Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836250 | XP_003611772.1 | 86.146 | 397 | 28 | 2 | 1 | 371 | 1 | 396 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836250 | sp|O23179|PLP1_ARATH | 51.047 | 382 | 160 | 3 | 8 | 364 | 17 | 396 | 1.88e-133 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836250 | G7K805 | 86.146 | 397 | 28 | 2 | 1 | 371 | 1 | 396 | 0.0 | 674 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063540 | Msa0836250 | 0.805602 | 1.233276e-49 | -8.615850e-47 |
| Msa0685080 | Msa0836250 | 0.801596 | 8.357576e-49 | -8.615850e-47 |
| Msa0715220 | Msa0836250 | 0.935435 | 8.515023e-97 | -8.615850e-47 |
| Msa0741360 | Msa0836250 | 0.808006 | 3.828643e-50 | -8.615850e-47 |
| Msa0757120 | Msa0836250 | 0.822917 | 1.832306e-53 | -8.615850e-47 |
| Msa0798150 | Msa0836250 | 0.825989 | 3.469632e-54 | -8.615850e-47 |
| Msa0836250 | Msa0946010 | 0.805182 | 1.510420e-49 | -8.615850e-47 |
| Msa0836250 | Msa0987640 | 0.821280 | 4.389964e-53 | -8.615850e-47 |
| Msa0836250 | Msa1006170 | 0.803684 | 3.099438e-49 | -8.615850e-47 |
| Msa0836250 | Msa1061670 | 0.816183 | 6.305631e-52 | -8.615850e-47 |
| Msa0836250 | Msa1106680 | 0.815909 | 7.260114e-52 | -8.615850e-47 |
| Msa0836250 | Msa1106960 | 0.813533 | 2.439254e-51 | -8.615850e-47 |
| Msa0836250 | Msa1147030 | 0.819975 | 8.755607e-53 | -8.615850e-47 |
| Msa0836250 | Msa1181090 | 0.804132 | 2.501583e-49 | -8.615850e-47 |
| Msa0836250 | Msa1197910 | 0.810816 | 9.551482e-51 | -8.615850e-47 |
| Msa0836250 | Msa1445900 | 0.803211 | 3.885343e-49 | -8.615850e-47 |
| Msa0836250 | Msa1459610 | 0.812257 | 4.643671e-51 | -8.615850e-47 |
| Msa0209060 | Msa0836250 | 0.822297 | 2.554942e-53 | -8.615850e-47 |
| Msa0288540 | Msa0836250 | 0.829766 | 4.283018e-55 | -8.615850e-47 |
| Msa0326770 | Msa0836250 | 0.805804 | 1.118653e-49 | -8.615850e-47 |
| Msa0593870 | Msa0836250 | 0.800677 | 1.288196e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836250 | MtrunA17_Chr5g0402451 | 86.146 | 397 | 28 | 2 | 1 | 371 | 1 | 396 | 0.0 | 674 |
| Msa0836250 | MtrunA17_Chr5g0402441 | 80.711 | 394 | 46 | 4 | 4 | 371 | 10 | 399 | 0.0 | 617 |
| Msa0836250 | MtrunA17_Chr1g0153781 | 50.254 | 394 | 164 | 5 | 1 | 364 | 9 | 400 | 5.52e-133 | 386 |
| Msa0836250 | MtrunA17_Chr3g0133691 | 51.047 | 382 | 160 | 3 | 8 | 364 | 18 | 397 | 9.21e-123 | 360 |
| Msa0836250 | MtrunA17_Chr3g0133681 | 50.785 | 382 | 161 | 3 | 8 | 364 | 18 | 397 | 9.05e-122 | 357 |
| Msa0836250 | MtrunA17_Chr8g0335651 | 40.160 | 376 | 182 | 8 | 8 | 363 | 31 | 383 | 3.38e-67 | 218 |
| Msa0836250 | MtrunA17_Chr8g0335581 | 36.269 | 386 | 207 | 11 | 8 | 366 | 19 | 392 | 1.74e-63 | 208 |
| Msa0836250 | MtrunA17_Chr8g0335611 | 35.544 | 377 | 209 | 9 | 10 | 363 | 32 | 397 | 4.94e-63 | 207 |
| Msa0836250 | MtrunA17_Chr8g0335621 | 35.309 | 388 | 214 | 10 | 10 | 371 | 63 | 439 | 1.10e-62 | 207 |
| Msa0836250 | MtrunA17_Chr8g0335591 | 34.805 | 385 | 216 | 8 | 10 | 370 | 32 | 405 | 1.73e-59 | 198 |
| Msa0836250 | MtrunA17_Chr8g0335631 | 38.046 | 389 | 202 | 10 | 8 | 371 | 30 | 404 | 1.18e-57 | 193 |
| Msa0836250 | MtrunA17_Chr1g0199801 | 28.329 | 353 | 199 | 12 | 10 | 325 | 75 | 410 | 7.43e-27 | 110 |
| Msa0836250 | MtrunA17_Chr1g0185551 | 25.080 | 311 | 174 | 13 | 12 | 292 | 32 | 313 | 8.23e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0836250 | AT4G37070.2 | 51.047 | 382 | 160 | 3 | 8 | 364 | 17 | 396 | 1.91e-134 | 390 |
| Msa0836250 | AT4G37060.1 | 52.493 | 381 | 154 | 3 | 9 | 364 | 18 | 396 | 3.76e-134 | 389 |
| Msa0836250 | AT2G26560.1 | 52.987 | 385 | 145 | 6 | 8 | 363 | 17 | 394 | 4.22e-131 | 382 |
| Msa0836250 | AT4G37070.3 | 51.491 | 369 | 152 | 3 | 8 | 351 | 17 | 383 | 2.40e-130 | 379 |
| Msa0836250 | AT4G37070.1 | 51.491 | 369 | 152 | 3 | 8 | 351 | 17 | 383 | 2.40e-130 | 379 |
| Msa0836250 | AT4G37050.1 | 54.242 | 389 | 145 | 4 | 9 | 365 | 34 | 421 | 8.96e-130 | 379 |
