Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741360 | XP_003617368.1 | 93.446 | 473 | 28 | 2 | 1 | 472 | 1 | 471 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741360 | sp|A1XWY7|CFAT_PETHY | 54.468 | 470 | 190 | 11 | 3 | 470 | 1 | 448 | 8.26e-165 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741360 | G7K3A2 | 93.446 | 473 | 28 | 2 | 1 | 472 | 1 | 471 | 0.0 | 920 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0741360 | 0.821220 | 4.532720e-53 | -8.615850e-47 |
| Msa0027860 | Msa0741360 | 0.808832 | 2.551883e-50 | -8.615850e-47 |
| Msa0059880 | Msa0741360 | 0.806904 | 6.556598e-50 | -8.615850e-47 |
| Msa0063540 | Msa0741360 | 0.800434 | 1.443783e-48 | -8.615850e-47 |
| Msa0074620 | Msa0741360 | 0.806691 | 7.275372e-50 | -8.615850e-47 |
| Msa0631700 | Msa0741360 | 0.829993 | 3.771052e-55 | -8.615850e-47 |
| Msa0633940 | Msa0741360 | 0.875685 | 2.536601e-68 | -8.615850e-47 |
| Msa0633970 | Msa0741360 | 0.875064 | 4.134056e-68 | -8.615850e-47 |
| Msa0639400 | Msa0741360 | 0.801722 | 7.875539e-49 | -8.615850e-47 |
| Msa0639410 | Msa0741360 | 0.821587 | 3.730802e-53 | -8.615850e-47 |
| Msa0643190 | Msa0741360 | 0.802766 | 4.800463e-49 | -8.615850e-47 |
| Msa0670360 | Msa0741360 | 0.818335 | 2.068373e-52 | -8.615850e-47 |
| Msa0678620 | Msa0741360 | 0.805933 | 1.050834e-49 | -8.615850e-47 |
| Msa0682420 | Msa0741360 | 0.800200 | 1.611175e-48 | -8.615850e-47 |
| Msa0715220 | Msa0741360 | 0.816292 | 5.961577e-52 | -8.615850e-47 |
| Msa0735130 | Msa0741360 | 0.808917 | 2.446675e-50 | -8.615850e-47 |
| Msa0741360 | Msa0757120 | 0.826698 | 2.351566e-54 | -8.615850e-47 |
| Msa0741360 | Msa0768670 | 0.805937 | 1.048585e-49 | -8.615850e-47 |
| Msa0741360 | Msa0777060 | 0.808965 | 2.389783e-50 | -8.615850e-47 |
| Msa0741360 | Msa0777070 | 0.816944 | 4.259827e-52 | -8.615850e-47 |
| Msa0741360 | Msa0783120 | 0.816163 | 6.372387e-52 | -8.615850e-47 |
| Msa0741360 | Msa0798150 | 0.823358 | 1.445972e-53 | -8.615850e-47 |
| Msa0741360 | Msa0814160 | 0.841957 | 3.467855e-58 | -8.615850e-47 |
| Msa0741360 | Msa0822400 | 0.866872 | 2.074504e-65 | -8.615850e-47 |
| Msa0741360 | Msa0836250 | 0.808006 | 3.828643e-50 | -8.615850e-47 |
| Msa0741360 | Msa0854840 | 0.832017 | 1.201267e-55 | -8.615850e-47 |
| Msa0741360 | Msa0861730 | 0.836341 | 9.904290e-57 | -8.615850e-47 |
| Msa0741360 | Msa0867080 | 0.812342 | 4.448367e-51 | -8.615850e-47 |
| Msa0741360 | Msa0893840 | 0.817603 | 3.026495e-52 | -8.615850e-47 |
| Msa0741360 | Msa0895420 | 0.815060 | 1.121832e-51 | -8.615850e-47 |
| Msa0741360 | Msa0896920 | 0.849251 | 3.645281e-60 | -8.615850e-47 |
