AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331570 MtrunA17_Chr4g0056891 98.276 232 4 0 4 235 1 232 1.54e-170 468
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331570 AT1G62850.2 66.518 224 63 4 16 235 20 235 6.30e-94 275
Msa1331570 AT1G62850.3 66.518 224 63 4 16 235 20 235 6.30e-94 275
Msa1331570 AT1G62850.4 66.667 195 53 4 16 206 20 206 2.34e-80 239

Find 93 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTAATACTACCATAAT+TGG 0.127862 8_4:+51135575 Msa1331570:three_prime_UTR
TCCAATTATGGTAGTATTAA+AGG 0.179603 8_4:-51135576 None:intergenic
GATAGATAGTTTAAAGATTC+TGG 0.203643 8_4:-51135422 None:intergenic
GCTTCCTCAGCTTCAGATTC+TGG 0.206596 8_4:+51130503 Msa1331570:CDS
TAGATCGATGTTCGGCTTCT+TGG 0.249968 8_4:-51130571 None:intergenic
AAACTTCTGTGTTCTAGTTT+TGG 0.258270 8_4:-51133771 None:intergenic
ATGTATGATGTATCCAATTA+TGG 0.303636 8_4:-51135588 None:intergenic
GGATGCTTTGGCAAAGCTTC+AGG 0.322950 8_4:+51133891 Msa1331570:CDS
TGCTCTTCTGAGGGAGGTGG+TGG 0.329151 8_4:-51135131 None:intergenic
GAATTCGACATGTGTCTTTA+CGG 0.331461 8_4:+51135828 Msa1331570:three_prime_UTR
AATGTTACCTTCACTTGATA+AGG 0.333324 8_4:+51135980 Msa1331570:three_prime_UTR
AAGCAATGTACTACTGGAAT+TGG 0.353382 8_4:-51135941 None:intergenic
ATTAATGTTGTTTGAATCCT+TGG 0.353412 8_4:-51135648 None:intergenic
TTTGTACTTGGGAGAAGGTT+GGG 0.373564 8_4:+51135882 Msa1331570:three_prime_UTR
GTTAAAGAAATATTTATGTT+TGG 0.375505 8_4:-51136116 None:intergenic
GTCAGCTTAAGCCGCAATTA+CGG 0.379476 8_4:+51135805 Msa1331570:three_prime_UTR
ACCTTCACTTGATAAGGGTT+TGG 0.380483 8_4:+51135986 Msa1331570:three_prime_UTR
TCAGCTTAAGCCGCAATTAC+GGG 0.387371 8_4:+51135806 Msa1331570:three_prime_UTR
CTTCCTCAGCTTCAGATTCT+GGG 0.393020 8_4:+51130504 Msa1331570:CDS
CCCATTCCTAAAATCACTTT+GGG 0.395822 8_4:+51130614 Msa1331570:CDS
TGAAGAGAGGAGAGGAAGAA+AGG 0.398042 8_4:-51130443 None:intergenic
CCCCATTCCTAAAATCACTT+TGG 0.402112 8_4:+51130613 Msa1331570:CDS
ATGTTACCTTCACTTGATAA+GGG 0.403161 8_4:+51135981 Msa1331570:three_prime_UTR
AATTCGACATGTGTCTTTAC+GGG 0.406954 8_4:+51135829 Msa1331570:three_prime_UTR
TGAAACAAAACTTGGATGTA+TGG 0.414686 8_4:+51130317 Msa1331570:exon
ATAGTAAAGCAATGTACTAC+TGG 0.416302 8_4:-51135947 None:intergenic
AGAGGAAGAAAGGGCGAGAA+AGG 0.436039 8_4:-51130433 None:intergenic
GAAGGTTGGGATTGTGGACG+TGG 0.441007 8_4:+51130286 Msa1331570:five_prime_UTR
GAAGAGAGGAGAGGAAGAAA+GGG 0.445403 8_4:-51130442 None:intergenic
AAAGAAGAAGTAAAAGTAGT+TGG 0.447871 8_4:+51135382 Msa1331570:CDS
CGGCTTCTTGGAGAAGCTCA+TGG 0.448424 8_4:-51130559 None:intergenic
ATTGGCTAAGTGAAAGGGTC+AGG 0.448821 8_4:+51132948 Msa1331570:CDS
GGGTAACATTGAGGATGCTT+TGG 0.448922 8_4:+51133879 Msa1331570:CDS
AAAAGAAAAGAAAGAAGGTT+GGG 0.449210 8_4:+51130273 Msa1331570:five_prime_UTR
GAAAAGAAAAGAAAGAAGGT+TGG 0.452513 8_4:+51130272 Msa1331570:five_prime_UTR
CAGGGAGAAGATTATGCAAA+TGG 0.463990 8_4:+51132967 Msa1331570:CDS
AAGAAAGAAGGTTGGGATTG+TGG 0.466490 8_4:+51130280 Msa1331570:five_prime_UTR
GAGCTACGATTTAATGCAAT+AGG 0.468093 8_4:+51135731 Msa1331570:three_prime_UTR
AAGAAGAAGTAAAAGTAGTT+GGG 0.476573 8_4:+51135383 Msa1331570:CDS
GAGACGTTTGTGCTCTCCTA+TGG 0.480721 8_4:-51135325 None:intergenic
TTTAAACCTGAAACAAAACT+TGG 0.487818 8_4:+51130309 Msa1331570:five_prime_UTR
ACATCATGACATCAGATGAT+TGG 0.489650 8_4:+51135613 Msa1331570:three_prime_UTR
GTAATGCCAAGAAGAGAAGA+AGG 0.499941 8_4:-51130404 None:intergenic
GTCGACATGCGGTTCAATGT+TGG 0.505525 8_4:+51132917 Msa1331570:CDS
AAAAGAAAAGAAAAGAAAGA+AGG 0.508611 8_4:+51130268 Msa1331570:five_prime_UTR
TTGTAGATAAAAGCAACATA+TGG 0.511382 8_4:-51135773 None:intergenic
CAAAACTTGGATGTATGGTA+TGG 0.514654 8_4:+51130322 Msa1331570:exon
GGCTTCAACAACCACTAGAA+TGG 0.521120 8_4:+51130343 Msa1331570:CDS
ATGCAGCAATAAAACCACTT+TGG 0.530385 8_4:-51135686 None:intergenic
TTTCTTCAGGGGTAACATTG+AGG 0.534771 8_4:+51133870 Msa1331570:intron
GCTCTTCTGAGGGAGGTGGT+GGG 0.534879 8_4:-51135130 None:intergenic
GCGCATCGAATTGCAGTGGC+GGG 0.539361 8_4:-51130482 None:intergenic
AGTATCCTCTCGGCTTTCGC+AGG 0.539470 8_4:+51130535 Msa1331570:CDS
AGCGGAGATAGATCGATGTT+CGG 0.541156 8_4:-51130579 None:intergenic
ATTGAACCGCATGTCGACCT+TGG 0.541896 8_4:-51132912 None:intergenic
TTTGCCAGAAGTGGAGGACC+TGG 0.545145 8_4:+51130753 Msa1331570:CDS
GGCACATTGGCTAAGTGAAA+GGG 0.546502 8_4:+51132943 Msa1331570:CDS
TATTCCTTTCACCATTCTAG+TGG 0.547459 8_4:-51130354 None:intergenic
CACTTCTGTAGGGCTGCCAT+AGG 0.548523 8_4:+51135309 Msa1331570:intron
AAAATCGTATGAACAAGGAT+GGG 0.550226 8_4:+51133729 Msa1331570:CDS
TGCCAGAAGTGGAGGACCTG+GGG 0.553451 8_4:+51130755 Msa1331570:CDS
AGGCACATTGGCTAAGTGAA+AGG 0.561094 8_4:+51132942 Msa1331570:CDS
TTGCCAGAAGTGGAGGACCT+GGG 0.565073 8_4:+51130754 Msa1331570:CDS
TACGGGAAGTCAACAACCCT+GGG 0.571478 8_4:+51135846 Msa1331570:three_prime_UTR
AACAACATTAATCAACATGA+AGG 0.575498 8_4:+51135659 Msa1331570:three_prime_UTR
GCCAAACCCTTATCAAGTGA+AGG 0.576756 8_4:-51135987 None:intergenic
CTATCAGAAACTAAATCACA+AGG 0.584249 8_4:-51135907 None:intergenic
TAATGCCAAGAAGAGAAGAA+GGG 0.585098 8_4:-51130403 None:intergenic
CATGCGGTTCAATGTTGGAA+AGG 0.591093 8_4:+51132922 Msa1331570:CDS
