AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0783270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0783270 MtrunA17_Chr5g0438511 86.000 50 6 1 1 49 1 50 1.46e-22 90.1
Msa0783270 MtrunA17_Chr5g0438501 75.806 62 14 1 1 61 1 62 2.38e-20 84.0
Msa0783270 MtrunA17_Chr5g0438491 98.182 55 1 0 1 55 1 55 1.09e-18 79.3
Msa0783270 MtrunA17_Chr5g0438481 96.364 55 2 0 1 55 1 55 1.17e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 111 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGTTCAAATGTGATATT+TGG 0.184410 5_2:+67155200 None:intergenic
AACTTCCACTGATGCTAAAA+AGG 0.209251 5_2:-67155083 Msa0783270:CDS
GTAACTACCACCACCATATT+TGG 0.210470 5_2:+67154094 None:intergenic
ATGGTTGTAGCCTCCATATT+TGG 0.284242 5_2:+67154442 None:intergenic
AAATTTCATAGAAATTTAAA+AGG 0.316144 5_2:+67153615 None:intergenic
GAAGTAAATGATGCCAAATA+TGG 0.357966 5_2:-67154455 Msa0783270:CDS
TTTAAAAGGAGAGGTAATAA+TGG 0.392845 5_2:+67153629 None:intergenic
GAAATGAATGATGCCAAATA+TGG 0.415776 5_2:-67154107 Msa0783270:CDS
GGTGGAGGTCACGGTGGTCA+TGG 0.421667 5_2:-67154173 Msa0783270:CDS
CATGCTAAGCCTCTTGGCTA+TGG 0.452537 5_2:-67155146 Msa0783270:CDS
GGAGGTGGTCACGGTGGTCA+CGG 0.459917 5_2:-67153957 Msa0783270:CDS
TATCTATCTATACTATATAG+TGG 0.463085 5_2:+67153758 None:intergenic
CACGGTGGACACGGTGGAGG+TGG 0.465334 5_2:-67153972 Msa0783270:CDS
CACGGTGGTCACGGTGGAGG+TGG 0.469212 5_2:-67154206 Msa0783270:CDS
TGCCGTGCAAACTGAGGAAA+AGG 0.478335 5_2:-67154135 Msa0783270:CDS
GGAGGTGGTTACAATGGTGG+TGG 0.479043 5_2:-67154233 Msa0783270:intron
GGACACGGTGGTCACGGTGG+AGG 0.486069 5_2:-67154209 Msa0783270:CDS
AATCCTCATGCTAAGCCTCT+TGG 0.494599 5_2:-67155152 Msa0783270:CDS
GGTGGAGGACACGGTGGTCA+CGG 0.494972 5_2:-67154215 Msa0783270:CDS
GGTGGTTACAATGGTGGTGG+AGG 0.504299 5_2:-67154188 Msa0783270:CDS
TACAATGGTGGTGGAGGTCA+CGG 0.506705 5_2:-67154182 Msa0783270:CDS
GGTCACGGTGGACACGGTGG+AGG 0.507552 5_2:-67153975 Msa0783270:CDS
TTTCCTCAGTGATGTCCGCT+AGG 0.509380 5_2:-67155117 Msa0783270:CDS
GGTGGATACAATGGTGGAGG+TGG 0.521371 5_2:-67154269 Msa0783270:CDS
GGAGGTGGTCACGGTGGACA+CGG 0.522199 5_2:-67153981 Msa0783270:CDS
GGTTACCACAACGGTGGCGG+TGG 0.525728 5_2:-67154287 Msa0783270:CDS
AAATATGGAGGCTACAACCA+TGG 0.526109 5_2:-67154440 Msa0783270:CDS
GGTGGTTACAACCACGGTGG+AGG 0.531004 5_2:-67154332 Msa0783270:CDS
GGTGGTTACAATGGTGGTGG+AGG 0.535349 5_2:-67154230 Msa0783270:CDS
TCATAGAAATTTAAAAGGAG+AGG 0.536272 5_2:+67153620 None:intergenic
GGTGGTTACCACAACGGTGG+CGG 0.536272 5_2:-67154290 Msa0783270:CDS
TTCCTCAGTGATGTCCGCTA+GGG 0.540952 5_2:-67155116 Msa0783270:CDS
AGTTATCACCACGGTGGAGG+TGG 0.545081 5_2:-67154017 Msa0783270:CDS
GGACACGGTGGAGGTGGTCA+CGG 0.548236 5_2:-67153966 Msa0783270:CDS
GGAGGTTACAACCATGGTGG+AGG 0.550860 5_2:-67154368 Msa0783270:CDS
GGTTACAACCATGGTGGAGG+TGG 0.550910 5_2:-67153996 Msa0783270:CDS
GGTTACAACCATGGTGGAGG+TGG 0.550910 5_2:-67154365 Msa0783270:CDS
GGTGGTTACCACAACGGTGG+TGG 0.551258 5_2:-67154311 Msa0783270:CDS
GGCGGTGGATACAATGGTGG+AGG 0.551699 5_2:-67154272 Msa0783270:CDS
GGTTACAACCACGGTGGAGG+TGG 0.554746 5_2:-67154329 Msa0783270:CDS
TACAATGGTGGTGGAGGACA+CGG 0.556001 5_2:-67154224 Msa0783270:CDS
GGTGGTTACAACCATGGTGG+AGG 0.556342 5_2:-67153999 Msa0783270:CDS
GGAGGTGGTTACAATGGTGG+TGG 0.559565 5_2:-67154191 Msa0783270:CDS
GGAGGTGGTTACAACGGTGG+TGG 0.562839 5_2:-67154350 Msa0783270:CDS
CACGGTGGAGGTGGTTACAA+TGG 0.563087 5_2:-67154197 Msa0783270:CDS
GGTAGTTATCACCACGGTGG+AGG 0.564481 5_2:-67154020 Msa0783270:CDS
AACCATGGTGGAGGTGGTCA+CGG 0.564900 5_2:-67153990 Msa0783270:CDS
GGTTACCACAACGGTGGTGG+TGG 0.571583 5_2:-67154308 Msa0783270:CDS
AACGGTGGCGGTGGATACAA+TGG 0.572921 5_2:-67154278 Msa0783270:CDS
TGTATCCACCGCCACCGTTG+TGG 0.577751 5_2:+67154282 None:intergenic
GGTGGTTATAACCACGGTGG+TGG 0.581184 5_2:-67154419 Msa0783270:CDS
GGAGGTTATAACCACGGTGG+AGG 0.590681 5_2:-67154386 Msa0783270:CDS
ATAGATAGATATTTCATCAG+TGG 0.597210 5_2:-67153746 Msa0783270:three_prime_UTR
CATGGTGGAGGTGGTTACAA+TGG 0.597788 5_2:-67154239 Msa0783270:intron
AACCACGGTGGTGGTTACAA+TGG 0.598930 5_2:-67154410 Msa0783270:CDS
CACGGTGGTGGTTACAATGG+TGG 0.608752 5_2:-67154407 Msa0783270:CDS
