AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0789130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0789130 MtrunA17_Chr3g0137771 97.036 641 19 0 1 641 1 641 0.0 1247
Msa0789130 MtrunA17_Chr1g0149351 66.512 645 208 4 1 640 1 642 0.0 845
Msa0789130 MtrunA17_Chr4g0063841 55.000 600 266 3 44 640 34 632 0.0 600
Msa0789130 MtrunA17_Chr4g0063861 52.185 389 185 1 252 640 2 389 1.34e-123 371
Msa0789130 MtrunA17_Chr4g0063861 23.902 410 247 11 178 555 6 382 1.33e-14 76.3
Msa0789130 MtrunA17_Chr4g0063851 47.619 189 87 4 44 232 37 213 1.01e-40 148
Msa0789130 MtrunA17_Chr2g0286991 25.316 553 356 15 71 579 11 550 2.56e-35 141
Msa0789130 MtrunA17_Chr2g0286991 27.384 409 232 12 226 606 127 498 1.20e-25 112
Msa0789130 MtrunA17_Chr2g0286991 27.574 272 172 3 172 419 305 575 2.29e-23 104
Msa0789130 MtrunA17_Chr4g0004901 27.565 497 302 17 137 605 180 646 1.42e-28 121
Msa0789130 MtrunA17_Chr4g0004901 25.460 326 208 8 174 499 367 657 1.88e-20 95.9
Msa0789130 MtrunA17_Chr4g0004901 26.199 271 164 6 135 404 383 618 1.20e-15 80.9
Msa0789130 MtrunA17_Chr1g0212071 27.411 394 256 12 69 445 18 398 1.59e-27 115
Msa0789130 MtrunA17_Chr1g0212071 23.724 333 222 5 304 634 95 397 2.30e-17 84.7
Msa0789130 MtrunA17_Chr1g0212071 28.352 261 153 7 140 372 145 399 2.19e-15 79.0
Msa0789130 MtrunA17_Chr7g0272131 26.450 431 277 12 169 571 190 608 6.54e-24 106
Msa0789130 MtrunA17_Chr7g0272131 25.316 474 263 17 205 623 94 531 6.32e-20 94.4
Msa0789130 MtrunA17_Chr7g0272131 23.473 311 207 5 174 459 350 654 2.78e-16 82.8
Msa0789130 MtrunA17_Chr8g0347711 26.984 378 238 10 66 423 10 369 7.27e-21 95.1
Msa0789130 MtrunA17_Chr1g0176031 30.769 247 154 9 343 585 107 340 2.03e-20 93.2
Msa0789130 MtrunA17_Chr1g0176031 27.119 236 159 5 142 372 89 316 7.33e-14 73.6
Msa0789130 MtrunA17_Chr1g0176031 26.016 246 163 6 172 407 90 326 9.67e-13 70.1
Msa0789130 MtrunA17_Chr1g0176031 22.924 301 173 7 213 484 79 349 6.76e-11 64.3
Msa0789130 MtrunA17_Chr3g0125671 25.926 216 107 3 196 411 111 273 2.19e-16 81.3
Msa0789130 MtrunA17_Chr1g0150971 24.494 445 226 15 174 580 327 699 2.20e-16 83.6
Msa0789130 MtrunA17_Chr4g0008501 22.488 418 280 10 178 574 158 552 3.61e-16 82.0
Msa0789130 MtrunA17_Chr4g0002671 23.404 564 336 20 68 571 3 530 4.48e-16 81.6
Msa0789130 MtrunA17_Chr1g0159531 23.404 282 147 4 196 461 99 327 6.28e-16 79.7
Msa0789130 MtrunA17_Chr1g0159531 31.507 146 73 3 141 262 128 270 6.63e-12 67.4
Msa0789130 MtrunA17_Chr1g0150991 24.276 449 273 15 173 577 162 587 1.04e-13 74.3
Msa0789130 MtrunA17_Chr4g0073771 30.726 179 108 5 227 403 102 266 1.15e-13 72.4
Msa0789130 MtrunA17_Chr5g0446541 22.355 501 299 14 178 633 149 604 2.74e-13 73.2
Msa0789130 MtrunA17_Chr1g0152951 23.978 367 199 12 225 580 137 434 8.44e-12 68.2
Msa0789130 MtrunA17_Chr3g0077831 24.866 374 212 13 200 514 192 555 5.21e-11 65.9
Msa0789130 MtrunA17_Chr4g0076081 21.678 429 280 11 178 564 133 547 8.97e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0789130 AT2G25490.1 56.563 640 265 6 1 640 1 627 0.0 676
Msa0789130 AT5G25350.1 51.788 643 288 6 1 641 1 623 0.0 608
Msa0789130 AT4G15475.1 28.007 582 378 19 71 641 11 562 8.54e-48 177
Msa0789130 AT4G15475.1 26.895 409 280 8 124 526 180 575 1.89e-31 130
Msa0789130 AT4G15475.1 28.840 319 214 7 143 460 282 588 2.99e-29 123
Msa0789130 AT5G27920.1 29.083 447 275 16 173 604 158 577 1.61e-28 121
Msa0789130 AT5G27920.1 26.351 296 185 7 200 495 338 600 4.48e-14 75.9
Msa0789130 AT5G23340.1 28.881 277 189 6 304 577 85 356 4.17e-25 108
Msa0789130 AT5G23340.1 25.266 376 257 12 69 433 8 370 3.50e-23 102
Msa0789130 AT5G23340.1 29.213 178 123 3 456 632 103 278 4.66e-14 75.1
Msa0789130 AT5G01720.1 23.232 396 249 6 176 548 241 604 1.73e-23 105
Msa0789130 AT5G01720.1 26.096 479 310 15 174 623 85 548 3.39e-19 92.4
Msa0789130 AT5G01720.1 22.593 270 175 6 173 415 315 577 6.89e-14 75.5
Msa0789130 AT1G21410.2 24.537 216 110 2 196 411 100 262 8.53e-16 80.1
Msa0789130 AT1G21410.1 24.537 216 110 2 196 411 100 262 8.53e-16 80.1
Msa0789130 AT1G77000.2 25.000 216 109 2 196 411 100 262 8.77e-16 79.7
Msa0789130 AT1G77000.1 25.000 216 109 2 196 411 100 262 8.77e-16 79.7
Msa0789130 AT1G55590.1 23.767 223 165 3 172 392 296 515 2.12e-14 77.0
Msa0789130 AT3G58530.1 26.866 268 159 7 343 607 109 342 3.59e-14 74.7
Msa0789130 AT3G58530.1 23.140 242 148 4 152 393 102 305 2.94e-12 68.9
Msa0789130 AT4G33210.1 24.200 500 279 18 160 616 351 793 5.27e-14 76.3
Msa0789130 AT3G07550.1 25.450 389 241 10 61 423 8 373 1.33e-13 73.6
Msa0789130 AT3G07550.2 25.450 389 241 10 61 423 8 373 1.33e-13 73.6
Msa0789130 AT1G47056.1 28.028 289 148 9 345 580 130 411 3.43e-13 72.8
Msa0789130 AT1G47056.1 33.523 176 100 8 117 286 244 408 1.79e-12 70.5
Msa0789130 AT1G47056.1 23.427 461 291 17 43 490 15 426 4.11e-12 69.3
Msa0789130 AT4G07400.1 38.211 123 73 3 160 282 344 463 9.40e-12 68.6
Msa0789130 AT1G80630.1 23.000 400 239 12 198 567 148 508 3.02e-11 67.0
Msa0789130 AT3G07550.3 24.936 389 216 11 61 423 8 346 3.11e-11 65.9
Msa0789130 AT2G06040.1 24.812 266 194 4 335 598 473 734 9.78e-11 65.5

Find 214 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGAAGTCTTTCACTCTT+TGG 0.100387 5_2:-76886759 Msa0789130:CDS
CCTGAATTTAGGTTTCTTTC+TGG 0.107587 5_2:-76885112 Msa0789130:three_prime_UTR
CAGATTTCCTTTCAATTATA+AGG 0.192891 5_2:+76885216 None:intergenic
GATTACTCACTAGCAGTTAT+TGG 0.193905 5_2:-76886406 Msa0789130:CDS
TGCCATAGGATTACCCAATT+TGG 0.212481 5_2:-76886103 Msa0789130:CDS
AGTTACTGGGTCCTGAATTT+AGG 0.217246 5_2:-76885123 Msa0789130:three_prime_UTR
TGACACCGGCAACCCCAAAT+TGG 0.224942 5_2:+76886089 None:intergenic
TCTGAAGTCTTTCACTCTTT+GGG 0.233451 5_2:-76886758 Msa0789130:CDS