ATGTCGAATTCCCGTAATTG+CGG 0.592225 8_4:-51135816 None:intergenic
AGTGTTGGTCAAATTTGTGA+TGG 0.593127 8_4:+51135709 Msa1331570:three_prime_UTR
AGCGCATCGAATTGCAGTGG+CGG 0.596376 8_4:-51130483 None:intergenic
GGAACAACAAAGTATCCTCT+CGG 0.606425 8_4:+51130525 Msa1331570:CDS
CAAACGTCTCAAAAGCAAGA+AGG 0.607475 8_4:+51135338 Msa1331570:CDS
TTACGGGAAGTCAACAACCC+TGG 0.618750 8_4:+51135845 Msa1331570:three_prime_UTR
TCAATGTTGGAAAGGCACAT+TGG 0.618902 8_4:+51132930 Msa1331570:CDS
AAATCGTATGAACAAGGATG+GGG 0.621165 8_4:+51133730 Msa1331570:CDS
GTTCCCAGAATCTGAAGCTG+AGG 0.628074 8_4:-51130507 None:intergenic
AATGCCAAGAAGAGAAGAAG+GGG 0.634269 8_4:-51130402 None:intergenic
TTGGCTAAGTGAAAGGGTCA+GGG 0.636328 8_4:+51132949 Msa1331570:CDS
CGAGCGCTGTAATTGAAGAG+AGG 0.641440 8_4:-51130456 None:intergenic
ACAACCACTAGAATGGTGAA+AGG 0.641721 8_4:+51130350 Msa1331570:CDS
GCCAGAAGTGGAGGACCTGG+GGG 0.642506 8_4:+51130756 Msa1331570:CDS
AACATGAAGGATATCCAAAG+TGG 0.646604 8_4:+51135672 Msa1331570:three_prime_UTR
ATTGGTTGAAGATATAACCA+AGG 0.657210 8_4:+51135631 Msa1331570:three_prime_UTR
AATTGCGGCTTAAGCTGACA+AGG 0.663038 8_4:-51135801 None:intergenic
TATCAGAAACTAAATCACAA+GGG 0.677403 8_4:-51135906 None:intergenic
GCTGTAATTGAAGAGAGGAG+AGG 0.684565 8_4:-51130451 None:intergenic
GGAAGCGCATCGAATTGCAG+TGG 0.684620 8_4:-51130486 None:intergenic
ATGGACCTGCGAAAGCCGAG+AGG 0.719112 8_4:-51130540 None:intergenic
TGAACACCAAGGTCGACATG+CGG 0.719333 8_4:+51132906 Msa1331570:CDS
ATGCCAAGAAGAGAAGAAGG+GGG 0.741371 8_4:-51130401 None:intergenic
TGATTGTACAGTGAACACCA+AGG 0.820851 8_4:+51132895 Msa1331570:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATATATATATATATTCA+AGG - chr8_4:51130669-51130688 None:intergenic 10.0%
!! TATAGAAAAAAAATATTAGA+TGG + chr8_4:51133304-51133323 Msa1331570:intron 10.0%
!! AATATGTTTCTTATAAATAA+TGG - chr8_4:51133569-51133588 None:intergenic 10.0%
!! TTTATAAGAAACATATTTAT+AGG + chr8_4:51133572-51133591 Msa1331570:intron 10.0%
!!! TGATTTTTATATAGTTTTGT+TGG + chr8_4:51130706-51130725 Msa1331570:intron 15.0%
!!! GATTTTTATATAGTTTTGTT+GGG + chr8_4:51130707-51130726 Msa1331570:intron 15.0%
!!! AATTCATTTTATAAGGTATT+AGG + chr8_4:51130850-51130869 Msa1331570:intron 15.0%
!! TAAAATAAATCAATCTTCAA+AGG + chr8_4:51131082-51131101 Msa1331570:intron 15.0%
!!! TATCTAATGTAAATTTTGTA+GGG + chr8_4:51132496-51132515 Msa1331570:intron 15.0%
!! TAGTTAAATTTCATACAAAA+TGG + chr8_4:51133147-51133166 Msa1331570:intron 15.0%
!! AGTTAAATTTCATACAAAAT+GGG + chr8_4:51133148-51133167 Msa1331570:intron 15.0%
!! TATTTATAGAGAAAAAGAAA+GGG - chr8_4:51133397-51133416 None:intergenic 15.0%
!! ATATTTATAGAGAAAAAGAA+AGG - chr8_4:51133398-51133417 None:intergenic 15.0%
!! ATAAATATTTGTAAGCTAAT+AGG + chr8_4:51133410-51133429 Msa1331570:intron 15.0%
!! TAAATATTTGTAAGCTAATA+GGG + chr8_4:51133411-51133430 Msa1331570:intron 15.0%
!! AATACAAAAATTCAATAGAA+GGG - chr8_4:51133804-51133823 None:intergenic 15.0%
!! AAATACAAAAATTCAATAGA+AGG - chr8_4:51133805-51133824 None:intergenic 15.0%
!! CATATAATTATAACTTCAAA+GGG - chr8_4:51134904-51134923 None:intergenic 15.0%
!! ACATATAATTATAACTTCAA+AGG - chr8_4:51134905-51134924 None:intergenic 15.0%
!! TTAAAATACGGTTTATTATT+TGG + chr8_4:51135221-51135240 Msa1331570:intron 15.0%
!!! TTTTATTAATTCAACTGTTT+TGG + chr8_4:51136056-51136075 Msa1331570:three_prime_UTR 15.0%
!! GTTAAAGAAATATTTATGTT+TGG - chr8_4:51136119-51136138 None:intergenic 15.0%
!! AAAAGAAAAGAAAAGAAAGA+AGG + chr8_4:51130268-51130287 Msa1331570:five_prime_UTR 20.0%
!!! GTGTAAGAATTCATTTTATA+AGG + chr8_4:51130843-51130862 Msa1331570:intron 20.0%
!! TTAATTCAACATGATATACA+AGG - chr8_4:51130900-51130919 None:intergenic 20.0%
!! GAAAAAAATCTTAATAGCTA+AGG + chr8_4:51130934-51130953 Msa1331570:intron 20.0%
!! AAATACTTTAAACATCTTGA+AGG + chr8_4:51131300-51131319 Msa1331570:intron 20.0%
!! AAAACATTCATAAATAACAG+AGG + chr8_4:51131662-51131681 Msa1331570:intron 20.0%
!! AAACATTCATAAATAACAGA+GGG + chr8_4:51131663-51131682 Msa1331570:intron 20.0%
!! TATAATTGTTGAGAAAAAAG+TGG + chr8_4:51131752-51131771 Msa1331570:intron 20.0%
!!! CTATTTTAAGTTTTTTTGCT+TGG + chr8_4:51132022-51132041 Msa1331570:intron 20.0%
!! TCAATTTAAACTGATATGAA+GGG - chr8_4:51132185-51132204 None:intergenic 20.0%
!!! TTTTGTAATTTGTAGGATTA+TGG - chr8_4:51132456-51132475 None:intergenic 20.0%
!! CAAAATTTACATTAGATACA+GGG - chr8_4:51132494-51132513 None:intergenic 20.0%
!! ACAAAATTTACATTAGATAC+AGG - chr8_4:51132495-51132514 None:intergenic 20.0%
!!! GTATCTAATGTAAATTTTGT+AGG + chr8_4:51132495-51132514 Msa1331570:intron 20.0%
!!! ATCTAATGTAAATTTTGTAG+GGG + chr8_4:51132497-51132516 Msa1331570:intron 20.0%
!!! TATTTTTTTTCATTGTATGC+TGG + chr8_4:51133820-51133839 Msa1331570:intron 20.0%
!!! ACTGAAGTATTTAAGTTTTA+AGG - chr8_4:51133990-51134009 None:intergenic 20.0%
!!! TTTAAAATGCCACTATTATT+GGG - chr8_4:51134121-51134140 None:intergenic 20.0%
!!! ATTTAAAATGCCACTATTAT+TGG - chr8_4:51134122-51134141 None:intergenic 20.0%
!!! TTCTATTACTTATTTTTCTC+TGG + chr8_4:51134214-51134233 Msa1331570:intron 20.0%
!!! TAGAATTTGATTTACTATGA+GGG - chr8_4:51134380-51134399 None:intergenic 20.0%