GGTAGTTACAACCACGGAGG+AGG 0.611011 5_2:-67154041 Msa0783270:CDS
GGTGGAGGTGGTTACAATGG+TGG 0.613370 5_2:-67154236 Msa0783270:intron
TATTACTGAGAAAGAGTGCA+TGG 0.619731 5_2:+67153874 None:intergenic
TTTGAACAGATATTGAACAA+TGG 0.621738 5_2:-67155188 Msa0783270:exon
CACCGTGACCACCTCCACCA+TGG 0.622693 5_2:+67153988 None:intergenic
AACGGTGGTGGTTACAACCA+CGG 0.623888 5_2:-67154338 Msa0783270:CDS
GGTGGTGGTTACAATGGTGG+AGG 0.625782 5_2:-67154404 Msa0783270:CDS
GGTAACCACCACCACCGTTG+TGG 0.626618 5_2:+67154303 None:intergenic
GTAAATGATGCCAAATATGG+AGG 0.627438 5_2:-67154452 Msa0783270:CDS
CGTTGTAACCACCTCCACCA+TGG 0.637472 5_2:+67154357 None:intergenic
AATGATGCCAAATATGGTGG+TGG 0.637670 5_2:-67154101 Msa0783270:intron
GGAGGTCACGGTGGTCATGG+CGG 0.640286 5_2:-67154170 Msa0783270:CDS
GTCTGTTGCCGTGCAAACTG+AGG 0.643641 5_2:-67154141 Msa0783270:CDS
AACCATGGTGGTTATAACCA+CGG 0.645055 5_2:-67154425 Msa0783270:CDS
CATGGTGGAGGTGGTTACAA+CGG 0.645837 5_2:-67154356 Msa0783270:CDS
CACGGTGGAGGTTACAACCA+TGG 0.648231 5_2:-67154374 Msa0783270:CDS
GGTGGTCACGGTGGACACGG+TGG 0.653298 5_2:-67153978 Msa0783270:CDS
GGAGGACACGGTGGTCACGG+TGG 0.653298 5_2:-67154212 Msa0783270:CDS
CACGGTGGAGGTGGTCACGG+TGG 0.654877 5_2:-67153963 Msa0783270:CDS
GGTGGTGGTGGTTACCACAA+CGG 0.657111 5_2:-67154296 Msa0783270:CDS
TAGCCAAGAGGCTTAGCATG+AGG 0.658082 5_2:+67155149 None:intergenic
CACCGTGGTTATAACCACCA+TGG 0.663353 5_2:+67154423 None:intergenic
GGTGGAGGTGGTTACCACAA+CGG 0.671710 5_2:-67154317 Msa0783270:CDS
GGTGGAGGTGGTTACAACCA+TGG 0.677197 5_2:-67154005 Msa0783270:CDS
GGTGGAGGTGGTTACAACCA+TGG 0.679817 5_2:-67154257 Msa0783270:intron
GGTGGAGGTGGTTACAATGG+TGG 0.682012 5_2:-67154194 Msa0783270:CDS
ATGAATGATGCCAAATATGG+TGG 0.691119 5_2:-67154104 Msa0783270:CDS
AAATAAGAGCCATAGCCAAG+AGG 0.700367 5_2:+67155137 None:intergenic
CATGGTGGAGGTGGTCACGG+TGG 0.701255 5_2:-67153987 Msa0783270:CDS
GGTGATAACTACCTCCTCCG+TGG 0.701736 5_2:+67154030 None:intergenic
GGTGGAGGTGGTTACAACGG+TGG 0.713237 5_2:-67154353 Msa0783270:CDS
GGTGGTGGTTACCACAACGG+TGG 0.714966 5_2:-67154293 Msa0783270:CDS
AATGGTGGTGGAGGTCACGG+TGG 0.715780 5_2:-67154179 Msa0783270:CDS
AATGGTGGAGGTTATAACCA+CGG 0.716087 5_2:-67154392 Msa0783270:CDS
GGTGGCGGTGGATACAATGG+TGG 0.717019 5_2:-67154275 Msa0783270:CDS
TGTGGTAACCACCTCCACCG+TGG 0.717584 5_2:+67154321 None:intergenic
TCACGGTGCTGACCAAACTG+AGG 0.720959 5_2:-67153940 Msa0783270:CDS
AGTTTCAGTTAAGTCCCTAG+CGG 0.722649 5_2:+67155102 None:intergenic
GTCCCTAGCGGACATCACTG+AGG 0.722830 5_2:+67155114 None:intergenic
GGAGGTGGTTACCACAACGG+TGG 0.726472 5_2:-67154314 Msa0783270:CDS
AATGGTGGTGGAGGACACGG+TGG 0.730218 5_2:-67154221 Msa0783270:CDS
GGTGGAGGTAGTTACAACCA+CGG 0.730738 5_2:-67154047 Msa0783270:intron
GGTTGTAACCACCTCCACCG+TGG 0.734511 5_2:+67154009 None:intergenic
CACCATTGTAACCACCACCG+TGG 0.740555 5_2:+67154408 None:intergenic
GGAGGTGGTTACAACCATGG+TGG 0.742197 5_2:-67154002 Msa0783270:CDS
GGTGGAGGTTACAACCATGG+TGG 0.744001 5_2:-67154371 Msa0783270:CDS
TATGGAGGCTACAACCATGG+TGG 0.747738 5_2:-67154437 Msa0783270:CDS
GGAGGTAGTTATCACCACGG+TGG 0.769330 5_2:-67154023 Msa0783270:CDS
GGAGGAGGTAGTTATCACCA+CGG 0.770033 5_2:-67154026 Msa0783270:CDS
GGTGGAGGTTATAACCACGG+TGG 0.774475 5_2:-67154389 Msa0783270:CDS
CATGGTTGTAACCTCCACCG+TGG 0.775135 5_2:+67154375 None:intergenic
GATGTGCAGCAGTTTCAGTG+TGG 0.776308 5_2:-67153797 Msa0783270:three_prime_UTR
CATGGTGGTTATAACCACGG+TGG 0.779726 5_2:-67154422 Msa0783270:CDS
GGTGGTGGTTACAACCACGG+TGG 0.791258 5_2:-67154335 Msa0783270:CDS
GGAGGTAGTTACAACCACGG+AGG 0.812225 5_2:-67154044 Msa0783270:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATAATATAT+AGG - chr5_2:67154009-67154028 Msa0783270:CDS 0.0%
!! ATATATATATATAATATATA+GGG - chr5_2:67154010-67154029 Msa0783270:CDS 0.0%
!! ATATATATATATATATATAT+GGG + chr5_2:67153950-67153969 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr5_2:67153951-67153970 None:intergenic 0.0%
!! TATATATATATATAATATAT+AGG - chr5_2:67154009-67154028 Msa0783270:CDS 0.0%
!! ATATATATATATAATATATA+GGG - chr5_2:67154010-67154029 Msa0783270:CDS 0.0%
