AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0783290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0783290 MtrunA17_Chr5g0438511 68.182 176 35 3 1 155 1 176 5.19e-43 140
Msa0783290 MtrunA17_Chr5g0438501 90.000 50 1 1 1 46 1 50 2.11e-22 87.4
Msa0783290 MtrunA17_Chr5g0438491 80.000 50 7 1 1 47 1 50 1.30e-13 64.7
Msa0783290 MtrunA17_Chr5g0438471 81.633 49 6 1 1 46 1 49 7.11e-12 61.2
Msa0783290 MtrunA17_Chr5g0438481 77.551 49 8 1 1 46 1 49 9.27e-12 60.5
Msa0783290 MtrunA17_Chr5g0438441 49.351 77 34 3 1 77 1 72 1.45e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 65 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGTTTAAATGTGATATT+TGG 0.199569 5_2:+67205550 None:intergenic
AACTTCCTCTGATGCCAAAA+AGG 0.230354 5_2:-67205442 Msa0783290:CDS
GTAATGTCCACCACCATATT+TGG 0.291238 5_2:+67204700 None:intergenic
ATTGTGGTAACCGCCATATT+TGG 0.317393 5_2:+67204877 None:intergenic
GAAGTAAACGATGCCAAATA+TGG 0.333960 5_2:-67204890 Msa0783290:CDS
GAAGTAAACGATGCCAAATA+TGG 0.342429 5_2:-67204713 Msa0783290:CDS
TATGGTGGTGGACATTACTA+TGG 0.403264 5_2:-67204695 Msa0783290:CDS
AATGGTGGTGGACATTACTA+TGG 0.429163 5_2:-67204857 Msa0783290:CDS
GGAGGGAAAGAGTGATATGT+AGG 0.433161 5_2:+67205619 None:intergenic
TGGTTCTTCTTGTGTCAGCT+AGG 0.433566 5_2:-67205476 Msa0783290:CDS
GAAGTGTGCTCTATATATAA+TGG 0.448305 5_2:+67205598 None:intergenic
GATATGTAGGGACCTTTACT+TGG 0.450596 5_2:+67205632 None:intergenic
AATCCTCATCCTAGGCCTCT+TGG 0.458683 5_2:-67205502 Msa0783290:CDS
GAACCATTGCCAAGAGGCCT+AGG 0.460802 5_2:+67205493 None:intergenic
GGTGGTTCTCACCATGGTGG+AGG 0.471933 5_2:-67204650 Msa0783290:CDS
GGTGGTTCTCACGGTGGAGG+TGG 0.475576 5_2:-67204833 Msa0783290:CDS
GGTTCTCACCATGGTGGAGG+TGG 0.480643 5_2:-67204647 Msa0783290:CDS
GGTGGTTCTCACCACGGTGG+AGG 0.484853 5_2:-67204671 Msa0783290:CDS
GGTGGTTCTCACCACGGTGG+AGG 0.484853 5_2:-67204815 Msa0783290:CDS
CATCCTAGGCCTCTTGGCAA+TGG 0.496291 5_2:-67205496 Msa0783290:CDS
GGAGGTGGTTCTCACGGTGG+AGG 0.512830 5_2:-67204836 Msa0783290:CDS
GGTTCTTCTTGTGTCAGCTA+GGG 0.514897 5_2:-67205475 Msa0783290:CDS
GGCGGTTACCACAATGGTGG+TGG 0.518554 5_2:-67204869 Msa0783290:CDS
GGTTCTCACCACGGTGGAGG+TGG 0.520241 5_2:-67204668 Msa0783290:CDS
GGTTCTCACCACGGTGGAGG+TGG 0.520241 5_2:-67204812 Msa0783290:CDS
TACTATGGAGGTGGTTCTCA+CGG 0.525230 5_2:-67204842 Msa0783290:CDS
ATTCAGCATGTGAGCAGCAA+TGG 0.536032 5_2:+67204603 None:intergenic
TTGCCAAGAGGCCTAGGATG+AGG 0.538496 5_2:+67205499 None:intergenic
CATGTGAGCAGCAATGGCCG+TGG 0.551382 5_2:+67204609 None:intergenic
TTAAATGTGATATTTGGTAG+TGG 0.552948 5_2:+67205556 None:intergenic