| Msa0836250 | AT4G37060.2 | 48.544 | 412 | 154 | 4 | 9 | 364 | 18 | 427 | 2.48e-127 | 373 |
| Msa0836250 | AT4G37070.4 | 49.051 | 369 | 150 | 4 | 8 | 351 | 17 | 372 | 4.13e-120 | 352 |
| Msa0836250 | AT5G43590.1 | 49.869 | 383 | 158 | 9 | 8 | 363 | 12 | 387 | 2.92e-101 | 305 |
| Msa0836250 | AT5G43590.2 | 49.869 | 383 | 158 | 9 | 8 | 363 | 79 | 454 | 3.06e-100 | 305 |
| Msa0836250 | AT3G54950.1 | 30.702 | 342 | 192 | 12 | 10 | 325 | 98 | 420 | 6.93e-32 | 125 |
| Msa0836250 | AT2G39220.1 | 30.612 | 343 | 194 | 12 | 10 | 325 | 108 | 433 | 6.98e-31 | 123 |
| Msa0836250 | AT4G29800.1 | 26.816 | 358 | 205 | 11 | 6 | 324 | 117 | 456 | 2.72e-23 | 101 |
| Msa0836250 | AT4G29800.2 | 27.298 | 359 | 203 | 12 | 6 | 324 | 117 | 457 | 3.49e-23 | 101 |
| Msa0836250 | AT3G63200.1 | 23.344 | 317 | 182 | 12 | 12 | 296 | 32 | 319 | 2.35e-17 | 83.2 |
Find 79 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAATGGTGCCTTTATC+TGG | 0.177833 | 5_4:+9742332 | None:intergenic |
| ATGCTAAGATGGTTGCTAAA+TGG | 0.247274 | 5_4:-9743255 | Msa0836250:CDS |
| ATTTCTTTGGCAGCAAATAA+TGG | 0.285222 | 5_4:+9744462 | None:intergenic |
| TAACAACGTTTGTCAAAGTT+TGG | 0.299732 | 5_4:+9744126 | None:intergenic |
| ATCACTGTTCTTAGCATTGA+TGG | 0.321271 | 5_4:-9744758 | Msa0836250:CDS |
| GAGATTGAAGGGCAGTAAAA+AGG | 0.329901 | 5_4:+9743137 | None:intergenic |
| GTAGAATGGCACAATTTCTT+TGG | 0.336854 | 5_4:+9744449 | None:intergenic |
| CGGTTATTAGCCTTTGGATT+TGG | 0.338215 | 5_4:+9744486 | None:intergenic |
| TTGACAGGATCCAAGTATAA+TGG | 0.349207 | 5_4:-9744200 | Msa0836250:CDS |
| TGTTTGCATTGCAGGTTTGC+TGG | 0.358778 | 5_4:-9741207 | Msa0836250:intron |
| CTACCTTGAATCTCAACTTC+AGG | 0.365376 | 5_4:-9744696 | Msa0836250:intron |
| TGACAGGATCCAAGTATAAT+GGG | 0.365515 | 5_4:-9744199 | Msa0836250:CDS |
| TGCTAAGATGGTTGCTAAAT+GGG | 0.379655 | 5_4:-9743254 | Msa0836250:CDS |
| ATTGTTATATCCATTGGAAC+TGG | 0.387387 | 5_4:-9743304 | Msa0836250:CDS |
| AATGGACGGTTATTAGCCTT+TGG | 0.389946 | 5_4:+9744480 | None:intergenic |
| GAAACAGGAAGATACATTAC+AGG | 0.392737 | 5_4:-9742480 | Msa0836250:intron |
| CAATGAAGCAAGCAATGATA+TGG | 0.405444 | 5_4:-9743179 | Msa0836250:CDS |
| TTTGAAACAGATCCAGATAA+AGG | 0.405893 | 5_4:-9742344 | Msa0836250:CDS |
| TTATCCCCACTTCTCCCATC+TGG | 0.424861 | 5_4:+9743349 | None:intergenic |
| AAGCCTTTGTTGTGTTTATG+AGG | 0.435853 | 5_4:+9744222 | None:intergenic |
| TTTGAATAATCTAGTAAAAG+TGG | 0.438859 | 5_4:-9742420 | Msa0836250:CDS |
| GGCGTCAGAGGAATCATTCC+TGG | 0.439433 | 5_4:-9744731 | Msa0836250:CDS |
| AAACCTGAAGTTGAGATTCA+AGG | 0.467692 | 5_4:+9744693 | None:intergenic |
| GAGATACTCCCCATTATACT+TGG | 0.481242 | 5_4:+9744190 | None:intergenic |
| CAGGTTTGCTGGTTTACTCT+CGG | 0.481566 | 5_4:-9741196 | Msa0836250:CDS |
| TACACGAGTGAATTTAGATA+CGG | 0.484931 | 5_4:-9742372 | Msa0836250:CDS |
| TTTATTTGATCCAGTTCCAA+TGG | 0.487089 | 5_4:+9743294 | None:intergenic |
| AGGAAACCAGATGGGAGAAG+TGG | 0.489397 | 5_4:-9743355 | Msa0836250:CDS |
| GGTAGTTGTCTTGAGATTGA+AGG | 0.493175 | 5_4:+9743125 | None:intergenic |
| TCATATTTCTGATCAGCTTG+TGG | 0.494064 | 5_4:+9744168 | None:intergenic |
| TCATTGAAACAATCTAGTAT+TGG | 0.496446 | 5_4:+9743196 | None:intergenic |
| CTAAATGGGGTGCATTGACT+TGG | 0.502394 | 5_4:-9743240 | Msa0836250:CDS |
| GTAATTGCCGGGACAAGTAC+AGG | 0.508616 | 5_4:-9744537 | Msa0836250:CDS |
| AACACAACAAAGGCTTTGAC+AGG | 0.510884 | 5_4:-9744215 | Msa0836250:CDS |
| TGGATTTGGTGCTGCTAACA+TGG | 0.511228 | 5_4:+9744500 | None:intergenic |
| AGTTTCTGAACATCAAAAGA+TGG | 0.514848 | 5_4:+9744101 | None:intergenic |
| AAGTGACAAAGCATATCATA+AGG | 0.518189 | 5_4:-9743375 | Msa0836250:CDS |
| TTGAATAATCTAGTAAAAGT+GGG | 0.529289 | 5_4:-9742419 | Msa0836250:CDS |
| AGCCTTTGTTGTGTTTATGA+GGG | 0.529416 | 5_4:+9744223 | None:intergenic |
| TGGTGTGGCTGCTAACAATC+CGG | 0.532379 | 5_4:-9743755 | Msa0836250:intron |
| CCATTGAGGAAGAACTCAAA+AGG | 0.542620 | 5_4:-9742319 | Msa0836250:intron |
| TTGACTTGGTTATTCAACAA+TGG | 0.544592 | 5_4:-9743226 | Msa0836250:CDS |