CAATCTGGATGTACTTTCTT+TGG 0.236470 5_2:-76885573 Msa0789130:CDS
CTTGGAGTGCTAAACCTTAA+TGG 0.242738 5_2:-76885725 Msa0789130:CDS
TCGAAGCTTGGAGGGGAAAA+AGG 0.250888 5_2:-76886920 Msa0789130:CDS
TTTAGTCTTCTCTAGGGTTT+TGG 0.251026 5_2:-76884835 Msa0789130:three_prime_UTR
GTTGCTGCAGATTTCATTCT+TGG 0.268042 5_2:+76887002 None:intergenic
GCCATAGGATTACCCAATTT+GGG 0.271797 5_2:-76886102 Msa0789130:CDS
GTCCTTCAGGCAACCTTCTA+AGG 0.271825 5_2:+76887085 None:intergenic
TGAATAATGGTTTGTACTTT+TGG 0.273013 5_2:-76884635 Msa0789130:three_prime_UTR
TTATGAAAATTAATGAATAA+TGG 0.284559 5_2:-76884648 Msa0789130:three_prime_UTR
TGCCCTGGAGTAACAGATAT+TGG 0.295544 5_2:-76886259 Msa0789130:CDS
ACACAATCTCGAGGAGGATT+AGG 0.296188 5_2:-76886862 Msa0789130:CDS
AAACCTTAATGGTTGTAAAA+AGG 0.296888 5_2:-76885714 Msa0789130:CDS
TCAGTATGCAATAAAATATA+TGG 0.312924 5_2:+76884603 None:intergenic
ATCTGCAGCAACGCAAGTTC+TGG 0.313753 5_2:-76886991 Msa0789130:CDS
GACGGTGACAATCAAGAATT+TGG 0.313887 5_2:-76886961 Msa0789130:CDS
ATTGATACGGACCTTAGATT+TGG 0.325991 5_2:+76886529 None:intergenic
GATATCTATACCGCAGAATC+TGG 0.326092 5_2:-76885383 Msa0789130:three_prime_UTR
TTCACTGCTTCAGAGGTCTA+AGG 0.330025 5_2:-76885834 Msa0789130:CDS
CAACTAACGTCGCTCACAAT+TGG 0.335014 5_2:-76886286 Msa0789130:CDS
ATCTCTGAGAACATAGTTAC+TGG 0.341161 5_2:-76885137 Msa0789130:three_prime_UTR
TAATGGATGCTGAACATAAT+AGG 0.341815 5_2:+76886467 None:intergenic
AATTGTAGGCTCACAATTGA+TGG 0.346716 5_2:+76886133 None:intergenic
CTTCAGTGTCTTGAATTGAT+TGG 0.348304 5_2:-76885887 Msa0789130:CDS
TCAGAGGTCTAAGGCCAGTT+TGG 0.348388 5_2:-76885825 Msa0789130:CDS
TTCTTTGGCAGGTTGCTCAT+TGG 0.352209 5_2:-76885558 Msa0789130:CDS
ATTACCCAATTTGGGGTTGC+CGG 0.354313 5_2:-76886094 Msa0789130:CDS
TGGGGCCTTTAGTCTTCTCT+AGG 0.358115 5_2:-76884842 Msa0789130:three_prime_UTR
GAGAGAGAACCCTATGAGAT+AGG 0.359436 5_2:+76888070 None:intergenic
ATGTCACCGAGAAAGGATTC+TGG 0.362806 5_2:-76886336 Msa0789130:CDS
TAGATTAACATTACCCAAAC+TGG 0.367200 5_2:+76885811 None:intergenic
TTAGGGAAGCTTTCAATTCA+TGG 0.367968 5_2:-76886844 Msa0789130:CDS
AAGCTCCTATCTTGTCCTTC+AGG 0.374082 5_2:+76887072 None:intergenic
AATCCTTTCTCGGTGACATT+TGG 0.374117 5_2:+76886340 None:intergenic
CTAGCAGTTATTGGACAATA+TGG 0.374694 5_2:-76886397 Msa0789130:CDS
GTGGCAAAACCGATGCAAAA+TGG 0.376733 5_2:+76885064 None:intergenic
GCGGGTGTCTTCTTGTCTCT+TGG 0.378188 5_2:-76887246 Msa0789130:CDS
GAAAGTTGTGTCCAAATCTA+AGG 0.379486 5_2:-76886540 Msa0789130:CDS
CACCCGCCTCCTTCGGGTTA+AGG 0.382781 5_2:+76887262 None:intergenic
CTCACAATTGGGCTGTGCCC+TGG 0.383441 5_2:-76886274 Msa0789130:CDS
AAGTTGCATTGTTCGACTCT+TGG 0.384757 5_2:-76885743 Msa0789130:CDS
TCTAAAGTTCTCAGCTTTAC+CGG 0.389616 5_2:-76887930 Msa0789130:intron
CAGAGGTCTAAGGCCAGTTT+GGG 0.390240 5_2:-76885824 Msa0789130:CDS
AATGAAGGTCTACATGCTAT+TGG 0.392573 5_2:-76886562 Msa0789130:CDS
CTTCCAAATGTCACCGAGAA+AGG 0.393704 5_2:-76886343 Msa0789130:CDS
CATCAGTTATCGGTGGGTCT+TGG 0.393846 5_2:-76885305 Msa0789130:three_prime_UTR
GCCCTGGAGTAACAGATATT+GGG 0.394824 5_2:-76886258 Msa0789130:CDS
AGAAGACACCCGCCTCCTTC+GGG 0.396078 5_2:+76887256 None:intergenic
AAGAAGACACCCGCCTCCTT+CGG 0.396120 5_2:+76887255 None:intergenic
GCCTCTTTGAGATCCTTAGA+AGG 0.399791 5_2:-76887098 Msa0789130:CDS
CTGTCCTGGAGTTCGTGATC+AGG 0.403623 5_2:-76886500 Msa0789130:CDS
TTTAGGTTTCTTTCTGGTGT+TGG 0.405673 5_2:-76885106 Msa0789130:three_prime_UTR
CACAATCTCGAGGAGGATTA+GGG 0.405866 5_2:-76886861 Msa0789130:CDS
CTGGATGTACTTTCTTTGGC+AGG 0.406723 5_2:-76885569 Msa0789130:CDS
CTTGAATTGATTGGACTTGA+GGG 0.412726 5_2:-76885878 Msa0789130:CDS
CCAACACTGATAATAAAATC+TGG 0.413025 5_2:+76885348 None:intergenic
ATCAATTGTGAGCCTACAAT+TGG 0.415296 5_2:-76886131 Msa0789130:CDS
TACCAACTCCAGGGCAGTTA+CGG 0.416240 5_2:+76885948 None:intergenic
AAAATTGAAGGCTCTTACTC+TGG 0.417528 5_2:-76886050 Msa0789130:CDS
TATGGCACTCTTCCAATTGT+AGG 0.418212 5_2:+76886119 None:intergenic
CACAATTGATGGAGCAGCCT+TGG 0.432002 5_2:+76886144 None:intergenic
AACTAACGTCGCTCACAATT+GGG 0.438220 5_2:-76886285 Msa0789130:CDS
ATTGACAGTTCAGAGTTGTA+TGG 0.439830 5_2:-76884862 Msa0789130:three_prime_UTR
CTTACTCTGGTAAGCTGCTA+CGG 0.439956 5_2:-76886037 Msa0789130:CDS
ACAAGCTTGTGGAACATCTC+TGG 0.440119 5_2:-76885439 Msa0789130:CDS
GTTCGTGATCAGGGAATTGC+TGG 0.441466 5_2:-76886490 Msa0789130:CDS
CATCACCCAGAATCCTTTCT+CGG 0.442853 5_2:+76886330 None:intergenic
CAACCACTCTGGACAAACTT+TGG 0.444390 5_2:+76885003 None:intergenic
GGCTTGATCGAGATTGCTAA+TGG 0.449362 5_2:-76886712 Msa0789130:CDS
AAAAGCAGCATCCCGTCAAC+AGG 0.451130 5_2:+76885173 None:intergenic
TGCATCGGTGATTGCACACT+CGG 0.454668 5_2:+76885628 None:intergenic
AATCAAGAATTTGGTGATGT+AGG 0.455498 5_2:-76886952 Msa0789130:CDS
ATCGATAACTCAGTCAGATT+CGG 0.457316 5_2:+76886607 None:intergenic
ACATCAGTCAAGGCACGATC+TGG 0.458394 5_2:+76886814 None:intergenic
AAACCGTGGTGCAAAATTGA+AGG 0.459034 5_2:-76886062 Msa0789130:CDS
TGAACAGGACTCCACGAGTA+AGG 0.461905 5_2:+76885594 None:intergenic
GAGTGTGCAATCACCGATGC+AGG 0.462800 5_2:-76885626 Msa0789130:CDS
GACACCGGCAACCCCAAATT+GGG 0.463002 5_2:+76886090 None:intergenic
CAGGTTTCCTTATAATTGAA+AGG 0.463848 5_2:-76885223 Msa0789130:three_prime_UTR
ATCTCAAAGAGGCATTCATC+AGG 0.464081 5_2:+76887108 None:intergenic
GATCAAGCCTTTGTCACTAA+TGG 0.465229 5_2:+76886726 None:intergenic
GATAACAAAATCACATAAGC+TGG 0.467001 5_2:+76884894 None:intergenic
TCGTGGAGTCCTGTTCAATC+TGG 0.467985 5_2:-76885588 Msa0789130:CDS
GATAATAAAATCTGGAGAGC+AGG 0.468463 5_2:+76885356 None:intergenic
TGTTCTGTACGCGATGTTTG+TGG 0.469452 5_2:-76884948 Msa0789130:three_prime_UTR
TATTGGACAATATGGCTTTG+TGG 0.469637 5_2:-76886389 Msa0789130:CDS
GGTTGCCTGAAGGACAAGAT+AGG 0.472680 5_2:-76887077 Msa0789130:CDS