GGTGGACATTACTATGGAGG+TGG 0.556814 5_2:-67204689 Msa0783290:CDS
GGTGGACATTACTATGGAGG+TGG 0.556814 5_2:-67204851 Msa0783290:CDS
CATATGAGCAGCAATGGCCG+TGG 0.561023 5_2:+67204774 None:intergenic
CTTTCTGAACTACCAAGTAA+AGG 0.572070 5_2:-67205644 Msa0783290:five_prime_UTR
AACGATGCCAAATATGGTGG+TGG 0.577213 5_2:-67204707 Msa0783290:CDS
GTTTGTTGCCGTGCAAGCTG+AGG 0.597485 5_2:-67204747 Msa0783290:CDS
AAATATGGCGGTTACCACAA+TGG 0.601953 5_2:-67204875 Msa0783290:CDS
ACTCGGCATATGAGCAGCAA+TGG 0.602148 5_2:+67204768 None:intergenic
AGCTTGCACGGCAACAAACT+CGG 0.602417 5_2:+67204751 None:intergenic
GGTGGAGGTGGTTCTCACCA+TGG 0.610718 5_2:-67204656 Msa0783290:CDS
GAGGGAAAGAGTGATATGTA+GGG 0.612466 5_2:+67205620 None:intergenic
TTTAAACAGATATTGAACAA+TGG 0.612680 5_2:-67205538 Msa0783290:exon
GGTTGCCATCACTATTGCCA+CGG 0.613013 5_2:-67204626 Msa0783290:CDS
GGTTGCCATCACTATTGCCA+CGG 0.613013 5_2:-67204791 Msa0783290:CDS
GTGTGCTCTATATATAATGG+AGG 0.615419 5_2:+67205601 None:intergenic
AATGGCCGTGGCAATAGTGA+TGG 0.615442 5_2:+67204621 None:intergenic
AATGGCCGTGGCAATAGTGA+TGG 0.615442 5_2:+67204786 None:intergenic
GGTGGAGGTGGTTCTCACCA+CGG 0.641021 5_2:-67204821 Msa0783290:CDS
AGTAATGTCCACCACCATTG+TGG 0.641701 5_2:+67204861 None:intergenic
TATGGAGGTGGTTCTCACCA+CGG 0.648357 5_2:-67204677 Msa0783290:CDS
TGTGCTCTATATATAATGGA+GGG 0.654334 5_2:+67205602 None:intergenic
GGAGGTGGTTCTCACCATGG+TGG 0.655820 5_2:-67204653 Msa0783290:CDS
ATTTGTTGCCGTGCAAGCTG+AGG 0.673816 5_2:-67204582 Msa0783290:CDS
CAAGAAGAACCATTGCCAAG+AGG 0.674082 5_2:+67205487 None:intergenic
GATGGCAACCACCTCCACCA+TGG 0.681347 5_2:+67204639 None:intergenic
GGTGGTGGACATTACTATGG+AGG 0.685934 5_2:-67204854 Msa0783290:CDS
GTAAACGATGCCAAATATGG+CGG 0.688367 5_2:-67204887 Msa0783290:CDS
TATGGAGGTGGTTCTCACGG+TGG 0.695015 5_2:-67204839 Msa0783290:CDS
GGAGGTGGTTCTCACCACGG+TGG 0.700953 5_2:-67204818 Msa0783290:CDS
GGTGGTGGACATTACTATGG+AGG 0.702942 5_2:-67204692 Msa0783290:CDS
TATGGCGGTTACCACAATGG+TGG 0.720585 5_2:-67204872 Msa0783290:CDS
GTAAACGATGCCAAATATGG+TGG 0.739461 5_2:-67204710 Msa0783290:CDS
GGAGGTGGTTCTCACCACGG+TGG 0.747901 5_2:-67204674 Msa0783290:CDS
GGTGAGAACCACCTCCACCG+TGG 0.755651 5_2:+67204660 None:intergenic
GATGGCAACCACCTCCACCG+TGG 0.756569 5_2:+67204804 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTGTTTAAATGTGATATT+TGG + chr5_2:67204681-67204700 None:intergenic 20.0%
!! TTTAAACAGATATTGAACAA+TGG - chr5_2:67204690-67204709 Msa0783290:CDS 20.0%
!! ATCTGTTTAAATGTGATATT+TGG + chr5_2:67204681-67204700 None:intergenic 20.0%