| Msa0741360 | Msa0896950 | 0.803814 | 2.913029e-49 | -8.615850e-47 |
| Msa0741360 | Msa0898970 | 0.815046 | 1.129932e-51 | -8.615850e-47 |
| Msa0741360 | Msa0916290 | 0.815452 | 9.177176e-52 | -8.615850e-47 |
| Msa0741360 | Msa0933590 | 0.805991 | 1.021569e-49 | -8.615850e-47 |
| Msa0741360 | Msa0941120 | 0.808239 | 3.414926e-50 | -8.615850e-47 |
| Msa0741360 | Msa0946010 | 0.801123 | 1.044713e-48 | -8.615850e-47 |
| Msa0741360 | Msa0964510 | 0.801489 | 8.789245e-49 | -8.615850e-47 |
| Msa0741360 | Msa0987640 | 0.807772 | 4.293316e-50 | -8.615850e-47 |
| Msa0741360 | Msa0996980 | 0.816808 | 4.568709e-52 | -8.615850e-47 |
| Msa0741360 | Msa1006030 | 0.803300 | 3.723899e-49 | -8.615850e-47 |
| Msa0741360 | Msa1006170 | 0.853478 | 2.326871e-61 | -8.615850e-47 |
| Msa0741360 | Msa1018590 | 0.820057 | 8.388269e-53 | -8.615850e-47 |
| Msa0741360 | Msa1022490 | 0.810526 | 1.103374e-50 | -8.615850e-47 |
| Msa0741360 | Msa1022510 | 0.821790 | 3.347468e-53 | -8.615850e-47 |
| Msa0741360 | Msa1024350 | 0.834190 | 3.459520e-56 | -8.615850e-47 |
| Msa0741360 | Msa1026050 | 0.828608 | 8.178014e-55 | -8.615850e-47 |
| Msa0741360 | Msa1048350 | 0.832726 | 8.018920e-56 | -8.615850e-47 |
| Msa0741360 | Msa1061670 | 0.836617 | 8.425588e-57 | -8.615850e-47 |
| Msa0741360 | Msa1064940 | 0.818845 | 1.584946e-52 | -8.615850e-47 |
| Msa0741360 | Msa1098100 | 0.805571 | 1.252030e-49 | -8.615850e-47 |
| Msa0741360 | Msa1100030 | 0.822748 | 2.006729e-53 | -8.615850e-47 |
| Msa0741360 | Msa1106680 | 0.827769 | 1.303195e-54 | -8.615850e-47 |
| Msa0741360 | Msa1106960 | 0.831071 | 2.054928e-55 | -8.615850e-47 |
| Msa0741360 | Msa1120680 | 0.808857 | 2.520569e-50 | -8.615850e-47 |
| Msa0741360 | Msa1138110 | 0.805519 | 1.283706e-49 | -8.615850e-47 |
| Msa0741360 | Msa1147030 | 0.874465 | 6.611991e-68 | -8.615850e-47 |
| Msa0741360 | Msa1148210 | 0.801921 | 7.167975e-49 | -8.615850e-47 |
| Msa0741360 | Msa1156240 | 0.836409 | 9.515281e-57 | -8.615850e-47 |
| Msa0741360 | Msa1170340 | 0.817484 | 3.220557e-52 | -8.615850e-47 |
| Msa0741360 | Msa1181090 | 0.808691 | 2.735345e-50 | -8.615850e-47 |
| Msa0741360 | Msa1231720 | 0.808983 | 2.368985e-50 | -8.615850e-47 |
| Msa0741360 | Msa1236680 | 0.800002 | 1.767546e-48 | -8.615850e-47 |
| Msa0741360 | Msa1245800 | 0.805924 | 1.055529e-49 | -8.615850e-47 |
| Msa0741360 | Msa1279750 | 0.803707 | 3.065788e-49 | -8.615850e-47 |
| Msa0741360 | Msa1294020 | 0.818327 | 2.076677e-52 | -8.615850e-47 |
| Msa0741360 | Msa1350870 | 0.810155 | 1.326886e-50 | -8.615850e-47 |