AGCCCAATATCTGTTACTCC+AGG 0.474848 5_2:+76886256 None:intergenic
GGATTCTGGGTGATGGGTAA+TGG 0.476172 5_2:-76886322 Msa0789130:CDS
AATGTCCCATTTGACTTCAG+TGG 0.477222 5_2:-76887177 Msa0789130:CDS
TTTCTCCACTGAAGTCAAAT+GGG 0.478494 5_2:+76887172 None:intergenic
TAGAAGCGTGAGCCAGCGCT+TGG 0.480253 5_2:+76887035 None:intergenic
CATAATATAACTAGTACAAA+GGG 0.483698 5_2:+76884666 None:intergenic
TTATCAATCCGTAACTGCCC+TGG 0.487556 5_2:-76885956 Msa0789130:CDS
TTGGGTAATGTTAATCTAAG+TGG 0.488310 5_2:-76885806 Msa0789130:CDS
AAAGTACATCCAGATTGAAC+AGG 0.488581 5_2:+76885579 None:intergenic
GATTGAACAACTGTATGCTC+TGG 0.488817 5_2:+76885256 None:intergenic
CTATCTTTCTCGAAGCTTGG+AGG 0.490244 5_2:-76886929 Msa0789130:CDS
AGGCTATCTTTCTCGAAGCT+TGG 0.490305 5_2:-76886932 Msa0789130:CDS
GTCTGTAAGCATATTCTTGA+CGG 0.492252 5_2:+76887223 None:intergenic
TTGACAGTTCAGAGTTGTAT+GGG 0.494960 5_2:-76884861 Msa0789130:three_prime_UTR
CAGAAGAAACCTCAAAGAAG+AGG 0.495710 5_2:+76888004 None:intergenic
CCAGAAAGAAACCTAAATTC+AGG 0.498677 5_2:+76885112 None:intergenic
TCATAATATAACTAGTACAA+AGG 0.502352 5_2:+76884665 None:intergenic
GGTCTCAAGGCAGTTGCTCA+TGG 0.502544 5_2:-76886790 Msa0789130:CDS
CCCCAAATTGGGTAATCCTA+TGG 0.504344 5_2:+76886101 None:intergenic
TGTCACCGAGAAAGGATTCT+GGG 0.505645 5_2:-76886335 Msa0789130:CDS
ACGTTAGTTGCTGCAGTGCA+TGG 0.507163 5_2:+76886299 None:intergenic
AAAGCCTTGTCAGAAATTGT+TGG 0.508372 5_2:+76886652 None:intergenic
ATCCGTAACTGCCCTGGAGT+TGG 0.514000 5_2:-76885950 Msa0789130:CDS
CGAGAAAGGATTCTGGGTGA+TGG 0.515420 5_2:-76886329 Msa0789130:CDS
TACCTTAACCCGAAGGAGGC+GGG 0.516641 5_2:-76887264 Msa0789130:CDS
GTGCTTCTGTATCCAAGCGC+TGG 0.517996 5_2:-76887047 Msa0789130:CDS
CTTTCTCGGTGACATTTGGA+AGG 0.518084 5_2:+76886344 None:intergenic
AGAGTAAAATTACCAACTCC+AGG 0.518751 5_2:+76885938 None:intergenic
ATTCTGCGGTATAGATATCA+AGG 0.518800 5_2:+76885387 None:intergenic
GGGATTTCTGCCCTTACTCG+TGG 0.522818 5_2:-76885605 Msa0789130:CDS
GATATTGGGCTTGAAGCTGT+AGG 0.528983 5_2:-76886244 Msa0789130:CDS
TGGGTTAACACCAACCACTC+TGG 0.534760 5_2:+76884992 None:intergenic
CAAAGTTTGTCCAGAGTGGT+TGG 0.534976 5_2:-76885002 Msa0789130:three_prime_UTR
GGTTTATTTCACTGCTTCAG+AGG 0.535734 5_2:-76885841 Msa0789130:CDS
AATGTATCAGAACATGAAAG+TGG 0.536150 5_2:+76888217 None:intergenic
TGAAGCAGTGAAATAAACCC+TGG 0.539869 5_2:+76885845 None:intergenic
AGACTAGCTGCCATTGCTGT+TGG 0.540189 5_2:-76886886 Msa0789130:CDS
TGTCCTAGCATCGGTAATGA+AGG 0.540249 5_2:-76886577 Msa0789130:CDS
AGAGAGAACCCTATGAGATA+GGG 0.542524 5_2:+76888071 None:intergenic
TTGGGTACATTGAGTGTGAC+AGG 0.543357 5_2:+76888185 None:intergenic
TTGGGTCCATCAGTTATCGG+TGG 0.543420 5_2:-76885312 Msa0789130:three_prime_UTR
TGTGACATCCTCTTCTGAGC+AGG 0.543791 5_2:-76885413 Msa0789130:exon
TATCTTTCTCGAAGCTTGGA+GGG 0.544169 5_2:-76886928 Msa0789130:CDS
AAATTGTTGGCAACTTGCAT+AGG 0.545096 5_2:+76886665 None:intergenic
ATATCTATACCGCAGAATCT+GGG 0.545719 5_2:-76885382 Msa0789130:three_prime_UTR
TGGGTCCATCAGTTATCGGT+GGG 0.548492 5_2:-76885311 Msa0789130:three_prime_UTR
GTCTGACATGGAGATACTGC+TGG 0.549571 5_2:+76885989 None:intergenic
GGGCTTGAAGCTGTAGGGAA+GGG 0.551029 5_2:-76886238 Msa0789130:CDS
GGGGCCTTTAGTCTTCTCTA+GGG 0.551404 5_2:-76884841 Msa0789130:three_prime_UTR
CAACGCAAGTTCTGGAAACA+AGG 0.552191 5_2:-76886983 Msa0789130:CDS
TCTTGAATTGATTGGACTTG+AGG 0.552643 5_2:-76885879 Msa0789130:CDS
TTACTCTGGTAAGCTGCTAC+GGG 0.552800 5_2:-76886036 Msa0789130:CDS
TACAGACTGCTGTGAAAACA+CGG 0.555367 5_2:+76885026 None:intergenic
TGTCCTGGAGTTCGTGATCA+GGG 0.555690 5_2:-76886499 Msa0789130:CDS
ATCTTTCTCGAAGCTTGGAG+GGG 0.555765 5_2:-76886927 Msa0789130:CDS
ATATTGGGCTTGAAGCTGTA+GGG 0.555936 5_2:-76886243 Msa0789130:CDS
GTACCTTAACCCGAAGGAGG+CGG 0.556569 5_2:-76887265 Msa0789130:CDS
GTGCATTTCTGTCAGACAAT+GGG 0.557102 5_2:-76886180 Msa0789130:CDS
TAATGGTTGTCATCAGATAG+AGG 0.558248 5_2:-76886695 Msa0789130:CDS
AACACGGGAACAACGAAACA+TGG 0.559424 5_2:+76885042 None:intergenic
CTTGACTGATGTAGGTCTCA+AGG 0.565875 5_2:-76886803 Msa0789130:CDS
AATTCAAGACACTGAAGCAT+AGG 0.567525 5_2:+76885893 None:intergenic
GAGTGAAAGACTTCAGAGAA+GGG 0.568710 5_2:+76886764 None:intergenic
GAGAAAGGATTCTGGGTGAT+GGG 0.569849 5_2:-76886328 Msa0789130:CDS
TGGGCTTGAAGCTGTAGGGA+AGG 0.570259 5_2:-76886239 Msa0789130:CDS
AGAAGAAACCTCAAAGAAGA+GGG 0.570422 5_2:+76888005 None:intergenic
GTTAAGGATTGTCAAAGGTG+TGG 0.573378 5_2:+76888131 None:intergenic
TGCATCAATCTGACAGATGT+AGG 0.573775 5_2:-76885782 Msa0789130:CDS
ATTCCCTGATCACGAACTCC+AGG 0.574036 5_2:+76886496 None:intergenic
ATGTATCAGAACATGAAAGT+GGG 0.574854 5_2:+76888218 None:intergenic
CAAGACCCACCGATAACTGA+TGG 0.577463 5_2:+76885306 None:intergenic
AGAGTGAAAGACTTCAGAGA+AGG 0.580309 5_2:+76886763 None:intergenic
TGTGCATTTCTGTCAGACAA+TGG 0.584416 5_2:-76886181 Msa0789130:CDS
AAATTGGGTGATTCCCTCGA+GGG 0.585090 5_2:-76885506 Msa0789130:CDS
ATTGTCTGCAATTGCTGTCA+AGG 0.587916 5_2:+76885679 None:intergenic
AGATTGTGTGCCAACAGCAA+TGG 0.591886 5_2:+76886876 None:intergenic
GAACAGGACTCCACGAGTAA+GGG 0.593363 5_2:+76885595 None:intergenic
TTTCTCGGTGACATTTGGAA+GGG 0.597962 5_2:+76886345 None:intergenic
GTTGCTACCATTAGTGACAA+AGG 0.599127 5_2:-76886733 Msa0789130:CDS
AAAACCCTAGAGAAGACTAA+AGG 0.599294 5_2:+76884837 None:intergenic
CAAGGCTACCTGCTCAGAAG+AGG 0.600220 5_2:+76885405 None:intergenic
GATCGTGCCTTGACTGATGT+AGG 0.605270 5_2:-76886811 Msa0789130:CDS
CCATAGGATTACCCAATTTG+GGG 0.605745 5_2:-76886101 Msa0789130:CDS
GTTGCCAACAATTTCTGACA+AGG 0.608947 5_2:-76886656 Msa0789130:CDS
CATTACATAACATAAGATAG+AGG 0.609972 5_2:+76884702 None:intergenic
AAGGGCAGAAATCCCTGCAT+CGG 0.611779 5_2:+76885613 None:intergenic
ATTTCTGTCAGACAATGGGC+TGG 0.612009 5_2:-76886176 Msa0789130:CDS