| GGAAACCAGATGGGAGAAGT+GGG | 0.551573 | 5_4:-9743354 | Msa0836250:CDS |
| AAGAATACAAACCTCATTGA+CGG | 0.552137 | 5_4:-9743778 | Msa0836250:CDS |
| AGATAGACGGTGAGGATGCA+AGG | 0.552648 | 5_4:-9744578 | Msa0836250:CDS |
| GTAGTTGTCTTGAGATTGAA+GGG | 0.559050 | 5_4:+9743126 | None:intergenic |
| GTTCTTAGCATTGATGGTGG+AGG | 0.559782 | 5_4:-9744752 | Msa0836250:CDS |
| GAGACCACCTGTACTTGTCC+CGG | 0.561120 | 5_4:+9744530 | None:intergenic |
| GCCTTTGTTGTGTTTATGAG+GGG | 0.565853 | 5_4:+9744224 | None:intergenic |
| CTTTGGCAGCAAATAATGGA+CGG | 0.569663 | 5_4:+9744466 | None:intergenic |
| ACACGAGTGAATTTAGATAC+GGG | 0.570644 | 5_4:-9742371 | Msa0836250:CDS |
| GCGCAAGTACAATGCTAAGA+TGG | 0.573767 | 5_4:-9743266 | Msa0836250:CDS |
| ATTGATGGTGGAGGCGTCAG+AGG | 0.577961 | 5_4:-9744743 | Msa0836250:CDS |
| AGAACAGTGATGAAATTCAC+AGG | 0.591725 | 5_4:+9744770 | None:intergenic |
| AATTAAAACTACCTGATAGG+AGG | 0.595673 | 5_4:+9744061 | None:intergenic |
| AAACAGGAAGATACATTACA+GGG | 0.601655 | 5_4:-9742479 | Msa0836250:intron |
| CTTAACTTACTTGAATTCTG+AGG | 0.602574 | 5_4:+9743104 | None:intergenic |
| ATTACTTTACAGGAGATAGA+CGG | 0.615563 | 5_4:-9744591 | Msa0836250:intron |
| TCCAGATAAAGGCACCATTG+AGG | 0.615902 | 5_4:-9742333 | Msa0836250:CDS |
| CAGCCACACCACCGTCAATG+AGG | 0.625656 | 5_4:+9743767 | None:intergenic |
| ACTGTTCTTAGCATTGATGG+TGG | 0.626560 | 5_4:-9744755 | Msa0836250:CDS |
| ATATCATAAGGAAACCAGAT+GGG | 0.629961 | 5_4:-9743363 | Msa0836250:CDS |
| CATATCATAAGGAAACCAGA+TGG | 0.632027 | 5_4:-9743364 | Msa0836250:CDS |
| AGCTGATCAGAAATATGACA+AGG | 0.632561 | 5_4:-9744163 | Msa0836250:CDS |
| AAACAGGCAGACCTTTGCTG+TGG | 0.640107 | 5_4:+9744402 | None:intergenic |
| CTGAAGTTGAGATTCAAGGT+AGG | 0.644708 | 5_4:+9744697 | None:intergenic |
| GTTAGCAGCACCAAATCCAA+AGG | 0.650775 | 5_4:-9744496 | Msa0836250:CDS |
| AAACCTCATTGACGGTGGTG+TGG | 0.660124 | 5_4:-9743770 | Msa0836250:CDS |
| GACAGGATCCAAGTATAATG+GGG | 0.665880 | 5_4:-9744198 | Msa0836250:CDS |
| AGGTAGGCAAGAATAACACC+AGG | 0.666909 | 5_4:+9744713 | None:intergenic |
| GCTAAGATGGTTGCTAAATG+GGG | 0.667354 | 5_4:-9743253 | Msa0836250:CDS |
| ACCCCTCATAAACACAACAA+AGG | 0.672606 | 5_4:-9744225 | Msa0836250:CDS |
| GCTGATCAGAAATATGACAA+GGG | 0.691046 | 5_4:-9744162 | Msa0836250:CDS |
| ACAGGAAGATACATTACAGG+GGG | 0.697116 | 5_4:-9742477 | Msa0836250:intron |
| TTTACAGGAGATAGACGGTG+AGG | 0.702178 | 5_4:-9744586 | Msa0836250:intron |
| GAAACCAGATGGGAGAAGTG+GGG | 0.707369 | 5_4:-9743353 | Msa0836250:CDS |
| ATTGCCGGGACAAGTACAGG+TGG | 0.725577 | 5_4:-9744534 | Msa0836250:CDS |
| AATACAAACCTCATTGACGG+TGG | 0.737517 | 5_4:-9743775 | Msa0836250:CDS |
| AACAGGAAGATACATTACAG+GGG | 0.742212 | 5_4:-9742478 | Msa0836250:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTACTAAATTTGTA+AGG | - | chr5_4:9742322-9742341 | Msa0836250:CDS | 10.0% |
| !! | TCATATCTTTAAATTAATAA+TGG | - | chr5_4:9743366-9743385 | Msa0836250:CDS | 10.0% |
| !! | TTCTAATTAACTTAAAAATA+GGG | + | chr5_4:9743776-9743795 | None:intergenic | 10.0% |
| !! | ATTCTAATTAACTTAAAAAT+AGG | + | chr5_4:9743777-9743796 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTCTAATTTTTC+TGG | - | chr5_4:9743874-9743893 | Msa0836250:intron | 10.0% |
| !!! | AAAAAAATTCTAATTTTTCT+GGG | - | chr5_4:9743875-9743894 | Msa0836250:intron | 10.0% |
| !!! | ATATTTAACCATTTATTTTA+GGG | - | chr5_4:9744084-9744103 | Msa0836250:CDS | 10.0% |
| !!! | TAACATATATAATTAGTTTT+AGG | + | chr5_4:9744709-9744728 | None:intergenic | 10.0% |
| !! | ATTAATTAAGATATTAGTGA+AGG | + | chr5_4:9741289-9741308 | None:intergenic | 15.0% |
| !!! | TATTAGTATTGTTAGTTTTT+AGG | + | chr5_4:9741670-9741689 | None:intergenic | 15.0% |
| !!! | TTAAAACAAGTTTTGATATA+TGG | - | chr5_4:9742384-9742403 | Msa0836250:CDS | 15.0% |
| !! | AAGCAAATATATAAAAATAG+TGG | - | chr5_4:9743202-9743221 | Msa0836250:CDS | 15.0% |
| !! | AGCAAATATATAAAAATAGT+GGG | - | chr5_4:9743203-9743222 | Msa0836250:CDS | 15.0% |