| Msa0741360 | Msa1355340 | 0.818819 | 1.606796e-52 | -8.615850e-47 |
| Msa0741360 | Msa1411550 | 0.850000 | 2.253120e-60 | -8.615850e-47 |
| Msa0741360 | Msa1445900 | 0.805626 | 1.218789e-49 | -8.615850e-47 |
| Msa0741360 | Msa1459610 | 0.826294 | 2.935683e-54 | -8.615850e-47 |
| Msa0134570 | Msa0741360 | 0.813439 | 2.558763e-51 | -8.615850e-47 |
| Msa0150910 | Msa0741360 | 0.812509 | 4.090928e-51 | -8.615850e-47 |
| Msa0150920 | Msa0741360 | 0.835895 | 1.285407e-56 | -8.615850e-47 |
| Msa0163340 | Msa0741360 | 0.811457 | 6.934550e-51 | -8.615850e-47 |
| Msa0209060 | Msa0741360 | 0.808066 | 3.717283e-50 | -8.615850e-47 |
| Msa0212550 | Msa0741360 | 0.800332 | 1.514434e-48 | -8.615850e-47 |
| Msa0366510 | Msa0741360 | 0.851523 | 8.395960e-61 | -8.615850e-47 |
| Msa0374040 | Msa0741360 | 0.816222 | 6.181415e-52 | -8.615850e-47 |
| Msa0391270 | Msa0741360 | 0.801266 | 9.764948e-49 | -8.615850e-47 |
| Msa0396700 | Msa0741360 | 0.804613 | 1.985859e-49 | -8.615850e-47 |
| Msa0414480 | Msa0741360 | 0.819508 | 1.119732e-52 | -8.615850e-47 |
| Msa0418160 | Msa0741360 | 0.812196 | 4.789154e-51 | -8.615850e-47 |
| Msa0444250 | Msa0741360 | 0.831417 | 1.689113e-55 | -8.615850e-47 |
| Msa0444400 | Msa0741360 | 0.801828 | 7.490020e-49 | -8.615850e-47 |
| Msa0459300 | Msa0741360 | 0.810150 | 1.329651e-50 | -8.615850e-47 |
| Msa0464310 | Msa0741360 | 0.823436 | 1.386687e-53 | -8.615850e-47 |
| Msa0274260 | Msa0741360 | 0.803205 | 3.895666e-49 | -8.615850e-47 |
| Msa0278460 | Msa0741360 | 0.800919 | 1.149932e-48 | -8.615850e-47 |
| Msa0288540 | Msa0741360 | 0.808216 | 3.453199e-50 | -8.615850e-47 |
| Msa0326770 | Msa0741360 | 0.800417 | 1.455312e-48 | -8.615850e-47 |
| Msa0328090 | Msa0741360 | 0.802516 | 5.406558e-49 | -8.615850e-47 |
| Msa0490060 | Msa0741360 | 0.813819 | 2.109898e-51 | -8.615850e-47 |
| Msa0491800 | Msa0741360 | 0.800077 | 1.706603e-48 | -8.615850e-47 |
| Msa0491830 | Msa0741360 | 0.804730 | 1.877121e-49 | -8.615850e-47 |
| Msa0506160 | Msa0741360 | 0.818824 | 1.601814e-52 | -8.615850e-47 |
| Msa0515130 | Msa0741360 | 0.838425 | 2.897424e-57 | -8.615850e-47 |
| Msa0515150 | Msa0741360 | 0.820738 | 5.854272e-53 | -8.615850e-47 |
| Msa0535570 | Msa0741360 | 0.823746 | 1.173460e-53 | -8.615850e-47 |
| Msa0538440 | Msa0741360 | 0.819534 | 1.104296e-52 | -8.615850e-47 |
| Msa0538530 | Msa0741360 | 0.808455 | 3.070760e-50 | -8.615850e-47 |
| Msa0543740 | Msa0741360 | 0.807215 | 5.635712e-50 | -8.615850e-47 |
| Msa0554660 | Msa0741360 | 0.810882 | 9.238887e-51 | -8.615850e-47 |
| Msa0555920 | Msa0741360 | 0.803176 | 3.950515e-49 | -8.615850e-47 |
