AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0975960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0975960 MtrunA17_Chr6g0454761 94.493 454 25 0 6 459 4 457 0.0 884
Msa0975960 MtrunA17_Chr6g0454761 79.221 462 87 3 4 459 487 945 0.0 723
Msa0975960 MtrunA17_Chr6g0455341 54.310 464 194 8 8 459 6 463 4.23e-169 483
Msa0975960 MtrunA17_Chr6g0455361 57.045 440 177 7 25 459 28 460 1.50e-166 477
Msa0975960 MtrunA17_Chr7g0219331 46.004 463 228 9 11 458 98 553 1.39e-139 411
Msa0975960 MtrunA17_Chr6g0455351 48.707 464 183 10 9 459 7 428 1.21e-136 399
Msa0975960 MtrunA17_Chr7g0219301 44.902 461 232 10 11 456 5 458 3.63e-131 400
Msa0975960 MtrunA17_Chr7g0219301 43.629 259 133 6 207 458 631 883 8.35e-55 196
Msa0975960 MtrunA17_Chr7g0219301 44.860 107 54 2 27 133 533 634 5.25e-23 102
Msa0975960 MtrunA17_Chr7g0219291 41.239 468 254 10 6 456 352 815 7.47e-107 335
Msa0975960 MtrunA17_Chr7g0219291 36.014 286 164 7 172 443 35 315 4.86e-43 162
Msa0975960 MtrunA17_Chr6g0454741 73.953 215 48 2 77 289 20 228 9.01e-107 316
Msa0975960 MtrunA17_Chr6g0454741 56.164 73 26 1 368 434 165 237 1.05e-19 88.2
Msa0975960 MtrunA17_Chr7g0219241 40.506 474 248 14 9 456 8 473 1.74e-105 322
Msa0975960 MtrunA17_Chr7g0219121 39.030 474 258 10 10 456 8 477 1.62e-104 319
Msa0975960 MtrunA17_Chr7g0219181 38.365 477 261 12 9 458 7 477 1.86e-101 311
Msa0975960 MtrunA17_Chr7g0219101 33.333 480 246 10 1 456 1 430 4.01e-75 242
Msa0975960 MtrunA17_Chr2g0323511 32.278 474 285 11 13 459 21 485 2.05e-70 231
Msa0975960 MtrunA17_Chr8g0339641 32.618 466 273 12 25 459 20 475 7.54e-66 219
Msa0975960 MtrunA17_Chr2g0323471 32.965 452 266 12 27 456 41 477 1.37e-65 218
Msa0975960 MtrunA17_Chr3g0087901 29.583 480 304 9 1 459 1 467 6.49e-64 213
Msa0975960 MtrunA17_Chr2g0323421 30.453 486 284 14 5 459 50 512 5.70e-61 207
Msa0975960 MtrunA17_Chr7g0219211 40.433 277 152 7 8 273 7 281 1.10e-59 199
Msa0975960 MtrunA17_Chr2g0323501 31.250 464 262 13 31 459 37 478 2.44e-58 199
Msa0975960 MtrunA17_Chr2g0323481 31.377 443 260 12 44 459 39 464 2.49e-57 196
Msa0975960 MtrunA17_Chr3g0124341 29.569 487 279 16 13 457 9 473 1.76e-55 191
Msa0975960 MtrunA17_Chr3g0083761 29.752 484 277 12 12 459 8 464 2.98e-53 185
Msa0975960 MtrunA17_Chr7g0219191 47.291 203 101 4 21 217 9 211 4.98e-52 175
Msa0975960 MtrunA17_Chr7g0219351 40.991 222 122 5 77 292 14 232 1.68e-51 174
Msa0975960 MtrunA17_Chr7g0219881 30.335 478 267 12 12 452 8 456 1.90e-49 175
Msa0975960 MtrunA17_Chr7g0219251 46.821 173 89 2 4 173 1 173 5.06e-46 157
Msa0975960 MtrunA17_Chr7g0219341 49.007 151 74 2 308 458 5 152 1.16e-42 148
Msa0975960 MtrunA17_Chr7g0219311 44.667 150 80 2 292 441 1 147 7.96e-34 124
Msa0975960 MtrunA17_Chr3g0092011 29.643 280 172 8 12 275 2 272 1.02e-29 117
Msa0975960 MtrunA17_Chr7g0219221 41.830 153 83 4 306 456 10 158 2.05e-29 112
Msa0975960 MtrunA17_Chr2g0323441 41.176 170 90 4 13 173 7 175 5.92e-29 112
Msa0975960 MtrunA17_Chr7g0219201 34.896 192 119 3 269 456 13 202 5.18e-27 107
Msa0975960 MtrunA17_Chr2g0334001 23.515 421 277 15 47 452 39 429 6.38e-23 100
Msa0975960 MtrunA17_Chr4g0001861 24.048 420 269 16 47 448 39 426 9.64e-23 100
Msa0975960 MtrunA17_Chr8g0371821 23.765 425 266 15 47 451 39 425 1.70e-22 99.4
Msa0975960 MtrunA17_Chr3g0087221 25.216 464 298 17 8 449 2 438 2.57e-20 93.2
Msa0975960 MtrunA17_Chr4g0053111 25.559 313 199 9 145 449 152 438 2.37e-19 90.1
Msa0975960 MtrunA17_Chr2g0311401 23.585 318 207 9 148 452 5 299 2.15e-18 85.5
Msa0975960 MtrunA17_Chr3g0125001 25.063 395 251 12 31 411 24 387 9.57e-18 85.1
Msa0975960 MtrunA17_Chr8g0359251 27.215 316 185 11 145 447 147 430 1.89e-17 84.3
Msa0975960 MtrunA17_Chr4g0010381 26.182 275 177 8 145 411 138 394 6.64e-17 82.8
Msa0975960 MtrunA17_Chr8g0386141 26.059 307 197 8 148 448 140 422 8.76e-17 82.4
Msa0975960 MtrunA17_Chr4g0010361 27.143 280 170 11 145 411 138 396 3.96e-16 80.5
Msa0975960 MtrunA17_Chr4g0010121 23.218 435 259 18 6 411 47 435 1.24e-15 79.0
Msa0975960 MtrunA17_Chr4g0072041 22.737 475 311 14 10 456 14 460 1.64e-15 78.6