!! TTTAAACAGATATTGAACAA+TGG - chr5_2:67204690-67204709 Msa0783290:CDS 20.0%
! TTAAATGTGATATTTGGTAG+TGG + chr5_2:67204675-67204694 None:intergenic 25.0%
!! TTGAACAATGGATTCAAAAA+AGG - chr5_2:67204702-67204721 Msa0783290:CDS 25.0%
!!! ACTGCTAGCTTTATAAAATA+AGG - chr5_2:67205181-67205200 Msa0783290:intron 25.0%
! CGTATGTATGTAAAATGTAA+TGG - chr5_2:67205275-67205294 Msa0783290:intron 25.0%
! TTCATATATATTGTTTGCAG+AGG - chr5_2:67205298-67205317 Msa0783290:intron 25.0%
! TTAAATGTGATATTTGGTAG+TGG + chr5_2:67204675-67204694 None:intergenic 25.0%
!! TTGAACAATGGATTCAAAAA+AGG - chr5_2:67204702-67204721 Msa0783290:CDS 25.0%
!!! ACTGCTAGCTTTATAAAATA+AGG - chr5_2:67205181-67205200 Msa0783290:intron 25.0%
! CGTATGTATGTAAAATGTAA+TGG - chr5_2:67205275-67205294 Msa0783290:intron 25.0%
! TTCATATATATTGTTTGCAG+AGG - chr5_2:67205298-67205317 Msa0783290:intron 25.0%
! TGTGCTCTATATATAATGGA+GGG + chr5_2:67204629-67204648 None:intergenic 30.0%
GAAGTGTGCTCTATATATAA+TGG + chr5_2:67204633-67204652 None:intergenic 30.0%
! TGTGCTCTATATATAATGGA+GGG + chr5_2:67204629-67204648 None:intergenic 30.0%
GAAGTGTGCTCTATATATAA+TGG + chr5_2:67204633-67204652 None:intergenic 30.0%
CTTTCTGAACTACCAAGTAA+AGG - chr5_2:67204584-67204603 Msa0783290:CDS 35.0%
GTGTGCTCTATATATAATGG+AGG + chr5_2:67204630-67204649 None:intergenic 35.0%
GAAGTAAACGATGCCAAATA+TGG - chr5_2:67205338-67205357 Msa0783290:intron 35.0%
GAAGTAAACGATGCCAAATA+TGG - chr5_2:67205338-67205357 Msa0783290:intron 35.0%
CTTTCTGAACTACCAAGTAA+AGG - chr5_2:67204584-67204603 Msa0783290:CDS 35.0%
GTGTGCTCTATATATAATGG+AGG + chr5_2:67204630-67204649 None:intergenic 35.0%
GAAGTAAACGATGCCAAATA+TGG - chr5_2:67205338-67205357 Msa0783290:intron 35.0%
GAAGTAAACGATGCCAAATA+TGG - chr5_2:67205338-67205357 Msa0783290:intron 35.0%
GATATGTAGGGACCTTTACT+TGG + chr5_2:67204599-67204618 None:intergenic 40.0%
GAGGGAAAGAGTGATATGTA+GGG + chr5_2:67204611-67204630 None:intergenic 40.0%
AAAAAGGCAATCCTCATCCT+AGG - chr5_2:67204718-67204737 Msa0783290:CDS 40.0%
AACTTCCTCTGATGCCAAAA+AGG - chr5_2:67204786-67204805 Msa0783290:CDS 40.0%
ACTTCCTCTGATGCCAAAAA+GGG - chr5_2:67204787-67204806 Msa0783290:CDS 40.0%
! AGAGTAGAACTCACCCTTTT+TGG + chr5_2:67204803-67204822 None:intergenic 40.0%
GTAAACGATGCCAAATATGG+CGG - chr5_2:67205341-67205360 Msa0783290:intron 40.0%
ATTGTGGTAACCGCCATATT+TGG + chr5_2:67205354-67205373 None:intergenic 40.0%
AAATATGGCGGTTACCACAA+TGG - chr5_2:67205353-67205372 Msa0783290:intron 40.0%
!! AATGGTGGTGGACATTACTA+TGG - chr5_2:67205371-67205390 Msa0783290:intron 40.0%