!!! TTAGAATTTGATTTACTATG+AGG - chr8_4:51134381-51134400 None:intergenic 20.0%
!!! AAATCAAATTCTAAGAGTTT+TGG + chr8_4:51134387-51134406 Msa1331570:intron 20.0%
!!! ATTCTTGATTGAAGTATTAA+AGG + chr8_4:51134464-51134483 Msa1331570:intron 20.0%
!! TTCTTCTTTACTATCTATAT+TGG + chr8_4:51134515-51134534 Msa1331570:intron 20.0%
!! TAATTATATGTAACTCTTTG+TGG + chr8_4:51134914-51134933 Msa1331570:intron 20.0%
!! TGTAATTGAAAAGGAATTAA+GGG - chr8_4:51135005-51135024 None:intergenic 20.0%
!!! TGTTTTGAAAGATATAACAA+TGG + chr8_4:51135048-51135067 Msa1331570:intron 20.0%
!! ATACATATTCTTTATTCTTC+AGG + chr8_4:51135198-51135217 Msa1331570:intron 20.0%
!!! TTATTCTTCAGGTTAAAATA+CGG + chr8_4:51135209-51135228 Msa1331570:intron 20.0%
!! AGAATGACATAAAAGAAATT+TGG - chr8_4:51135506-51135525 None:intergenic 20.0%
! AAAAGAAAAGAAAGAAGGTT+GGG + chr8_4:51130273-51130292 Msa1331570:five_prime_UTR 25.0%
! TTTAAACCTGAAACAAAACT+TGG + chr8_4:51130309-51130328 Msa1331570:five_prime_UTR 25.0%
!!! GTCTATGTTTTTTTTGCTTA+AGG + chr8_4:51130821-51130840 Msa1331570:intron 25.0%
! TTAAAACTCAATTGAAGCTA+CGG - chr8_4:51130986-51131005 None:intergenic 25.0%
! ATTAAATCAGGTAAAAGCTA+CGG - chr8_4:51131022-51131041 None:intergenic 25.0%
!! ATGATTTCAGTAGAATGTTT+TGG + chr8_4:51131552-51131571 Msa1331570:intron 25.0%
! ATAGCTAAGAAAATCAACAT+GGG - chr8_4:51132006-51132025 None:intergenic 25.0%
! AATAGCTAAGAAAATCAACA+TGG - chr8_4:51132007-51132026 None:intergenic 25.0%
! GTTCATGAATACATAAGTAA+AGG - chr8_4:51132085-51132104 None:intergenic 25.0%
! GTCAATTTAAACTGATATGA+AGG - chr8_4:51132186-51132205 None:intergenic 25.0%
! ACTAAGTTGTTTATCCAAAT+AGG + chr8_4:51132430-51132449 Msa1331570:intron 25.0%
!! ATTCGTTTTATATCCATGTT+GGG + chr8_4:51132538-51132557 Msa1331570:intron 25.0%
!! TTTAAGTTATTAACTGCAAG+TGG - chr8_4:51132862-51132881 None:intergenic 25.0%
! AATTTATGACTCTTTACCTA+CGG - chr8_4:51133443-51133462 None:intergenic 25.0%
! ACATAAACCTTAACTTTGTA+CGG + chr8_4:51133540-51133559 Msa1331570:intron 25.0%
! TTATTCTTTCCCAATAATAG+TGG + chr8_4:51134109-51134128 Msa1331570:intron 25.0%
!!! TATTACTTATTTTTCTCTGG+TGG + chr8_4:51134217-51134236 Msa1331570:intron 25.0%
!! TCATTCATTTTCTTCATTCT+CGG + chr8_4:51134349-51134368 Msa1331570:intron 25.0%
!!! ACTTTTGTTATAAAGACAGT+AGG - chr8_4:51134582-51134601 None:intergenic 25.0%
!!! CTTTTCTTTGAGGAAATTAT+TGG - chr8_4:51134729-51134748 None:intergenic 25.0%
! AAATGGATCTTATATTAAGG+GGG - chr8_4:51134807-51134826 None:intergenic 25.0%
! GAAATGGATCTTATATTAAG+GGG - chr8_4:51134808-51134827 None:intergenic 25.0%
! GGAAATGGATCTTATATTAA+GGG - chr8_4:51134809-51134828 None:intergenic 25.0%
! TGGAAATGGATCTTATATTA+AGG - chr8_4:51134810-51134829 None:intergenic 25.0%
! GTAATTGAAAAGGAATTAAG+GGG - chr8_4:51135004-51135023 None:intergenic 25.0%
! GTGTAATTGAAAAGGAATTA+AGG - chr8_4:51135006-51135025 None:intergenic 25.0%
!! TGCTTTTCTGTTTATGAAAT+GGG + chr8_4:51135071-51135090 Msa1331570:intron 25.0%
! TTATGAAATGGGGAAAAAAT+AGG + chr8_4:51135082-51135101 Msa1331570:intron 25.0%
! AAAGAAGAAGTAAAAGTAGT+TGG + chr8_4:51135382-51135401 Msa1331570:CDS 25.0%
! AAGAAGAAGTAAAAGTAGTT+GGG + chr8_4:51135383-51135402 Msa1331570:CDS 25.0%
! GATAGATAGTTTAAAGATTC+TGG - chr8_4:51135425-51135444 None:intergenic 25.0%
!! AAAAGAAATTTGGTAATAGC+AGG - chr8_4:51135496-51135515 None:intergenic 25.0%
! TCCTTTAATACTACCATAAT+TGG + chr8_4:51135575-51135594 Msa1331570:three_prime_UTR 25.0%
! TCCAATTATGGTAGTATTAA+AGG - chr8_4:51135579-51135598 None:intergenic 25.0%
! ATGTATGATGTATCCAATTA+TGG - chr8_4:51135591-51135610 None:intergenic 25.0%
!! ATTAATGTTGTTTGAATCCT+TGG - chr8_4:51135651-51135670 None:intergenic 25.0%
! AACAACATTAATCAACATGA+AGG + chr8_4:51135659-51135678 Msa1331570:three_prime_UTR 25.0%
! TTGTAGATAAAAGCAACATA+TGG - chr8_4:51135776-51135795 None:intergenic 25.0%
! TATCAGAAACTAAATCACAA+GGG - chr8_4:51135909-51135928 None:intergenic 25.0%
GAAAAGAAAAGAAAGAAGGT+TGG + chr8_4:51130272-51130291 Msa1331570:five_prime_UTR 30.0%
!!! ATACATCCAAGTTTTGTTTC+AGG - chr8_4:51130318-51130337 None:intergenic 30.0%
TGAAACAAAACTTGGATGTA+TGG + chr8_4:51130317-51130336 Msa1331570:exon 30.0%
TCAAGGAATGAGAAAATTGA+TGG - chr8_4:51130652-51130671 None:intergenic 30.0%
GGAGTAGAAATCATATAGAA+AGG + chr8_4:51130871-51130890 Msa1331570:intron 30.0%
AATAGCTAAGGAAATCAACA+TGG + chr8_4:51130946-51130965 Msa1331570:intron 30.0%
ATAGCTAAGGAAATCAACAT+GGG + chr8_4:51130947-51130966 Msa1331570:intron 30.0%
!!! TTGAGTTTTAAGACATTTCC+TGG + chr8_4:51130995-51131014 Msa1331570:intron 30.0%
GCAATGTTGGAAATTAAATC+AGG - chr8_4:51131034-51131053 None:intergenic 30.0%
GTTGAAGATGCTTGATATAA+GGG - chr8_4:51131059-51131078 None:intergenic 30.0%
AGTTGAAGATGCTTGATATA+AGG - chr8_4:51131060-51131079 None:intergenic 30.0%
GTATTTGTAGAGTAACAAAG+TGG - chr8_4:51131286-51131305 None:intergenic 30.0%
! AAATGCTTTAAACGTCTTGA+AGG - chr8_4:51131615-51131634 None:intergenic 30.0%
ACAAACATCTTTGAGCAATA+TGG + chr8_4:51131704-51131723 Msa1331570:intron 30.0%
TAGAACAACTCAATCTTCAA+AGG - chr8_4:51131817-51131836 None:intergenic 30.0%
! TACAAGTTGAAGAAGATGTT+TGG + chr8_4:51131835-51131854 Msa1331570:intron 30.0%