Msa0975960 MtrunA17_Chr4g0010331 24.768 323 204 11 139 449 130 425 1.97e-15 78.2
Msa0975960 MtrunA17_Chr3g0087401 23.810 420 271 16 62 452 48 447 2.50e-15 77.8
Msa0975960 MtrunA17_Chr7g0252731 24.773 331 209 11 54 366 48 356 2.84e-14 74.7
Msa0975960 MtrunA17_Chr2g0306321 24.497 298 196 12 145 433 160 437 3.52e-14 74.3
Msa0975960 MtrunA17_Chr7g0253541 19.588 485 325 14 9 457 3 458 6.52e-14 73.6
Msa0975960 MtrunA17_Chr3g0134091 22.759 435 289 15 31 445 29 436 1.43e-13 72.4
Msa0975960 MtrunA17_Chr4g0010351 23.861 373 227 14 23 371 16 355 2.44e-13 71.2
Msa0975960 MtrunA17_Chr7g0235531 23.598 428 274 17 49 454 41 437 3.01e-13 71.2
Msa0975960 MtrunA17_Chr8g0376901 22.122 443 291 16 24 448 14 420 4.98e-13 70.9
Msa0975960 MtrunA17_Chr5g0438701 22.468 316 214 9 142 452 129 418 9.91e-13 69.7
Msa0975960 MtrunA17_Chr2g0323491 45.714 70 38 0 390 459 11 80 1.05e-12 63.5
Msa0975960 MtrunA17_Chr3g0134061 25.499 451 249 20 7 411 2 411 1.12e-12 69.7
Msa0975960 MtrunA17_Chr4g0054081 23.125 480 318 17 4 456 1 456 1.18e-12 69.7
Msa0975960 MtrunA17_Chr3g0092001 32.174 115 72 2 345 459 12 120 1.20e-12 64.7
Msa0975960 MtrunA17_Chr7g0253531 23.398 359 230 12 131 459 117 460 2.46e-12 68.6
Msa0975960 MtrunA17_Chr7g0253501 23.810 357 231 11 131 459 117 460 2.82e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0975960 AT5G39090.1 35.652 460 275 10 5 457 3 448 8.79e-87 273
Msa0975960 AT5G39050.1 35.307 473 271 13 8 457 8 468 6.99e-83 263
Msa0975960 AT3G29635.1 35.244 471 266 15 9 457 2 455 3.38e-81 259
Msa0975960 AT3G29590.1 33.839 461 277 13 8 457 6 449 2.47e-80 256
Msa0975960 AT3G29680.1 35.281 445 267 11 22 457 16 448 3.19e-80 256
Msa0975960 AT3G29670.1 34.624 439 264 9 29 458 27 451 1.02e-77 249
Msa0975960 AT5G39080.1 33.049 469 276 15 8 452 3 457 2.72e-76 246
Msa0975960 AT5G61160.1 30.568 458 295 11 9 454 2 448 9.71e-75 242
Msa0975960 AT1G03940.1 31.210 471 286 15 11 457 9 465 1.42e-58 200
Msa0975960 AT1G03495.1 33.233 331 193 11 20 332 19 339 2.99e-38 142
Msa0975960 AT5G23940.1 25.400 437 287 15 29 446 23 439 2.13e-22 100
Msa0975960 AT5G48930.1 25.223 337 221 11 130 454 115 432 2.21e-21 96.7
Msa0975960 AT3G29720.1 34.426 183 109 6 105 283 26 201 3.32e-21 92.4
Msa0975960 AT3G29690.1 32.484 157 95 4 304 458 33 180 1.33e-20 89.4
Msa0975960 AT2G19070.1 23.591 479 303 18 10 456 4 451 3.37e-19 90.1
Msa0975960 AT3G48720.1 25.117 426 264 17 44 452 41 428 5.38e-18 86.3
Msa0975960 AT5G67150.1 25.393 445 279 15 23 446 21 433 2.17e-16 81.6
Msa0975960 AT5G57840.1 22.419 339 234 10 131 456 116 438 5.91e-14 73.9
Msa0975960 AT3G26040.1 23.855 415 237 14 65 450 56 420 4.77e-13 71.2
Msa0975960 AT5G63560.1 23.034 356 223 13 68 408 61 380 3.95e-12 68.2
Msa0975960 AT5G67160.1 23.529 374 242 12 65 426 53 394 7.36e-12 67.4
Msa0975960 AT5G38130.1 25.743 303 195 8 145 441 165 443 8.40e-12 67.4
Msa0975960 AT3G50270.1 26.642 274 168 11 145 408 147 397 2.58e-11 65.9
Msa0975960 AT5G07850.1 23.684 418 279 13 47 448 49 442 5.76e-11 64.7
Msa0975960 AT1G24430.1 23.163 449 261 17 26 448 24 414 9.21e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTAATGCAAATTATTT+TGG 0.039056 6_4:-9783477 Msa0975960:CDS
CCAAAATAATTTGCATTAAT+TGG 0.091109 6_4:+9783477 None:intergenic
TGTTAAATGGTTTGGAAAAT+TGG 0.194705 6_4:-9783338 Msa0975960:CDS
AACAAATAATCGAAGCTTAA+AGG 0.216613 6_4:-9783736 Msa0975960:CDS
ATTTGACTCAGCTACAATTA+AGG 0.240047 6_4:+9784109 None:intergenic
GGGTTTATTAGTGCTCTTAA+AGG 0.251648 6_4:-9783396 Msa0975960:CDS
GTGCTTATTTGTTGTCATTA+GGG 0.252895 6_4:-9783575 Msa0975960:CDS
AAAGAAGTGGTTGATACATT+TGG 0.269259 6_4:+9784269 None:intergenic
TGTGCTTATTTGTTGTCATT+AGG 0.279006 6_4:-9783576 Msa0975960:CDS
TAACTTTCTTTGACACACTA+TGG 0.279069 6_4:-9784334 Msa0975960:CDS
ATCTAAGGTTGAAAATAAAA+AGG 0.282585 6_4:-9783619 Msa0975960:CDS
TTGGAAAATGGTGTGTTAAA+TGG 0.282675 6_4:-9783351 Msa0975960:CDS
AAAACAGTTAATCCCAAGTT+TGG 0.285883 6_4:-9784039 Msa0975960:CDS
TCAAGAGAGTGTTTGAGATT+TGG 0.304260 6_4:+9784230 None:intergenic