| !! | TTTAAATTGTTACAAACTTA+CGG | - | chr5_4:9743424-9743443 | Msa0836250:intron | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+AGG | + | chr5_4:9743745-9743764 | None:intergenic | 15.0% |
| !! | GAAAAGTTATCATATTTATA+AGG | - | chr5_4:9744052-9744071 | Msa0836250:intron | 15.0% |
| !!! | TAAATGGTTAAATATGTTTT+TGG | + | chr5_4:9744079-9744098 | None:intergenic | 15.0% |
| !!! | CATATTTAACCATTTATTTT+AGG | - | chr5_4:9744083-9744102 | Msa0836250:CDS | 15.0% |
| !! | ATAATTAACCCTAAAATAAA+TGG | + | chr5_4:9744095-9744114 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr5_4:9744568-9744587 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr5_4:9744567-9744586 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr5_4:9744347-9744366 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr5_4:9744478-9744497 | Msa0836250:CDS | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr5_4:9744567-9744586 | Msa0836250:CDS | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr5_4:9744568-9744587 | Msa0836250:CDS | 15.0% |
| !! | ATAGATACCAAAAATTAAAC+AGG | + | chr5_4:9741554-9741573 | None:intergenic | 20.0% |
| !! | AGTATAAATACATGAAAATC+TGG | - | chr5_4:9741609-9741628 | Msa0836250:intron | 20.0% |
| !! | AATACTAATATTATATGCAG+TGG | - | chr5_4:9741680-9741699 | Msa0836250:intron | 20.0% |
| !! | AAAAATTAAAACTACCTGAT+AGG | + | chr5_4:9741882-9741901 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTCTTTTTAATGT+GGG | + | chr5_4:9742254-9742273 | None:intergenic | 20.0% |
| !!! | ATCTTTTCTTCTTTTTAATG+TGG | + | chr5_4:9742255-9742274 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATAGGCTTAAGA+CGG | - | chr5_4:9742472-9742491 | Msa0836250:CDS | 20.0% |
| !! | AATGTACTATAGATAAGATT+TGG | + | chr5_4:9743327-9743346 | None:intergenic | 20.0% |
| !! | TTTGAATAATCTAGTAAAAG+TGG | - | chr5_4:9743517-9743536 | Msa0836250:intron | 20.0% |
| !! | TTGAATAATCTAGTAAAAGT+GGG | - | chr5_4:9743518-9743537 | Msa0836250:intron | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | - | chr5_4:9743659-9743678 | Msa0836250:intron | 20.0% |
| !!! | AAAATTTTAAAAGGGCTAAA+AGG | + | chr5_4:9743707-9743726 | None:intergenic | 20.0% |
| !!! | GTTGAAGGAAAATTTTAAAA+GGG | + | chr5_4:9743715-9743734 | None:intergenic | 20.0% |
| !!! | AGTTGAAGGAAAATTTTAAA+AGG | + | chr5_4:9743716-9743735 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr5_4:9743749-9743768 | Msa0836250:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAGT+AGG | - | chr5_4:9743960-9743979 | Msa0836250:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAGTA+GGG | - | chr5_4:9743961-9743980 | Msa0836250:intron | 20.0% |
| !!! | AAAAATTTCATCTTCACTTT+TGG | + | chr5_4:9743988-9744007 | None:intergenic | 20.0% |
| !!! | GTGAAGATGAAATTTTTTTA+AGG | - | chr5_4:9743991-9744010 | Msa0836250:intron | 20.0% |
| !!! | AAGTTGATGAAATTTTTTAG+AGG | - | chr5_4:9744020-9744039 | Msa0836250:intron | 20.0% |
| !!! | AGTTGATGAAATTTTTTAGA+GGG | - | chr5_4:9744021-9744040 | Msa0836250:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr5_4:9744217-9744236 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr5_4:9744218-9744237 | None:intergenic | 20.0% |
| !! | GTATATGTTGATTACTTTAC+AGG | - | chr5_4:9741336-9741355 | Msa0836250:intron | 25.0% |
| !!! | GATTATTTTGATGTAATTGC+CGG | - | chr5_4:9741388-9741407 | Msa0836250:intron | 25.0% |
| !!! | ATTATTTTGATGTAATTGCC+GGG | - | chr5_4:9741389-9741408 | Msa0836250:intron | 25.0% |
| !!! | AAATATTTGGCAAGTTTTGA+AGG | + | chr5_4:9741513-9741532 | None:intergenic | 25.0% |
| ! | TAAATACATGAAAATCTGGT+TGG | - | chr5_4:9741613-9741632 | Msa0836250:intron | 25.0% |
| ! | AAATACATGAAAATCTGGTT+GGG | - | chr5_4:9741614-9741633 | Msa0836250:intron | 25.0% |
| !!! | AGTATTGTTAGTTTTTAGGA+TGG | + | chr5_4:9741666-9741685 | None:intergenic | 25.0% |
| ! | TTCGAAAAAAAAGATGAACA+TGG | - | chr5_4:9742125-9742144 | Msa0836250:intron | 25.0% |