! ACAAGTTGAAGAAGATGTTT+GGG + chr8_4:51131836-51131855 Msa1331570:intron 30.0%
CATGAATACATAAGTAAAGG+AGG - chr8_4:51132082-51132101 None:intergenic 30.0%
ACTTATTAGAGCTTATGTAC+TGG + chr8_4:51132204-51132223 Msa1331570:intron 30.0%
TTTGGATAAACAACTTAGTG+AGG - chr8_4:51132429-51132448 None:intergenic 30.0%
!!! CATGTGGTTTTGTAATTTGT+AGG - chr8_4:51132463-51132482 None:intergenic 30.0%
CAACATGGATATAAAACGAA+TGG - chr8_4:51132539-51132558 None:intergenic 30.0%
! CATTCGTTTTATATCCATGT+TGG + chr8_4:51132537-51132556 Msa1331570:intron 30.0%
TGTGTGTATTGTGATATGAT+AGG + chr8_4:51132577-51132596 Msa1331570:intron 30.0%
ATTGTGATATGATAGGAAAC+TGG + chr8_4:51132584-51132603 Msa1331570:intron 30.0%
GACTTTCTGTTATAGAAGAA+AGG + chr8_4:51132679-51132698 Msa1331570:intron 30.0%
TCTGTTATAGAAGAAAGGAT+AGG + chr8_4:51132684-51132703 Msa1331570:intron 30.0%
CTGTTATAGAAGAAAGGATA+GGG + chr8_4:51132685-51132704 Msa1331570:intron 30.0%
TGTTATAGAAGAAAGGATAG+GGG + chr8_4:51132686-51132705 Msa1331570:intron 30.0%
!! AGAGTTGTTTAGAGTCATTT+TGG + chr8_4:51132728-51132747 Msa1331570:intron 30.0%
AAACAGTCAATCACATGATT+TGG - chr8_4:51133023-51133042 None:intergenic 30.0%
!!! AGTATTTTAGGTTTGAAGCA+GGG - chr8_4:51133190-51133209 None:intergenic 30.0%
CTCAAGTTAAAGCACATTAT+TGG - chr8_4:51133245-51133264 None:intergenic 30.0%
TGTAAACAATGTTAGTCATG+AGG - chr8_4:51133523-51133542 None:intergenic 30.0%
ACCATTTGTGTATATCTAGT+TGG + chr8_4:51133626-51133645 Msa1331570:intron 30.0%
CCATTTGTGTATATCTAGTT+GGG + chr8_4:51133627-51133646 Msa1331570:intron 30.0%
TCTTGAATTGTATTGTTCCT+TGG + chr8_4:51133699-51133718 Msa1331570:intron 30.0%
AAAAATCGTATGAACAAGGA+TGG + chr8_4:51133728-51133747 Msa1331570:CDS 30.0%
AAAATCGTATGAACAAGGAT+GGG + chr8_4:51133729-51133748 Msa1331570:CDS 30.0%
!!! AAACTTCTGTGTTCTAGTTT+TGG - chr8_4:51133774-51133793 None:intergenic 30.0%
AAAATTCAATAGAAGGGAAG+AGG - chr8_4:51133798-51133817 None:intergenic 30.0%
TGAAGAAAAATCGCAGAATA+AGG - chr8_4:51133858-51133877 None:intergenic 30.0%
! TTATTCTGCGATTTTTCTTC+AGG + chr8_4:51133857-51133876 Msa1331570:intron 30.0%
! TATTCTGCGATTTTTCTTCA+GGG + chr8_4:51133858-51133877 Msa1331570:intron 30.0%
!! TCTTGATAGTGAACAAACTA+GGG + chr8_4:51134294-51134313 Msa1331570:intron 30.0%
! CATTCATTTTCTTCATTCTC+GGG + chr8_4:51134350-51134369 Msa1331570:intron 30.0%
!!! ACTATTTTTATGATTCTCCG+AGG + chr8_4:51134415-51134434 Msa1331570:intron 30.0%
TATTAAAGGACTTCGCAAAT+TGG + chr8_4:51134478-51134497 Msa1331570:intron 30.0%
AAGTCCATAGTCTACTTATT+TGG + chr8_4:51134598-51134617 Msa1331570:intron 30.0%
! TTTTCCTTCTCTTTAATCCT+TGG - chr8_4:51134630-51134649 None:intergenic 30.0%
AGGATTAAAGAGAAGGAAAA+TGG + chr8_4:51134630-51134649 Msa1331570:intron 30.0%
GGATTAAAGAGAAGGAAAAT+GGG + chr8_4:51134631-51134650 Msa1331570:intron 30.0%
GATTAAAGAGAAGGAAAATG+GGG + chr8_4:51134632-51134651 Msa1331570:intron 30.0%
AATGGATCTTATATTAAGGG+GGG - chr8_4:51134806-51134825 None:intergenic 30.0%
AACACTTTCTTACCATAAAG+GGG - chr8_4:51134853-51134872 None:intergenic 30.0%
CAACACTTTCTTACCATAAA+GGG - chr8_4:51134854-51134873 None:intergenic 30.0%
TCAACACTTTCTTACCATAA+AGG - chr8_4:51134855-51134874 None:intergenic 30.0%
ATTATAACTTCAAAGGGAAG+AGG - chr8_4:51134898-51134917 None:intergenic 30.0%
CTAAGTCTGTGTAATTGAAA+AGG - chr8_4:51135014-51135033 None:intergenic 30.0%
! GTGCTTTTCTGTTTATGAAA+TGG + chr8_4:51135070-51135089 Msa1331570:intron 30.0%
! GCTTTTCTGTTTATGAAATG+GGG + chr8_4:51135072-51135091 Msa1331570:intron 30.0%
TGTTAGCATTAGAATTACCA+AGG + chr8_4:51135266-51135285 Msa1331570:intron 30.0%
GTTAGCATTAGAATTACCAA+GGG + chr8_4:51135267-51135286 Msa1331570:intron 30.0%
CTTAGTAAGTTCGTGATTAT+TGG + chr8_4:51135447-51135466 Msa1331570:intron 30.0%
!! AATGTGTTACTTGAATCTCT+TGG + chr8_4:51135531-51135550 Msa1331570:intron 30.0%
ATTGGTTGAAGATATAACCA+AGG + chr8_4:51135631-51135650 Msa1331570:three_prime_UTR 30.0%
!! AACATGTCCATTTTTGTACT+TGG + chr8_4:51135870-51135889 Msa1331570:three_prime_UTR 30.0%
!! ACATGTCCATTTTTGTACTT+GGG + chr8_4:51135871-51135890 Msa1331570:three_prime_UTR 30.0%
CTATCAGAAACTAAATCACA+AGG - chr8_4:51135910-51135929 None:intergenic 30.0%
ATAGTAAAGCAATGTACTAC+TGG - chr8_4:51135950-51135969 None:intergenic 30.0%
AATGTTACCTTCACTTGATA+AGG + chr8_4:51135980-51135999 Msa1331570:three_prime_UTR 30.0%
ATGTTACCTTCACTTGATAA+GGG + chr8_4:51135981-51136000 Msa1331570:three_prime_UTR 30.0%
CAAAACTTGGATGTATGGTA+TGG + chr8_4:51130322-51130341 Msa1331570:exon 35.0%
TATTCCTTTCACCATTCTAG+TGG - chr8_4:51130357-51130376 None:intergenic 35.0%
TAATGCCAAGAAGAGAAGAA+GGG - chr8_4:51130406-51130425 None:intergenic 35.0%
!! CAAAGTGATTTTAGGAATGG+GGG - chr8_4:51130615-51130634 None:intergenic 35.0%
!! CCAAAGTGATTTTAGGAATG+GGG - chr8_4:51130616-51130635 None:intergenic 35.0%
!! CCCAAAGTGATTTTAGGAAT+GGG - chr8_4:51130617-51130636 None:intergenic 35.0%
CCCATTCCTAAAATCACTTT+GGG + chr8_4:51130614-51130633 Msa1331570:CDS 35.0%
!! ACCCAAAGTGATTTTAGGAA+TGG - chr8_4:51130618-51130637 None:intergenic 35.0%
! AACAGACCCAAAGTGATTTT+AGG - chr8_4:51130623-51130642 None:intergenic 35.0%