!! ATATATATATATATATATAT+GGG + chr5_2:67153950-67153969 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr5_2:67153951-67153970 None:intergenic 0.0%
!! AAATTTCATAGAAATTTAAA+AGG + chr5_2:67155190-67155209 None:intergenic 10.0%
!! AAATTTCATAGAAATTTAAA+AGG + chr5_2:67155190-67155209 None:intergenic 10.0%
!!! TCATTTTTTATATAACATTG+AGG + chr5_2:67153892-67153911 None:intergenic 15.0%
!!! TATGCTATGAATTTTTTTAT+CGG + chr5_2:67155214-67155233 None:intergenic 15.0%
!!! TCATTTTTTATATAACATTG+AGG + chr5_2:67153892-67153911 None:intergenic 15.0%
!!! TATGCTATGAATTTTTTTAT+CGG + chr5_2:67155214-67155233 None:intergenic 15.0%
!! ATAAAAGACATCTTCATAAA+AGG + chr5_2:67154051-67154070 None:intergenic 20.0%
!!! TGTGTGTTGATATAAAAAAA+AGG - chr5_2:67154974-67154993 Msa0783270:intron 20.0%
!! TATCTATCTATACTATATAG+TGG + chr5_2:67155047-67155066 None:intergenic 20.0%
!! ATAAAAGACATCTTCATAAA+AGG + chr5_2:67154051-67154070 None:intergenic 20.0%
!!! TGTGTGTTGATATAAAAAAA+AGG - chr5_2:67154974-67154993 Msa0783270:intron 20.0%
!! TATCTATCTATACTATATAG+TGG + chr5_2:67155047-67155066 None:intergenic 20.0%
! ATCTGTTCAAATGTGATATT+TGG + chr5_2:67153605-67153624 None:intergenic 25.0%
! TTTGAACAGATATTGAACAA+TGG - chr5_2:67153614-67153633 Msa0783270:three_prime_UTR 25.0%
!! TTGAACAATGGATTCAAAAA+AGG - chr5_2:67153626-67153645 Msa0783270:three_prime_UTR 25.0%
!!! ATTCTTTCCTACTTTTTTGA+AGG - chr5_2:67153789-67153808 Msa0783270:three_prime_UTR 25.0%
! GAATTATCCTTCAAAAAAGT+AGG + chr5_2:67153799-67153818 None:intergenic 25.0%
! CATATATATTATGTTTGCAG+AGG - chr5_2:67154307-67154326 Msa0783270:CDS 25.0%
! ATAGATAGATATTTCATCAG+TGG - chr5_2:67155056-67155075 Msa0783270:intron 25.0%
! TTTAAAAGGAGAGGTAATAA+TGG + chr5_2:67155176-67155195 None:intergenic 25.0%
! TCATAGAAATTTAAAAGGAG+AGG + chr5_2:67155185-67155204 None:intergenic 25.0%
! ATCTGTTCAAATGTGATATT+TGG + chr5_2:67153605-67153624 None:intergenic 25.0%
! TTTGAACAGATATTGAACAA+TGG - chr5_2:67153614-67153633 Msa0783270:three_prime_UTR 25.0%
!! TTGAACAATGGATTCAAAAA+AGG - chr5_2:67153626-67153645 Msa0783270:three_prime_UTR 25.0%
!!! ATTCTTTCCTACTTTTTTGA+AGG - chr5_2:67153789-67153808 Msa0783270:three_prime_UTR 25.0%
! GAATTATCCTTCAAAAAAGT+AGG + chr5_2:67153799-67153818 None:intergenic 25.0%
! CATATATATTATGTTTGCAG+AGG - chr5_2:67154307-67154326 Msa0783270:CDS 25.0%
! ATAGATAGATATTTCATCAG+TGG - chr5_2:67155056-67155075 Msa0783270:intron 25.0%
! TTTAAAAGGAGAGGTAATAA+TGG + chr5_2:67155176-67155195 None:intergenic 25.0%
! TCATAGAAATTTAAAAGGAG+AGG + chr5_2:67155185-67155204 None:intergenic 25.0%
!! ACACCAACTTACTTTTATGA+AGG - chr5_2:67154100-67154119 Msa0783270:intron 30.0%
ACACCTTCATAAAAGTAAGT+TGG + chr5_2:67154106-67154125 None:intergenic 30.0%
AAAGTGAAAATCACACCTTA+AGG - chr5_2:67154148-67154167 Msa0783270:CDS 30.0%
! TTTTAACAAGTCACACCTTA+AGG + chr5_2:67154166-67154185 None:intergenic 30.0%
GAAGTAAATGATGCCAAATA+TGG - chr5_2:67154347-67154366 Msa0783270:CDS 30.0%
GAAATGAATGATGCCAAATA+TGG - chr5_2:67154695-67154714 Msa0783270:intron 30.0%
!!! ACACACTCATGTCATTTTTT+TGG + chr5_2:67155137-67155156 None:intergenic 30.0%
!! ACACCAACTTACTTTTATGA+AGG - chr5_2:67154100-67154119 Msa0783270:intron 30.0%
ACACCTTCATAAAAGTAAGT+TGG + chr5_2:67154106-67154125 None:intergenic 30.0%
AAAGTGAAAATCACACCTTA+AGG - chr5_2:67154148-67154167 Msa0783270:CDS 30.0%
! TTTTAACAAGTCACACCTTA+AGG + chr5_2:67154166-67154185 None:intergenic 30.0%
GAAGTAAATGATGCCAAATA+TGG - chr5_2:67154347-67154366 Msa0783270:CDS 30.0%
GAAATGAATGATGCCAAATA+TGG - chr5_2:67154695-67154714 Msa0783270:intron 30.0%
!!! ACACACTCATGTCATTTTTT+TGG + chr5_2:67155137-67155156 None:intergenic 30.0%
AACTTCCACTGATGCTAAAA+AGG - chr5_2:67153719-67153738 Msa0783270:three_prime_UTR 35.0%
ACTTCCACTGATGCTAAAAA+GGG - chr5_2:67153720-67153739 Msa0783270:three_prime_UTR 35.0%
TTGTTAAAAGACACCACCAA+AGG - chr5_2:67154177-67154196 Msa0783270:CDS 35.0%
TGTTAAAAGACACCACCAAA+GGG - chr5_2:67154178-67154197 Msa0783270:CDS 35.0%
GTAAATGATGCCAAATATGG+AGG - chr5_2:67154350-67154369 Msa0783270:CDS 35.0%
ATGAATGATGCCAAATATGG+TGG - chr5_2:67154698-67154717 Msa0783270:intron 35.0%
!! TTTGAGTTTTGTCCTCAGTT+TGG + chr5_2:67154877-67154896 None:intergenic 35.0%