TGAAGGTTAAGGATTGTCAA+AGG 0.615682 5_2:+76888126 None:intergenic
TACAATTGGAAGAGTGCCAT+AGG 0.616497 5_2:-76886117 Msa0789130:CDS
CTTGAGGGAATAACAGACCC+AGG 0.616547 5_2:-76885863 Msa0789130:CDS
ATCCTTAGAAGGTTGCCTGA+AGG 0.616856 5_2:-76887087 Msa0789130:CDS
ACGCACAGTTAACAAGCTTG+TGG 0.617009 5_2:-76885450 Msa0789130:CDS
ATAGAGTCATGTCCTAGCAT+CGG 0.621372 5_2:-76886586 Msa0789130:CDS
CGAACAATGCAACTTGACCA+TGG 0.623330 5_2:+76885751 None:intergenic
GAAGCAGTGAAATAAACCCT+GGG 0.624828 5_2:+76885846 None:intergenic
ACCACGGTTTAAAATGACAC+CGG 0.630252 5_2:+76886075 None:intergenic
ACCTTCTAAGGATCTCAAAG+AGG 0.631936 5_2:+76887097 None:intergenic
AGTGTGCAATCACCGATGCA+GGG 0.633058 5_2:-76885625 Msa0789130:CDS
TCTCTGAGAACATAGTTACT+GGG 0.633267 5_2:-76885136 Msa0789130:three_prime_UTR
GCCCAATATCTGTTACTCCA+GGG 0.638985 5_2:+76886257 None:intergenic
AATGACGAAATTGTCTGACA+TGG 0.645410 5_2:+76885977 None:intergenic
GTCGATGTACCTTAACCCGA+AGG 0.647280 5_2:-76887271 Msa0789130:CDS
CTTGAGACCTACATCAGTCA+AGG 0.649066 5_2:+76886804 None:intergenic
TGTATCAGAACATGAAAGTG+GGG 0.652634 5_2:+76888219 None:intergenic
AGACCTTCATTACCGATGCT+AGG 0.654284 5_2:+76886574 None:intergenic
AGCAGGCTACCCAGATTCTG+CGG 0.661774 5_2:+76885373 None:intergenic
GAGTAAAATTACCAACTCCA+GGG 0.662405 5_2:+76885939 None:intergenic
GCAAGTTCTGGAAACAAGGA+CGG 0.662723 5_2:-76886979 Msa0789130:CDS
GCATAGGACAGAGCTTCCCA+AGG 0.666207 5_2:+76885909 None:intergenic
TGACAGTTCAGAGTTGTATG+GGG 0.667130 5_2:-76884860 Msa0789130:three_prime_UTR
GTACCAAAGTTTGTCCAGAG+TGG 0.668797 5_2:-76885006 Msa0789130:three_prime_UTR
TTGAGGGAATAACAGACCCA+GGG 0.669478 5_2:-76885862 Msa0789130:CDS
GATGTACCTTAACCCGAAGG+AGG 0.670839 5_2:-76887268 Msa0789130:CDS
GCTGTTGGCACACAATCTCG+AGG 0.687326 5_2:-76886871 Msa0789130:CDS
AAAATTGGGTGATTCCCTCG+AGG 0.689356 5_2:-76885507 Msa0789130:CDS
ACAGACTGCTGTGAAAACAC+GGG 0.689596 5_2:+76885027 None:intergenic
ACGGGAACAACGAAACATGG+TGG 0.725413 5_2:+76885045 None:intergenic
GTTGGCACACAATCTCGAGG+AGG 0.726557 5_2:-76886868 Msa0789130:CDS
TGGGCTGGTATCGTTCACCA+AGG 0.727978 5_2:-76886161 Msa0789130:CDS
ATAGATCAAAGAACAACACA+AGG 0.730025 5_2:+76887960 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGAAAATTAATGAATAA+TGG - chr5_2:76888192-76888211 Msa0789130:five_prime_UTR 10.0%
!!! TATGATTTCTATTTTAGTTT+TGG - chr5_2:76885074-76885093 Msa0789130:three_prime_UTR 15.0%
!!! TTTTGAGATAGTATATAATT+TGG - chr5_2:76885157-76885176 Msa0789130:three_prime_UTR 15.0%
!!! GTCAATTTAATTTTTTTGTT+TGG - chr5_2:76885401-76885420 Msa0789130:exon 15.0%
!!! GGTAATTAAATCTACTTTTT+TGG - chr5_2:76885095-76885114 Msa0789130:three_prime_UTR 20.0%
!!! AATTAAATCTACTTTTTTGG+TGG - chr5_2:76885098-76885117 Msa0789130:three_prime_UTR 20.0%
!!! ACGATAAAAGATAATTTTGT+TGG - chr5_2:76885212-76885231 Msa0789130:three_prime_UTR 20.0%
!!! TAGTTGTTATATGTATTTTG+TGG - chr5_2:76885235-76885254 Msa0789130:three_prime_UTR 20.0%
!!! AGTTGTTATATGTATTTTGT+GGG - chr5_2:76885236-76885255 Msa0789130:three_prime_UTR 20.0%
!! TTATATAATACTCATTCATG+TGG - chr5_2:76885448-76885467 Msa0789130:CDS 20.0%
!!! AATCTGTTGAAAGTTTTTTT+TGG - chr5_2:76887641-76887660 Msa0789130:intron 20.0%
!! CATAATATAACTAGTACAAA+GGG + chr5_2:76888177-76888196 None:intergenic 20.0%
!! TCATAATATAACTAGTACAA+AGG + chr5_2:76888178-76888197 None:intergenic 20.0%
!! TCAGTATGCAATAAAATATA+TGG + chr5_2:76888240-76888259 None:intergenic 20.0%
! TGAAAAAAGAAGAGATTGTT+GGG + chr5_2:76884676-76884695 None:intergenic 25.0%
! AAAAATGAAAGTGAAGGTTA+AGG + chr5_2:76884728-76884747 None:intergenic 25.0%
! AGAGAAAAAAATGAAAGTGA+AGG + chr5_2:76884734-76884753 None:intergenic 25.0%
! TTCATGTTTCATCTGATTAT+TGG - chr5_2:76884949-76884968 Msa0789130:three_prime_UTR 25.0%
!! ATATGTCTAGTTATGTGTTT+TGG - chr5_2:76885379-76885398 Msa0789130:three_prime_UTR 25.0%
!!! AGGACAGTTTTTAATTGATA+CGG + chr5_2:76886327-76886346 None:intergenic 25.0%
!!! TGTCAGCTTTTTTAGAATAA+TGG + chr5_2:76886393-76886412 None:intergenic 25.0%
! AAACCTTAATGGTTGTAAAA+AGG - chr5_2:76887126-76887145 Msa0789130:CDS 25.0%
!!! TTGTCTGCTTTGAAAAAATT+GGG - chr5_2:76887319-76887338 Msa0789130:intron 25.0%
!! TTTTATATTTAATCCCTCGA+GGG + chr5_2:76887350-76887369 None:intergenic 25.0%
!! TTTTTATATTTAATCCCTCG+AGG + chr5_2:76887351-76887370 None:intergenic 25.0%
!!! TGTTCAATCTTTATTTTTGC+AGG - chr5_2:76887598-76887617 Msa0789130:intron 25.0%
! CAGATTTCCTTTCAATTATA+AGG + chr5_2:76887627-76887646 None:intergenic 25.0%
!!! CTTATGTGATTTTGTTATCT+TGG - chr5_2:76887950-76887969 Msa0789130:exon 25.0%
! AAGAAGCCTAAAAAAAACTA+GGG + chr5_2:76888095-76888114 None:intergenic 25.0%
! AAAGAAGCCTAAAAAAAACT+AGG + chr5_2:76888096-76888115 None:intergenic 25.0%
! CATTACATAACATAAGATAG+AGG + chr5_2:76888141-76888160 None:intergenic 25.0%
!!! TGAATAATGGTTTGTACTTT+TGG - chr5_2:76888205-76888224 Msa0789130:five_prime_UTR 25.0%
ATGTATCAGAACATGAAAGT+GGG + chr5_2:76884625-76884644 None:intergenic 30.0%
AATGTATCAGAACATGAAAG+TGG + chr5_2:76884626-76884645 None:intergenic 30.0%
GTGAAAAAAGAAGAGATTGT+TGG + chr5_2:76884677-76884696 None:intergenic 30.0%
!! TCAAAGGTGTGGTTTTTATT+GGG + chr5_2:76884701-76884720 None:intergenic 30.0%
TGAGATAGGGCAAAAAAAAA+GGG + chr5_2:76884759-76884778 None:intergenic 30.0%
ATGAGATAGGGCAAAAAAAA+AGG + chr5_2:76884760-76884779 None:intergenic 30.0%
!!! TTTTTTTTGCCCTATCTCAT+AGG - chr5_2:76884760-76884779 Msa0789130:three_prime_UTR 30.0%
!!! TTTTTTTGCCCTATCTCATA+GGG - chr5_2:76884761-76884780 Msa0789130:three_prime_UTR 30.0%
ATAGATCAAAGAACAACACA+AGG + chr5_2:76884883-76884902 None:intergenic 30.0%
TGCTCAAAATTCATTTGTGT+TGG - chr5_2:76885347-76885366 Msa0789130:three_prime_UTR 30.0%
!! AATCAAGAATTTGGTGATGT+AGG - chr5_2:76885888-76885907 Msa0789130:CDS 30.0%