| ! | TCGAAAAAAAAGATGAACAT+GGG | - | chr5_4:9742126-9742145 | Msa0836250:intron | 25.0% |
| !!! | GAGTTTTTTTTCGATATTCT+TGG | + | chr5_4:9742227-9742246 | None:intergenic | 25.0% |
| ! | TTACTAAATTTGTAAGGACA+AGG | - | chr5_4:9742328-9742347 | Msa0836250:CDS | 25.0% |
| ! | TACTAAATTTGTAAGGACAA+GGG | - | chr5_4:9742329-9742348 | Msa0836250:CDS | 25.0% |
| !!! | GACTTACTTTTGAAGATTAT+TGG | + | chr5_4:9742360-9742379 | None:intergenic | 25.0% |
| ! | ATAATCTTCAAAAGTAAGTC+AGG | - | chr5_4:9742360-9742379 | Msa0836250:CDS | 25.0% |
| !! | ATAATGTATATGAGACGTTT+TGG | - | chr5_4:9742424-9742443 | Msa0836250:CDS | 25.0% |
| !!! | TTTTTTTATAGGCTTAAGAC+GGG | - | chr5_4:9742473-9742492 | Msa0836250:CDS | 25.0% |
| ! | AAATCATATGTCAACAATCA+AGG | + | chr5_4:9742516-9742535 | None:intergenic | 25.0% |
| ! | ATATGATTTATTGCAGAGTA+TGG | - | chr5_4:9742527-9742546 | Msa0836250:intron | 25.0% |
| !!! | CGTTTTATTGTTATATCCAT+TGG | - | chr5_4:9742627-9742646 | Msa0836250:intron | 25.0% |
| ! | TCATTGAAACAATCTAGTAT+TGG | + | chr5_4:9742744-9742763 | None:intergenic | 25.0% |
| !! | CTTAGTTGATATTTGAATTC+CGG | + | chr5_4:9742962-9742981 | None:intergenic | 25.0% |
| !! | TCAATTTTGTCTATGAGTAT+TGG | - | chr5_4:9743060-9743079 | Msa0836250:intron | 25.0% |
| ! | TTATTTGCAGAAGAAATCTT+GGG | + | chr5_4:9743111-9743130 | None:intergenic | 25.0% |
| ! | TTTATTTGCAGAAGAAATCT+TGG | + | chr5_4:9743112-9743131 | None:intergenic | 25.0% |
| ! | AAAAACTCATTTGTCAACTT+AGG | + | chr5_4:9743267-9743286 | None:intergenic | 25.0% |
| ! | CAAACAAAATAAAATCTAGC+TGG | + | chr5_4:9743303-9743322 | None:intergenic | 25.0% |
| ! | TTATAAGGACTAAAAGTTGA+AGG | + | chr5_4:9743730-9743749 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr5_4:9744187-9744206 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr5_4:9744506-9744525 | Msa0836250:CDS | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr5_4:9744507-9744526 | Msa0836250:CDS | 25.0% |
| ATTACTTTACAGGAGATAGA+CGG | - | chr5_4:9741346-9741365 | Msa0836250:intron | 30.0% | |
| ATTTCTTTGGCAGCAAATAA+TGG | + | chr5_4:9741478-9741497 | None:intergenic | 30.0% | |
| ! | CTTTGCTGTGGAAAAATATT+TGG | + | chr5_4:9741526-9741545 | None:intergenic | 30.0% |
| ! | CAAATATTTTTCCACAGCAA+AGG | - | chr5_4:9741524-9741543 | Msa0836250:intron | 30.0% |
| TTATACGCACACATATGATA+TGG | + | chr5_4:9741584-9741603 | None:intergenic | 30.0% | |
| AATACATGAAAATCTGGTTG+GGG | - | chr5_4:9741615-9741634 | Msa0836250:intron | 30.0% | |
| TAACAACGTTTGTCAAAGTT+TGG | + | chr5_4:9741814-9741833 | None:intergenic | 30.0% | |
| AGTTTCTGAACATCAAAAGA+TGG | + | chr5_4:9741839-9741858 | None:intergenic | 30.0% | |
| AATTAAAACTACCTGATAGG+AGG | + | chr5_4:9741879-9741898 | None:intergenic | 30.0% | |
| AGATATTTGCATAGCTACAT+CGG | - | chr5_4:9742073-9742092 | Msa0836250:intron | 30.0% | |
| !!! | TTTTTTTCGAAATAGTGAGC+TGG | + | chr5_4:9742116-9742135 | None:intergenic | 30.0% |
| AAGAATACAAACCTCATTGA+CGG | - | chr5_4:9742159-9742178 | Msa0836250:intron | 30.0% | |
| !!! | TTTTTTATAGGCTTAAGACG+GGG | - | chr5_4:9742474-9742493 | Msa0836250:CDS | 30.0% |
| AAGTGACAAAGCATATCATA+AGG | - | chr5_4:9742562-9742581 | Msa0836250:intron | 30.0% | |
| ATATCATAAGGAAACCAGAT+GGG | - | chr5_4:9742574-9742593 | Msa0836250:intron | 30.0% | |
| ATTGTTATATCCATTGGAAC+TGG | - | chr5_4:9742633-9742652 | Msa0836250:intron | 30.0% | |
| TTTATTTGATCCAGTTCCAA+TGG | + | chr5_4:9742646-9742665 | None:intergenic | 30.0% | |
| !! | TTGACTTGGTTATTCAACAA+TGG | - | chr5_4:9742711-9742730 | Msa0836250:intron | 30.0% |
| CTTAACTTACTTGAATTCTG+AGG | + | chr5_4:9742836-9742855 | None:intergenic | 30.0% | |
| AAGTAAGTTAAGCACATGTT+TGG | - | chr5_4:9742844-9742863 | Msa0836250:intron | 30.0% | |
| !!! | ATTTTGTCTATGAGTATTGG+TGG | - | chr5_4:9743063-9743082 | Msa0836250:intron | 30.0% |
| AAATTGTTACAAACTTACGG+TGG | - | chr5_4:9743427-9743446 | Msa0836250:intron | 30.0% | |
