
CAGACTGATCGATATCGCAA+CGG | - | chr5_2:64553277-64553296 | Msa0781890:intron | 45.0% | |
!! | TCGATGCATTGCTGACTCAA+AGG | - | chr5_2:64553309-64553328 | Msa0781890:intron | 45.0% |
!! | CGATGCATTGCTGACTCAAA+GGG | - | chr5_2:64553310-64553329 | Msa0781890:intron | 45.0% |
CTCCATTGAGAGGATCAATG+TGG | + | chr5_2:64553468-64553487 | None:intergenic | 45.0% | |
AACATCTCAAGAGGGGACAT+AGG | + | chr5_2:64553600-64553619 | None:intergenic | 45.0% | |
GGACAAGGAAACATCTCAAG+AGG | + | chr5_2:64553609-64553628 | None:intergenic | 45.0% | |
! | TGGGGAACACTTACACCTTT+TGG | - | chr5_2:64553786-64553805 | Msa0781890:intron | 45.0% |
GGAGGTTCATCACTTGGAAT+AGG | + | chr5_2:64554013-64554032 | None:intergenic | 45.0% | |
!!! | GGTTTTGGAGGTTCATCACT+TGG | + | chr5_2:64554019-64554038 | None:intergenic | 45.0% |
GATGAACCTCCAAAACCAGT+TGG | - | chr5_2:64554022-64554041 | Msa0781890:intron | 45.0% | |
!! | GAGCCTTGTTGTTTGAGAGT+TGG | + | chr5_2:64554055-64554074 | None:intergenic | 45.0% |
CTCTCAAACAACAAGGCTCT+AGG | - | chr5_2:64554056-64554075 | Msa0781890:CDS | 45.0% | |
GCCATTGTCAAGTCTGTGTA+TGG | + | chr5_2:64554339-64554358 | None:intergenic | 45.0% | |
AGTCAGTGTCAAACACTGAC+AGG | - | chr5_2:64554421-64554440 | Msa0781890:intron | 45.0% | |
TGTCAAACACTGACAGGTGT+TGG | - | chr5_2:64554427-64554446 | Msa0781890:intron | 45.0% | |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr5_2:64554709-64554728 | Msa0781890:CDS | 45.0% |
! | CAATGTGGATTGTGAACGTC+TGG | + | chr5_2:64554870-64554889 | None:intergenic | 45.0% |
TCTTGCTAACAAGTGCCCTA+AGG | - | chr5_2:64554909-64554928 | Msa0781890:intron | 45.0% | |
CTTGCTAACAAGTGCCCTAA+GGG | - | chr5_2:64554910-64554929 | Msa0781890:intron | 45.0% | |
!! | TGCCCTAAGGGCATTGTTTA+AGG | - | chr5_2:64554922-64554941 | Msa0781890:intron | 45.0% |
GTGCGCTTCAAGGTATGTGT+TGG | + | chr5_2:64548387-64548406 | None:intergenic | 50.0% | |
TTAGGCCTAATCCAGGAGTC+TGG | - | chr5_2:64548884-64548903 | Msa0781890:intron | 50.0% | |
TAGGCCTAATCCAGGAGTCT+GGG | - | chr5_2:64548885-64548904 | Msa0781890:intron | 50.0% | |
TACTCCCAGACTCCTGGATT+AGG | + | chr5_2:64548892-64548911 | None:intergenic | 50.0% | |
! | AAAAGACCGCTTGCTAGGAG+AGG | - | chr5_2:64549208-64549227 | Msa0781890:intron | 50.0% |
GACTACCCCTCCCATATGAA+GGG | + | chr5_2:64550079-64550098 | None:intergenic | 50.0% | |
AGACTACCCCTCCCATATGA+AGG | + | chr5_2:64550080-64550099 | None:intergenic | 50.0% | |
TCATATGGGAGGGGTAGTCT+TGG | - | chr5_2:64550080-64550099 | Msa0781890:three_prime_UTR | 50.0% | |
AAGGAGTGGGGGTTTGAGAA+AGG | - | chr5_2:64550784-64550803 | Msa0781890:intron | 50.0% | |
AGTGGGGGTTTGAGAAAGGA+TGG | - | chr5_2:64550788-64550807 | Msa0781890:intron | 50.0% | |
GTGGGGGTTTGAGAAAGGAT+GGG | - | chr5_2:64550789-64550808 | Msa0781890:intron | 50.0% | |
TGGGGGTTTGAGAAAGGATG+GGG | - | chr5_2:64550790-64550809 | Msa0781890:intron | 50.0% | |
GATGGGGAGATAATGCAGGA+AGG | - | chr5_2:64550806-64550825 | Msa0781890:intron | 50.0% | |
TGTCTCTGCGACTGCAACTA+AGG | + | chr5_2:64551127-64551146 | None:intergenic | 50.0% | |
TAGAGGAACTAAGTGCCACC+AGG | - | chr5_2:64551499-64551518 | Msa0781890:CDS | 50.0% | |
TGTCGAAGCGAGAAACCCAT+TGG | + | chr5_2:64551601-64551620 | None:intergenic | 50.0% | |
! | GATCTGGCTTCCCTTCCATT+AGG | + | chr5_2:64551872-64551891 | None:intergenic | 50.0% |
GCATGGCTTTCATACTGTCC+AGG | + | chr5_2:64552362-64552381 | None:intergenic | 50.0% | |