GTGTTGAGTGATTTGGAAAA+TGG 0.323996 6_4:-9783363 Msa0975960:CDS
TTTGTTTGAATTATCACCTT+TGG 0.324163 6_4:-9783670 Msa0975960:CDS
AATTGATGTGTTGAGTGATT+TGG 0.327705 6_4:-9783370 Msa0975960:CDS
TTTGACTCAGCTACAATTAA+GGG 0.333807 6_4:+9784110 None:intergenic
TCATGTGAAATTTCCAAACT+TGG 0.337619 6_4:+9784026 None:intergenic
AAGAAGTGGTTGATACATTT+GGG 0.337994 6_4:+9784270 None:intergenic
TAAGAAATATGCACAATCTA+AGG 0.339968 6_4:-9783634 Msa0975960:CDS
CCTAACCATGGATTTGGTAT+TGG 0.341869 6_4:-9783966 Msa0975960:CDS
GAAGTAACATCAACTTTCTT+AGG 0.346906 6_4:+9783204 None:intergenic
CAACTTTGTTTATGAATGCT+TGG 0.362678 6_4:-9783905 Msa0975960:CDS
ATAATCGAAGCTTAAAGGTT+TGG 0.373753 6_4:-9783731 Msa0975960:CDS
TTCTTGTTGGTAACATCATA+TGG 0.376227 6_4:-9784184 Msa0975960:CDS
TGAATTTCATTTATTCCTAA+AGG 0.386899 6_4:+9783789 None:intergenic
AAATGGTGTGTTAAATGGTT+TGG 0.391639 6_4:-9783346 Msa0975960:CDS
TCCATTATAAAAGACCCTTT+AGG 0.400364 6_4:-9783804 Msa0975960:CDS
GAATTTCATTTATTCCTAAA+GGG 0.407307 6_4:+9783790 None:intergenic
AACCACTTCCTCCTTCTTGT+TGG 0.407332 6_4:-9784197 Msa0975960:CDS
ACACACCATGCAGCTGTTGA+TGG 0.410923 6_4:-9783936 Msa0975960:CDS
GTGTTTGAGATTTGGAAGAA+TGG 0.421678 6_4:+9784238 None:intergenic
TAGTGTGTCAAAGAAAGTTA+AGG 0.428756 6_4:+9784337 None:intergenic
GGTTTATTAGTGCTCTTAAA+GGG 0.434713 6_4:-9783395 Msa0975960:CDS
AATGATGGTGGAATTGAGAT+TGG 0.442831 6_4:-9783138 Msa0975960:CDS
GACTTTGAACAAGCAACAAA+TGG 0.453802 6_4:-9783112 Msa0975960:CDS
TGTTGATTGTAGGTCACGTT+TGG 0.456001 6_4:-9783505 Msa0975960:CDS
CATGTGAAATTTCCAAACTT+GGG 0.459105 6_4:+9784027 None:intergenic
AAATAATTTGCATTAATTGG+TGG 0.462390 6_4:+9783480 None:intergenic
CCAATACCAAATCCATGGTT+AGG 0.462995 6_4:+9783966 None:intergenic
AAGTTAAGGGAAAAGTGGTT+GGG 0.463539 6_4:+9784351 None:intergenic
AGTGTGTCAAAGAAAGTTAA+GGG 0.481845 6_4:+9784338 None:intergenic
AAAGAAAGTTAAGGGAAAAG+TGG 0.493670 6_4:+9784346 None:intergenic
ACTAGGGACATAGTTGATGA+TGG 0.495669 6_4:+9784142 None:intergenic
TGCTTATTTGTTGTCATTAG+GGG 0.498107 6_4:-9783574 Msa0975960:CDS
TAGAAGAAGAGACGTTCAAC+TGG 0.500653 6_4:+9784299 None:intergenic
CTCAGCTACAATTAAGGGAA+TGG 0.503277 6_4:+9784115 None:intergenic
GTAAATCCTTCAAACTTACA+AGG 0.509431 6_4:+9783053 None:intergenic
AAATTATACACCTCAAACCT+AGG 0.524375 6_4:+9783246 None:intergenic
TAAGAAAGTTGATGTTACTT+CGG 0.530062 6_4:-9783202 Msa0975960:CDS
AAAGTTAAGGGAAAAGTGGT+TGG 0.535581 6_4:+9784350 None:intergenic
TAAGGGAAAAGTGGTTGGGG+AGG 0.538764 6_4:+9784355 None:intergenic
AAAACAATAAGTGCAACAAA+TGG 0.550059 6_4:-9783708 Msa0975960:CDS
AGTTAAGGGAAAAGTGGTTG+GGG 0.552744 6_4:+9784352 None:intergenic
TACCAACAAGAAGGAGGAAG+TGG 0.558114 6_4:+9784195 None:intergenic
AGGCATTGTTAGAAGATGGT+GGG 0.559443 6_4:-9783416 Msa0975960:CDS
CACCTCAAACCTAGGTGACC+CGG 0.561487 6_4:+9783254 None:intergenic
TCAGGAAATAGGAATAATGA+TGG 0.563821 6_4:-9783153 Msa0975960:CDS
GCAATCTAAAACATCTAGAA+CGG 0.568645 6_4:-9783304 Msa0975960:CDS
GGAAATAGGAATAATGATGG+TGG 0.570392 6_4:-9783150 Msa0975960:CDS
ATTAAGGGAATGGAATCACT+AGG 0.573426 6_4:+9784125 None:intergenic
GAGGCATTGTTAGAAGATGG+TGG 0.582858 6_4:-9783417 Msa0975960:CDS
CTAGGGACATAGTTGATGAT+GGG 0.584622 6_4:+9784143 None:intergenic
ACAAATGGTGAAGCAGTCAA+AGG 0.589991 6_4:-9783693 Msa0975960:CDS
TTTGAACAAGCAACAAATGG+AGG 0.592025 6_4:-9783109 Msa0975960:CDS
AATGGAATCAAAGAAAGAAG+TGG 0.597523 6_4:+9784256 None:intergenic
TTTCTATTACCGGGTCACCT+AGG 0.609709 6_4:-9783263 Msa0975960:CDS
TTATACCAATACCAAATCCA+TGG 0.616095 6_4:+9783961 None:intergenic
GTTACTTCGGTTGATAGACC+AGG 0.617818 6_4:-9783189 Msa0975960:CDS
AAGAAGAGACGTTCAACTGG+TGG 0.634712 6_4:+9784302 None:intergenic
ATTAGTTGTGCATGAAACTG+AGG 0.641688 6_4:-9783436 Msa0975960:CDS
ACTGAGGCATTGTTAGAAGA+TGG 0.644512 6_4:-9783420 Msa0975960:CDS
ACATAGTTGATGATGGGATG+TGG 0.647494 6_4:+9784149 None:intergenic
ATGGGATGTGGTGAATCTTG+TGG 0.652055 6_4:+9784161 None:intergenic
TGATGTTACCAACAAGAAGG+AGG 0.653468 6_4:+9784189 None:intergenic
ATATGATGTTACCAACAAGA+AGG 0.654769 6_4:+9784186 None:intergenic