GTAAACGATGCCAAATATGG+TGG - chr5_2:67205341-67205360 Msa0783290:intron 40.0%
GTAATGTCCACCACCATATT+TGG + chr5_2:67205531-67205550 None:intergenic 40.0%
!! TATGGTGGTGGACATTACTA+TGG - chr5_2:67205533-67205552 Msa0783290:exon 40.0%
GATATGTAGGGACCTTTACT+TGG + chr5_2:67204599-67204618 None:intergenic 40.0%
GAGGGAAAGAGTGATATGTA+GGG + chr5_2:67204611-67204630 None:intergenic 40.0%
AAAAAGGCAATCCTCATCCT+AGG - chr5_2:67204718-67204737 Msa0783290:CDS 40.0%
AACTTCCTCTGATGCCAAAA+AGG - chr5_2:67204786-67204805 Msa0783290:CDS 40.0%
ACTTCCTCTGATGCCAAAAA+GGG - chr5_2:67204787-67204806 Msa0783290:CDS 40.0%
! AGAGTAGAACTCACCCTTTT+TGG + chr5_2:67204803-67204822 None:intergenic 40.0%
GTAAACGATGCCAAATATGG+CGG - chr5_2:67205341-67205360 Msa0783290:intron 40.0%
ATTGTGGTAACCGCCATATT+TGG + chr5_2:67205354-67205373 None:intergenic 40.0%
AAATATGGCGGTTACCACAA+TGG - chr5_2:67205353-67205372 Msa0783290:intron 40.0%
!! AATGGTGGTGGACATTACTA+TGG - chr5_2:67205371-67205390 Msa0783290:intron 40.0%
GTAAACGATGCCAAATATGG+TGG - chr5_2:67205341-67205360 Msa0783290:intron 40.0%
GTAATGTCCACCACCATATT+TGG + chr5_2:67205531-67205550 None:intergenic 40.0%
!! TATGGTGGTGGACATTACTA+TGG - chr5_2:67205533-67205552 Msa0783290:exon 40.0%
GGAGGGAAAGAGTGATATGT+AGG + chr5_2:67204612-67204631 None:intergenic 45.0%
CAAGAAGAACCATTGCCAAG+AGG + chr5_2:67204744-67204763 None:intergenic 45.0%
TGGTTCTTCTTGTGTCAGCT+AGG - chr5_2:67204752-67204771 Msa0783290:CDS 45.0%
GGTTCTTCTTGTGTCAGCTA+GGG - chr5_2:67204753-67204772 Msa0783290:CDS 45.0%
AGTAATGTCCACCACCATTG+TGG + chr5_2:67205370-67205389 None:intergenic 45.0%
TACTATGGAGGTGGTTCTCA+CGG - chr5_2:67205386-67205405 Msa0783290:intron 45.0%
! AGTCTTTTCCTCAGCTTGCA+CGG + chr5_2:67205492-67205511 None:intergenic 45.0%
AACGATGCCAAATATGGTGG+TGG - chr5_2:67205521-67205540 Msa0783290:CDS 45.0%
ATTCAGCATGTGAGCAGCAA+TGG + chr5_2:67205628-67205647 None:intergenic 45.0%
!! AGTTTTGTCCTCAGCTTGCA+CGG + chr5_2:67205657-67205676 None:intergenic 45.0%
GGAGGGAAAGAGTGATATGT+AGG + chr5_2:67204612-67204631 None:intergenic 45.0%
CAAGAAGAACCATTGCCAAG+AGG + chr5_2:67204744-67204763 None:intergenic 45.0%
TGGTTCTTCTTGTGTCAGCT+AGG - chr5_2:67204752-67204771 Msa0783290:CDS 45.0%
GGTTCTTCTTGTGTCAGCTA+GGG - chr5_2:67204753-67204772 Msa0783290:CDS 45.0%
AGTAATGTCCACCACCATTG+TGG + chr5_2:67205370-67205389 None:intergenic 45.0%
TACTATGGAGGTGGTTCTCA+CGG - chr5_2:67205386-67205405 Msa0783290:intron 45.0%
! AGTCTTTTCCTCAGCTTGCA+CGG + chr5_2:67205492-67205511 None:intergenic 45.0%
AACGATGCCAAATATGGTGG+TGG - chr5_2:67205521-67205540 Msa0783290:CDS 45.0%