! TATTACTGAGAAAGAGTGCA+TGG + chr5_2:67154931-67154950 None:intergenic 35.0%
AACTTCCACTGATGCTAAAA+AGG - chr5_2:67153719-67153738 Msa0783270:three_prime_UTR 35.0%
ACTTCCACTGATGCTAAAAA+GGG - chr5_2:67153720-67153739 Msa0783270:three_prime_UTR 35.0%
TTGTTAAAAGACACCACCAA+AGG - chr5_2:67154177-67154196 Msa0783270:CDS 35.0%
TGTTAAAAGACACCACCAAA+GGG - chr5_2:67154178-67154197 Msa0783270:CDS 35.0%
GTAAATGATGCCAAATATGG+AGG - chr5_2:67154350-67154369 Msa0783270:CDS 35.0%
ATGAATGATGCCAAATATGG+TGG - chr5_2:67154698-67154717 Msa0783270:intron 35.0%
!! TTTGAGTTTTGTCCTCAGTT+TGG + chr5_2:67154877-67154896 None:intergenic 35.0%
! TATTACTGAGAAAGAGTGCA+TGG + chr5_2:67154931-67154950 None:intergenic 35.0%
AAATAAGAGCCATAGCCAAG+AGG + chr5_2:67153668-67153687 None:intergenic 40.0%
AGTTTCAGTTAAGTCCCTAG+CGG + chr5_2:67153703-67153722 None:intergenic 40.0%
! TTTTGTTACAAGCCACCCTT+TGG + chr5_2:67154196-67154215 None:intergenic 40.0%
ATGGTTGTAGCCTCCATATT+TGG + chr5_2:67154363-67154382 None:intergenic 40.0%
AAATATGGAGGCTACAACCA+TGG - chr5_2:67154362-67154381 Msa0783270:CDS 40.0%
AACCATGGTGGTTATAACCA+CGG - chr5_2:67154377-67154396 Msa0783270:CDS 40.0%
! AATGGTGGAGGTTATAACCA+CGG - chr5_2:67154410-67154429 Msa0783270:CDS 40.0%
AATGATGCCAAATATGGTGG+TGG - chr5_2:67154701-67154720 Msa0783270:intron 40.0%
GTAACTACCACCACCATATT+TGG + chr5_2:67154711-67154730 None:intergenic 40.0%
AAATAAGAGCCATAGCCAAG+AGG + chr5_2:67153668-67153687 None:intergenic 40.0%
AGTTTCAGTTAAGTCCCTAG+CGG + chr5_2:67153703-67153722 None:intergenic 40.0%
! TTTTGTTACAAGCCACCCTT+TGG + chr5_2:67154196-67154215 None:intergenic 40.0%
ATGGTTGTAGCCTCCATATT+TGG + chr5_2:67154363-67154382 None:intergenic 40.0%
AAATATGGAGGCTACAACCA+TGG - chr5_2:67154362-67154381 Msa0783270:CDS 40.0%
AACCATGGTGGTTATAACCA+CGG - chr5_2:67154377-67154396 Msa0783270:CDS 40.0%
! AATGGTGGAGGTTATAACCA+CGG - chr5_2:67154410-67154429 Msa0783270:CDS 40.0%
AATGATGCCAAATATGGTGG+TGG - chr5_2:67154701-67154720 Msa0783270:intron 40.0%
GTAACTACCACCACCATATT+TGG + chr5_2:67154711-67154730 None:intergenic 40.0%
AATCCTCATGCTAAGCCTCT+TGG - chr5_2:67153650-67153669 Msa0783270:three_prime_UTR 45.0%
!! CTCACCCTTTTTAGCATCAG+TGG + chr5_2:67153727-67153746 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr5_2:67154181-67154200 Msa0783270:CDS 45.0%
! AGCCTTTTCCTCAGTTTGCA+CGG + chr5_2:67154672-67154691 None:intergenic 45.0%
CATGGTTGTAACTTCCTCCA+TGG + chr5_2:67154736-67154755 None:intergenic 45.0%
CATGGAGGAAGTTACAACCA+TGG - chr5_2:67154734-67154753 Msa0783270:intron 45.0%
AATCCTCATGCTAAGCCTCT+TGG - chr5_2:67153650-67153669 Msa0783270:three_prime_UTR 45.0%
!! CTCACCCTTTTTAGCATCAG+TGG + chr5_2:67153727-67153746 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr5_2:67154181-67154200 Msa0783270:CDS 45.0%
! AGCCTTTTCCTCAGTTTGCA+CGG + chr5_2:67154672-67154691 None:intergenic 45.0%
CATGGTTGTAACTTCCTCCA+TGG + chr5_2:67154736-67154755 None:intergenic 45.0%
CATGGAGGAAGTTACAACCA+TGG - chr5_2:67154734-67154753 Msa0783270:intron 45.0%
!! TACATATTTATTTATATTTA+AGG - chr5_2:67154268-67154287 Msa0783270:CDS 5.0%
!! TACATATTTATTTATATTTA+AGG - chr5_2:67154268-67154287 Msa0783270:CDS 5.0%
TAGCCAAGAGGCTTAGCATG+AGG + chr5_2:67153656-67153675 None:intergenic 50.0%
CATGCTAAGCCTCTTGGCTA+TGG - chr5_2:67153656-67153675 Msa0783270:three_prime_UTR 50.0%
TTTCCTCAGTGATGTCCGCT+AGG - chr5_2:67153685-67153704 Msa0783270:three_prime_UTR 50.0%
TTCCTCAGTGATGTCCGCTA+GGG - chr5_2:67153686-67153705 Msa0783270:three_prime_UTR 50.0%
TGTTACAAGCCACCCTTTGG+TGG + chr5_2:67154193-67154212 None:intergenic 50.0%
TATGGAGGCTACAACCATGG+TGG - chr5_2:67154365-67154384 Msa0783270:CDS 50.0%
CACCGTGGTTATAACCACCA+TGG + chr5_2:67154382-67154401 None:intergenic 50.0%
CATGGTGGTTATAACCACGG+TGG - chr5_2:67154380-67154399 Msa0783270:CDS 50.0%
! AACCACGGTGGTGGTTACAA+TGG - chr5_2:67154392-67154411 Msa0783270:CDS 50.0%
! CATGGTGGAGGTGGTTACAA+CGG - chr5_2:67154446-67154465 Msa0783270:CDS 50.0%
! AACGGTGGTGGTTACAACCA+CGG - chr5_2:67154464-67154483 Msa0783270:CDS 50.0%
CATTGTAACCACCTCCACCA+TGG + chr5_2:67154565-67154584 None:intergenic 50.0%