| AAACAGGAAGATACATTACA+GGG | - | chr5_4:9743458-9743477 | Msa0836250:intron | 30.0% | |
| TACACGAGTGAATTTAGATA+CGG | - | chr5_4:9743565-9743584 | Msa0836250:intron | 30.0% | |
| ! | TTTGAAACAGATCCAGATAA+AGG | - | chr5_4:9743593-9743612 | Msa0836250:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr5_4:9744599-9744618 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr5_4:9744598-9744617 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr5_4:9744188-9744207 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr5_4:9744444-9744463 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr5_4:9744598-9744617 | Msa0836250:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr5_4:9744599-9744618 | Msa0836250:intron | 30.0% |
| !!! | AGCTTTTTTTCCCTTAGTTT+GGG | + | chr5_4:9744680-9744699 | None:intergenic | 30.0% |
| !!! | TAGCTTTTTTTCCCTTAGTT+TGG | + | chr5_4:9744681-9744700 | None:intergenic | 30.0% |
| TATGTTAATGTTTGCATTGC+AGG | - | chr5_4:9744722-9744741 | Msa0836250:CDS | 30.0% | |
| AGAACAGTGATGAAATTCAC+AGG | + | chr5_4:9741170-9741189 | None:intergenic | 35.0% | |
| ! | ATCACTGTTCTTAGCATTGA+TGG | - | chr5_4:9741179-9741198 | Msa0836250:CDS | 35.0% |
| AAACCTGAAGTTGAGATTCA+AGG | + | chr5_4:9741247-9741266 | None:intergenic | 35.0% | |
| GTAGAATGGCACAATTTCTT+TGG | + | chr5_4:9741491-9741510 | None:intergenic | 35.0% | |
| !! | AGGTCTGCCTGTTTAATTTT+TGG | - | chr5_4:9741544-9741563 | Msa0836250:intron | 35.0% |
| ! | AGCCTTTGTTGTGTTTATGA+GGG | + | chr5_4:9741717-9741736 | None:intergenic | 35.0% |
| ! | AAGCCTTTGTTGTGTTTATG+AGG | + | chr5_4:9741718-9741737 | None:intergenic | 35.0% |
| TTGACAGGATCCAAGTATAA+TGG | - | chr5_4:9741737-9741756 | Msa0836250:intron | 35.0% | |
| TGACAGGATCCAAGTATAAT+GGG | - | chr5_4:9741738-9741757 | Msa0836250:intron | 35.0% | |
| ! | TCATATTTCTGATCAGCTTG+TGG | + | chr5_4:9741772-9741791 | None:intergenic | 35.0% |
| AGCTGATCAGAAATATGACA+AGG | - | chr5_4:9741774-9741793 | Msa0836250:intron | 35.0% | |
| GCTGATCAGAAATATGACAA+GGG | - | chr5_4:9741775-9741794 | Msa0836250:intron | 35.0% | |
| TGATAGGAGGAAAAAATGGT+AGG | + | chr5_4:9741866-9741885 | None:intergenic | 35.0% | |
| !!! | TACCATTTTTTCCTCCTATC+AGG | - | chr5_4:9741865-9741884 | Msa0836250:intron | 35.0% |
| TACCTGATAGGAGGAAAAAA+TGG | + | chr5_4:9741870-9741889 | None:intergenic | 35.0% | |
| TAGTGAGCTGGTAAATAAGT+TGG | + | chr5_4:9742104-9742123 | None:intergenic | 35.0% | |
| CTAACAATCCGGTAAAATTC+TGG | - | chr5_4:9742193-9742212 | Msa0836250:intron | 35.0% | |
| CATATCATAAGGAAACCAGA+TGG | - | chr5_4:9742573-9742592 | Msa0836250:intron | 35.0% | |
| ATGCTAAGATGGTTGCTAAA+TGG | - | chr5_4:9742682-9742701 | Msa0836250:intron | 35.0% | |
| TGCTAAGATGGTTGCTAAAT+GGG | - | chr5_4:9742683-9742702 | Msa0836250:intron | 35.0% | |
| CAATGAAGCAAGCAATGATA+TGG | - | chr5_4:9742758-9742777 | Msa0836250:intron | 35.0% | |
| GTAGTTGTCTTGAGATTGAA+GGG | + | chr5_4:9742814-9742833 | None:intergenic | 35.0% | |
| CTACGTATGTCATTGTGATT+TGG | + | chr5_4:9742877-9742896 | None:intergenic | 35.0% | |
| TGCGATCATGTCAAATTTAC+CGG | - | chr5_4:9742940-9742959 | Msa0836250:intron | 35.0% | |
| GAAACAGGAAGATACATTAC+AGG | - | chr5_4:9743457-9743476 | Msa0836250:intron | 35.0% | |
| AACAGGAAGATACATTACAG+GGG | - | chr5_4:9743459-9743478 | Msa0836250:intron | 35.0% | |
| ACACGAGTGAATTTAGATAC+GGG | - | chr5_4:9743566-9743585 | Msa0836250:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr5_4:9744583-9744602 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr5_4:9744583-9744602 | Msa0836250:intron | 35.0% | |
| TTTGCATTAGTCCCAAACTA+AGG | - | chr5_4:9744666-9744685 | Msa0836250:intron | 35.0% | |
| TTGCATTAGTCCCAAACTAA+GGG | - | chr5_4:9744667-9744686 | Msa0836250:intron | 35.0% | |
| AAAAAGTCCATCCCACAAAA+TGG | - | chr5_4:9744778-9744797 | Msa0836250:CDS | 35.0% | |
| !! | ACTGTTCTTAGCATTGATGG+TGG | - | chr5_4:9741182-9741201 | Msa0836250:CDS | 40.0% |