ATTCAGCATGTGAGCAGCAA+TGG + chr5_2:67205628-67205647 None:intergenic 45.0%
!! AGTTTTGTCCTCAGCTTGCA+CGG + chr5_2:67205657-67205676 None:intergenic 45.0%
AATCCTCATCCTAGGCCTCT+TGG - chr5_2:67204726-67204745 Msa0783290:CDS 50.0%
!! CTCACCCTTTTTGGCATCAG+AGG + chr5_2:67204794-67204813 None:intergenic 50.0%
TATGGCGGTTACCACAATGG+TGG - chr5_2:67205356-67205375 Msa0783290:intron 50.0%
!! GGTGGTGGACATTACTATGG+AGG - chr5_2:67205374-67205393 Msa0783290:intron 50.0%
GGTGGACATTACTATGGAGG+TGG - chr5_2:67205377-67205396 Msa0783290:intron 50.0%
GGTTGCCATCACTATTGCCA+CGG - chr5_2:67205437-67205456 Msa0783290:intron 50.0%
AATGGCCGTGGCAATAGTGA+TGG + chr5_2:67205445-67205464 None:intergenic 50.0%
ACTCGGCATATGAGCAGCAA+TGG + chr5_2:67205463-67205482 None:intergenic 50.0%
AGCTTGCACGGCAACAAACT+CGG + chr5_2:67205480-67205499 None:intergenic 50.0%
!! GGTGGTGGACATTACTATGG+AGG - chr5_2:67205374-67205393 Msa0783290:intron 50.0%
GGTGGACATTACTATGGAGG+TGG - chr5_2:67205377-67205396 Msa0783290:intron 50.0%
TATGGAGGTGGTTCTCACCA+CGG - chr5_2:67205551-67205570 Msa0783290:five_prime_UTR 50.0%
GGTTGCCATCACTATTGCCA+CGG - chr5_2:67205437-67205456 Msa0783290:intron 50.0%
AATGGCCGTGGCAATAGTGA+TGG + chr5_2:67205445-67205464 None:intergenic 50.0%
! ATTTGTTGCCGTGCAAGCTG+AGG - chr5_2:67205646-67205665 Msa0783290:five_prime_UTR 50.0%
AATCCTCATCCTAGGCCTCT+TGG - chr5_2:67204726-67204745 Msa0783290:CDS 50.0%
!! CTCACCCTTTTTGGCATCAG+AGG + chr5_2:67204794-67204813 None:intergenic 50.0%
TATGGCGGTTACCACAATGG+TGG - chr5_2:67205356-67205375 Msa0783290:intron 50.0%
!! GGTGGTGGACATTACTATGG+AGG - chr5_2:67205374-67205393 Msa0783290:intron 50.0%
GGTGGACATTACTATGGAGG+TGG - chr5_2:67205377-67205396 Msa0783290:intron 50.0%
GGTTGCCATCACTATTGCCA+CGG - chr5_2:67205437-67205456 Msa0783290:intron 50.0%
AATGGCCGTGGCAATAGTGA+TGG + chr5_2:67205445-67205464 None:intergenic 50.0%
ACTCGGCATATGAGCAGCAA+TGG + chr5_2:67205463-67205482 None:intergenic 50.0%
AGCTTGCACGGCAACAAACT+CGG + chr5_2:67205480-67205499 None:intergenic 50.0%
!! GGTGGTGGACATTACTATGG+AGG - chr5_2:67205374-67205393 Msa0783290:intron 50.0%
GGTGGACATTACTATGGAGG+TGG - chr5_2:67205377-67205396 Msa0783290:intron 50.0%
TATGGAGGTGGTTCTCACCA+CGG - chr5_2:67205551-67205570 Msa0783290:five_prime_UTR 50.0%
GGTTGCCATCACTATTGCCA+CGG - chr5_2:67205437-67205456 Msa0783290:intron 50.0%
AATGGCCGTGGCAATAGTGA+TGG + chr5_2:67205445-67205464 None:intergenic 50.0%
! ATTTGTTGCCGTGCAAGCTG+AGG - chr5_2:67205646-67205665 Msa0783290:five_prime_UTR 50.0%
TTGCCAAGAGGCCTAGGATG+AGG + chr5_2:67204732-67204751 None:intergenic 55.0%