! CATGGTGGAGGTGGTTACAA+TGG - chr5_2:67154446-67154465 Msa0783270:CDS 50.0%
!! TACAATGGTGGTGGAGGACA+CGG - chr5_2:67154578-67154597 Msa0783270:intron 50.0%
!! TACAATGGTGGTGGAGGTCA+CGG - chr5_2:67154620-67154639 Msa0783270:intron 50.0%
TGCCGTGCAAACTGAGGAAA+AGG - chr5_2:67154667-67154686 Msa0783270:intron 50.0%
! GGTGGTGGTAGTTACAACCA+TGG - chr5_2:67154716-67154735 Msa0783270:intron 50.0%
GGTGGTAGTTACAACCATGG+AGG - chr5_2:67154719-67154738 Msa0783270:intron 50.0%
GGAGGAAGTTACAACCATGG+TGG - chr5_2:67154737-67154756 Msa0783270:intron 50.0%
GGAAGTTACAACCATGGTGG+AGG - chr5_2:67154740-67154759 Msa0783270:intron 50.0%
GGTTGTAACTACCTCCACCA+TGG + chr5_2:67154754-67154773 None:intergenic 50.0%
GGTGGAGGTAGTTACAACCA+CGG - chr5_2:67154755-67154774 Msa0783270:intron 50.0%
GGAGGAGGTAGTTATCACCA+CGG - chr5_2:67154776-67154795 Msa0783270:intron 50.0%
GATGTGCAGCAGTTTCAGTG+TGG - chr5_2:67155005-67155024 Msa0783270:intron 50.0%
TAGCCAAGAGGCTTAGCATG+AGG + chr5_2:67153656-67153675 None:intergenic 50.0%
CATGCTAAGCCTCTTGGCTA+TGG - chr5_2:67153656-67153675 Msa0783270:three_prime_UTR 50.0%
TTTCCTCAGTGATGTCCGCT+AGG - chr5_2:67153685-67153704 Msa0783270:three_prime_UTR 50.0%
TTCCTCAGTGATGTCCGCTA+GGG - chr5_2:67153686-67153705 Msa0783270:three_prime_UTR 50.0%
TGTTACAAGCCACCCTTTGG+TGG + chr5_2:67154193-67154212 None:intergenic 50.0%
TATGGAGGCTACAACCATGG+TGG - chr5_2:67154365-67154384 Msa0783270:CDS 50.0%
CACCGTGGTTATAACCACCA+TGG + chr5_2:67154382-67154401 None:intergenic 50.0%
CATGGTGGTTATAACCACGG+TGG - chr5_2:67154380-67154399 Msa0783270:CDS 50.0%
! AACCACGGTGGTGGTTACAA+TGG - chr5_2:67154392-67154411 Msa0783270:CDS 50.0%
! CATGGTGGAGGTGGTTACAA+CGG - chr5_2:67154446-67154465 Msa0783270:CDS 50.0%
! AACGGTGGTGGTTACAACCA+CGG - chr5_2:67154464-67154483 Msa0783270:CDS 50.0%
CATTGTAACCACCTCCACCA+TGG + chr5_2:67154565-67154584 None:intergenic 50.0%
! CATGGTGGAGGTGGTTACAA+TGG - chr5_2:67154446-67154465 Msa0783270:CDS 50.0%
!! TACAATGGTGGTGGAGGACA+CGG - chr5_2:67154578-67154597 Msa0783270:intron 50.0%
!! TACAATGGTGGTGGAGGTCA+CGG - chr5_2:67154620-67154639 Msa0783270:intron 50.0%
TGCCGTGCAAACTGAGGAAA+AGG - chr5_2:67154667-67154686 Msa0783270:intron 50.0%
! GGTGGTGGTAGTTACAACCA+TGG - chr5_2:67154716-67154735 Msa0783270:intron 50.0%
GGTGGTAGTTACAACCATGG+AGG - chr5_2:67154719-67154738 Msa0783270:intron 50.0%
GGAGGAAGTTACAACCATGG+TGG - chr5_2:67154737-67154756 Msa0783270:intron 50.0%
GGAAGTTACAACCATGGTGG+AGG - chr5_2:67154740-67154759 Msa0783270:intron 50.0%
GGTTGTAACTACCTCCACCA+TGG + chr5_2:67154754-67154773 None:intergenic 50.0%
GGTGGAGGTAGTTACAACCA+CGG - chr5_2:67154755-67154774 Msa0783270:intron 50.0%
GGAGGAGGTAGTTATCACCA+CGG - chr5_2:67154776-67154795 Msa0783270:intron 50.0%
GATGTGCAGCAGTTTCAGTG+TGG - chr5_2:67155005-67155024 Msa0783270:intron 50.0%
GGTGGTTATAACCACGGTGG+TGG - chr5_2:67154383-67154402 Msa0783270:CDS 55.0%
CACCATTGTAACCACCACCG+TGG + chr5_2:67154397-67154416 None:intergenic 55.0%
! CACGGTGGTGGTTACAATGG+TGG - chr5_2:67154395-67154414 Msa0783270:CDS 55.0%
! GGTGGTGGTTACAATGGTGG+AGG - chr5_2:67154398-67154417 Msa0783270:CDS 55.0%
GGTGGAGGTTATAACCACGG+TGG - chr5_2:67154413-67154432 Msa0783270:CDS 55.0%
GGAGGTTATAACCACGGTGG+AGG - chr5_2:67154416-67154435 Msa0783270:CDS 55.0%
CATGGTTGTAACCTCCACCG+TGG + chr5_2:67154430-67154449 None:intergenic 55.0%
CACGGTGGAGGTTACAACCA+TGG - chr5_2:67154428-67154447 Msa0783270:CDS 55.0%
GGTGGAGGTTACAACCATGG+TGG - chr5_2:67154431-67154450 Msa0783270:CDS 55.0%
GGAGGTTACAACCATGGTGG+AGG - chr5_2:67154434-67154453 Msa0783270:CDS 55.0%
! GGTTACAACCATGGTGGAGG+TGG - chr5_2:67154437-67154456 Msa0783270:CDS 55.0%
CGTTGTAACCACCTCCACCA+TGG + chr5_2:67154448-67154467 None:intergenic 55.0%
GGTGGAGGTGGTTACCACAA+CGG - chr5_2:67154485-67154504 Msa0783270:intron 55.0%
!! GGTGGTGGTGGTTACCACAA+CGG - chr5_2:67154506-67154525 Msa0783270:intron 55.0%
! AACGGTGGCGGTGGATACAA+TGG - chr5_2:67154524-67154543 Msa0783270:intron 55.0%
! GGTGGATACAATGGTGGAGG+TGG - chr5_2:67154533-67154552 Msa0783270:intron 55.0%
GGTGGAGGTGGTTACAACCA+TGG - chr5_2:67154545-67154564 Msa0783270:intron 55.0%
GGAGGTGGTTACAACCATGG+TGG - chr5_2:67154548-67154567 Msa0783270:intron 55.0%