| Msa0591490 | Msa0741360 | 0.837428 | 5.229522e-57 | -8.615850e-47 |
| Msa0593870 | Msa0741360 | 0.881749 | 1.852415e-70 | -8.615850e-47 |
| Msa0594630 | Msa0741360 | 0.812887 | 3.381908e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741360 | MtrunA17_Chr5g0442701 | 93.446 | 473 | 28 | 2 | 1 | 472 | 1 | 471 | 0.0 | 920 |
| Msa0741360 | MtrunA17_Chr5g0442691 | 92.178 | 473 | 34 | 2 | 1 | 472 | 24 | 494 | 0.0 | 910 |
| Msa0741360 | MtrunA17_Chr5g0442721 | 80.127 | 473 | 93 | 1 | 1 | 472 | 1 | 473 | 0.0 | 781 |
| Msa0741360 | MtrunA17_Chr3g0095731 | 68.085 | 470 | 129 | 7 | 10 | 470 | 11 | 468 | 0.0 | 629 |
| Msa0741360 | MtrunA17_Chr3g0095721 | 64.894 | 470 | 148 | 5 | 10 | 470 | 11 | 472 | 0.0 | 612 |
| Msa0741360 | MtrunA17_Chr5g0408911 | 36.867 | 415 | 234 | 12 | 29 | 440 | 39 | 428 | 1.18e-72 | 236 |
| Msa0741360 | MtrunA17_Chr8g0386141 | 27.706 | 462 | 285 | 18 | 7 | 458 | 4 | 426 | 4.42e-34 | 133 |
| Msa0741360 | MtrunA17_Chr8g0371821 | 24.945 | 457 | 296 | 15 | 10 | 455 | 3 | 423 | 1.39e-33 | 131 |
| Msa0741360 | MtrunA17_Chr2g0334001 | 25.486 | 463 | 289 | 18 | 10 | 455 | 3 | 426 | 3.11e-31 | 124 |
| Msa0741360 | MtrunA17_Chr4g0001861 | 23.913 | 414 | 278 | 12 | 10 | 414 | 3 | 388 | 3.25e-29 | 119 |
| Msa0741360 | MtrunA17_Chr3g0132001 | 26.854 | 391 | 242 | 14 | 31 | 413 | 35 | 389 | 2.99e-28 | 116 |
| Msa0741360 | MtrunA17_Chr4g0054081 | 25.376 | 465 | 298 | 15 | 23 | 465 | 19 | 456 | 3.67e-28 | 116 |
| Msa0741360 | MtrunA17_Chr4g0072041 | 23.861 | 461 | 309 | 12 | 23 | 465 | 24 | 460 | 2.16e-27 | 114 |
| Msa0741360 | MtrunA17_Chr7g0253541 | 29.032 | 372 | 216 | 15 | 66 | 412 | 60 | 408 | 5.76e-27 | 113 |
| Msa0741360 | MtrunA17_Chr5g0433641 | 25.253 | 396 | 249 | 13 | 66 | 447 | 65 | 427 | 2.06e-26 | 111 |
| Msa0741360 | MtrunA17_Chr1g0165681 | 26.617 | 402 | 232 | 14 | 63 | 436 | 61 | 427 | 2.44e-26 | 111 |
| Msa0741360 | MtrunA17_Chr7g0273721 | 25.592 | 422 | 264 | 16 | 8 | 415 | 9 | 394 | 5.01e-26 | 110 |
| Msa0741360 | MtrunA17_Chr7g0224391 | 25.653 | 421 | 267 | 15 | 4 | 414 | 9 | 393 | 1.24e-25 | 108 |
| Msa0741360 | MtrunA17_Chr7g0273761 | 26.201 | 458 | 281 | 18 | 8 | 446 | 380 | 799 | 5.39e-25 | 108 |
| Msa0741360 | MtrunA17_Chr7g0273761 | 24.549 | 277 | 177 | 9 | 140 | 415 | 32 | 277 | 1.71e-14 | 76.3 |
| Msa0741360 | MtrunA17_Chr7g0273791 | 23.929 | 397 | 258 | 11 | 63 | 447 | 62 | 426 | 6.42e-25 | 107 |
| Msa0741360 | MtrunA17_Chr1g0191081 | 26.273 | 373 | 229 | 15 | 63 | 424 | 70 | 407 | 2.36e-24 | 105 |
| Msa0741360 | MtrunA17_Chr1g0165661 | 25.310 | 403 | 236 | 15 | 63 | 436 | 61 | 427 | 3.78e-24 | 104 |