GTATCAATTAAAAACTGTCC+TGG - chr5_2:76886326-76886345 Msa0789130:CDS 30.0%
! TAATGGATGCTGAACATAAT+AGG + chr5_2:76886376-76886395 None:intergenic 30.0%
! AGCTGAAAGTTTTTCACATT+TGG + chr5_2:76886632-76886651 None:intergenic 30.0%
TAGATTAACATTACCCAAAC+TGG + chr5_2:76887032-76887051 None:intergenic 30.0%
TTGGGTAATGTTAATCTAAG+TGG - chr5_2:76887034-76887053 Msa0789130:CDS 30.0%
CTTAATGGTTGTAAAAAGGT+CGG - chr5_2:76887130-76887149 Msa0789130:CDS 30.0%
TTAATGGTTGTAAAAAGGTC+GGG - chr5_2:76887131-76887150 Msa0789130:CDS 30.0%
!! CTTGTCTGCTTTGAAAAAAT+TGG - chr5_2:76887318-76887337 Msa0789130:intron 30.0%
CCAACACTGATAATAAAATC+TGG + chr5_2:76887495-76887514 None:intergenic 30.0%
! CCAGATTTTATTATCAGTGT+TGG - chr5_2:76887492-76887511 Msa0789130:intron 30.0%
CAGGTTTCCTTATAATTGAA+AGG - chr5_2:76887617-76887636 Msa0789130:intron 30.0%
GTTCAAATACGCGAAAAATT+GGG + chr5_2:76887870-76887889 None:intergenic 30.0%
AGTTCAAATACGCGAAAAAT+TGG + chr5_2:76887871-76887890 None:intergenic 30.0%
GATAACAAAATCACATAAGC+TGG + chr5_2:76887949-76887968 None:intergenic 30.0%
AAAAAAACAATCCTTCCCAA+GGG + chr5_2:76888064-76888083 None:intergenic 30.0%
TGTATCAGAACATGAAAGTG+GGG + chr5_2:76884624-76884643 None:intergenic 35.0%
!! GTCAAAGGTGTGGTTTTTAT+TGG + chr5_2:76884702-76884721 None:intergenic 35.0%
TGAAGGTTAAGGATTGTCAA+AGG + chr5_2:76884717-76884736 None:intergenic 35.0%
! TTCTTTTTCCCTCTTCTTTG+AGG - chr5_2:76884827-76884846 Msa0789130:three_prime_UTR 35.0%
AGAAGAAACCTCAAAGAAGA+GGG + chr5_2:76884838-76884857 None:intergenic 35.0%
! TCTAAAGTTCTCAGCTTTAC+CGG - chr5_2:76884910-76884929 Msa0789130:three_prime_UTR 35.0%
!! TTACCGGTAAGCTTTTGATT+TGG - chr5_2:76884926-76884945 Msa0789130:three_prime_UTR 35.0%
GAACCAAATCAAAAGCTTAC+CGG + chr5_2:76884932-76884951 None:intergenic 35.0%
!! ACTCATTCATGTGGTTTTAC+TGG - chr5_2:76885457-76885476 Msa0789130:CDS 35.0%
TGAGAAATCAAACACACACA+AGG + chr5_2:76885523-76885542 None:intergenic 35.0%
! TTGTGTGTGTTTGATTTCTC+AGG - chr5_2:76885522-76885541 Msa0789130:CDS 35.0%
! GTGATGATTTTTGTACTGGA+AGG - chr5_2:76885547-76885566 Msa0789130:CDS 35.0%
GTCTGTAAGCATATTCTTGA+CGG + chr5_2:76885620-76885639 None:intergenic 35.0%
TTTCTCCACTGAAGTCAAAT+GGG + chr5_2:76885671-76885690 None:intergenic 35.0%
! TTTTCTCCACTGAAGTCAAA+TGG + chr5_2:76885672-76885691 None:intergenic 35.0%
TTGACTTCAGTGGAGAAAAA+TGG - chr5_2:76885673-76885692 Msa0789130:CDS 35.0%
TTAGGGAAGCTTTCAATTCA+TGG - chr5_2:76885996-76886015 Msa0789130:CDS 35.0%
! TCTGAAGTCTTTCACTCTTT+GGG - chr5_2:76886082-76886101 Msa0789130:CDS 35.0%
TAATGGTTGTCATCAGATAG+AGG - chr5_2:76886145-76886164 Msa0789130:CDS 35.0%
AAATTGTTGGCAACTTGCAT+AGG + chr5_2:76886178-76886197 None:intergenic 35.0%
! AAAGCCTTGTCAGAAATTGT+TGG + chr5_2:76886191-76886210 None:intergenic 35.0%
ATCGATAACTCAGTCAGATT+CGG + chr5_2:76886236-76886255 None:intergenic 35.0%
AATGAAGGTCTACATGCTAT+TGG - chr5_2:76886278-76886297 Msa0789130:CDS 35.0%
GAAAGTTGTGTCCAAATCTA+AGG - chr5_2:76886300-76886319 Msa0789130:CDS 35.0%
ATTGATACGGACCTTAGATT+TGG + chr5_2:76886314-76886333 None:intergenic 35.0%
GATTACTCACTAGCAGTTAT+TGG - chr5_2:76886434-76886453 Msa0789130:CDS 35.0%
CTAGCAGTTATTGGACAATA+TGG - chr5_2:76886443-76886462 Msa0789130:CDS 35.0%
! TATTGGACAATATGGCTTTG+TGG - chr5_2:76886451-76886470 Msa0789130:CDS 35.0%
TGAAAAACTTTCAGCTTCGT+AGG - chr5_2:76886636-76886655 Msa0789130:CDS 35.0%
AATTGTAGGCTCACAATTGA+TGG + chr5_2:76886710-76886729 None:intergenic 35.0%
ATCAATTGTGAGCCTACAAT+TGG - chr5_2:76886709-76886728 Msa0789130:CDS 35.0%
AAAATTGAAGGCTCTTACTC+TGG - chr5_2:76886790-76886809 Msa0789130:CDS 35.0%
AATGACGAAATTGTCTGACA+TGG + chr5_2:76886866-76886885 None:intergenic 35.0%
GAGTAAAATTACCAACTCCA+GGG + chr5_2:76886904-76886923 None:intergenic 35.0%
AGAGTAAAATTACCAACTCC+AGG + chr5_2:76886905-76886924 None:intergenic 35.0%
! AATTTTACTCTCAACGTCCT+TGG - chr5_2:76886914-76886933 Msa0789130:CDS 35.0%
! ATTTTACTCTCAACGTCCTT+GGG - chr5_2:76886915-76886934 Msa0789130:CDS 35.0%
AATTCAAGACACTGAAGCAT+AGG + chr5_2:76886950-76886969 None:intergenic 35.0%
CTTCAGTGTCTTGAATTGAT+TGG - chr5_2:76886953-76886972 Msa0789130:CDS 35.0%
TCTTGAATTGATTGGACTTG+AGG - chr5_2:76886961-76886980 Msa0789130:CDS 35.0%
CTTGAATTGATTGGACTTGA+GGG - chr5_2:76886962-76886981 Msa0789130:CDS 35.0%
! CGACCTTTTTACAACCATTA+AGG + chr5_2:76887132-76887151 None:intergenic 35.0%
TAATGGTTGTAAAAAGGTCG+GGG - chr5_2:76887132-76887151 Msa0789130:CDS 35.0%
AAAGTACATCCAGATTGAAC+AGG + chr5_2:76887264-76887283 None:intergenic 35.0%
CAATCTGGATGTACTTTCTT+TGG - chr5_2:76887267-76887286 Msa0789130:CDS 35.0%
ATTCTGCGGTATAGATATCA+AGG + chr5_2:76887456-76887475 None:intergenic 35.0%
ATATCTATACCGCAGAATCT+GGG - chr5_2:76887458-76887477 Msa0789130:intron 35.0%
GATAATAAAATCTGGAGAGC+AGG + chr5_2:76887487-76887506 None:intergenic 35.0%
!!! TTTTATTATCAGTGTTGGCG+AGG - chr5_2:76887497-76887516 Msa0789130:intron 35.0%
!!! TTTTTGGGTCCATCAGTTAT+CGG - chr5_2:76887525-76887544 Msa0789130:intron 35.0%
!!! TTTTTTTGGCATCCTGTTGA+CGG - chr5_2:76887655-76887674 Msa0789130:intron 35.0%
! ATCTCTGAGAACATAGTTAC+TGG - chr5_2:76887703-76887722 Msa0789130:intron 35.0%
! TCTCTGAGAACATAGTTACT+GGG - chr5_2:76887704-76887723 Msa0789130:intron 35.0%
CCAGAAAGAAACCTAAATTC+AGG + chr5_2:76887731-76887750 None:intergenic 35.0%
! CCTGAATTTAGGTTTCTTTC+TGG - chr5_2:76887728-76887747 Msa0789130:intron 35.0%
! TTTAGGTTTCTTTCTGGTGT+TGG - chr5_2:76887734-76887753 Msa0789130:intron 35.0%
ATTGACAGTTCAGAGTTGTA+TGG - chr5_2:76887978-76887997 Msa0789130:five_prime_UTR 35.0%
TTGACAGTTCAGAGTTGTAT+GGG - chr5_2:76887979-76887998 Msa0789130:five_prime_UTR 35.0%
AAAACCCTAGAGAAGACTAA+AGG + chr5_2:76888006-76888025 None:intergenic 35.0%