TTAAGGGAATGGAATCACTA+GGG 0.654848 6_4:+9784126 None:intergenic
ATCAACAGCTGCATGGTGTG+TGG 0.669169 6_4:+9783938 None:intergenic
ACTCTGATAGATGTTGATGA+TGG 0.679521 6_4:+9784413 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAATTCATTCAAAAAAA+TGG - chr6_4:9783717-9783736 Msa0975960:CDS 15.0%
!!! CAATTAATGCAAATTATTTT+GGG - chr6_4:9784017-9784036 Msa0975960:CDS 15.0%
!!! TATAAGATTTTTTCTATTAC+CGG - chr6_4:9784220-9784239 Msa0975960:CDS 15.0%
!! ATGAAATTCATTCAAAAAAA+TGG - chr6_4:9783717-9783736 Msa0975960:CDS 15.0%
!!! CAATTAATGCAAATTATTTT+GGG - chr6_4:9784017-9784036 Msa0975960:CDS 15.0%
!!! TATAAGATTTTTTCTATTAC+CGG - chr6_4:9784220-9784239 Msa0975960:CDS 15.0%
!! GAATTTCATTTATTCCTAAA+GGG + chr6_4:9783706-9783725 None:intergenic 20.0%
!! TGAATTTCATTTATTCCTAA+AGG + chr6_4:9783707-9783726 None:intergenic 20.0%
!!! ATCTAAGGTTGAAAATAAAA+AGG - chr6_4:9783874-9783893 Msa0975960:CDS 20.0%
!!! AAATAATTTGCATTAATTGG+TGG + chr6_4:9784016-9784035 None:intergenic 20.0%
!!! CCAAAATAATTTGCATTAAT+TGG + chr6_4:9784019-9784038 None:intergenic 20.0%
!!! CCAATTAATGCAAATTATTT+TGG - chr6_4:9784016-9784035 Msa0975960:CDS 20.0%
!!! ATAAGATTTTTTCTATTACC+GGG - chr6_4:9784221-9784240 Msa0975960:CDS 20.0%
!!! AGGTGTATAATTTTGATTTT+GGG - chr6_4:9784257-9784276 Msa0975960:CDS 20.0%
!! GAATTTCATTTATTCCTAAA+GGG + chr6_4:9783706-9783725 None:intergenic 20.0%
!! TGAATTTCATTTATTCCTAA+AGG + chr6_4:9783707-9783726 None:intergenic 20.0%
!!! ATCTAAGGTTGAAAATAAAA+AGG - chr6_4:9783874-9783893 Msa0975960:CDS 20.0%
!!! AAATAATTTGCATTAATTGG+TGG + chr6_4:9784016-9784035 None:intergenic 20.0%
!!! CCAAAATAATTTGCATTAAT+TGG + chr6_4:9784019-9784038 None:intergenic 20.0%
!!! CCAATTAATGCAAATTATTT+TGG - chr6_4:9784016-9784035 Msa0975960:CDS 20.0%
!!! ATAAGATTTTTTCTATTACC+GGG - chr6_4:9784221-9784240 Msa0975960:CDS 20.0%
!!! AGGTGTATAATTTTGATTTT+GGG - chr6_4:9784257-9784276 Msa0975960:CDS 20.0%
!!! TTTTTCAACTTCACAAAGAT+TGG + chr6_4:9783432-9783451 None:intergenic 25.0%
!!! TTTTGAGGTAAAAACATAGA+GGG + chr6_4:9783647-9783666 None:intergenic 25.0%
!!! ATTTTGAGGTAAAAACATAG+AGG + chr6_4:9783648-9783667 None:intergenic 25.0%
!!! AAAAAAGGTGTTAGATTTTG+AGG + chr6_4:9783662-9783681 None:intergenic 25.0%
!!! ATCTAACACCTTTTTTTGAT+AGG - chr6_4:9783666-9783685 Msa0975960:CDS 25.0%
!!! ATAATGGACCTATCAAAAAA+AGG + chr6_4:9783677-9783696 None:intergenic 25.0%
! TCAAAAAAATGGATGAATGT+TGG - chr6_4:9783728-9783747 Msa0975960:CDS 25.0%
! AACAAATAATCGAAGCTTAA+AGG - chr6_4:9783757-9783776 Msa0975960:CDS 25.0%
! AAAACAATAAGTGCAACAAA+TGG - chr6_4:9783785-9783804 Msa0975960:CDS 25.0%
! TTTGTTTGAATTATCACCTT+TGG - chr6_4:9783823-9783842 Msa0975960:CDS 25.0%
!! TTAAGCTTTTGAATATCCAA+AGG + chr6_4:9783842-9783861 None:intergenic 25.0%
! TAAGAAATATGCACAATCTA+AGG - chr6_4:9783859-9783878 Msa0975960:CDS 25.0%
!! TAAAAAGGTTTCAACTTTTG+CGG - chr6_4:9783889-9783908 Msa0975960:CDS 25.0%
!! TGTTAAATGGTTTGGAAAAT+TGG - chr6_4:9784155-9784174 Msa0975960:CDS 25.0%
!!! GAGGTGTATAATTTTGATTT+TGG - chr6_4:9784256-9784275 Msa0975960:CDS 25.0%
!!! TGTATAATTTTGATTTTGGG+TGG - chr6_4:9784260-9784279 Msa0975960:CDS 25.0%
!!! GTATAATTTTGATTTTGGGT+GGG - chr6_4:9784261-9784280 Msa0975960:CDS 25.0%
!!! TATAATTTTGATTTTGGGTG+GGG - chr6_4:9784262-9784281 Msa0975960:CDS 25.0%
!!! TAAGAAAGTTGATGTTACTT+CGG - chr6_4:9784291-9784310 Msa0975960:CDS 25.0%
!! CTTTTTATCTTTCAGGAAAT+AGG - chr6_4:9784329-9784348 Msa0975960:CDS 25.0%
!!! TTTTTCAACTTCACAAAGAT+TGG + chr6_4:9783432-9783451 None:intergenic 25.0%
!!! TTTTGAGGTAAAAACATAGA+GGG + chr6_4:9783647-9783666 None:intergenic 25.0%
!!! ATTTTGAGGTAAAAACATAG+AGG + chr6_4:9783648-9783667 None:intergenic 25.0%
!!! AAAAAAGGTGTTAGATTTTG+AGG + chr6_4:9783662-9783681 None:intergenic 25.0%
!!! ATCTAACACCTTTTTTTGAT+AGG - chr6_4:9783666-9783685 Msa0975960:CDS 25.0%
!!! ATAATGGACCTATCAAAAAA+AGG + chr6_4:9783677-9783696 None:intergenic 25.0%
! TCAAAAAAATGGATGAATGT+TGG - chr6_4:9783728-9783747 Msa0975960:CDS 25.0%