| Msa0741360 | MtrunA17_Chr7g0273781 | 24.301 | 465 | 295 | 16 | 1 | 447 | 34 | 459 | 4.32e-24 | 104 |
| Msa0741360 | MtrunA17_Chr7g0273731 | 24.479 | 384 | 238 | 13 | 63 | 430 | 145 | 492 | 6.93e-23 | 101 |
| Msa0741360 | MtrunA17_Chr1g0165671 | 25.250 | 400 | 238 | 14 | 63 | 436 | 79 | 443 | 1.11e-22 | 100 |
| Msa0741360 | MtrunA17_Chr2g0306321 | 24.816 | 407 | 252 | 15 | 29 | 415 | 40 | 412 | 1.29e-22 | 100 |
| Msa0741360 | MtrunA17_Chr3g0087401 | 24.312 | 436 | 287 | 13 | 31 | 446 | 23 | 435 | 8.57e-22 | 97.8 |
| Msa0741360 | MtrunA17_Chr2g0311401 | 26.300 | 327 | 196 | 14 | 139 | 455 | 5 | 296 | 8.80e-22 | 95.5 |
| Msa0741360 | MtrunA17_Chr7g0253501 | 27.848 | 395 | 233 | 19 | 66 | 429 | 55 | 428 | 9.64e-22 | 97.8 |
| Msa0741360 | MtrunA17_Chr7g0253531 | 25.916 | 382 | 227 | 17 | 66 | 414 | 55 | 413 | 2.56e-21 | 96.3 |
| Msa0741360 | MtrunA17_Chr2g0283361 | 24.129 | 402 | 258 | 17 | 24 | 413 | 18 | 384 | 4.37e-19 | 89.4 |
| Msa0741360 | MtrunA17_Chr4g0027071 | 24.176 | 455 | 297 | 18 | 17 | 451 | 19 | 445 | 2.92e-18 | 87.0 |
| Msa0741360 | MtrunA17_Chr3g0134041 | 22.651 | 415 | 257 | 11 | 27 | 413 | 19 | 397 | 4.74e-18 | 86.3 |
| Msa0741360 | MtrunA17_Chr3g0123061 | 23.908 | 435 | 254 | 20 | 6 | 426 | 1 | 372 | 1.38e-17 | 84.7 |
| Msa0741360 | MtrunA17_Chr5g0438701 | 22.619 | 420 | 269 | 16 | 8 | 414 | 1 | 377 | 1.85e-16 | 81.3 |
| Msa0741360 | MtrunA17_Chr3g0134091 | 23.292 | 322 | 198 | 12 | 49 | 348 | 48 | 342 | 2.80e-16 | 80.9 |
| Msa0741360 | MtrunA17_Chr3g0134071 | 23.450 | 371 | 232 | 11 | 61 | 411 | 65 | 403 | 6.08e-16 | 80.1 |
| Msa0741360 | MtrunA17_Chr3g0113181 | 23.454 | 388 | 235 | 14 | 60 | 413 | 60 | 419 | 1.35e-15 | 79.0 |
| Msa0741360 | MtrunA17_Chr7g0252731 | 25.652 | 460 | 254 | 20 | 7 | 434 | 14 | 417 | 1.53e-15 | 78.6 |
| Msa0741360 | MtrunA17_Chr3g0141851 | 22.143 | 420 | 250 | 15 | 18 | 411 | 20 | 388 | 4.33e-15 | 77.4 |
| Msa0741360 | MtrunA17_Chr8g0374911 | 24.069 | 403 | 241 | 16 | 36 | 413 | 58 | 420 | 4.48e-14 | 74.3 |
| Msa0741360 | MtrunA17_Chr5g0438681 | 22.803 | 421 | 266 | 14 | 8 | 414 | 1 | 376 | 1.81e-13 | 72.0 |
| Msa0741360 | MtrunA17_Chr3g0125001 | 24.000 | 400 | 236 | 17 | 36 | 413 | 32 | 385 | 3.33e-13 | 71.2 |
| Msa0741360 | MtrunA17_Chr4g0053061 | 23.077 | 403 | 245 | 15 | 36 | 413 | 65 | 427 | 2.00e-12 | 68.9 |
| Msa0741360 | MtrunA17_Chr8g0354371 | 23.971 | 413 | 249 | 15 | 23 | 413 | 22 | 391 | 2.26e-12 | 68.9 |
| Msa0741360 | MtrunA17_Chr7g0270771 | 29.167 | 144 | 91 | 3 | 66 | 202 | 55 | 194 | 2.77e-12 | 67.0 |