GAAACAACCCTACATAGCCC+TGG | + | chr5_2:64552398-64552417 | None:intergenic | 50.0% | |
! | GGGCTATGTAGGGTTGTTTC+AGG | - | chr5_2:64552398-64552417 | Msa0781890:intron | 50.0% |
!!! | TGCTTGCCAACTGGTTTTGG+AGG | + | chr5_2:64554031-64554050 | None:intergenic | 50.0% |
!! | GGTTGCTTGCCAACTGGTTT+TGG | + | chr5_2:64554034-64554053 | None:intergenic | 50.0% |
! | AGAGTTGGTTGCTTGCCAAC+TGG | + | chr5_2:64554040-64554059 | None:intergenic | 50.0% |
! | GACTAGTGGTGGGGATCAAG+GGG | + | chr5_2:64548726-64548745 | None:intergenic | 55.0% |
! | GGACTAGTGGTGGGGATCAA+GGG | + | chr5_2:64548727-64548746 | None:intergenic | 55.0% |
!! | TGGACTAGTGGTGGGGATCA+AGG | + | chr5_2:64548728-64548747 | None:intergenic | 55.0% |
CGTACATACTCCCAGACTCC+TGG | + | chr5_2:64548898-64548917 | None:intergenic | 55.0% | |
CTCAGAGGACCTCTCTGTTG+AGG | - | chr5_2:64548924-64548943 | Msa0781890:intron | 55.0% | |
GGGTGATAGCCTCAACAGAG+AGG | + | chr5_2:64548936-64548955 | None:intergenic | 55.0% | |
AGATGGCCTCTCCTAGCAAG+CGG | + | chr5_2:64549217-64549236 | None:intergenic | 55.0% | |
CTCGGCTGCAAAGCTTCAGA+TGG | - | chr5_2:64549772-64549791 | Msa0781890:intron | 55.0% | |
AAGGCCTGCGAGCACGATTT+AGG | + | chr5_2:64550015-64550034 | None:intergenic | 55.0% | |
! | AGGGGCGTAGCCCTTCATAT+GGG | - | chr5_2:64550066-64550085 | Msa0781890:intron | 55.0% |
GCGTAGCCCTTCATATGGGA+GGG | - | chr5_2:64550070-64550089 | Msa0781890:intron | 55.0% | |
CGTAGCCCTTCATATGGGAG+GGG | - | chr5_2:64550071-64550090 | Msa0781890:intron | 55.0% | |
GGCATTAGGGTCACAACCAG+CGG | + | chr5_2:64550746-64550765 | None:intergenic | 55.0% | |
!! | GTTCTTGGCTTGCCAGACAC+TGG | - | chr5_2:64550967-64550986 | Msa0781890:intron | 55.0% |
TTTACCTGGCCACCAGTGTC+TGG | + | chr5_2:64550982-64551001 | None:intergenic | 55.0% | |
TAAGATCCACTCGGGCCACT+CGG | - | chr5_2:64552748-64552767 | Msa0781890:CDS | 55.0% | |
CATCTGTAGCATGACCCGAG+TGG | + | chr5_2:64552766-64552785 | None:intergenic | 55.0% | |
!! | TGCGTTTGTAAGTGGCGGAC+CGG | - | chr5_2:64552842-64552861 | Msa0781890:intron | 55.0% |
TGGAACGTGATTTCTGCGGC+CGG | - | chr5_2:64553547-64553566 | Msa0781890:intron | 55.0% | |
GCGACCTAAATCGTGCTCGC+AGG | - | chr5_2:64550008-64550027 | Msa0781890:intron | 60.0% | |
CATATGAAGGGCTACGCCCC+TGG | + | chr5_2:64550067-64550086 | None:intergenic | 60.0% | |
! | CAGGGGCGTAGCCCTTCATA+TGG | - | chr5_2:64550065-64550084 | Msa0781890:intron | 60.0% |
GGCGTAGCCCTTCATATGGG+AGG | - | chr5_2:64550069-64550088 | Msa0781890:intron | 60.0% | |
GGTTCACTGGATCCGGAGCT+TGG | + | chr5_2:64550867-64550886 | None:intergenic | 60.0% | |
!! | CTTGGCTTGCCAGACACTGG+TGG | - | chr5_2:64550970-64550989 | Msa0781890:intron | 60.0% |
AAGATCCACTCGGGCCACTC+GGG | - | chr5_2:64552749-64552768 | Msa0781890:CDS | 60.0% | |
CTTGCCAGACACTGGTGGCC+AGG | - | chr5_2:64550975-64550994 | Msa0781890:intron | 65.0% | |
CATGACCCGAGTGGCCCGAG+TGG | + | chr5_2:64552757-64552776 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 64548299 | 64555369 | 64548299 | ID=Msa0781890;Name=Msa0781890 |
chr5_2 | mRNA | 64548299 | 64555369 | 64548299 | ID=Msa0781890-mRNA-1;Parent=Msa0781890;Name=Msa0781890-mRNA-1;_AED=0.10;_eAED=0.10;_QI=79|0.71|0.73|1|0.71|0.66|15|968|540 |