CATCCTAGGCCTCTTGGCAA+TGG - chr5_2:67204732-67204751 Msa0783290:CDS 55.0%
GAACCATTGCCAAGAGGCCT+AGG + chr5_2:67204738-67204757 None:intergenic 55.0%
TATGGAGGTGGTTCTCACGG+TGG - chr5_2:67205389-67205408 Msa0783290:intron 55.0%
CATATGAGCAGCAATGGCCG+TGG + chr5_2:67205457-67205476 None:intergenic 55.0%
! GTTTGTTGCCGTGCAAGCTG+AGG - chr5_2:67205481-67205500 Msa0783290:CDS 55.0%
TTGCCAAGAGGCCTAGGATG+AGG + chr5_2:67204732-67204751 None:intergenic 55.0%
CATCCTAGGCCTCTTGGCAA+TGG - chr5_2:67204732-67204751 Msa0783290:CDS 55.0%
GAACCATTGCCAAGAGGCCT+AGG + chr5_2:67204738-67204757 None:intergenic 55.0%
TATGGAGGTGGTTCTCACGG+TGG - chr5_2:67205389-67205408 Msa0783290:intron 55.0%
CATATGAGCAGCAATGGCCG+TGG + chr5_2:67205457-67205476 None:intergenic 55.0%
! GTTTGTTGCCGTGCAAGCTG+AGG - chr5_2:67205481-67205500 Msa0783290:CDS 55.0%
GGCGGTTACCACAATGGTGG+TGG - chr5_2:67205359-67205378 Msa0783290:intron 60.0%
GGTGGAGGTGGTTCTCACCA+CGG - chr5_2:67205407-67205426 Msa0783290:intron 60.0%
GGTGGAGGTGGTTCTCACCA+TGG - chr5_2:67205407-67205426 Msa0783290:intron 60.0%
GGAGGTGGTTCTCACCATGG+TGG - chr5_2:67205575-67205594 Msa0783290:five_prime_UTR 60.0%
GGTGGTTCTCACCATGGTGG+AGG - chr5_2:67205578-67205597 Msa0783290:five_prime_UTR 60.0%
! GGTTCTCACCATGGTGGAGG+TGG - chr5_2:67205581-67205600 Msa0783290:five_prime_UTR 60.0%
GATGGCAACCACCTCCACCA+TGG + chr5_2:67205592-67205611 None:intergenic 60.0%
CATGTGAGCAGCAATGGCCG+TGG + chr5_2:67205622-67205641 None:intergenic 60.0%
GGCGGTTACCACAATGGTGG+TGG - chr5_2:67205359-67205378 Msa0783290:intron 60.0%
GGTGGAGGTGGTTCTCACCA+CGG - chr5_2:67205407-67205426 Msa0783290:intron 60.0%
GGTGGAGGTGGTTCTCACCA+TGG - chr5_2:67205407-67205426 Msa0783290:intron 60.0%
GGAGGTGGTTCTCACCATGG+TGG - chr5_2:67205575-67205594 Msa0783290:five_prime_UTR 60.0%
GGTGGTTCTCACCATGGTGG+AGG - chr5_2:67205578-67205597 Msa0783290:five_prime_UTR 60.0%
! GGTTCTCACCATGGTGGAGG+TGG - chr5_2:67205581-67205600 Msa0783290:five_prime_UTR 60.0%
GATGGCAACCACCTCCACCA+TGG + chr5_2:67205592-67205611 None:intergenic 60.0%
CATGTGAGCAGCAATGGCCG+TGG + chr5_2:67205622-67205641 None:intergenic 60.0%
GGAGGTGGTTCTCACGGTGG+AGG - chr5_2:67205392-67205411 Msa0783290:intron 65.0%
GGTGGTTCTCACGGTGGAGG+TGG - chr5_2:67205395-67205414 Msa0783290:intron 65.0%
GGAGGTGGTTCTCACCACGG+TGG - chr5_2:67205410-67205429 Msa0783290:intron 65.0%
GGTGGTTCTCACCACGGTGG+AGG - chr5_2:67205413-67205432 Msa0783290:intron 65.0%
GGTTCTCACCACGGTGGAGG+TGG - chr5_2:67205416-67205435 Msa0783290:intron 65.0%