GGTGGTTACAACCATGGTGG+AGG - chr5_2:67154551-67154570 Msa0783270:intron 55.0%
! GGTTACAACCATGGTGGAGG+TGG - chr5_2:67154437-67154456 Msa0783270:CDS 55.0%
GGTGGAGGTGGTTACAATGG+TGG - chr5_2:67154566-67154585 Msa0783270:intron 55.0%
GGAGGTGGTTACAATGGTGG+TGG - chr5_2:67154569-67154588 Msa0783270:intron 55.0%
!! GGTGGTTACAATGGTGGTGG+AGG - chr5_2:67154572-67154591 Msa0783270:intron 55.0%
CACGGTGGAGGTGGTTACAA+TGG - chr5_2:67154605-67154624 Msa0783270:intron 55.0%
GGTGGAGGTGGTTACAATGG+TGG - chr5_2:67154566-67154585 Msa0783270:intron 55.0%
GGAGGTGGTTACAATGGTGG+TGG - chr5_2:67154569-67154588 Msa0783270:intron 55.0%
!! GGTGGTTACAATGGTGGTGG+AGG - chr5_2:67154572-67154591 Msa0783270:intron 55.0%
GTCTGTTGCCGTGCAAACTG+AGG - chr5_2:67154661-67154680 Msa0783270:intron 55.0%
GGAGGTAGTTACAACCACGG+AGG - chr5_2:67154758-67154777 Msa0783270:intron 55.0%
GGTAGTTACAACCACGGAGG+AGG - chr5_2:67154761-67154780 Msa0783270:intron 55.0%
GGTGATAACTACCTCCTCCG+TGG + chr5_2:67154775-67154794 None:intergenic 55.0%
GGAGGTAGTTATCACCACGG+TGG - chr5_2:67154779-67154798 Msa0783270:intron 55.0%
GGTAGTTATCACCACGGTGG+AGG - chr5_2:67154782-67154801 Msa0783270:intron 55.0%
AGTTATCACCACGGTGGAGG+TGG - chr5_2:67154785-67154804 Msa0783270:intron 55.0%
GGTGGAGGTGGTTACAACCA+TGG - chr5_2:67154545-67154564 Msa0783270:intron 55.0%
GGAGGTGGTTACAACCATGG+TGG - chr5_2:67154548-67154567 Msa0783270:intron 55.0%
GGTGGTTACAACCATGGTGG+AGG - chr5_2:67154551-67154570 Msa0783270:intron 55.0%
! GGTTACAACCATGGTGGAGG+TGG - chr5_2:67154437-67154456 Msa0783270:CDS 55.0%
! AACCATGGTGGAGGTGGTCA+CGG - chr5_2:67154812-67154831 Msa0783270:intron 55.0%
!! TCACGGTGCTGACCAAACTG+AGG - chr5_2:67154862-67154881 Msa0783270:intron 55.0%
GGTGGTTATAACCACGGTGG+TGG - chr5_2:67154383-67154402 Msa0783270:CDS 55.0%
CACCATTGTAACCACCACCG+TGG + chr5_2:67154397-67154416 None:intergenic 55.0%
! CACGGTGGTGGTTACAATGG+TGG - chr5_2:67154395-67154414 Msa0783270:CDS 55.0%
! GGTGGTGGTTACAATGGTGG+AGG - chr5_2:67154398-67154417 Msa0783270:CDS 55.0%
GGTGGAGGTTATAACCACGG+TGG - chr5_2:67154413-67154432 Msa0783270:CDS 55.0%
GGAGGTTATAACCACGGTGG+AGG - chr5_2:67154416-67154435 Msa0783270:CDS 55.0%
CATGGTTGTAACCTCCACCG+TGG + chr5_2:67154430-67154449 None:intergenic 55.0%
CACGGTGGAGGTTACAACCA+TGG - chr5_2:67154428-67154447 Msa0783270:CDS 55.0%
GGTGGAGGTTACAACCATGG+TGG - chr5_2:67154431-67154450 Msa0783270:CDS 55.0%
GGAGGTTACAACCATGGTGG+AGG - chr5_2:67154434-67154453 Msa0783270:CDS 55.0%
! GGTTACAACCATGGTGGAGG+TGG - chr5_2:67154437-67154456 Msa0783270:CDS 55.0%
CGTTGTAACCACCTCCACCA+TGG + chr5_2:67154448-67154467 None:intergenic 55.0%
GGTGGAGGTGGTTACCACAA+CGG - chr5_2:67154485-67154504 Msa0783270:intron 55.0%
!! GGTGGTGGTGGTTACCACAA+CGG - chr5_2:67154506-67154525 Msa0783270:intron 55.0%
! AACGGTGGCGGTGGATACAA+TGG - chr5_2:67154524-67154543 Msa0783270:intron 55.0%
! GGTGGATACAATGGTGGAGG+TGG - chr5_2:67154533-67154552 Msa0783270:intron 55.0%
GGTGGAGGTGGTTACAACCA+TGG - chr5_2:67154545-67154564 Msa0783270:intron 55.0%
GGAGGTGGTTACAACCATGG+TGG - chr5_2:67154548-67154567 Msa0783270:intron 55.0%
GGTGGTTACAACCATGGTGG+AGG - chr5_2:67154551-67154570 Msa0783270:intron 55.0%
! GGTTACAACCATGGTGGAGG+TGG - chr5_2:67154437-67154456 Msa0783270:CDS 55.0%
GGTGGAGGTGGTTACAATGG+TGG - chr5_2:67154566-67154585 Msa0783270:intron 55.0%
GGAGGTGGTTACAATGGTGG+TGG - chr5_2:67154569-67154588 Msa0783270:intron 55.0%
!! GGTGGTTACAATGGTGGTGG+AGG - chr5_2:67154572-67154591 Msa0783270:intron 55.0%
CACGGTGGAGGTGGTTACAA+TGG - chr5_2:67154605-67154624 Msa0783270:intron 55.0%
GGTGGAGGTGGTTACAATGG+TGG - chr5_2:67154566-67154585 Msa0783270:intron 55.0%
GGAGGTGGTTACAATGGTGG+TGG - chr5_2:67154569-67154588 Msa0783270:intron 55.0%
!! GGTGGTTACAATGGTGGTGG+AGG - chr5_2:67154572-67154591 Msa0783270:intron 55.0%
GTCTGTTGCCGTGCAAACTG+AGG - chr5_2:67154661-67154680 Msa0783270:intron 55.0%
GGAGGTAGTTACAACCACGG+AGG - chr5_2:67154758-67154777 Msa0783270:intron 55.0%
GGTAGTTACAACCACGGAGG+AGG - chr5_2:67154761-67154780 Msa0783270:intron 55.0%
GGTGATAACTACCTCCTCCG+TGG + chr5_2:67154775-67154794 None:intergenic 55.0%