TAAGGAAATCAACATGGGAA+AGG + chr8_4:51130952-51130971 Msa1331570:intron 35.0%
GAAGGTAATTGCTAAGAAAG+AGG - chr8_4:51131161-51131180 None:intergenic 35.0%
TTTGTAGAGTAACAAAGTGG+TGG - chr8_4:51131283-51131302 None:intergenic 35.0%
! AATAAAGTACTCCAACTACC+AGG + chr8_4:51131365-51131384 Msa1331570:intron 35.0%
! TTTATCCCTCCAAGACTTTT+CGG + chr8_4:51131439-51131458 Msa1331570:intron 35.0%
TTTCTTAGTCCGAAAAGTCT+TGG - chr8_4:51131451-51131470 None:intergenic 35.0%
GCATTTGTAGAGAAACAAAG+TGG + chr8_4:51131629-51131648 Msa1331570:intron 35.0%
GCTAGAAGATTATAAAAGCC+TGG + chr8_4:51131907-51131926 Msa1331570:intron 35.0%
AAGATTATAAAAGCCTGGCA+TGG + chr8_4:51131912-51131931 Msa1331570:intron 35.0%
GGCGTTATACTTTGTCATTA+AGG + chr8_4:51131933-51131952 Msa1331570:intron 35.0%
TAAGAAAATCAACATGGGCA+AGG - chr8_4:51132001-51132020 None:intergenic 35.0%
GAATACATAAGTAAAGGAGG+AGG - chr8_4:51132079-51132098 None:intergenic 35.0%
!!! GGAGTGACTTGCTTTTTTAT+AGG - chr8_4:51132112-51132131 None:intergenic 35.0%
!! GTACTGGTATAAGCATTTTG+TGG + chr8_4:51132220-51132239 Msa1331570:intron 35.0%
! AAGCATTTTGTGGTACTACT+TGG + chr8_4:51132230-51132249 Msa1331570:intron 35.0%
TTGTAGGATTATGGCCTATT+TGG - chr8_4:51132447-51132466 None:intergenic 35.0%
TATATCCATGTTGGGATCAT+TGG + chr8_4:51132546-51132565 Msa1331570:intron 35.0%
!! ATTTTGGAGAGTTCTCTCTT+TGG + chr8_4:51132744-51132763 Msa1331570:intron 35.0%
! TTTGTTTCTCCAGCATTGTA+AGG + chr8_4:51132822-51132841 Msa1331570:intron 35.0%
! TTGTTTCTCCAGCATTGTAA+GGG + chr8_4:51132823-51132842 Msa1331570:intron 35.0%
AGTTATTAACTGCAAGTGGA+TGG - chr8_4:51132858-51132877 None:intergenic 35.0%
!! TGATTTGGTAGTGATGAGAA+AGG - chr8_4:51133008-51133027 None:intergenic 35.0%
!!! GCTTTTGAAATGTTGAGTCA+TGG + chr8_4:51133073-51133092 Msa1331570:intron 35.0%
!!! GAGTATTTTAGGTTTGAAGC+AGG - chr8_4:51133191-51133210 None:intergenic 35.0%
!!! AGCTCAAGCAAGAGTATTTT+AGG - chr8_4:51133202-51133221 None:intergenic 35.0%
TTAGATGGACCTCATAAGAA+CGG + chr8_4:51133319-51133338 Msa1331570:intron 35.0%
CCCAACTAGATATACACAAA+TGG - chr8_4:51133630-51133649 None:intergenic 35.0%
GGAGAAAAATCGTATGAACA+AGG + chr8_4:51133724-51133743 Msa1331570:intron 35.0%
AAATCGTATGAACAAGGATG+GGG + chr8_4:51133730-51133749 Msa1331570:CDS 35.0%
! ATTCTGCGATTTTTCTTCAG+GGG + chr8_4:51133859-51133878 Msa1331570:intron 35.0%
CTGTAACAGTTATCATTGCT+TGG + chr8_4:51134028-51134047 Msa1331570:intron 35.0%
AACAGTTATCATTGCTTGGT+AGG + chr8_4:51134032-51134051 Msa1331570:intron 35.0%
GAAAGAATAATGTCTCTGGT+AGG - chr8_4:51134099-51134118 None:intergenic 35.0%
TTGGGAAAGAATAATGTCTC+TGG - chr8_4:51134103-51134122 None:intergenic 35.0%
!! TACTTATTTTTCTCTGGTGG+TGG + chr8_4:51134220-51134239 Msa1331570:intron 35.0%
! AGTTTGTTCACTATCAAGAC+AGG - chr8_4:51134293-51134312 None:intergenic 35.0%
!! GTCTTGATAGTGAACAAACT+AGG + chr8_4:51134293-51134312 Msa1331570:intron 35.0%
!! CTTGATAGTGAACAAACTAG+GGG + chr8_4:51134295-51134314 Msa1331570:intron 35.0%
!! TTGATAGTGAACAAACTAGG+GGG + chr8_4:51134296-51134315 Msa1331570:intron 35.0%
TATTATAACTTCCTCGTCCT+CGG - chr8_4:51134435-51134454 None:intergenic 35.0%
!!! TATTCCTTTTGCTGTTGAGT+TGG + chr8_4:51134543-51134562 Msa1331570:intron 35.0%
GGTTCCAAATAAGTAGACTA+TGG - chr8_4:51134605-51134624 None:intergenic 35.0%
! TACTTATTTGGAACCATCCA+AGG + chr8_4:51134610-51134629 Msa1331570:intron 35.0%
!!! CTGTTGTCTCAGTTTTATTG+TGG + chr8_4:51134663-51134682 Msa1331570:intron 35.0%
! GTTGATACGACTTTTCTTTG+AGG - chr8_4:51134739-51134758 None:intergenic 35.0%
TTTCAACAACCCTCTCTTAT+TGG + chr8_4:51134773-51134792 Msa1331570:intron 35.0%
TTCAACAACCCTCTCTTATT+GGG + chr8_4:51134774-51134793 Msa1331570:intron 35.0%
! TCACATGAAACTTCTGGAAA+TGG - chr8_4:51134824-51134843 None:intergenic 35.0%
TGGAATTCACATGAAACTTC+TGG - chr8_4:51134830-51134849 None:intergenic 35.0%
AAAGGAATTAAGGGGAAGAA+AGG - chr8_4:51134996-51135015 None:intergenic 35.0%
! TTCTTCTTTTGCTCTTCTGA+GGG - chr8_4:51135143-51135162 None:intergenic 35.0%
! TTTCTTCTTTTGCTCTTCTG+AGG - chr8_4:51135144-51135163 None:intergenic 35.0%
ATCAAATGTGCACTTCTGTA+GGG + chr8_4:51135299-51135318 Msa1331570:intron 35.0%
ACATCATGACATCAGATGAT+TGG + chr8_4:51135613-51135632 Msa1331570:three_prime_UTR 35.0%
AACATGAAGGATATCCAAAG+TGG + chr8_4:51135672-51135691 Msa1331570:three_prime_UTR 35.0%
ATGCAGCAATAAAACCACTT+TGG - chr8_4:51135689-51135708 None:intergenic 35.0%
!! GTTTTATTGCTGCATAGTGT+TGG + chr8_4:51135694-51135713 Msa1331570:three_prime_UTR 35.0%
!! AGTGTTGGTCAAATTTGTGA+TGG + chr8_4:51135709-51135728 Msa1331570:three_prime_UTR 35.0%
GAGCTACGATTTAATGCAAT+AGG + chr8_4:51135731-51135750 Msa1331570:three_prime_UTR 35.0%
GAATTCGACATGTGTCTTTA+CGG + chr8_4:51135828-51135847 Msa1331570:three_prime_UTR 35.0%
AATTCGACATGTGTCTTTAC+GGG + chr8_4:51135829-51135848 Msa1331570:three_prime_UTR 35.0%
AAAAATGGACATGTTACCCA+GGG - chr8_4:51135865-51135884 None:intergenic 35.0%
AAGCAATGTACTACTGGAAT+TGG - chr8_4:51135944-51135963 None:intergenic 35.0%
AAGAAAGAAGGTTGGGATTG+TGG + chr8_4:51130280-51130299 Msa1331570:five_prime_UTR 40.0%
ACAACCACTAGAATGGTGAA+AGG + chr8_4:51130350-51130369 Msa1331570:CDS 40.0%