!!! TTTAGTCTTCTCTAGGGTTT+TGG - chr5_2:76888005-76888024 Msa0789130:five_prime_UTR 35.0%
GAAAAAAACAATCCTTCCCA+AGG + chr5_2:76888065-76888084 None:intergenic 35.0%
!!! ACCAAGCCCTAGTTTTTTTT+AGG - chr5_2:76888086-76888105 Msa0789130:five_prime_UTR 35.0%
GTTAAGGATTGTCAAAGGTG+TGG + chr5_2:76884712-76884731 None:intergenic 40.0%
AGAGAGAACCCTATGAGATA+GGG + chr5_2:76884772-76884791 None:intergenic 40.0%
CAGAAGAAACCTCAAAGAAG+AGG + chr5_2:76884839-76884858 None:intergenic 40.0%
! TGTGTGTTTGATTTCTCAGG+AGG - chr5_2:76885525-76885544 Msa0789130:CDS 40.0%
! GGAGGTGATGATTTTTGTAC+TGG - chr5_2:76885543-76885562 Msa0789130:CDS 40.0%
!! AAGCGAGATCTCTTTTGAAG+AGG + chr5_2:76885642-76885661 None:intergenic 40.0%
! AATGTCCCATTTGACTTCAG+TGG - chr5_2:76885663-76885682 Msa0789130:CDS 40.0%
!! ATCTCAAAGAGGCATTCATC+AGG + chr5_2:76885735-76885754 None:intergenic 40.0%
! ACCTTCTAAGGATCTCAAAG+AGG + chr5_2:76885746-76885765 None:intergenic 40.0%
GTTGCTGCAGATTTCATTCT+TGG + chr5_2:76885841-76885860 None:intergenic 40.0%
GACGGTGACAATCAAGAATT+TGG - chr5_2:76885879-76885898 Msa0789130:CDS 40.0%
TATCTTTCTCGAAGCTTGGA+GGG - chr5_2:76885912-76885931 Msa0789130:CDS 40.0%
GAGTGAAAGACTTCAGAGAA+GGG + chr5_2:76886079-76886098 None:intergenic 40.0%
AGAGTGAAAGACTTCAGAGA+AGG + chr5_2:76886080-76886099 None:intergenic 40.0%
!! CTCTGAAGTCTTTCACTCTT+TGG - chr5_2:76886081-76886100 Msa0789130:CDS 40.0%
GTTGCTACCATTAGTGACAA+AGG - chr5_2:76886107-76886126 Msa0789130:CDS 40.0%
GATCAAGCCTTTGTCACTAA+TGG + chr5_2:76886117-76886136 None:intergenic 40.0%
GTTGCCAACAATTTCTGACA+AGG - chr5_2:76886184-76886203 Msa0789130:CDS 40.0%
ATAGAGTCATGTCCTAGCAT+CGG - chr5_2:76886254-76886273 Msa0789130:CDS 40.0%
TTTCTCGGTGACATTTGGAA+GGG + chr5_2:76886498-76886517 None:intergenic 40.0%
AATCCTTTCTCGGTGACATT+TGG + chr5_2:76886503-76886522 None:intergenic 40.0%
AACTAACGTCGCTCACAATT+GGG - chr5_2:76886555-76886574 Msa0789130:CDS 40.0%
ATATTGGGCTTGAAGCTGTA+GGG - chr5_2:76886597-76886616 Msa0789130:CDS 40.0%
TGTGCATTTCTGTCAGACAA+TGG - chr5_2:76886659-76886678 Msa0789130:CDS 40.0%
GTGCATTTCTGTCAGACAAT+GGG - chr5_2:76886660-76886679 Msa0789130:CDS 40.0%
TATGGCACTCTTCCAATTGT+AGG + chr5_2:76886724-76886743 None:intergenic 40.0%
!! TACAATTGGAAGAGTGCCAT+AGG - chr5_2:76886723-76886742 Msa0789130:CDS 40.0%
TGCCATAGGATTACCCAATT+TGG - chr5_2:76886737-76886756 Msa0789130:CDS 40.0%
GCCATAGGATTACCCAATTT+GGG - chr5_2:76886738-76886757 Msa0789130:CDS 40.0%
CCATAGGATTACCCAATTTG+GGG - chr5_2:76886739-76886758 Msa0789130:CDS 40.0%
! ACCACGGTTTAAAATGACAC+CGG + chr5_2:76886768-76886787 None:intergenic 40.0%
AAACCGTGGTGCAAAATTGA+AGG - chr5_2:76886778-76886797 Msa0789130:CDS 40.0%
GAAGCAGTGAAATAAACCCT+GGG + chr5_2:76886997-76887016 None:intergenic 40.0%
TGAAGCAGTGAAATAAACCC+TGG + chr5_2:76886998-76887017 None:intergenic 40.0%
GGTTTATTTCACTGCTTCAG+AGG - chr5_2:76886999-76887018 Msa0789130:CDS 40.0%
TGCATCAATCTGACAGATGT+AGG - chr5_2:76887058-76887077 Msa0789130:CDS 40.0%
!! AGATGTAGGAGTTTTGTCCA+TGG - chr5_2:76887072-76887091 Msa0789130:CDS 40.0%
AAGTTGCATTGTTCGACTCT+TGG - chr5_2:76887097-76887116 Msa0789130:CDS 40.0%
! CTTGGAGTGCTAAACCTTAA+TGG - chr5_2:76887115-76887134 Msa0789130:CDS 40.0%
ATTGTCTGCAATTGCTGTCA+AGG + chr5_2:76887164-76887183 None:intergenic 40.0%
GATATCTATACCGCAGAATC+TGG - chr5_2:76887457-76887476 Msa0789130:intron 40.0%
!! TGCTCTGGAAAAAGAGAACT+GGG + chr5_2:76887572-76887591 None:intergenic 40.0%
!! ATGCTCTGGAAAAAGAGAAC+TGG + chr5_2:76887573-76887592 None:intergenic 40.0%
GATTGAACAACTGTATGCTC+TGG + chr5_2:76887587-76887606 None:intergenic 40.0%
!!! TTTTTTGGCATCCTGTTGAC+GGG - chr5_2:76887656-76887675 Msa0789130:intron 40.0%
AGTTACTGGGTCCTGAATTT+AGG - chr5_2:76887717-76887736 Msa0789130:intron 40.0%
AAATGGCGCGAAAAAACATC+AGG + chr5_2:76887762-76887781 None:intergenic 40.0%
!! TTTTTCGCGCCATTTTGCAT+CGG - chr5_2:76887767-76887786 Msa0789130:intron 40.0%
TACAGACTGCTGTGAAAACA+CGG + chr5_2:76887817-76887836 None:intergenic 40.0%
TGACAGTTCAGAGTTGTATG+GGG - chr5_2:76887980-76887999 Msa0789130:five_prime_UTR 40.0%
! TCGCAACAATCTTTTTCCCT+TGG - chr5_2:76888045-76888064 Msa0789130:five_prime_UTR 40.0%
! CGCAACAATCTTTTTCCCTT+GGG - chr5_2:76888046-76888065 Msa0789130:five_prime_UTR 40.0%
! ACAATCTTTTTCCCTTGGGA+AGG - chr5_2:76888050-76888069 Msa0789130:five_prime_UTR 40.0%
GCCTAAAAAAAACTAGGGCT+TGG + chr5_2:76888090-76888109 None:intergenic 40.0%
TTGGGTACATTGAGTGTGAC+AGG + chr5_2:76884658-76884677 None:intergenic 45.0%
GAGAGAGAACCCTATGAGAT+AGG + chr5_2:76884773-76884792 None:intergenic 45.0%
!! GCCTCTTTGAGATCCTTAGA+AGG - chr5_2:76885742-76885761 Msa0789130:CDS 45.0%
ATCCTTAGAAGGTTGCCTGA+AGG - chr5_2:76885753-76885772 Msa0789130:CDS 45.0%
AAGCTCCTATCTTGTCCTTC+AGG + chr5_2:76885771-76885790 None:intergenic 45.0%
!! CAACGCAAGTTCTGGAAACA+AGG - chr5_2:76885857-76885876 Msa0789130:CDS 45.0%
!! GCAAGTTCTGGAAACAAGGA+CGG - chr5_2:76885861-76885880 Msa0789130:CDS 45.0%
AGGCTATCTTTCTCGAAGCT+TGG - chr5_2:76885908-76885927 Msa0789130:CDS 45.0%
CTATCTTTCTCGAAGCTTGG+AGG - chr5_2:76885911-76885930 Msa0789130:CDS 45.0%
ATCTTTCTCGAAGCTTGGAG+GGG - chr5_2:76885913-76885932 Msa0789130:CDS 45.0%
AGATTGTGTGCCAACAGCAA+TGG + chr5_2:76885967-76885986 None:intergenic 45.0%
ACACAATCTCGAGGAGGATT+AGG - chr5_2:76885978-76885997 Msa0789130:CDS 45.0%
CACAATCTCGAGGAGGATTA+GGG - chr5_2:76885979-76885998 Msa0789130:CDS 45.0%
CTTGAGACCTACATCAGTCA+AGG + chr5_2:76886039-76886058 None:intergenic 45.0%
CTTGACTGATGTAGGTCTCA+AGG - chr5_2:76886037-76886056 Msa0789130:CDS 45.0%
GGCTTGATCGAGATTGCTAA+TGG - chr5_2:76886128-76886147 Msa0789130:CDS 45.0%
!! TGTCCTAGCATCGGTAATGA+AGG - chr5_2:76886263-76886282 Msa0789130:CDS 45.0%