! AACAAATAATCGAAGCTTAA+AGG - chr6_4:9783757-9783776 Msa0975960:CDS 25.0%
! AAAACAATAAGTGCAACAAA+TGG - chr6_4:9783785-9783804 Msa0975960:CDS 25.0%
! TTTGTTTGAATTATCACCTT+TGG - chr6_4:9783823-9783842 Msa0975960:CDS 25.0%
!! TTAAGCTTTTGAATATCCAA+AGG + chr6_4:9783842-9783861 None:intergenic 25.0%
! TAAGAAATATGCACAATCTA+AGG - chr6_4:9783859-9783878 Msa0975960:CDS 25.0%
!! TAAAAAGGTTTCAACTTTTG+CGG - chr6_4:9783889-9783908 Msa0975960:CDS 25.0%
!! TGTTAAATGGTTTGGAAAAT+TGG - chr6_4:9784155-9784174 Msa0975960:CDS 25.0%
!!! GAGGTGTATAATTTTGATTT+TGG - chr6_4:9784256-9784275 Msa0975960:CDS 25.0%
!!! TGTATAATTTTGATTTTGGG+TGG - chr6_4:9784260-9784279 Msa0975960:CDS 25.0%
!!! GTATAATTTTGATTTTGGGT+GGG - chr6_4:9784261-9784280 Msa0975960:CDS 25.0%
!!! TATAATTTTGATTTTGGGTG+GGG - chr6_4:9784262-9784281 Msa0975960:CDS 25.0%
!!! TAAGAAAGTTGATGTTACTT+CGG - chr6_4:9784291-9784310 Msa0975960:CDS 25.0%
!! CTTTTTATCTTTCAGGAAAT+AGG - chr6_4:9784329-9784348 Msa0975960:CDS 25.0%
AAAGAAAGTTAAGGGAAAAG+TGG + chr6_4:9783150-9783169 None:intergenic 30.0%
AGTGTGTCAAAGAAAGTTAA+GGG + chr6_4:9783158-9783177 None:intergenic 30.0%
TAGTGTGTCAAAGAAAGTTA+AGG + chr6_4:9783159-9783178 None:intergenic 30.0%
TAACTTTCTTTGACACACTA+TGG - chr6_4:9783159-9783178 Msa0975960:CDS 30.0%
! AAGAAGTGGTTGATACATTT+GGG + chr6_4:9783226-9783245 None:intergenic 30.0%
! AAAGAAGTGGTTGATACATT+TGG + chr6_4:9783227-9783246 None:intergenic 30.0%
AATGGAATCAAAGAAAGAAG+TGG + chr6_4:9783240-9783259 None:intergenic 30.0%
ATATGATGTTACCAACAAGA+AGG + chr6_4:9783310-9783329 None:intergenic 30.0%
!! TTCTTGTTGGTAACATCATA+TGG - chr6_4:9783309-9783328 Msa0975960:CDS 30.0%
TTTGACTCAGCTACAATTAA+GGG + chr6_4:9783386-9783405 None:intergenic 30.0%
ATTTGACTCAGCTACAATTA+AGG + chr6_4:9783387-9783406 None:intergenic 30.0%
AAAACAGTTAATCCCAAGTT+TGG - chr6_4:9783454-9783473 Msa0975960:CDS 30.0%
CATGTGAAATTTCCAAACTT+GGG + chr6_4:9783469-9783488 None:intergenic 30.0%
TCATGTGAAATTTCCAAACT+TGG + chr6_4:9783470-9783489 None:intergenic 30.0%
!!! TTTTTTCCTAACCATGGATT+TGG - chr6_4:9783521-9783540 Msa0975960:CDS 30.0%
TTATACCAATACCAAATCCA+TGG + chr6_4:9783535-9783554 None:intergenic 30.0%
! CAACTTTGTTTATGAATGCT+TGG - chr6_4:9783588-9783607 Msa0975960:CDS 30.0%
TCCATTATAAAAGACCCTTT+AGG - chr6_4:9783689-9783708 Msa0975960:CDS 30.0%
! TCCTAAAGGGTCTTTTATAA+TGG + chr6_4:9783693-9783712 None:intergenic 30.0%
AAAAAATGGATGAATGTTGG+TGG - chr6_4:9783731-9783750 Msa0975960:CDS 30.0%
ATAATCGAAGCTTAAAGGTT+TGG - chr6_4:9783762-9783781 Msa0975960:CDS 30.0%
!! TGTGCTTATTTGTTGTCATT+AGG - chr6_4:9783917-9783936 Msa0975960:CDS 30.0%
!! GTGCTTATTTGTTGTCATTA+GGG - chr6_4:9783918-9783937 Msa0975960:CDS 30.0%
!! TGCTTATTTGTTGTCATTAG+GGG - chr6_4:9783919-9783938 Msa0975960:CDS 30.0%
! AAAACCAAAAATGCCTTGTT+GGG + chr6_4:9783965-9783984 None:intergenic 30.0%
AAAAACCAAAAATGCCTTGT+TGG + chr6_4:9783966-9783985 None:intergenic 30.0%
!!! AACAAGGCATTTTTGGTTTT+TGG - chr6_4:9783965-9783984 Msa0975960:CDS 30.0%
GGTTTATTAGTGCTCTTAAA+GGG - chr6_4:9784098-9784117 Msa0975960:CDS 30.0%
AATTGATGTGTTGAGTGATT+TGG - chr6_4:9784123-9784142 Msa0975960:CDS 30.0%
TTGGAAAATGGTGTGTTAAA+TGG - chr6_4:9784142-9784161 Msa0975960:CDS 30.0%
AAATGGTGTGTTAAATGGTT+TGG - chr6_4:9784147-9784166 Msa0975960:CDS 30.0%
! GCAATCTAAAACATCTAGAA+CGG - chr6_4:9784189-9784208 Msa0975960:CDS 30.0%
AAATTATACACCTCAAACCT+AGG + chr6_4:9784250-9784269 None:intergenic 30.0%
GAAGTAACATCAACTTTCTT+AGG + chr6_4:9784292-9784311 None:intergenic 30.0%
TCAGGAAATAGGAATAATGA+TGG - chr6_4:9784340-9784359 Msa0975960:CDS 30.0%
AAAGAAAGTTAAGGGAAAAG+TGG + chr6_4:9783150-9783169 None:intergenic 30.0%
AGTGTGTCAAAGAAAGTTAA+GGG + chr6_4:9783158-9783177 None:intergenic 30.0%
TAGTGTGTCAAAGAAAGTTA+AGG + chr6_4:9783159-9783178 None:intergenic 30.0%
TAACTTTCTTTGACACACTA+TGG - chr6_4:9783159-9783178 Msa0975960:CDS 30.0%
! AAGAAGTGGTTGATACATTT+GGG + chr6_4:9783226-9783245 None:intergenic 30.0%
! AAAGAAGTGGTTGATACATT+TGG + chr6_4:9783227-9783246 None:intergenic 30.0%