AATGCCAAGAAGAGAAGAAG+GGG - chr8_4:51130405-51130424 None:intergenic 40.0%
GTAATGCCAAGAAGAGAAGA+AGG - chr8_4:51130407-51130426 None:intergenic 40.0%
! GGAACAACAAAGTATCCTCT+CGG + chr8_4:51130525-51130544 Msa1331570:CDS 40.0%
CCCCATTCCTAAAATCACTT+TGG + chr8_4:51130613-51130632 Msa1331570:CDS 40.0%
! ACTGTGAATTTTGCCAGAAG+TGG + chr8_4:51130744-51130763 Msa1331570:CDS 40.0%
ATCAACATGGGAAAGGATCA+AGG + chr8_4:51130959-51130978 Msa1331570:intron 40.0%
TGATATAAGGGAGGCAATGT+TGG - chr8_4:51131047-51131066 None:intergenic 40.0%
GAAGATGCTTGATATAAGGG+AGG - chr8_4:51131056-51131075 None:intergenic 40.0%
! ATCTGCAACTTGTTCTTCAG+CGG + chr8_4:51131117-51131136 Msa1331570:intron 40.0%
GGTAATTGCTAAGAAAGAGG+TGG - chr8_4:51131158-51131177 None:intergenic 40.0%
ATACACGATGTCTCAACAGA+AGG - chr8_4:51131179-51131198 None:intergenic 40.0%
AAATACCAACACCTGGTAGT+TGG - chr8_4:51131379-51131398 None:intergenic 40.0%
TCAGTTGAAATACCAACACC+TGG - chr8_4:51131501-51131520 None:intergenic 40.0%
TTAGTCCGAAAAGTCTTGGA+GGG - chr8_4:51131447-51131466 None:intergenic 40.0%
GTTGAAATACCAACACCTTG+TGG + chr8_4:51131504-51131523 Msa1331570:intron 40.0%
! ATAAAGTACCTGCAACCACA+AGG - chr8_4:51131522-51131541 None:intergenic 40.0%
! AAGAAGATGTTTGGGATGAC+AGG + chr8_4:51131844-51131863 Msa1331570:intron 40.0%
! TAAGAACGGTGGCTTCATTT+TGG - chr8_4:51131975-51131994 None:intergenic 40.0%
CATGGGCAAGGATTTAAGAA+CGG - chr8_4:51131989-51132008 None:intergenic 40.0%
ATACAGGGTCTAAACACATG+TGG - chr8_4:51132479-51132498 None:intergenic 40.0%
TTCCCTATTCAGGCTCTATT+GGG - chr8_4:51132623-51132642 None:intergenic 40.0%
TTTCCCTATTCAGGCTCTAT+TGG - chr8_4:51132624-51132643 None:intergenic 40.0%
TAGAGCCTGAATAGGGAAAT+AGG + chr8_4:51132625-51132644 Msa1331570:intron 40.0%
TCGTTCCTATTTCCCTATTC+AGG - chr8_4:51132633-51132652 None:intergenic 40.0%
ATGAACTCCTAACCAAAGCT+AGG - chr8_4:51132778-51132797 None:intergenic 40.0%
GTTAGGAGTTCATAGAACTC+TGG + chr8_4:51132785-51132804 Msa1331570:intron 40.0%
ACTTAATGCCCTTACAATGC+TGG - chr8_4:51132834-51132853 None:intergenic 40.0%
TGATTGTACAGTGAACACCA+AGG + chr8_4:51132895-51132914 Msa1331570:intron 40.0%
! TCAATGTTGGAAAGGCACAT+TGG + chr8_4:51132930-51132949 Msa1331570:CDS 40.0%
CAGGGAGAAGATTATGCAAA+TGG + chr8_4:51132967-51132986 Msa1331570:CDS 40.0%
ATACATGCACCGTTCTTATG+AGG - chr8_4:51133331-51133350 None:intergenic 40.0%
ATGGCAACCGTACAAAGTTA+AGG - chr8_4:51133550-51133569 None:intergenic 40.0%
GAATTGTATTGTTCCTTGGC+AGG + chr8_4:51133703-51133722 Msa1331570:intron 40.0%
! ATACGATTTTTCTCCTGCCA+AGG - chr8_4:51133719-51133738 None:intergenic 40.0%
! TTGTATGCTGGCTGTAAGAT+TGG + chr8_4:51133832-51133851 Msa1331570:intron 40.0%
TTTCTTCAGGGGTAACATTG+AGG + chr8_4:51133870-51133889 Msa1331570:intron 40.0%
ACTTCAGTGAGACCTAAGAA+TGG + chr8_4:51134002-51134021 Msa1331570:intron 40.0%
CTTCAGTGAGACCTAAGAAT+GGG + chr8_4:51134003-51134022 Msa1331570:intron 40.0%
CTGTTACAGAACCCATTCTT+AGG - chr8_4:51134017-51134036 None:intergenic 40.0%
GTTATAAAGACAGTAGGACG+CGG - chr8_4:51134576-51134595 None:intergenic 40.0%
CCTTCTCTTTAATCCTTGGA+TGG - chr8_4:51134626-51134645 None:intergenic 40.0%
CCATCCAAGGATTAAAGAGA+AGG + chr8_4:51134623-51134642 Msa1331570:intron 40.0%
GGAATTCACCCAATAAGAGA+GGG - chr8_4:51134785-51134804 None:intergenic 40.0%
ATGTGAATTCCACCCCTTTA+TGG + chr8_4:51134838-51134857 Msa1331570:intron 40.0%
ACTTTCTTACCATAAAGGGG+TGG - chr8_4:51134850-51134869 None:intergenic 40.0%
!! AAAGTGTTGAGAGTGAGTGT+CGG + chr8_4:51134865-51134884 Msa1331570:intron 40.0%
CGACATGTCATATCCTAGAA+GGG - chr8_4:51134945-51134964 None:intergenic 40.0%
ACGACATGTCATATCCTAGA+AGG - chr8_4:51134946-51134965 None:intergenic 40.0%
! ATTTGATGGTTACAAGCCCT+TGG - chr8_4:51135286-51135305 None:intergenic 40.0%
! CTACAGAAGTGCACATTTGA+TGG - chr8_4:51135300-51135319 None:intergenic 40.0%
CATCAAATGTGCACTTCTGT+AGG + chr8_4:51135298-51135317 Msa1331570:intron 40.0%
CAAACGTCTCAAAAGCAAGA+AGG + chr8_4:51135338-51135357 Msa1331570:CDS 40.0%
ATGTCGAATTCCCGTAATTG+CGG - chr8_4:51135819-51135838 None:intergenic 40.0%
CAAAAATGGACATGTTACCC+AGG - chr8_4:51135866-51135885 None:intergenic 40.0%
CCTTCTCCCAAGTACAAAAA+TGG - chr8_4:51135880-51135899 None:intergenic 40.0%
!! CCATTTTTGTACTTGGGAGA+AGG + chr8_4:51135877-51135896 Msa1331570:three_prime_UTR 40.0%
! TTTTGTACTTGGGAGAAGGT+TGG + chr8_4:51135881-51135900 Msa1331570:three_prime_UTR 40.0%
TTTGTACTTGGGAGAAGGTT+GGG + chr8_4:51135882-51135901 Msa1331570:three_prime_UTR 40.0%
ACCTTCACTTGATAAGGGTT+TGG + chr8_4:51135986-51136005 Msa1331570:three_prime_UTR 40.0%
!! GGTTTGGCATTTGCTTTTGA+TGG + chr8_4:51136002-51136021 Msa1331570:three_prime_UTR 40.0%
!! GGCATTTGCTTTTGATGGTA+TGG + chr8_4:51136007-51136026 Msa1331570:three_prime_UTR 40.0%
GGCTTCAACAACCACTAGAA+TGG + chr8_4:51130343-51130362 Msa1331570:CDS 45.0%
ATGCCAAGAAGAGAAGAAGG+GGG - chr8_4:51130404-51130423 None:intergenic 45.0%
GAAGAGAGGAGAGGAAGAAA+GGG - chr8_4:51130445-51130464 None:intergenic 45.0%
TGAAGAGAGGAGAGGAAGAA+AGG - chr8_4:51130446-51130465 None:intergenic 45.0%
GCTGTAATTGAAGAGAGGAG+AGG - chr8_4:51130454-51130473 None:intergenic 45.0%