AGACCTTCATTACCGATGCT+AGG + chr5_2:76886269-76886288 None:intergenic 45.0%
CTTTCTCGGTGACATTTGGA+AGG + chr5_2:76886499-76886518 None:intergenic 45.0%
CTTCCAAATGTCACCGAGAA+AGG - chr5_2:76886497-76886516 Msa0789130:CDS 45.0%
ATGTCACCGAGAAAGGATTC+TGG - chr5_2:76886504-76886523 Msa0789130:CDS 45.0%
TGTCACCGAGAAAGGATTCT+GGG - chr5_2:76886505-76886524 Msa0789130:CDS 45.0%
CATCACCCAGAATCCTTTCT+CGG + chr5_2:76886513-76886532 None:intergenic 45.0%
GAGAAAGGATTCTGGGTGAT+GGG - chr5_2:76886512-76886531 Msa0789130:CDS 45.0%
CAACTAACGTCGCTCACAAT+TGG - chr5_2:76886554-76886573 Msa0789130:CDS 45.0%
TGCCCTGGAGTAACAGATAT+TGG - chr5_2:76886581-76886600 Msa0789130:CDS 45.0%
GCCCTGGAGTAACAGATATT+GGG - chr5_2:76886582-76886601 Msa0789130:CDS 45.0%
GCCCAATATCTGTTACTCCA+GGG + chr5_2:76886586-76886605 None:intergenic 45.0%
AGCCCAATATCTGTTACTCC+AGG + chr5_2:76886587-76886606 None:intergenic 45.0%
GATATTGGGCTTGAAGCTGT+AGG - chr5_2:76886596-76886615 Msa0789130:CDS 45.0%
ATTTCTGTCAGACAATGGGC+TGG - chr5_2:76886664-76886683 Msa0789130:CDS 45.0%
CCCCAAATTGGGTAATCCTA+TGG + chr5_2:76886742-76886761 None:intergenic 45.0%
! ATTACCCAATTTGGGGTTGC+CGG - chr5_2:76886746-76886765 Msa0789130:CDS 45.0%
! GAGCCTTCAATTTTGCACCA+CGG + chr5_2:76886784-76886803 None:intergenic 45.0%
CTTACTCTGGTAAGCTGCTA+CGG - chr5_2:76886803-76886822 Msa0789130:CDS 45.0%
TTACTCTGGTAAGCTGCTAC+GGG - chr5_2:76886804-76886823 Msa0789130:CDS 45.0%
TTATCAATCCGTAACTGCCC+TGG - chr5_2:76886884-76886903 Msa0789130:CDS 45.0%
TTGAGGGAATAACAGACCCA+GGG - chr5_2:76886978-76886997 Msa0789130:CDS 45.0%
TTCACTGCTTCAGAGGTCTA+AGG - chr5_2:76887006-76887025 Msa0789130:CDS 45.0%
CGAACAATGCAACTTGACCA+TGG + chr5_2:76887092-76887111 None:intergenic 45.0%
CTGGATGTACTTTCTTTGGC+AGG - chr5_2:76887271-76887290 Msa0789130:CDS 45.0%
TTCTTTGGCAGGTTGCTCAT+TGG - chr5_2:76887282-76887301 Msa0789130:CDS 45.0%
AAAATTGGGTGATTCCCTCG+AGG - chr5_2:76887333-76887352 Msa0789130:intron 45.0%
AAATTGGGTGATTCCCTCGA+GGG - chr5_2:76887334-76887353 Msa0789130:intron 45.0%
ACGCACAGTTAACAAGCTTG+TGG - chr5_2:76887390-76887409 Msa0789130:intron 45.0%
ACAAGCTTGTGGAACATCTC+TGG - chr5_2:76887401-76887420 Msa0789130:intron 45.0%
! TGTTGGCGAGGTAGTGTTTT+TGG - chr5_2:76887509-76887528 Msa0789130:intron 45.0%
! GTTGGCGAGGTAGTGTTTTT+GGG - chr5_2:76887510-76887529 Msa0789130:intron 45.0%
GTGGCAAAACCGATGCAAAA+TGG + chr5_2:76887779-76887798 None:intergenic 45.0%
AACACGGGAACAACGAAACA+TGG + chr5_2:76887801-76887820 None:intergenic 45.0%
ACAGACTGCTGTGAAAACAC+GGG + chr5_2:76887816-76887835 None:intergenic 45.0%
GTACCAAAGTTTGTCCAGAG+TGG - chr5_2:76887834-76887853 Msa0789130:intron 45.0%
CAACCACTCTGGACAAACTT+TGG + chr5_2:76887840-76887859 None:intergenic 45.0%
CAAAGTTTGTCCAGAGTGGT+TGG - chr5_2:76887838-76887857 Msa0789130:intron 45.0%
TGTTCTGTACGCGATGTTTG+TGG - chr5_2:76887892-76887911 Msa0789130:intron 45.0%
!! TGTGGTCGCAGTTTTAGTCA+AGG - chr5_2:76887910-76887929 Msa0789130:intron 45.0%
!! GTGGTCGCAGTTTTAGTCAA+GGG - chr5_2:76887911-76887930 Msa0789130:intron 45.0%
!! TGGTCGCAGTTTTAGTCAAG+GGG - chr5_2:76887912-76887931 Msa0789130:intron 45.0%
GTCGATGTACCTTAACCCGA+AGG - chr5_2:76885569-76885588 Msa0789130:CDS 50.0%
GATGTACCTTAACCCGAAGG+AGG - chr5_2:76885572-76885591 Msa0789130:CDS 50.0%
GTCCTTCAGGCAACCTTCTA+AGG + chr5_2:76885758-76885777 None:intergenic 50.0%
GGTTGCCTGAAGGACAAGAT+AGG - chr5_2:76885763-76885782 Msa0789130:CDS 50.0%
ATCTGCAGCAACGCAAGTTC+TGG - chr5_2:76885849-76885868 Msa0789130:CDS 50.0%
TCGAAGCTTGGAGGGGAAAA+AGG - chr5_2:76885920-76885939 Msa0789130:CDS 50.0%
! AGACTAGCTGCCATTGCTGT+TGG - chr5_2:76885954-76885973 Msa0789130:CDS 50.0%
ACATCAGTCAAGGCACGATC+TGG + chr5_2:76886029-76886048 None:intergenic 50.0%
GATCGTGCCTTGACTGATGT+AGG - chr5_2:76886029-76886048 Msa0789130:CDS 50.0%
TGTCCTGGAGTTCGTGATCA+GGG - chr5_2:76886341-76886360 Msa0789130:CDS 50.0%
ATTCCCTGATCACGAACTCC+AGG + chr5_2:76886347-76886366 None:intergenic 50.0%
GTTCGTGATCAGGGAATTGC+TGG - chr5_2:76886350-76886369 Msa0789130:CDS 50.0%
CGAGAAAGGATTCTGGGTGA+TGG - chr5_2:76886511-76886530 Msa0789130:CDS 50.0%
!! GGATTCTGGGTGATGGGTAA+TGG - chr5_2:76886518-76886537 Msa0789130:CDS 50.0%
ACGTTAGTTGCTGCAGTGCA+TGG + chr5_2:76886544-76886563 None:intergenic 50.0%
CACAATTGATGGAGCAGCCT+TGG + chr5_2:76886699-76886718 None:intergenic 50.0%
!!! GCCGGTGTCATTTTAAACCG+TGG - chr5_2:76886764-76886783 Msa0789130:CDS 50.0%
GTCTGACATGGAGATACTGC+TGG + chr5_2:76886854-76886873 None:intergenic 50.0%
TACCAACTCCAGGGCAGTTA+CGG + chr5_2:76886895-76886914 None:intergenic 50.0%
CTTGAGGGAATAACAGACCC+AGG - chr5_2:76886977-76886996 Msa0789130:CDS 50.0%
! TCAGAGGTCTAAGGCCAGTT+TGG - chr5_2:76887015-76887034 Msa0789130:CDS 50.0%
! CAGAGGTCTAAGGCCAGTTT+GGG - chr5_2:76887016-76887035 Msa0789130:CDS 50.0%
! TGCATCGGTGATTGCACACT+CGG + chr5_2:76887215-76887234 None:intergenic 50.0%
AGTGTGCAATCACCGATGCA+GGG - chr5_2:76887215-76887234 Msa0789130:CDS 50.0%
AAGGGCAGAAATCCCTGCAT+CGG + chr5_2:76887230-76887249 None:intergenic 50.0%
GAACAGGACTCCACGAGTAA+GGG + chr5_2:76887248-76887267 None:intergenic 50.0%
TGAACAGGACTCCACGAGTA+AGG + chr5_2:76887249-76887268 None:intergenic 50.0%
TCGTGGAGTCCTGTTCAATC+TGG - chr5_2:76887252-76887271 Msa0789130:CDS 50.0%
TGTGACATCCTCTTCTGAGC+AGG - chr5_2:76887427-76887446 Msa0789130:intron 50.0%
TTGGGTCCATCAGTTATCGG+TGG - chr5_2:76887528-76887547 Msa0789130:intron 50.0%
TGGGTCCATCAGTTATCGGT+GGG - chr5_2:76887529-76887548 Msa0789130:intron 50.0%
CAAGACCCACCGATAACTGA+TGG + chr5_2:76887537-76887556 None:intergenic 50.0%
CATCAGTTATCGGTGGGTCT+TGG - chr5_2:76887535-76887554 Msa0789130:intron 50.0%
AAAAGCAGCATCCCGTCAAC+AGG + chr5_2:76887670-76887689 None:intergenic 50.0%