| Msa0741360 | MtrunA17_Chr3g0134121 | 21.409 | 369 | 231 | 16 | 9 | 348 | 5 | 343 | 3.68e-11 | 65.1 |
| Msa0741360 | MtrunA17_Chr4g0010311 | 23.864 | 440 | 272 | 16 | 49 | 466 | 43 | 441 | 4.58e-11 | 64.7 |
| Msa0741360 | MtrunA17_Chr3g0113821 | 24.661 | 369 | 222 | 15 | 66 | 414 | 60 | 392 | 9.67e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741360 | AT1G32910.1 | 58.351 | 473 | 162 | 12 | 8 | 470 | 11 | 458 | 1.49e-179 | 511 |
| Msa0741360 | AT1G78990.1 | 56.838 | 468 | 172 | 10 | 8 | 470 | 11 | 453 | 9.53e-179 | 508 |
| Msa0741360 | AT5G16410.1 | 51.368 | 475 | 190 | 14 | 8 | 470 | 34 | 479 | 4.09e-159 | 459 |
| Msa0741360 | AT1G31490.1 | 36.878 | 442 | 237 | 12 | 8 | 440 | 4 | 412 | 6.25e-78 | 250 |
| Msa0741360 | AT5G48930.1 | 25.163 | 461 | 298 | 17 | 8 | 455 | 1 | 427 | 1.06e-35 | 137 |
| Msa0741360 | AT5G41040.2 | 25.316 | 395 | 248 | 14 | 31 | 414 | 38 | 396 | 1.73e-27 | 114 |
| Msa0741360 | AT5G41040.1 | 25.316 | 395 | 248 | 14 | 31 | 414 | 54 | 412 | 2.58e-27 | 114 |
| Msa0741360 | AT2G19070.1 | 24.034 | 466 | 310 | 16 | 18 | 465 | 12 | 451 | 7.70e-27 | 112 |
| Msa0741360 | AT3G03480.1 | 25.862 | 464 | 269 | 19 | 6 | 436 | 15 | 436 | 6.18e-26 | 110 |
| Msa0741360 | AT5G57840.1 | 26.282 | 468 | 280 | 19 | 8 | 451 | 1 | 427 | 6.47e-26 | 110 |
| Msa0741360 | AT3G48720.1 | 27.089 | 395 | 239 | 13 | 31 | 414 | 30 | 386 | 8.03e-25 | 106 |
| Msa0741360 | AT5G17540.1 | 25.000 | 468 | 264 | 19 | 4 | 439 | 3 | 415 | 1.69e-24 | 106 |
| Msa0741360 | AT3G50270.1 | 27.394 | 376 | 218 | 16 | 60 | 413 | 56 | 398 | 7.52e-21 | 95.1 |
| Msa0741360 | AT1G27620.1 | 22.195 | 401 | 265 | 13 | 66 | 455 | 58 | 422 | 1.57e-20 | 94.4 |
| Msa0741360 | AT5G63560.1 | 25.672 | 409 | 243 | 15 | 19 | 413 | 20 | 381 | 3.31e-20 | 93.2 |
| Msa0741360 | AT3G50280.1 | 25.000 | 428 | 261 | 18 | 9 | 413 | 3 | 393 | 5.38e-20 | 92.8 |
| Msa0741360 | AT1G24430.1 | 25.472 | 424 | 248 | 18 | 8 | 413 | 3 | 376 | 9.28e-20 | 92.0 |
| Msa0741360 | AT1G65450.1 | 25.926 | 405 | 248 | 16 | 31 | 418 | 40 | 409 | 9.65e-19 | 89.0 |
| Msa0741360 | AT3G30280.1 | 25.513 | 439 | 265 | 14 | 8 | 431 | 4 | 395 | 1.12e-17 | 85.5 |
| Msa0741360 | AT1G28680.1 | 25.298 | 419 | 264 | 19 | 12 | 413 | 1 | 387 | 2.94e-17 | 84.3 |
| Msa0741360 | AT5G07860.1 | 21.583 | 417 | 249 | 15 | 27 | 413 | 30 | 398 | 3.12e-17 | 84.3 |
| Msa0741360 | AT3G26040.1 | 22.654 | 437 | 250 | 15 | 8 | 413 | 1 | 380 | 5.21e-17 | 83.6 |
| Msa0741360 | AT5G38130.1 | 24.297 | 391 | 238 | 16 | 60 | 429 | 73 | 426 | 4.07e-16 | 80.9 |
| Msa0741360 | AT5G01210.1 | 25.393 | 382 | 200 | 15 | 79 | 413 | 75 | 418 | 6.36e-15 | 77.4 |