CTTCCTCAGCTTCAGATTCT+GGG + chr8_4:51130504-51130523 Msa1331570:CDS 45.0%
TAGATCGATGTTCGGCTTCT+TGG - chr8_4:51130574-51130593 None:intergenic 45.0%
AGCGGAGATAGATCGATGTT+CGG - chr8_4:51130582-51130601 None:intergenic 45.0%
! GTGAATTTTGCCAGAAGTGG+AGG + chr8_4:51130747-51130766 Msa1331570:CDS 45.0%
TTATTGACATTCTGACCCCC+AGG - chr8_4:51130774-51130793 None:intergenic 45.0%
GGGGGTCAGAATGTCAATAA+AGG + chr8_4:51130774-51130793 Msa1331570:CDS 45.0%
! TCTGCAACTTGTTCTTCAGC+GGG + chr8_4:51131118-51131137 Msa1331570:intron 45.0%
CAAAGAAGTTTGTACCGTCG+AGG + chr8_4:51131220-51131239 Msa1331570:intron 45.0%
! TTGTACCGTCGAGGTATTCT+TGG + chr8_4:51131229-51131248 Msa1331570:intron 45.0%
AGAGTCCAAGAATACCTCGA+CGG - chr8_4:51131237-51131256 None:intergenic 45.0%
CTTAGTCCGAAAAGTCTTGG+AGG - chr8_4:51131448-51131467 None:intergenic 45.0%
! GATGTTTGGGATGACAGGTT+TGG + chr8_4:51131849-51131868 Msa1331570:intron 45.0%
ACAAAGTATAACGCCATGCC+AGG - chr8_4:51131928-51131947 None:intergenic 45.0%
CCATACCAATGATCCCAACA+TGG - chr8_4:51132554-51132573 None:intergenic 45.0%
CCATGTTGGGATCATTGGTA+TGG + chr8_4:51132551-51132570 Msa1331570:intron 45.0%
AAGCCCAATAGAGCCTGAAT+AGG + chr8_4:51132617-51132636 Msa1331570:intron 45.0%
AGCCCAATAGAGCCTGAATA+GGG + chr8_4:51132618-51132637 Msa1331570:intron 45.0%
ATAGGGAAATAGGAACGACG+CGG + chr8_4:51132635-51132654 Msa1331570:intron 45.0%
GAGCGGTATTCTGTTAGGAT+GGG + chr8_4:51132657-51132676 Msa1331570:intron 45.0%
TTGGATAGAGAGCCTAGCTT+TGG + chr8_4:51132763-51132782 Msa1331570:intron 45.0%
!! TAGAGAGCCTAGCTTTGGTT+AGG + chr8_4:51132768-51132787 Msa1331570:intron 45.0%
GTGTTCACTGTACAATCAGC+AGG - chr8_4:51132893-51132912 None:intergenic 45.0%
CATGCGGTTCAATGTTGGAA+AGG + chr8_4:51132922-51132941 Msa1331570:CDS 45.0%
! AGGCACATTGGCTAAGTGAA+AGG + chr8_4:51132942-51132961 Msa1331570:CDS 45.0%
! GGCACATTGGCTAAGTGAAA+GGG + chr8_4:51132943-51132962 Msa1331570:CDS 45.0%
ATTGGCTAAGTGAAAGGGTC+AGG + chr8_4:51132948-51132967 Msa1331570:CDS 45.0%
TTGGCTAAGTGAAAGGGTCA+GGG + chr8_4:51132949-51132968 Msa1331570:CDS 45.0%
! GCTAATAGGGACTTTTCCGT+AGG + chr8_4:51133424-51133443 Msa1331570:intron 45.0%
GGGACGAGCTTCTAACTTAT+AGG - chr8_4:51133484-51133503 None:intergenic 45.0%
AGTTAGAAGCTCGTCCCAAT+TGG + chr8_4:51133487-51133506 Msa1331570:intron 45.0%
GTTAGAAGCTCGTCCCAATT+GGG + chr8_4:51133488-51133507 Msa1331570:intron 45.0%
GGGTAACATTGAGGATGCTT+TGG + chr8_4:51133879-51133898 Msa1331570:CDS 45.0%
!!! ATTTTTCTCTGGTGGTGGTG+AGG + chr8_4:51134225-51134244 Msa1331570:intron 45.0%
TTTATGATTCTCCGAGGACG+AGG + chr8_4:51134421-51134440 Msa1331570:intron 45.0%
!!! TCCTTTTGCTGTTGAGTTGG+TGG + chr8_4:51134546-51134565 Msa1331570:intron 45.0%
TCCACCAACTCAACAGCAAA+AGG - chr8_4:51134550-51134569 None:intergenic 45.0%
AAGAGAAGGAAAATGGGGTG+TGG + chr8_4:51134637-51134656 Msa1331570:intron 45.0%
GGGAATTCACCCAATAAGAG+AGG - chr8_4:51134786-51134805 None:intergenic 45.0%
! CTTTGTGGTTAGTCCCTTCT+AGG + chr8_4:51134929-51134948 Msa1331570:intron 45.0%
!! TTCTTTTGCTCTTCTGAGGG+AGG - chr8_4:51135140-51135159 None:intergenic 45.0%
AATTGCGGCTTAAGCTGACA+AGG - chr8_4:51135804-51135823 None:intergenic 45.0%
GTCAGCTTAAGCCGCAATTA+CGG + chr8_4:51135805-51135824 Msa1331570:three_prime_UTR 45.0%
TCAGCTTAAGCCGCAATTAC+GGG + chr8_4:51135806-51135825 Msa1331570:three_prime_UTR 45.0%
GCCAAACCCTTATCAAGTGA+AGG - chr8_4:51135990-51136009 None:intergenic 45.0%
!! AAGAAGGGGGTGTTGAAGAG+AGG - chr8_4:51130391-51130410 None:intergenic 50.0%
ACACCCCCTTCTTCTCTTCT+TGG + chr8_4:51130398-51130417 Msa1331570:CDS 50.0%
AGAGGAAGAAAGGGCGAGAA+AGG - chr8_4:51130436-51130455 None:intergenic 50.0%
! CGAGCGCTGTAATTGAAGAG+AGG - chr8_4:51130459-51130478 None:intergenic 50.0%
GCTTCCTCAGCTTCAGATTC+TGG + chr8_4:51130503-51130522 Msa1331570:CDS 50.0%
! GTTCCCAGAATCTGAAGCTG+AGG - chr8_4:51130510-51130529 None:intergenic 50.0%
!! AATGGGGGCGTTGTAATCAG+CGG - chr8_4:51130600-51130619 None:intergenic 50.0%
TCAGGTAAAAGCTACGGTCC+AGG - chr8_4:51131016-51131035 None:intergenic 50.0%
GTACTCCAACTACCAGGTGT+TGG + chr8_4:51131371-51131390 Msa1331570:intron 50.0%
TACCAACACCTTGTGGTTGC+AGG + chr8_4:51131511-51131530 Msa1331570:intron 50.0%
TACCTGCAACCACAAGGTGT+TGG - chr8_4:51131516-51131535 None:intergenic 50.0%
AGAGGGCAAGAATATCTCGC+TGG + chr8_4:51131680-51131699 Msa1331570:intron 50.0%
GGGCAAGGATTTAAGAACGG+TGG - chr8_4:51131986-51132005 None:intergenic 50.0%
GTGTAGCAGAGAGGTAACAG+AGG - chr8_4:51132133-51132152 None:intergenic 50.0%
TCACTCACTGTGTAGCAGAG+AGG - chr8_4:51132142-51132161 None:intergenic 50.0%
GGAGCGGTATTCTGTTAGGA+TGG + chr8_4:51132656-51132675 Msa1331570:intron 50.0%
TGAACACCAAGGTCGACATG+CGG + chr8_4:51132906-51132925 Msa1331570:CDS 50.0%
ATTGAACCGCATGTCGACCT+TGG - chr8_4:51132915-51132934 None:intergenic 50.0%
GTCGACATGCGGTTCAATGT+TGG + chr8_4:51132917-51132936 Msa1331570:CDS 50.0%
GTTGAGTCATGGCGTAGTAG+AGG + chr8_4:51133084-51133103 Msa1331570:intron 50.0%
GGATGCTTTGGCAAAGCTTC+AGG + chr8_4:51133891-51133910 Msa1331570:CDS 50.0%
CTAGGGGGAAATTGCAGCTT+AGG + chr8_4:51134311-51134330 Msa1331570:intron 50.0%