AATGGAATCAAAGAAAGAAG+TGG + chr6_4:9783240-9783259 None:intergenic 30.0%
ATATGATGTTACCAACAAGA+AGG + chr6_4:9783310-9783329 None:intergenic 30.0%
!! TTCTTGTTGGTAACATCATA+TGG - chr6_4:9783309-9783328 Msa0975960:CDS 30.0%
TTTGACTCAGCTACAATTAA+GGG + chr6_4:9783386-9783405 None:intergenic 30.0%
ATTTGACTCAGCTACAATTA+AGG + chr6_4:9783387-9783406 None:intergenic 30.0%
AAAACAGTTAATCCCAAGTT+TGG - chr6_4:9783454-9783473 Msa0975960:CDS 30.0%
CATGTGAAATTTCCAAACTT+GGG + chr6_4:9783469-9783488 None:intergenic 30.0%
TCATGTGAAATTTCCAAACT+TGG + chr6_4:9783470-9783489 None:intergenic 30.0%
!!! TTTTTTCCTAACCATGGATT+TGG - chr6_4:9783521-9783540 Msa0975960:CDS 30.0%
TTATACCAATACCAAATCCA+TGG + chr6_4:9783535-9783554 None:intergenic 30.0%
! CAACTTTGTTTATGAATGCT+TGG - chr6_4:9783588-9783607 Msa0975960:CDS 30.0%
TCCATTATAAAAGACCCTTT+AGG - chr6_4:9783689-9783708 Msa0975960:CDS 30.0%
! TCCTAAAGGGTCTTTTATAA+TGG + chr6_4:9783693-9783712 None:intergenic 30.0%
AAAAAATGGATGAATGTTGG+TGG - chr6_4:9783731-9783750 Msa0975960:CDS 30.0%
ATAATCGAAGCTTAAAGGTT+TGG - chr6_4:9783762-9783781 Msa0975960:CDS 30.0%
!! TGTGCTTATTTGTTGTCATT+AGG - chr6_4:9783917-9783936 Msa0975960:CDS 30.0%
!! GTGCTTATTTGTTGTCATTA+GGG - chr6_4:9783918-9783937 Msa0975960:CDS 30.0%
!! TGCTTATTTGTTGTCATTAG+GGG - chr6_4:9783919-9783938 Msa0975960:CDS 30.0%
! AAAACCAAAAATGCCTTGTT+GGG + chr6_4:9783965-9783984 None:intergenic 30.0%
AAAAACCAAAAATGCCTTGT+TGG + chr6_4:9783966-9783985 None:intergenic 30.0%
!!! AACAAGGCATTTTTGGTTTT+TGG - chr6_4:9783965-9783984 Msa0975960:CDS 30.0%
GGTTTATTAGTGCTCTTAAA+GGG - chr6_4:9784098-9784117 Msa0975960:CDS 30.0%
AATTGATGTGTTGAGTGATT+TGG - chr6_4:9784123-9784142 Msa0975960:CDS 30.0%
TTGGAAAATGGTGTGTTAAA+TGG - chr6_4:9784142-9784161 Msa0975960:CDS 30.0%
AAATGGTGTGTTAAATGGTT+TGG - chr6_4:9784147-9784166 Msa0975960:CDS 30.0%
! GCAATCTAAAACATCTAGAA+CGG - chr6_4:9784189-9784208 Msa0975960:CDS 30.0%
AAATTATACACCTCAAACCT+AGG + chr6_4:9784250-9784269 None:intergenic 30.0%
GAAGTAACATCAACTTTCTT+AGG + chr6_4:9784292-9784311 None:intergenic 30.0%
TCAGGAAATAGGAATAATGA+TGG - chr6_4:9784340-9784359 Msa0975960:CDS 30.0%
! ACTCTGATAGATGTTGATGA+TGG + chr6_4:9783083-9783102 None:intergenic 35.0%
AAGTTAAGGGAAAAGTGGTT+GGG + chr6_4:9783145-9783164 None:intergenic 35.0%
AAAGTTAAGGGAAAAGTGGT+TGG + chr6_4:9783146-9783165 None:intergenic 35.0%
! GTGTTTGAGATTTGGAAGAA+TGG + chr6_4:9783258-9783277 None:intergenic 35.0%
!! TCAAGAGAGTGTTTGAGATT+TGG + chr6_4:9783266-9783285 None:intergenic 35.0%
TTAAGGGAATGGAATCACTA+GGG + chr6_4:9783370-9783389 None:intergenic 35.0%
ATTAAGGGAATGGAATCACT+AGG + chr6_4:9783371-9783390 None:intergenic 35.0%
!!! GTCACTTTTTTTCCTAACCA+TGG - chr6_4:9783515-9783534 Msa0975960:CDS 35.0%
!!! TAGAGGGTGTGTTTTTTTCA+AGG + chr6_4:9783631-9783650 None:intergenic 35.0%
!! AAAACCCAACAAGGCATTTT+TGG - chr6_4:9783958-9783977 Msa0975960:CDS 35.0%
!!! TGGTTTTTGGTGTTGATTGT+AGG - chr6_4:9783978-9783997 Msa0975960:CDS 35.0%
ATTAGTTGTGCATGAAACTG+AGG - chr6_4:9784057-9784076 Msa0975960:CDS 35.0%
GGGTTTATTAGTGCTCTTAA+AGG - chr6_4:9784097-9784116 Msa0975960:CDS 35.0%
! GTGTTGAGTGATTTGGAAAA+TGG - chr6_4:9784130-9784149 Msa0975960:CDS 35.0%
GGAAATAGGAATAATGATGG+TGG - chr6_4:9784343-9784362 Msa0975960:CDS 35.0%
!! AATGATGGTGGAATTGAGAT+TGG - chr6_4:9784355-9784374 Msa0975960:CDS 35.0%
GACTTTGAACAAGCAACAAA+TGG - chr6_4:9784381-9784400 Msa0975960:CDS 35.0%
TTTGAACAAGCAACAAATGG+AGG - chr6_4:9784384-9784403 Msa0975960:CDS 35.0%
! TTTGCTCGACTTTTTGTTCA+AGG - chr6_4:9784409-9784428 Msa0975960:CDS 35.0%
! ACTCTGATAGATGTTGATGA+TGG + chr6_4:9783083-9783102 None:intergenic 35.0%
AAGTTAAGGGAAAAGTGGTT+GGG + chr6_4:9783145-9783164 None:intergenic 35.0%
AAAGTTAAGGGAAAAGTGGT+TGG + chr6_4:9783146-9783165 None:intergenic 35.0%
! GTGTTTGAGATTTGGAAGAA+TGG + chr6_4:9783258-9783277 None:intergenic 35.0%
!! TCAAGAGAGTGTTTGAGATT+TGG + chr6_4:9783266-9783285 None:intergenic 35.0%
TTAAGGGAATGGAATCACTA+GGG + chr6_4:9783370-9783389 None:intergenic 35.0%
ATTAAGGGAATGGAATCACT+AGG + chr6_4:9783371-9783390 None:intergenic 35.0%