| Msa0741360 | AT5G07080.1 | 23.913 | 368 | 238 | 10 | 60 | 413 | 64 | 403 | 7.43e-15 | 77.0 |
| Msa0741360 | AT5G47950.1 | 23.810 | 420 | 254 | 15 | 8 | 414 | 4 | 370 | 8.34e-15 | 76.6 |
| Msa0741360 | AT3G50300.1 | 23.784 | 370 | 231 | 15 | 63 | 413 | 56 | 393 | 1.22e-14 | 76.3 |
| Msa0741360 | AT4G15390.1 | 23.404 | 423 | 270 | 15 | 8 | 414 | 6 | 390 | 2.85e-14 | 75.1 |
| Msa0741360 | AT4G15390.2 | 23.404 | 423 | 270 | 15 | 8 | 414 | 6 | 390 | 2.85e-14 | 75.1 |
| Msa0741360 | AT5G42830.1 | 23.352 | 364 | 234 | 13 | 66 | 413 | 64 | 398 | 8.53e-14 | 73.6 |
| Msa0741360 | AT2G25150.1 | 22.192 | 365 | 242 | 11 | 63 | 413 | 64 | 400 | 1.30e-13 | 73.2 |
| Msa0741360 | AT1G24420.2 | 23.129 | 441 | 260 | 17 | 6 | 419 | 1 | 389 | 1.37e-13 | 73.2 |
| Msa0741360 | AT1G24420.1 | 23.129 | 441 | 260 | 17 | 6 | 419 | 1 | 389 | 1.37e-13 | 73.2 |
| Msa0741360 | AT5G67160.1 | 24.424 | 434 | 254 | 20 | 59 | 472 | 49 | 428 | 4.28e-13 | 71.6 |
| Msa0741360 | AT3G50290.1 | 24.286 | 280 | 177 | 11 | 136 | 410 | 20 | 269 | 3.60e-11 | 64.3 |
Find 127 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGATTATGAATTCATATTT+TGG | 0.139298 | 5_1:-61040722 | Msa0741360:CDS |
| TTCTGCTTTCTTGTGGAAAA+TGG | 0.174817 | 5_1:-61040846 | Msa0741360:CDS |
| CCAGAGTCGAAGGTTGATTT+TGG | 0.189640 | 5_1:-61040458 | Msa0741360:CDS |
| TAGTATATGCGACTTATTAT+TGG | 0.243557 | 5_1:+61040956 | None:intergenic |
| AGCACACCATGTTTCTTCTT+TGG | 0.268793 | 5_1:+61041576 | None:intergenic |
| GTTTCTTATTATGCCTTTGC+TGG | 0.282844 | 5_1:-61041741 | Msa0741360:CDS |
| TTAATATCAGAGTCAAATTC+AGG | 0.299615 | 5_1:+61040986 | None:intergenic |
| ACATGGTGTGCTTGCTGTTC+AGG | 0.312822 | 5_1:-61041565 | Msa0741360:intron |
| GGATGGAAGGTGGGCGTCGT+GGG | 0.321410 | 5_1:+61041065 | None:intergenic |
| AGTATATGCGACTTATTATT+GGG | 0.330800 | 5_1:+61040957 | None:intergenic |
| AAGAACACACCGACATCAAC+AGG | 0.337593 | 5_1:+61041846 | None:intergenic |
| ATCATTGGGCTGAGCCATTT+CGG | 0.339987 | 5_1:+61041141 | None:intergenic |
| TAAGGGACACTTGCACTTCA+TGG | 0.343370 | 5_1:-61040318 | Msa0741360:CDS |
| GGTGACAGAGGAGCATTTCT+TGG | 0.346724 | 5_1:-61040597 | Msa0741360:CDS |
| ATTTCTTGGGTTTAATAGAT+TGG | 0.349608 | 5_1:-61040583 | Msa0741360:CDS |
| GAAGAGCATCGTCCAGTTCC+TGG | 0.354253 | 5_1:-61040557 | Msa0741360:CDS |
| TGGATGGAAGGTGGGCGTCG+TGG | 0.357861 | 5_1:+61041064 | None:intergenic |
| TGCCAATGCCAAGCCCTAAA+AGG | 0.358606 | 5_1:-61040373 | Msa0741360:CDS |
| TTTCCTTGGGGAGGTAGTGC+TGG | 0.358995 | 5_1:-61040404 | Msa0741360:CDS |
| AAGGAACATGTTTGCAGAAT+AGG | 0.360809 | 5_1:+61041174 | None:intergenic |