chr5_2 | exon | 64548299 | 64548504 | 64548299 | ID=Msa0781890-mRNA-1:exon:19354;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64548774 | 64548803 | 64548774 | ID=Msa0781890-mRNA-1:exon:19353;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64549591 | 64549670 | 64549591 | ID=Msa0781890-mRNA-1:exon:19352;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64549782 | 64549920 | 64549782 | ID=Msa0781890-mRNA-1:exon:19351;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64550078 | 64550644 | 64550078 | ID=Msa0781890-mRNA-1:exon:19350;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64551115 | 64551319 | 64551115 | ID=Msa0781890-mRNA-1:exon:19349;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64551429 | 64551595 | 64551429 | ID=Msa0781890-mRNA-1:exon:19348;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64551706 | 64551822 | 64551706 | ID=Msa0781890-mRNA-1:exon:19347;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64552064 | 64552192 | 64552064 | ID=Msa0781890-mRNA-1:exon:19346;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64552279 | 64552374 | 64552279 | ID=Msa0781890-mRNA-1:exon:19345;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64552672 | 64552840 | 64552672 | ID=Msa0781890-mRNA-1:exon:19344;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64553804 | 64553922 | 64553804 | ID=Msa0781890-mRNA-1:exon:19343;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64554028 | 64554220 | 64554028 | ID=Msa0781890-mRNA-1:exon:19342;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64554682 | 64554821 | 64554682 | ID=Msa0781890-mRNA-1:exon:19341;Parent=Msa0781890-mRNA-1 |
chr5_2 | exon | 64555057 | 64555369 | 64555057 | ID=Msa0781890-mRNA-1:exon:19340;Parent=Msa0781890-mRNA-1 |
chr5_2 | five_prime_UTR | 64555291 | 64555369 | 64555291 | ID=Msa0781890-mRNA-1:five_prime_utr;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64555057 | 64555290 | 64555057 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64554682 | 64554821 | 64554682 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64554028 | 64554220 | 64554028 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64553804 | 64553922 | 64553804 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64552672 | 64552840 | 64552672 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64552279 | 64552374 | 64552279 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64552064 | 64552192 | 64552064 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64551706 | 64551822 | 64551706 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64551429 | 64551595 | 64551429 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64551115 | 64551319 | 64551115 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | CDS | 64550591 | 64550644 | 64550591 | ID=Msa0781890-mRNA-1:cds;Parent=Msa0781890-mRNA-1 |
chr5_2 | three_prime_UTR | 64550078 | 64550590 | 64550078 | ID=Msa0781890-mRNA-1:three_prime_utr;Parent=Msa0781890-mRNA-1 |
chr5_2 | three_prime_UTR | 64549782 | 64549920 | 64549782 | ID=Msa0781890-mRNA-1:three_prime_utr;Parent=Msa0781890-mRNA-1 |
chr5_2 | three_prime_UTR | 64549591 | 64549670 | 64549591 | ID=Msa0781890-mRNA-1:three_prime_utr;Parent=Msa0781890-mRNA-1 |
chr5_2 | three_prime_UTR | 64548774 | 64548803 | 64548774 | ID=Msa0781890-mRNA-1:three_prime_utr;Parent=Msa0781890-mRNA-1 |
chr5_2 | three_prime_UTR | 64548299 | 64548504 | 64548299 | ID=Msa0781890-mRNA-1:three_prime_utr;Parent=Msa0781890-mRNA-1 |
Gene Sequence |
Protein sequence |