| CTGAAGTTGAGATTCAAGGT+AGG | + | chr5_4:9741243-9741262 | None:intergenic | 40.0% | |
| CTACCTTGAATCTCAACTTC+AGG | - | chr5_4:9741241-9741260 | Msa0836250:intron | 40.0% | |
| !! | CGGTTATTAGCCTTTGGATT+TGG | + | chr5_4:9741454-9741473 | None:intergenic | 40.0% |
| !! | AATGGACGGTTATTAGCCTT+TGG | + | chr5_4:9741460-9741479 | None:intergenic | 40.0% |
| ! | CTTTGGCAGCAAATAATGGA+CGG | + | chr5_4:9741474-9741493 | None:intergenic | 40.0% |
| !!! | GGCAAGTTTTGAAGGTAGAA+TGG | + | chr5_4:9741505-9741524 | None:intergenic | 40.0% |
| ACCCCTCATAAACACAACAA+AGG | - | chr5_4:9741712-9741731 | Msa0836250:intron | 40.0% | |
| ! | GCCTTTGTTGTGTTTATGAG+GGG | + | chr5_4:9741716-9741735 | None:intergenic | 40.0% |
| ! | AACACAACAAAGGCTTTGAC+AGG | - | chr5_4:9741722-9741741 | Msa0836250:intron | 40.0% |
| GACAGGATCCAAGTATAATG+GGG | - | chr5_4:9741739-9741758 | Msa0836250:intron | 40.0% | |
| GAGATACTCCCCATTATACT+TGG | + | chr5_4:9741750-9741769 | None:intergenic | 40.0% | |
| ! | GAGAGTAGTACATCTAAAGC+TGG | + | chr5_4:9742053-9742072 | None:intergenic | 40.0% |
| AATACAAACCTCATTGACGG+TGG | - | chr5_4:9742162-9742181 | Msa0836250:intron | 40.0% | |
| GCTAAGATGGTTGCTAAATG+GGG | - | chr5_4:9742684-9742703 | Msa0836250:intron | 40.0% | |
| CAGTAAAAAGGACAGCGTTA+TGG | + | chr5_4:9742791-9742810 | None:intergenic | 40.0% | |
| GAGATTGAAGGGCAGTAAAA+AGG | + | chr5_4:9742803-9742822 | None:intergenic | 40.0% | |
| GGTAGTTGTCTTGAGATTGA+AGG | + | chr5_4:9742815-9742834 | None:intergenic | 40.0% | |
| ATCTTGGGTTCCAAGAAAGA+TGG | + | chr5_4:9743096-9743115 | None:intergenic | 40.0% | |
| !! | TACGGTGGTTTGTTTGAAAC+AGG | - | chr5_4:9743442-9743461 | Msa0836250:intron | 40.0% |
| ACAGGAAGATACATTACAGG+GGG | - | chr5_4:9743460-9743479 | Msa0836250:intron | 40.0% | |
| !!! | CCTTTTGAGTTCTTCCTCAA+TGG | + | chr5_4:9743621-9743640 | None:intergenic | 40.0% |
| CCATTGAGGAAGAACTCAAA+AGG | - | chr5_4:9743618-9743637 | Msa0836250:intron | 40.0% | |
| !!! | TTACTTGCCATTTTGTGGGA+TGG | + | chr5_4:9744788-9744807 | None:intergenic | 40.0% |
| !! | GTTCTTAGCATTGATGGTGG+AGG | - | chr5_4:9741185-9741204 | Msa0836250:CDS | 45.0% |
| AGGTAGGCAAGAATAACACC+AGG | + | chr5_4:9741227-9741246 | None:intergenic | 45.0% | |
| TTTACAGGAGATAGACGGTG+AGG | - | chr5_4:9741351-9741370 | Msa0836250:intron | 45.0% | |
| !! | TGGATTTGGTGCTGCTAACA+TGG | + | chr5_4:9741440-9741459 | None:intergenic | 45.0% |
| GTTAGCAGCACCAAATCCAA+AGG | - | chr5_4:9741441-9741460 | Msa0836250:intron | 45.0% | |
| ACATGAAAATCTGGTTGGGG+TGG | - | chr5_4:9741618-9741637 | Msa0836250:intron | 45.0% | |
| CATGAAAATCTGGTTGGGGT+GGG | - | chr5_4:9741619-9741638 | Msa0836250:intron | 45.0% | |
| ATGAAAATCTGGTTGGGGTG+GGG | - | chr5_4:9741620-9741639 | Msa0836250:intron | 45.0% | |
| TGGGGGATTTAAGGAGTCTA+GGG | - | chr5_4:9741638-9741657 | Msa0836250:intron | 45.0% | |
| !! | TCCGGTAAAATTCTGGCTCA+AGG | - | chr5_4:9742200-9742219 | Msa0836250:intron | 45.0% |
| ! | CCCTTGAGCCAGAATTTTAC+CGG | + | chr5_4:9742204-9742223 | None:intergenic | 45.0% |
| !! | CCGGTAAAATTCTGGCTCAA+GGG | - | chr5_4:9742201-9742220 | Msa0836250:intron | 45.0% |
| GCGCAAGTACAATGCTAAGA+TGG | - | chr5_4:9742671-9742690 | Msa0836250:intron | 45.0% | |
| !! | CTAAATGGGGTGCATTGACT+TGG | - | chr5_4:9742697-9742716 | Msa0836250:intron | 45.0% |
| !! | GTCTATGAGTATTGGTGGTC+TGG | - | chr5_4:9743068-9743087 | Msa0836250:intron | 45.0% |
| TGGTCTGGATCCATCTTTCT+TGG | - | chr5_4:9743083-9743102 | Msa0836250:intron | 45.0% | |
| !! | TCCAGATAAAGGCACCATTG+AGG | - | chr5_4:9743604-9743623 | Msa0836250:intron | 45.0% |
| TCCTCAATGGTGCCTTTATC+TGG | + | chr5_4:9743608-9743627 | None:intergenic | 45.0% | |
| TGTTTGCATTGCAGGTTTGC+TGG | - | chr5_4:9744730-9744749 | Msa0836250:CDS | 45.0% | |
| !! | CAGGTTTGCTGGTTTACTCT+CGG | - | chr5_4:9744741-9744760 | Msa0836250:CDS | 45.0% |
| !!! | TAAAAGATAATTTTTTTTAT+AGG | - | chr5_4:9742462-9742481 | Msa0836250:CDS | 5.0% |