GATGGCAACCACCTCCACCG+TGG + chr5_2:67205427-67205446 None:intergenic 65.0%
GGAGGTGGTTCTCACCACGG+TGG - chr5_2:67205410-67205429 Msa0783290:intron 65.0%
GGTGGTTCTCACCACGGTGG+AGG - chr5_2:67205413-67205432 Msa0783290:intron 65.0%
GGTTCTCACCACGGTGGAGG+TGG - chr5_2:67205416-67205435 Msa0783290:intron 65.0%
GGTGAGAACCACCTCCACCG+TGG + chr5_2:67205406-67205425 None:intergenic 65.0%
GGAGGTGGTTCTCACGGTGG+AGG - chr5_2:67205392-67205411 Msa0783290:intron 65.0%
GGTGGTTCTCACGGTGGAGG+TGG - chr5_2:67205395-67205414 Msa0783290:intron 65.0%
GGAGGTGGTTCTCACCACGG+TGG - chr5_2:67205410-67205429 Msa0783290:intron 65.0%
GGTGGTTCTCACCACGGTGG+AGG - chr5_2:67205413-67205432 Msa0783290:intron 65.0%
GGTTCTCACCACGGTGGAGG+TGG - chr5_2:67205416-67205435 Msa0783290:intron 65.0%
GATGGCAACCACCTCCACCG+TGG + chr5_2:67205427-67205446 None:intergenic 65.0%
GGAGGTGGTTCTCACCACGG+TGG - chr5_2:67205410-67205429 Msa0783290:intron 65.0%
GGTGGTTCTCACCACGGTGG+AGG - chr5_2:67205413-67205432 Msa0783290:intron 65.0%
GGTTCTCACCACGGTGGAGG+TGG - chr5_2:67205416-67205435 Msa0783290:intron 65.0%
GGTGAGAACCACCTCCACCG+TGG + chr5_2:67205406-67205425 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 67204565 67205685 67204565 ID=Msa0783290;Name=Msa0783290
chr5_2 mRNA 67204565 67205685 67204565 ID=Msa0783290-mRNA-1;Parent=Msa0783290;Name=Msa0783290-mRNA-1;_AED=0.00;_eAED=0.00;_QI=144|1|0.5|1|1|1|2|0|155
chr5_2 exon 67204565 67204932 67204565 ID=Msa0783290-mRNA-1:exon:20205;Parent=Msa0783290-mRNA-1
chr5_2 exon 67205442 67205685 67205442 ID=Msa0783290-mRNA-1:exon:20204;Parent=Msa0783290-mRNA-1
chr5_2 five_prime_UTR 67205542 67205685 67205542 ID=Msa0783290-mRNA-1:five_prime_utr;Parent=Msa0783290-mRNA-1
chr5_2 CDS 67205442 67205541 67205442 ID=Msa0783290-mRNA-1:cds;Parent=Msa0783290-mRNA-1
chr5_2 CDS 67204565 67204932 67204565 ID=Msa0783290-mRNA-1:cds;Parent=Msa0783290-mRNA-1
Gene Sequence

>Msa0783290

ATGGATTCAAAAAAGGCAATCCTCATCCTAGGCCTCTTGGCAATGGTTCTTCTTGTGTCAGCTAGGGACTTAACTGAAACTTCCTCTGATGCCAAAAAGGAGGTTGTTGAAAAGACTAATGAAGTAAACGATGCCAAATATGGCGGTTACCACAATGGTGGTGGACATTACTATGGAGGTGGTTCTCACGGTGGAGGTGGTTCTCACCACGGTGGAGGTGGTTGCCATCACTATTGCCACGGCCATTGCTGCTCATATGCCGAGTTTGTTGCCGTGCAAGCTGAGGAAAAGACTAATGAAGTAAACGATGCCAAATATGGTGGTGGACATTACTATGGAGGTGGTTCTCACCACGGTGGAGGTGGTTCTCACCATGGTGGAGGTGGTTGCCATCACTATTGCCACGGCCATTGCTGCTCACATGCTGAATTTGTTGCCGTGCAAGCTGAGGACAAAACTCAGAACTGA
Protein sequence

>Msa0783290

MDSKKAILILGLLAMVLLVSARDLTETSSDAKKEVVEKTNEVNDAKYGGYHNGGGHYYGGGSHGGGGSHHGGGGCHHYCHGHCCSYAEFVAVQAEEKTNEVNDAKYGGGHYYGGGSHHGGGGSHHGGGGCHHYCHGHCCSHAEFVAVQAEDKTQN*