!! TTTTGCTCTTCTGAGGGAGG+TGG - chr8_4:51135137-51135156 None:intergenic 50.0%
GAGACGTTTGTGCTCTCCTA+TGG - chr8_4:51135328-51135347 None:intergenic 50.0%
TTACGGGAAGTCAACAACCC+TGG + chr8_4:51135845-51135864 Msa1331570:three_prime_UTR 50.0%
TACGGGAAGTCAACAACCCT+GGG + chr8_4:51135846-51135865 Msa1331570:three_prime_UTR 50.0%
GAAGGTTGGGATTGTGGACG+TGG + chr8_4:51130286-51130305 Msa1331570:five_prime_UTR 55.0%
AGCGCATCGAATTGCAGTGG+CGG - chr8_4:51130486-51130505 None:intergenic 55.0%
! GGAAGCGCATCGAATTGCAG+TGG - chr8_4:51130489-51130508 None:intergenic 55.0%
AGTATCCTCTCGGCTTTCGC+AGG + chr8_4:51130535-51130554 Msa1331570:CDS 55.0%
CGGCTTCTTGGAGAAGCTCA+TGG - chr8_4:51130562-51130581 None:intergenic 55.0%
TTTGCCAGAAGTGGAGGACC+TGG + chr8_4:51130753-51130772 Msa1331570:CDS 55.0%
TTGCCAGAAGTGGAGGACCT+GGG + chr8_4:51130754-51130773 Msa1331570:CDS 55.0%
GGATGACAGGTTTGGCAGCT+TGG + chr8_4:51131857-51131876 Msa1331570:intron 55.0%
GAAATAGGAACGACGCGGAG+CGG + chr8_4:51132640-51132659 Msa1331570:intron 55.0%
ACGCGGAGCGGTATTCTGTT+AGG + chr8_4:51132652-51132671 Msa1331570:intron 55.0%
GAGGCAACTGCAGCCCAATT+GGG - chr8_4:51133504-51133523 None:intergenic 55.0%
TGAGGCAACTGCAGCCCAAT+TGG - chr8_4:51133505-51133524 None:intergenic 55.0%
!! TTCTCTGGTGGTGGTGAGGT+TGG + chr8_4:51134229-51134248 Msa1331570:intron 55.0%
!! TCTCTGGTGGTGGTGAGGTT+GGG + chr8_4:51134230-51134249 Msa1331570:intron 55.0%
CACTTCTGTAGGGCTGCCAT+AGG + chr8_4:51135309-51135328 Msa1331570:intron 55.0%
GCGCATCGAATTGCAGTGGC+GGG - chr8_4:51130485-51130504 None:intergenic 60.0%
ATGGACCTGCGAAAGCCGAG+AGG - chr8_4:51130543-51130562 None:intergenic 60.0%
TGCCAGAAGTGGAGGACCTG+GGG + chr8_4:51130755-51130774 Msa1331570:CDS 60.0%
! GCTCTTCTGAGGGAGGTGGT+GGG - chr8_4:51135133-51135152 None:intergenic 60.0%
! TGCTCTTCTGAGGGAGGTGG+TGG - chr8_4:51135134-51135153 None:intergenic 60.0%
GCCAGAAGTGGAGGACCTGG+GGG + chr8_4:51130756-51130775 Msa1331570:CDS 65.0%
ACCCCCAGGTCCTCCACTTC+TGG - chr8_4:51130760-51130779 None:intergenic 65.0%
!! CTGGTGGTGGTGAGGTTGGG+AGG + chr8_4:51134233-51134252 Msa1331570:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51130250 51136138 51130250 ID=Msa1331570;Name=Msa1331570
chr8_4 mRNA 51130250 51136138 51130250 ID=Msa1331570-mRNA-1;Parent=Msa1331570;Name=Msa1331570-mRNA-1;_AED=0.25;_eAED=0.25;_QI=82|1|1|1|0.85|0.75|8|619|235
chr8_4 exon 51130250 51130635 51130250 ID=Msa1331570-mRNA-1:exon:15063;Parent=Msa1331570-mRNA-1
chr8_4 exon 51130736 51130795 51130736 ID=Msa1331570-mRNA-1:exon:15064;Parent=Msa1331570-mRNA-1
chr8_4 exon 51132906 51132988 51132906 ID=Msa1331570-mRNA-1:exon:15065;Parent=Msa1331570-mRNA-1
chr8_4 exon 51133725 51133789 51133725 ID=Msa1331570-mRNA-1:exon:15066;Parent=Msa1331570-mRNA-1
chr8_4 exon 51133879 51133912 51133879 ID=Msa1331570-mRNA-1:exon:15067;Parent=Msa1331570-mRNA-1
chr8_4 exon 51135104 51135174 51135104 ID=Msa1331570-mRNA-1:exon:15068;Parent=Msa1331570-mRNA-1
chr8_4 exon 51135320 51135450 51135320 ID=Msa1331570-mRNA-1:exon:15069;Parent=Msa1331570-mRNA-1
chr8_4 exon 51135560 51136138 51135560 ID=Msa1331570-mRNA-1:exon:15070;Parent=Msa1331570-mRNA-1
chr8_4 five_prime_UTR 51130250 51130331 51130250 ID=Msa1331570-mRNA-1:five_prime_utr;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51130332 51130635 51130332 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51130736 51130795 51130736 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51132906 51132988 51132906 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51133725 51133789 51133725 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51133879 51133912 51133879 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51135104 51135174 51135104 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 CDS 51135320 51135410 51135320 ID=Msa1331570-mRNA-1:cds;Parent=Msa1331570-mRNA-1
chr8_4 three_prime_UTR 51135411 51135450 51135411 ID=Msa1331570-mRNA-1:three_prime_utr;Parent=Msa1331570-mRNA-1
chr8_4 three_prime_UTR 51135560 51136138 51135560 ID=Msa1331570-mRNA-1:three_prime_utr;Parent=Msa1331570-mRNA-1
Gene Sequence

>Msa1331570

ATGTATGGTATGGCTTCAACAACCACTAGAATGGTGAAAGGAATATTGCTATTACACCTCTCTTCAACACCCCCTTCTTCTCTTCTTGGCATTACTCGCGACCTTTCTCGCCCTTTCTTCCTCTCCTCTCTTCAATTACAGCGCTCGCATCCCGCCACTGCAATTCGATGCGCTTCCTCAGCTTCAGATTCTGGGAACAACAAAGTATCCTCTCGGCTTTCGCAGGTCCATGAGCTTCTCCAAGAAGCCGAACATCGATCTATCTCCGCTGATTACAACGCCCCCATTCCTAAAATCACTTTGGATCATGTTACTGTGAATTTTGCCAGAAGTGGAGGACCTGGGGGTCAGAATGTCAATAAAGTGAACACCAAGGTCGACATGCGGTTCAATGTTGGAAAGGCACATTGGCTAAGTGAAAGGGTCAGGGAGAAGATTATGCAAATGGAGAAAAATCGTATGAACAAGGATGGGGAGCTTGTGATTTCTTCAACCAAAACTAGAACACAGAAGGGTAACATTGAGGATGCTTTGGCAAAGCTTCAGGAAATCATTGATGCAGCATCTTATGTCCCACCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGTTGGCTGCCATAGGAGAGCACAAACGTCTCAAAAGCAAGAAGGTGCAATCAGATAAGAAAGCGCAAAGAAGAAGTAAAAGTAGTTGGGACTAA

Protein sequence

>Msa1331570

MYGMASTTTRMVKGILLLHLSSTPPSSLLGITRDLSRPFFLSSLQLQRSHPATAIRCASSASDSGNNKVSSRLSQVHELLQEAEHRSISADYNAPIPKITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVGKAHWLSERVREKIMQMEKNRMNKDGELVISSTKTRTQKGNIEDALAKLQEIIDAASYVPPPPSEEQKKKIAKLAAIGEHKRLKSKKVQSDKKAQRRSKSSWD*