ACGGGAACAACGAAACATGG+TGG + chr5_2:76887798-76887817 None:intergenic 50.0%
TGGGTTAACACCAACCACTC+TGG + chr5_2:76887851-76887870 None:intergenic 50.0%
! TGGGGCCTTTAGTCTTCTCT+AGG - chr5_2:76887998-76888017 Msa0789130:five_prime_UTR 50.0%
! GGGGCCTTTAGTCTTCTCTA+GGG - chr5_2:76887999-76888018 Msa0789130:five_prime_UTR 50.0%
GTACCTTAACCCGAAGGAGG+CGG - chr5_2:76885575-76885594 Msa0789130:CDS 55.0%
TACCTTAACCCGAAGGAGGC+GGG - chr5_2:76885576-76885595 Msa0789130:CDS 55.0%
AAGAAGACACCCGCCTCCTT+CGG + chr5_2:76885588-76885607 None:intergenic 55.0%
GCGGGTGTCTTCTTGTCTCT+TGG - chr5_2:76885594-76885613 Msa0789130:CDS 55.0%
GTGCTTCTGTATCCAAGCGC+TGG - chr5_2:76885793-76885812 Msa0789130:CDS 55.0%
GCTGTTGGCACACAATCTCG+AGG - chr5_2:76885969-76885988 Msa0789130:CDS 55.0%
GTTGGCACACAATCTCGAGG+AGG - chr5_2:76885972-76885991 Msa0789130:CDS 55.0%
GGTCTCAAGGCAGTTGCTCA+TGG - chr5_2:76886050-76886069 Msa0789130:CDS 55.0%
CTGTCCTGGAGTTCGTGATC+AGG - chr5_2:76886340-76886359 Msa0789130:CDS 55.0%
TGGGCTTGAAGCTGTAGGGA+AGG - chr5_2:76886601-76886620 Msa0789130:CDS 55.0%
GGGCTTGAAGCTGTAGGGAA+GGG - chr5_2:76886602-76886621 Msa0789130:CDS 55.0%
!! TGGGCTGGTATCGTTCACCA+AGG - chr5_2:76886679-76886698 Msa0789130:CDS 55.0%
GACACCGGCAACCCCAAATT+GGG + chr5_2:76886753-76886772 None:intergenic 55.0%
TGACACCGGCAACCCCAAAT+TGG + chr5_2:76886754-76886773 None:intergenic 55.0%
ATCCGTAACTGCCCTGGAGT+TGG - chr5_2:76886890-76886909 Msa0789130:CDS 55.0%
GCATAGGACAGAGCTTCCCA+AGG + chr5_2:76886934-76886953 None:intergenic 55.0%
GAGTGTGCAATCACCGATGC+AGG - chr5_2:76887214-76887233 Msa0789130:CDS 55.0%
GGGATTTCTGCCCTTACTCG+TGG - chr5_2:76887235-76887254 Msa0789130:CDS 55.0%
CAAGGCTACCTGCTCAGAAG+AGG + chr5_2:76887438-76887457 None:intergenic 55.0%
AGCAGGCTACCCAGATTCTG+CGG + chr5_2:76887470-76887489 None:intergenic 55.0%
AGAAGACACCCGCCTCCTTC+GGG + chr5_2:76885587-76885606 None:intergenic 60.0%
! TAGAAGCGTGAGCCAGCGCT+TGG + chr5_2:76885808-76885827 None:intergenic 60.0%
CTCACAATTGGGCTGTGCCC+TGG - chr5_2:76886566-76886585 Msa0789130:CDS 60.0%
! CACCCGCCTCCTTCGGGTTA+AGG + chr5_2:76885581-76885600 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 76884590 76888272 76884590 ID=Msa0789130;Name=Msa0789130
chr5_2 mRNA 76884590 76888272 76884590 ID=Msa0789130-mRNA-1;Parent=Msa0789130;Name=Msa0789130-mRNA-1;_AED=0.00;_eAED=0.00;_QI=317|1|1|1|1|1|2|828|641
chr5_2 exon 76884590 76887318 76884590 ID=Msa0789130-mRNA-1:exon:23433;Parent=Msa0789130-mRNA-1
chr5_2 exon 76887931 76888272 76887931 ID=Msa0789130-mRNA-1:exon:23432;Parent=Msa0789130-mRNA-1
chr5_2 five_prime_UTR 76887956 76888272 76887956 ID=Msa0789130-mRNA-1:five_prime_utr;Parent=Msa0789130-mRNA-1
chr5_2 CDS 76887931 76887955 76887931 ID=Msa0789130-mRNA-1:cds;Parent=Msa0789130-mRNA-1
chr5_2 CDS 76885418 76887318 76885418 ID=Msa0789130-mRNA-1:cds;Parent=Msa0789130-mRNA-1
chr5_2 three_prime_UTR 76884590 76885417 76884590 ID=Msa0789130-mRNA-1:three_prime_utr;Parent=Msa0789130-mRNA-1
Gene Sequence

>Msa0789130

ATGTCTAAAGTTCTCAGCTTTACCGGAGGTGATGATTTTTGTACTGGAAGGTCGATGTACCTTAACCCGAAGGAGGCGGGTGTCTTCTTGTCTCTTGGCCGTCAAGAATATGCTTACAGACCTCTTCAAAAGAGATCTCGCTTCAATGTCCCATTTGACTTCAGTGGAGAAAAATGGTTTGAGCAGAAGCTAGAGACATCTATTGAAACATTGCCTGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGAAGGACAAGATAGGAGCTTATGTGCTTCTGTATCCAAGCGCTGGCTCACGCTTCTAAGCAGTATTTCCAAGAATGAAATCTGCAGCAACGCAAGTTCTGGAAACAAGGACGGTGACAATCAAGAATTTGGTGATGTAGGCTATCTTTCTCGAAGCTTGGAGGGGAAAAAGGCAACAGATGTCAGACTAGCTGCCATTGCTGTTGGCACACAATCTCGAGGAGGATTAGGGAAGCTTTCAATTCATGGAAGCAATCCAGATCGTGCCTTGACTGATGTAGGTCTCAAGGCAGTTGCTCATGGCTGCCCTTCTCTGAAGTCTTTCACTCTTTGGGATGTTGCTACCATTAGTGACAAAGGCTTGATCGAGATTGCTAATGGTTGTCATCAGATAGAGGAGCTTGACCTATGCAAGTTGCCAACAATTTCTGACAAGGCTTTGATTGCAGTTGCAAAGCACTGTCCGAATCTGACTGAGTTATCGATAGAGTCATGTCCTAGCATCGGTAATGAAGGTCTACATGCTATTGGAAAGTTGTGTCCAAATCTAAGGTCCGTATCAATTAAAAACTGTCCTGGAGTTCGTGATCAGGGAATTGCTGGCCTATTATGTTCAGCATCCATTATTCTAAAAAAGCTGACACTTGAATCGCTAGCTGTTTCTGATTACTCACTAGCAGTTATTGGACAATATGGCTTTGTGGTTACTGATCTTGTCTTAAATTCCCTTCCAAATGTCACCGAGAAAGGATTCTGGGTGATGGGTAATGGCCATGCACTGCAGCAACTAACGTCGCTCACAATTGGGCTGTGCCCTGGAGTAACAGATATTGGGCTTGAAGCTGTAGGGAAGGGTTGTCCAAATGTGAAAAACTTTCAGCTTCGTAGGTGTGCATTTCTGTCAGACAATGGGCTGGTATCGTTCACCAAGGCTGCTCCATCAATTGTGAGCCTACAATTGGAAGAGTGCCATAGGATTACCCAATTTGGGGTTGCCGGTGTCATTTTAAACCGTGGTGCAAAATTGAAGGCTCTTACTCTGGTAAGCTGCTACGGGATCAAAGATCTGAATCTCAATTTGCCAGCAGTATCTCCATGTCAGACAATTTCGTCATTATCAATCCGTAACTGCCCTGGAGTTGGTAATTTTACTCTCAACGTCCTTGGGAAGCTCTGTCCTATGCTTCAGTGTCTTGAATTGATTGGACTTGAGGGAATAACAGACCCAGGGTTTATTTCACTGCTTCAGAGGTCTAAGGCCAGTTTGGGTAATGTTAATCTAAGTGGTTGCATCAATCTGACAGATGTAGGAGTTTTGTCCATGGTCAAGTTGCATTGTTCGACTCTTGGAGTGCTAAACCTTAATGGTTGTAAAAAGGTCGGGGATGCTTCCTTGACAGCAATTGCAGACAATTGCATTGTCTTGAGTGATCTTGATGTTTCCGAGTGTGCAATCACCGATGCAGGGATTTCTGCCCTTACTCGTGGAGTCCTGTTCAATCTGGATGTACTTTCTTTGGCAGGTTGCTCATTGGTTTCAAACAAGAGCTTGTCTGCTTTGAAAAAATTGGGTGATTCCCTCGAGGGATTAAATATAAAAAATTGCAATTCGATCAGCAGACGCACAGTTAACAAGCTTGTGGAACATCTCTGGATGTGTGACATCCTCTTCTGA
Protein sequence

>Msa0789130

MSKVLSFTGGDDFCTGRSMYLNPKEAGVFLSLGRQEYAYRPLQKRSRFNVPFDFSGEKWFEQKLETSIETLPDECLFEILRRLPEGQDRSLCASVSKRWLTLLSSISKNEICSNASSGNKDGDNQEFGDVGYLSRSLEGKKATDVRLAAIAVGTQSRGGLGKLSIHGSNPDRALTDVGLKAVAHGCPSLKSFTLWDVATISDKGLIEIANGCHQIEELDLCKLPTISDKALIAVAKHCPNLTELSIESCPSIGNEGLHAIGKLCPNLRSVSIKNCPGVRDQGIAGLLCSASIILKKLTLESLAVSDYSLAVIGQYGFVVTDLVLNSLPNVTEKGFWVMGNGHALQQLTSLTIGLCPGVTDIGLEAVGKGCPNVKNFQLRRCAFLSDNGLVSFTKAAPSIVSLQLEECHRITQFGVAGVILNRGAKLKALTLVSCYGIKDLNLNLPAVSPCQTISSLSIRNCPGVGNFTLNVLGKLCPMLQCLELIGLEGITDPGFISLLQRSKASLGNVNLSGCINLTDVGVLSMVKLHCSTLGVLNLNGCKKVGDASLTAIADNCIVLSDLDVSECAITDAGISALTRGVLFNLDVLSLAGCSLVSNKSLSALKKLGDSLEGLNIKNCNSISRRTVNKLVEHLWMCDILF*