GGAGGTAGTTATCACCACGG+TGG - chr5_2:67154779-67154798 Msa0783270:intron 55.0%
GGTAGTTATCACCACGGTGG+AGG - chr5_2:67154782-67154801 Msa0783270:intron 55.0%
AGTTATCACCACGGTGGAGG+TGG - chr5_2:67154785-67154804 Msa0783270:intron 55.0%
GGTGGAGGTGGTTACAACCA+TGG - chr5_2:67154545-67154564 Msa0783270:intron 55.0%
GGAGGTGGTTACAACCATGG+TGG - chr5_2:67154548-67154567 Msa0783270:intron 55.0%
GGTGGTTACAACCATGGTGG+AGG - chr5_2:67154551-67154570 Msa0783270:intron 55.0%
! GGTTACAACCATGGTGGAGG+TGG - chr5_2:67154437-67154456 Msa0783270:CDS 55.0%
! AACCATGGTGGAGGTGGTCA+CGG - chr5_2:67154812-67154831 Msa0783270:intron 55.0%
!! TCACGGTGCTGACCAAACTG+AGG - chr5_2:67154862-67154881 Msa0783270:intron 55.0%
! GTCCCTAGCGGACATCACTG+AGG + chr5_2:67153691-67153710 None:intergenic 60.0%
GGTGGAGGTGGTTACAACGG+TGG - chr5_2:67154449-67154468 Msa0783270:CDS 60.0%
GGAGGTGGTTACAACGGTGG+TGG - chr5_2:67154452-67154471 Msa0783270:CDS 60.0%
! GGTGGTGGTTACAACCACGG+TGG - chr5_2:67154467-67154486 Msa0783270:CDS 60.0%
GGTGGTTACAACCACGGTGG+AGG - chr5_2:67154470-67154489 Msa0783270:CDS 60.0%
GGTTACAACCACGGTGGAGG+TGG - chr5_2:67154473-67154492 Msa0783270:CDS 60.0%
TGTGGTAACCACCTCCACCG+TGG + chr5_2:67154484-67154503 None:intergenic 60.0%
GGAGGTGGTTACCACAACGG+TGG - chr5_2:67154488-67154507 Msa0783270:intron 60.0%
GGTGGTTACCACAACGGTGG+TGG - chr5_2:67154491-67154510 Msa0783270:intron 60.0%
! GGTTACCACAACGGTGGTGG+TGG - chr5_2:67154494-67154513 Msa0783270:intron 60.0%
GGTAACCACCACCACCGTTG+TGG + chr5_2:67154502-67154521 None:intergenic 60.0%
! GGTGGTGGTTACCACAACGG+TGG - chr5_2:67154509-67154528 Msa0783270:intron 60.0%
GGTGGTTACCACAACGGTGG+CGG - chr5_2:67154491-67154510 Msa0783270:intron 60.0%
TGTATCCACCGCCACCGTTG+TGG + chr5_2:67154523-67154542 None:intergenic 60.0%
! GGTGGCGGTGGATACAATGG+TGG - chr5_2:67154527-67154546 Msa0783270:intron 60.0%
GGCGGTGGATACAATGGTGG+AGG - chr5_2:67154530-67154549 Msa0783270:intron 60.0%
!! AATGGTGGTGGAGGACACGG+TGG - chr5_2:67154581-67154600 Msa0783270:intron 60.0%
!! AATGGTGGTGGAGGTCACGG+TGG - chr5_2:67154623-67154642 Msa0783270:intron 60.0%
GGTTGTAACCACCTCCACCG+TGG + chr5_2:67154796-67154815 None:intergenic 60.0%
! GTCCCTAGCGGACATCACTG+AGG + chr5_2:67153691-67153710 None:intergenic 60.0%
GGTGGAGGTGGTTACAACGG+TGG - chr5_2:67154449-67154468 Msa0783270:CDS 60.0%
GGAGGTGGTTACAACGGTGG+TGG - chr5_2:67154452-67154471 Msa0783270:CDS 60.0%
! GGTGGTGGTTACAACCACGG+TGG - chr5_2:67154467-67154486 Msa0783270:CDS 60.0%
GGTGGTTACAACCACGGTGG+AGG - chr5_2:67154470-67154489 Msa0783270:CDS 60.0%
GGTTACAACCACGGTGGAGG+TGG - chr5_2:67154473-67154492 Msa0783270:CDS 60.0%
TGTGGTAACCACCTCCACCG+TGG + chr5_2:67154484-67154503 None:intergenic 60.0%
GGAGGTGGTTACCACAACGG+TGG - chr5_2:67154488-67154507 Msa0783270:intron 60.0%
GGTGGTTACCACAACGGTGG+TGG - chr5_2:67154491-67154510 Msa0783270:intron 60.0%
! GGTTACCACAACGGTGGTGG+TGG - chr5_2:67154494-67154513 Msa0783270:intron 60.0%
GGTAACCACCACCACCGTTG+TGG + chr5_2:67154502-67154521 None:intergenic 60.0%
! GGTGGTGGTTACCACAACGG+TGG - chr5_2:67154509-67154528 Msa0783270:intron 60.0%
GGTGGTTACCACAACGGTGG+CGG - chr5_2:67154491-67154510 Msa0783270:intron 60.0%
TGTATCCACCGCCACCGTTG+TGG + chr5_2:67154523-67154542 None:intergenic 60.0%
! GGTGGCGGTGGATACAATGG+TGG - chr5_2:67154527-67154546 Msa0783270:intron 60.0%
GGCGGTGGATACAATGGTGG+AGG - chr5_2:67154530-67154549 Msa0783270:intron 60.0%
!! AATGGTGGTGGAGGACACGG+TGG - chr5_2:67154581-67154600 Msa0783270:intron 60.0%
!! AATGGTGGTGGAGGTCACGG+TGG - chr5_2:67154623-67154642 Msa0783270:intron 60.0%
GGTTGTAACCACCTCCACCG+TGG + chr5_2:67154796-67154815 None:intergenic 60.0%
! GGTTACCACAACGGTGGCGG+TGG - chr5_2:67154515-67154534 Msa0783270:intron 65.0%
GGTGGAGGACACGGTGGTCA+CGG - chr5_2:67154587-67154606 Msa0783270:intron 65.0%
GGTGGAGGTCACGGTGGTCA+TGG - chr5_2:67154629-67154648 Msa0783270:intron 65.0%
GGAGGTCACGGTGGTCATGG+CGG - chr5_2:67154632-67154651 Msa0783270:intron 65.0%
CACCGTGACCACCTCCACCA+TGG + chr5_2:67154817-67154836 None:intergenic 65.0%
! CATGGTGGAGGTGGTCACGG+TGG - chr5_2:67154815-67154834 Msa0783270:intron 65.0%
GGAGGTGGTCACGGTGGACA+CGG - chr5_2:67154821-67154840 Msa0783270:intron 65.0%