!!! GTCACTTTTTTTCCTAACCA+TGG - chr6_4:9783515-9783534 Msa0975960:CDS 35.0%
!!! TAGAGGGTGTGTTTTTTTCA+AGG + chr6_4:9783631-9783650 None:intergenic 35.0%
!! AAAACCCAACAAGGCATTTT+TGG - chr6_4:9783958-9783977 Msa0975960:CDS 35.0%
!!! TGGTTTTTGGTGTTGATTGT+AGG - chr6_4:9783978-9783997 Msa0975960:CDS 35.0%
ATTAGTTGTGCATGAAACTG+AGG - chr6_4:9784057-9784076 Msa0975960:CDS 35.0%
GGGTTTATTAGTGCTCTTAA+AGG - chr6_4:9784097-9784116 Msa0975960:CDS 35.0%
! GTGTTGAGTGATTTGGAAAA+TGG - chr6_4:9784130-9784149 Msa0975960:CDS 35.0%
GGAAATAGGAATAATGATGG+TGG - chr6_4:9784343-9784362 Msa0975960:CDS 35.0%
!! AATGATGGTGGAATTGAGAT+TGG - chr6_4:9784355-9784374 Msa0975960:CDS 35.0%
GACTTTGAACAAGCAACAAA+TGG - chr6_4:9784381-9784400 Msa0975960:CDS 35.0%
TTTGAACAAGCAACAAATGG+AGG - chr6_4:9784384-9784403 Msa0975960:CDS 35.0%
! TTTGCTCGACTTTTTGTTCA+AGG - chr6_4:9784409-9784428 Msa0975960:CDS 35.0%
AGTTAAGGGAAAAGTGGTTG+GGG + chr6_4:9783144-9783163 None:intergenic 40.0%
TAGAAGAAGAGACGTTCAAC+TGG + chr6_4:9783197-9783216 None:intergenic 40.0%
TGATGTTACCAACAAGAAGG+AGG + chr6_4:9783307-9783326 None:intergenic 40.0%
!! ACATAGTTGATGATGGGATG+TGG + chr6_4:9783347-9783366 None:intergenic 40.0%
!! CTAGGGACATAGTTGATGAT+GGG + chr6_4:9783353-9783372 None:intergenic 40.0%
!! ACTAGGGACATAGTTGATGA+TGG + chr6_4:9783354-9783373 None:intergenic 40.0%
CTCAGCTACAATTAAGGGAA+TGG + chr6_4:9783381-9783400 None:intergenic 40.0%
CCAATACCAAATCCATGGTT+AGG + chr6_4:9783530-9783549 None:intergenic 40.0%
! CCTAACCATGGATTTGGTAT+TGG - chr6_4:9783527-9783546 Msa0975960:CDS 40.0%
! ATTTTCCATCAACAGCTGCA+TGG + chr6_4:9783565-9783584 None:intergenic 40.0%
!!! GGGTGTGTTTTTTTCAAGGT+TGG + chr6_4:9783627-9783646 None:intergenic 40.0%
ACAAATGGTGAAGCAGTCAA+AGG - chr6_4:9783800-9783819 Msa0975960:CDS 40.0%
TGACCAACAAAAACCCAACA+AGG - chr6_4:9783949-9783968 Msa0975960:CDS 40.0%
!! ATGCCTTGTTGGGTTTTTGT+TGG + chr6_4:9783955-9783974 None:intergenic 40.0%
! TGTTGATTGTAGGTCACGTT+TGG - chr6_4:9783988-9784007 Msa0975960:CDS 40.0%
!! ACTGAGGCATTGTTAGAAGA+TGG - chr6_4:9784073-9784092 Msa0975960:CDS 40.0%
! AGGCATTGTTAGAAGATGGT+GGG - chr6_4:9784077-9784096 Msa0975960:CDS 40.0%
CCTGAAAGATAAAAAGCTCC+TGG + chr6_4:9784325-9784344 None:intergenic 40.0%
! CCAGGAGCTTTTTATCTTTC+AGG - chr6_4:9784322-9784341 Msa0975960:CDS 40.0%
AGTTAAGGGAAAAGTGGTTG+GGG + chr6_4:9783144-9783163 None:intergenic 40.0%
TAGAAGAAGAGACGTTCAAC+TGG + chr6_4:9783197-9783216 None:intergenic 40.0%
TGATGTTACCAACAAGAAGG+AGG + chr6_4:9783307-9783326 None:intergenic 40.0%
!! ACATAGTTGATGATGGGATG+TGG + chr6_4:9783347-9783366 None:intergenic 40.0%
!! CTAGGGACATAGTTGATGAT+GGG + chr6_4:9783353-9783372 None:intergenic 40.0%
!! ACTAGGGACATAGTTGATGA+TGG + chr6_4:9783354-9783373 None:intergenic 40.0%
CTCAGCTACAATTAAGGGAA+TGG + chr6_4:9783381-9783400 None:intergenic 40.0%
CCAATACCAAATCCATGGTT+AGG + chr6_4:9783530-9783549 None:intergenic 40.0%
! CCTAACCATGGATTTGGTAT+TGG - chr6_4:9783527-9783546 Msa0975960:CDS 40.0%
! ATTTTCCATCAACAGCTGCA+TGG + chr6_4:9783565-9783584 None:intergenic 40.0%
!!! GGGTGTGTTTTTTTCAAGGT+TGG + chr6_4:9783627-9783646 None:intergenic 40.0%
ACAAATGGTGAAGCAGTCAA+AGG - chr6_4:9783800-9783819 Msa0975960:CDS 40.0%
TGACCAACAAAAACCCAACA+AGG - chr6_4:9783949-9783968 Msa0975960:CDS 40.0%
!! ATGCCTTGTTGGGTTTTTGT+TGG + chr6_4:9783955-9783974 None:intergenic 40.0%
! TGTTGATTGTAGGTCACGTT+TGG - chr6_4:9783988-9784007 Msa0975960:CDS 40.0%
!! ACTGAGGCATTGTTAGAAGA+TGG - chr6_4:9784073-9784092 Msa0975960:CDS 40.0%
! AGGCATTGTTAGAAGATGGT+GGG - chr6_4:9784077-9784096 Msa0975960:CDS 40.0%
CCTGAAAGATAAAAAGCTCC+TGG + chr6_4:9784325-9784344 None:intergenic 40.0%
! CCAGGAGCTTTTTATCTTTC+AGG - chr6_4:9784322-9784341 Msa0975960:CDS 40.0%
! GTTGGGGAGGTTTCATTTTG+TGG + chr6_4:9783128-9783147 None:intergenic 45.0%
AAGAAGAGACGTTCAACTGG+TGG + chr6_4:9783194-9783213 None:intergenic 45.0%
AACCACTTCCTCCTTCTTGT+TGG - chr6_4:9783296-9783315 Msa0975960:CDS 45.0%