| !!! | AATTACTTTTATTTTATTTT+AGG | - | chr5_4:9743642-9743661 | Msa0836250:intron | 5.0% |
| !!! | ATTACTTTTATTTTATTTTA+GGG | - | chr5_4:9743643-9743662 | Msa0836250:intron | 5.0% |
| !!! | ATGAATTTTTATATTTTTTA+CGG | + | chr5_4:9743836-9743855 | None:intergenic | 5.0% |
| !!! | TATAAGTAATTTTTTTTTAT+AGG | - | chr5_4:9744538-9744557 | Msa0836250:CDS | 5.0% |
| !!! | ATAAGTAATTTTTTTTTATA+GGG | - | chr5_4:9744539-9744558 | Msa0836250:CDS | 5.0% |
| !! | ATAAGTTATTATAAAATAAA+GGG | + | chr5_4:9744642-9744661 | None:intergenic | 5.0% |
| !! | AATAAGTTATTATAAAATAA+AGG | + | chr5_4:9744643-9744662 | None:intergenic | 5.0% |
| AGATAGACGGTGAGGATGCA+AGG | - | chr5_4:9741359-9741378 | Msa0836250:intron | 50.0% | |
| GTAATTGCCGGGACAAGTAC+AGG | - | chr5_4:9741400-9741419 | Msa0836250:intron | 50.0% | |
| AAACAGGCAGACCTTTGCTG+TGG | + | chr5_4:9741538-9741557 | None:intergenic | 50.0% | |
| TGAAAATCTGGTTGGGGTGG+GGG | - | chr5_4:9741621-9741640 | Msa0836250:intron | 50.0% | |
| GTGGGGGATTTAAGGAGTCT+AGG | - | chr5_4:9741637-9741656 | Msa0836250:intron | 50.0% | |
| AAACCTCATTGACGGTGGTG+TGG | - | chr5_4:9742167-9742186 | Msa0836250:intron | 50.0% | |
| TGGTGTGGCTGCTAACAATC+CGG | - | chr5_4:9742182-9742201 | Msa0836250:intron | 50.0% | |
| GCTTAAGACGGGGACTTTAG+TGG | - | chr5_4:9742484-9742503 | Msa0836250:intron | 50.0% | |
| AGGAAACCAGATGGGAGAAG+TGG | - | chr5_4:9742582-9742601 | Msa0836250:intron | 50.0% | |
| GGAAACCAGATGGGAGAAGT+GGG | - | chr5_4:9742583-9742602 | Msa0836250:intron | 50.0% | |
| GAAACCAGATGGGAGAAGTG+GGG | - | chr5_4:9742584-9742603 | Msa0836250:intron | 50.0% | |
| TTATCCCCACTTCTCCCATC+TGG | + | chr5_4:9742591-9742610 | None:intergenic | 50.0% | |
| AATTGCACGCACGCTTGTGT+AGG | + | chr5_4:9743244-9743263 | None:intergenic | 50.0% | |
| !! | ATTGATGGTGGAGGCGTCAG+AGG | - | chr5_4:9741194-9741213 | Msa0836250:CDS | 55.0% |
| GGCGTCAGAGGAATCATTCC+TGG | - | chr5_4:9741206-9741225 | Msa0836250:intron | 55.0% | |
| ATTGCCGGGACAAGTACAGG+TGG | - | chr5_4:9741403-9741422 | Msa0836250:intron | 55.0% | |
| GAGACCACCTGTACTTGTCC+CGG | + | chr5_4:9741410-9741429 | None:intergenic | 55.0% | |
| TGGTTGGGGTGGGGGATTTA+AGG | - | chr5_4:9741629-9741648 | Msa0836250:intron | 55.0% | |
| CAGCCACACCACCGTCAATG+AGG | + | chr5_4:9742173-9742192 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 9741152 | 9744807 | 9741152 | ID=Msa0836250;Name=Msa0836250 |
| chr5_4 | mRNA | 9741152 | 9744807 | 9741152 | ID=Msa0836250-mRNA-1;Parent=Msa0836250;Name=Msa0836250-mRNA-1;_AED=0.23;_eAED=0.27;_QI=0|0|0|0.85|1|1|7|0|371 |
| chr5_4 | exon | 9744697 | 9744807 | 9744697 | ID=Msa0836250-mRNA-1:exon:4361;Parent=Msa0836250-mRNA-1 |
| chr5_4 | exon | 9744414 | 9744601 | 9744414 | ID=Msa0836250-mRNA-1:exon:4360;Parent=Msa0836250-mRNA-1 |
| chr5_4 | exon | 9744073 | 9744259 | 9744073 | ID=Msa0836250-mRNA-1:exon:4359;Parent=Msa0836250-mRNA-1 |
| chr5_4 | exon | 9743756 | 9743842 | 9743756 | ID=Msa0836250-mRNA-1:exon:4358;Parent=Msa0836250-mRNA-1 |
| chr5_4 | exon | 9743114 | 9743416 | 9743114 | ID=Msa0836250-mRNA-1:exon:4357;Parent=Msa0836250-mRNA-1 |
| chr5_4 | exon | 9742320 | 9742495 | 9742320 | ID=Msa0836250-mRNA-1:exon:4356;Parent=Msa0836250-mRNA-1 |
| chr5_4 | exon | 9741152 | 9741215 | 9741152 | ID=Msa0836250-mRNA-1:exon:4355;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9744697 | 9744807 | 9744697 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9744414 | 9744601 | 9744414 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9744073 | 9744259 | 9744073 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9743756 | 9743842 | 9743756 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9743114 | 9743416 | 9743114 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9742320 | 9742495 | 9742320 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| chr5_4 | CDS | 9741152 | 9741215 | 9741152 | ID=Msa0836250-mRNA-1:cds;Parent=Msa0836250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