GGACACGGTGGAGGTGGTCA+CGG - chr5_2:67154836-67154855 Msa0783270:intron 65.0%
GGAGGTGGTCACGGTGGTCA+CGG - chr5_2:67154845-67154864 Msa0783270:intron 65.0%
! GGTTACCACAACGGTGGCGG+TGG - chr5_2:67154515-67154534 Msa0783270:intron 65.0%
GGTGGAGGACACGGTGGTCA+CGG - chr5_2:67154587-67154606 Msa0783270:intron 65.0%
GGTGGAGGTCACGGTGGTCA+TGG - chr5_2:67154629-67154648 Msa0783270:intron 65.0%
GGAGGTCACGGTGGTCATGG+CGG - chr5_2:67154632-67154651 Msa0783270:intron 65.0%
CACCGTGACCACCTCCACCA+TGG + chr5_2:67154817-67154836 None:intergenic 65.0%
! CATGGTGGAGGTGGTCACGG+TGG - chr5_2:67154815-67154834 Msa0783270:intron 65.0%
GGAGGTGGTCACGGTGGACA+CGG - chr5_2:67154821-67154840 Msa0783270:intron 65.0%
GGACACGGTGGAGGTGGTCA+CGG - chr5_2:67154836-67154855 Msa0783270:intron 65.0%
GGAGGTGGTCACGGTGGTCA+CGG - chr5_2:67154845-67154864 Msa0783270:intron 65.0%
GGAGGACACGGTGGTCACGG+TGG - chr5_2:67154590-67154609 Msa0783270:intron 70.0%
GGACACGGTGGTCACGGTGG+AGG - chr5_2:67154593-67154612 Msa0783270:intron 70.0%
CACGGTGGTCACGGTGGAGG+TGG - chr5_2:67154596-67154615 Msa0783270:intron 70.0%
GGTGGTCACGGTGGACACGG+TGG - chr5_2:67154824-67154843 Msa0783270:intron 70.0%
GGTCACGGTGGACACGGTGG+AGG - chr5_2:67154827-67154846 Msa0783270:intron 70.0%
CACGGTGGACACGGTGGAGG+TGG - chr5_2:67154830-67154849 Msa0783270:intron 70.0%
CACGGTGGAGGTGGTCACGG+TGG - chr5_2:67154839-67154858 Msa0783270:intron 70.0%
GGAGGACACGGTGGTCACGG+TGG - chr5_2:67154590-67154609 Msa0783270:intron 70.0%
GGACACGGTGGTCACGGTGG+AGG - chr5_2:67154593-67154612 Msa0783270:intron 70.0%
CACGGTGGTCACGGTGGAGG+TGG - chr5_2:67154596-67154615 Msa0783270:intron 70.0%
GGTGGTCACGGTGGACACGG+TGG - chr5_2:67154824-67154843 Msa0783270:intron 70.0%
GGTCACGGTGGACACGGTGG+AGG - chr5_2:67154827-67154846 Msa0783270:intron 70.0%
CACGGTGGACACGGTGGAGG+TGG - chr5_2:67154830-67154849 Msa0783270:intron 70.0%
CACGGTGGAGGTGGTCACGG+TGG - chr5_2:67154839-67154858 Msa0783270:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 67153591 67155233 67153591 ID=Msa0783270;Name=Msa0783270
chr5_2 mRNA 67153591 67155233 67153591 ID=Msa0783270-mRNA-1;Parent=Msa0783270;Name=Msa0783270-mRNA-1;_AED=0.04;_eAED=0.04;_QI=42|0.66|0.5|1|0.33|0.25|4|332|212
chr5_2 exon 67153591 67154062 67153591 ID=Msa0783270-mRNA-1:exon:20154;Parent=Msa0783270-mRNA-1
chr5_2 exon 67154102 67154251 67154102 ID=Msa0783270-mRNA-1:exon:20153;Parent=Msa0783270-mRNA-1
chr5_2 exon 67154258 67154497 67154258 ID=Msa0783270-mRNA-1:exon:20152;Parent=Msa0783270-mRNA-1
chr5_2 exon 67155083 67155233 67155083 ID=Msa0783270-mRNA-1:exon:20151;Parent=Msa0783270-mRNA-1
chr5_2 five_prime_UTR 67155192 67155233 67155192 ID=Msa0783270-mRNA-1:five_prime_utr;Parent=Msa0783270-mRNA-1
chr5_2 CDS 67155083 67155191 67155083 ID=Msa0783270-mRNA-1:cds;Parent=Msa0783270-mRNA-1
chr5_2 CDS 67154258 67154497 67154258 ID=Msa0783270-mRNA-1:cds;Parent=Msa0783270-mRNA-1
chr5_2 CDS 67154102 67154251 67154102 ID=Msa0783270-mRNA-1:cds;Parent=Msa0783270-mRNA-1
chr5_2 CDS 67153923 67154062 67153923 ID=Msa0783270-mRNA-1:cds;Parent=Msa0783270-mRNA-1
chr5_2 three_prime_UTR 67153591 67153922 67153591 ID=Msa0783270-mRNA-1:three_prime_utr;Parent=Msa0783270-mRNA-1
Gene Sequence

>Msa0783270

ATGGATTCAAAAAAGGCAATCCTCATGCTAAGCCTCTTGGCTATGGCTCTTATTTCCTCAGTGATGTCCGCTAGGGACTTAACTGAAACTTCCACTGATGCTAAAAAGGAGGTTGTTGAAAAGACTAATGAAGTAAATGATGCCAAATATGGAGGCTACAACCATGGTGGTTATAACCACGGTGGTGGTTACAATGGTGGAGGTTATAACCACGGTGGAGGTTACAACCATGGTGGAGGTGGTTACAACGGTGGTGGTTACAACCACGGTGGAGGTGGTTACCACAACGGTGGTGGTGGTTACCACAACGGTGGCGGTGGATACAATGGTGGAGGTGGTTACAACCATGGTGGTTACAATGGTGGTGGAGGACACGGTGGTCACGGTGGAGGTGGTTACAATGGTGGTGGAGGTCACGGTGGTCATGGCGGTGCTGAGTCTGTTGCCGTGCAAACTGAGGAAAAGGCTAATGAAATGAATGATGCCAAATATGGTGGTGGTAGTTACAACCACGGAGGAGGTAGTTATCACCACGGTGGAGGTGGTTACAACCATGGTGGAGGTGGTCACGGTGGACACGGTGGAGGTGGTCACGGTGGTCACGGTGCTGACCAAACTGAGGACAAAACTCAAAATTAA

Protein sequence

>Msa0783270

MDSKKAILMLSLLAMALISSVMSARDLTETSTDAKKEVVEKTNEVNDAKYGGYNHGGYNHGGGYNGGGYNHGGGYNHGGGGYNGGGYNHGGGGYHNGGGGYHNGGGGYNGGGGYNHGGYNGGGGHGGHGGGGYNGGGGHGGHGGAESVAVQTEEKANEMNDAKYGGGSYNHGGGSYHHGGGGYNHGGGGHGGHGGGGHGGHGADQTEDKTQN*