TACCAACAAGAAGGAGGAAG+TGG + chr6_4:9783301-9783320 None:intergenic 45.0%
ATGGGATGTGGTGAATCTTG+TGG + chr6_4:9783335-9783354 None:intergenic 45.0%
!! GAGGCATTGTTAGAAGATGG+TGG - chr6_4:9784076-9784095 Msa0975960:CDS 45.0%
TTTCTATTACCGGGTCACCT+AGG - chr6_4:9784230-9784249 Msa0975960:CDS 45.0%
!! GTTACTTCGGTTGATAGACC+AGG - chr6_4:9784304-9784323 Msa0975960:CDS 45.0%
! GTTGGGGAGGTTTCATTTTG+TGG + chr6_4:9783128-9783147 None:intergenic 45.0%
AAGAAGAGACGTTCAACTGG+TGG + chr6_4:9783194-9783213 None:intergenic 45.0%
AACCACTTCCTCCTTCTTGT+TGG - chr6_4:9783296-9783315 Msa0975960:CDS 45.0%
TACCAACAAGAAGGAGGAAG+TGG + chr6_4:9783301-9783320 None:intergenic 45.0%
ATGGGATGTGGTGAATCTTG+TGG + chr6_4:9783335-9783354 None:intergenic 45.0%
!! GAGGCATTGTTAGAAGATGG+TGG - chr6_4:9784076-9784095 Msa0975960:CDS 45.0%
TTTCTATTACCGGGTCACCT+AGG - chr6_4:9784230-9784249 Msa0975960:CDS 45.0%
!! GTTACTTCGGTTGATAGACC+AGG - chr6_4:9784304-9784323 Msa0975960:CDS 45.0%
TAAGGGAAAAGTGGTTGGGG+AGG + chr6_4:9783141-9783160 None:intergenic 50.0%
ATCAACAGCTGCATGGTGTG+TGG + chr6_4:9783558-9783577 None:intergenic 50.0%
ACACACCATGCAGCTGTTGA+TGG - chr6_4:9783557-9783576 Msa0975960:CDS 50.0%
TAAGGGAAAAGTGGTTGGGG+AGG + chr6_4:9783141-9783160 None:intergenic 50.0%
ATCAACAGCTGCATGGTGTG+TGG + chr6_4:9783558-9783577 None:intergenic 50.0%
ACACACCATGCAGCTGTTGA+TGG - chr6_4:9783557-9783576 Msa0975960:CDS 50.0%
TACCGGGTCACCTAGGTTTG+AGG - chr6_4:9784237-9784256 Msa0975960:CDS 55.0%
CACCTCAAACCTAGGTGACC+CGG + chr6_4:9784242-9784261 None:intergenic 55.0%
TACCGGGTCACCTAGGTTTG+AGG - chr6_4:9784237-9784256 Msa0975960:CDS 55.0%
CACCTCAAACCTAGGTGACC+CGG + chr6_4:9784242-9784261 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 9783068 9784447 9783068 ID=Msa0975960;Name=Msa0975960
chr6_4 mRNA 9783068 9784447 9783068 ID=Msa0975960-mRNA-1;Parent=Msa0975960;Name=Msa0975960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|459
chr6_4 exon 9783068 9784447 9783068 ID=Msa0975960-mRNA-1:exon:3566;Parent=Msa0975960-mRNA-1
chr6_4 CDS 9783068 9784447 9783068 ID=Msa0975960-mRNA-1:cds;Parent=Msa0975960-mRNA-1
Gene Sequence

>Msa0975960

ATGGCAACATTACCATCATCAACATCTATCAGAGTTCATAAAGTTCTTTCTATAGCACCACAAAATGAAACCTCCCCAACCACTTTTCCCTTAACTTTCTTTGACACACTATGGATAAGACAACCACCAGTTGAACGTCTCTTCTTCTATGAACTCCCAAATGTATCAACCACTTCTTTCTTTGATTCCATTCTTCCAAATCTCAAACACTCTCTTGAACTCACACTCAACCACTTCCTCCTTCTTGTTGGTAACATCATATGGCCACAAGATTCACCACATCCCATCATCAACTATGTCCCTAGTGATTCCATTCCCTTAATTGTAGCTGAGTCAAATGAAAATTTCAATCTCTTATGTTCCAATCTTTGTGAAGTTGAAAAAAGAAAACAGTTAATCCCAAGTTTGGAAATTTCACATGAAAAAGCATCAATTATTTCACTACAAGTCACTTTTTTTCCTAACCATGGATTTGGTATTGGTATAACCACACACCATGCAGCTGTTGATGGAAAATCTTCAACTTTGTTTATGAATGCTTGGTCTTATTTTTGTTCCAACCTTGAAAAAAACACACCCTCTATGTTTTTACCTCAAAATCTAACACCTTTTTTTGATAGGTCCATTATAAAAGACCCTTTAGGAATAAATGAAATTCATTCAAAAAAATGGATGAATGTTGGTGGAGAAACAAATAATCGAAGCTTAAAGGTTTGGAAAACAATAAGTGCAACAAATGGTGAAGCAGTCAAAGGTTTGTTTGAATTATCACCTTTGGATATTCAAAAGCTTAAGAAATATGCACAATCTAAGGTTGAAAATAAAAAGGTTTCAACTTTTGCGGTTACATGTGCTTATTTGTTGTCATTAGGGGTTAAAGTTGACCAACAAAAACCCAACAAGGCATTTTTGGTTTTTGGTGTTGATTGTAGGTCACGTTTGGATCCACCAATTAATGCAAATTATTTTGGGAATTGTATTGTGTCAAGATTAGTTGTGCATGAAACTGAGGCATTGTTAGAAGATGGTGGGTTTATTAGTGCTCTTAAAGGGATAATTGATGTGTTGAGTGATTTGGAAAATGGTGTGTTAAATGGTTTGGAAAATTGGATGTCAATGATGCAATCTAAAACATCTAGAACGGATGAGACTTATAAGATTTTTTCTATTACCGGGTCACCTAGGTTTGAGGTGTATAATTTTGATTTTGGGTGGGGTAAGCCTAAGAAAGTTGATGTTACTTCGGTTGATAGACCAGGAGCTTTTTATCTTTCAGGAAATAGGAATAATGATGGTGGAATTGAGATTGGTTTGACTTTGAACAAGCAACAAATGGAGGTTTTTGCTCGACTTTTTGTTCAAGGACTTGAATCCTTGTAA

Protein sequence

>Msa0975960

MATLPSSTSIRVHKVLSIAPQNETSPTTFPLTFFDTLWIRQPPVERLFFYELPNVSTTSFFDSILPNLKHSLELTLNHFLLLVGNIIWPQDSPHPIINYVPSDSIPLIVAESNENFNLLCSNLCEVEKRKQLIPSLEISHEKASIISLQVTFFPNHGFGIGITTHHAAVDGKSSTLFMNAWSYFCSNLEKNTPSMFLPQNLTPFFDRSIIKDPLGINEIHSKKWMNVGGETNNRSLKVWKTISATNGEAVKGLFELSPLDIQKLKKYAQSKVENKKVSTFAVTCAYLLSLGVKVDQQKPNKAFLVFGVDCRSRLDPPINANYFGNCIVSRLVVHETEALLEDGGFISALKGIIDVLSDLENGVLNGLENWMSMMQSKTSRTDETYKIFSITGSPRFEVYNFDFGWGKPKKVDVTSVDRPGAFYLSGNRNNDGGIEIGLTLNKQQMEVFARLFVQGLESL*