| TTCCCTTCTACAGTTTCATC+TGG | 0.371632 | 5_1:+61041606 | None:intergenic |
| CGAAAACAAGGTTGCGTTGT+TGG | 0.373331 | 5_1:+61041103 | None:intergenic |
| ATTTCTTTAGACCAGTCTCT+TGG | 0.380544 | 5_1:-61040280 | Msa0741360:CDS |
| TTTCTTGGGTTTAATAGATT+GGG | 0.393187 | 5_1:-61040582 | Msa0741360:CDS |
| CCAAAATCAACCTTCGACTC+TGG | 0.403209 | 5_1:+61040458 | None:intergenic |
| TCAGAGTCAAATTCAGGTTC+AGG | 0.411350 | 5_1:+61040992 | None:intergenic |
| CAAACATGTTCCTTGTATCA+TGG | 0.413069 | 5_1:-61041165 | Msa0741360:CDS |
| CTAATCGCTAAAATGTGTAT+TGG | 0.419429 | 5_1:-61041975 | None:intergenic |
| TTTCTTTAGACCAGTCTCTT+GGG | 0.423523 | 5_1:-61040279 | Msa0741360:CDS |
| ATCCTTGCCAATCCAGGAAC+TGG | 0.426912 | 5_1:+61040545 | None:intergenic |
| CCTTGTATCATGGGCCGAAA+TGG | 0.428090 | 5_1:-61041155 | Msa0741360:CDS |
| CCAACATTTGTGGTATCTTC+AGG | 0.429306 | 5_1:-61040491 | Msa0741360:CDS |
| ATTAAATCAAGGTTTGATAG+TGG | 0.431310 | 5_1:+61041876 | None:intergenic |
| GAAAACAAGGTTGCGTTGTT+GGG | 0.433945 | 5_1:+61041104 | None:intergenic |
| AATCCAGATGAAACTGTAGA+AGG | 0.442984 | 5_1:-61041609 | Msa0741360:CDS |
| GTGACAGAGGAGCATTTCTT+GGG | 0.453426 | 5_1:-61040596 | Msa0741360:CDS |
| ATGAAGTGCAAGTGTCCCTT+AGG | 0.455932 | 5_1:+61040320 | None:intergenic |
| AGGATTTATTGTGGTAGTAC+TGG | 0.462497 | 5_1:-61040527 | Msa0741360:CDS |
| TTTCCACAAGAAAGCAGAAA+AGG | 0.464789 | 5_1:+61040850 | None:intergenic |
| CGCTACCAATGCAAGAGCAT+TGG | 0.468968 | 5_1:-61041902 | Msa0741360:CDS |
| GCTCTACATGCACCTTCCTA+AGG | 0.469205 | 5_1:-61040336 | Msa0741360:CDS |
| GTCTAAAGAAATGAGGAGCC+TGG | 0.472034 | 5_1:+61040291 | None:intergenic |
| TGGGTGCCAGTAGTAATTAT+AGG | 0.473421 | 5_1:+61041810 | None:intergenic |
| TATGACCAACGAGGAAATAG+TGG | 0.494458 | 5_1:-61041931 | Msa0741360:CDS |
| AGCTGCCACTATTTCCTCGT+TGG | 0.494647 | 5_1:+61041926 | None:intergenic |
| CAATAAATCCTTGCCAATCC+AGG | 0.495236 | 5_1:+61040539 | None:intergenic |
| GATGAAATGTGGTGGATTAG+TGG | 0.498028 | 5_1:-61041230 | Msa0741360:CDS |
| GGCACCCACCATAGCATTGT+GGG | 0.501789 | 5_1:-61041795 | Msa0741360:CDS |
| GGTTGATAATCCGCTATGTT+GGG | 0.513429 | 5_1:-61040654 | Msa0741360:CDS |
| TCAAATTCAGGTTCAGGTGG+TGG | 0.515057 | 5_1:+61040998 | None:intergenic |
| CTTGCACTTCATGGAGGCCC+AGG | 0.516007 | 5_1:-61040309 | Msa0741360:CDS |
| CCATTTCGGCCCATGATACA+AGG | 0.516374 | 5_1:+61041155 | None:intergenic |
| ACTACCACCATTGTTTGAGT+TGG | 0.517260 | 5_1:+61040895 | None:intergenic |
| GTGAAGGATGGATGGAAGGT+GGG | 0.517707 | 5_1:+61041056 | None:intergenic |
| GCATCGTCCAGTTCCTGGAT+TGG | 0.519656 | 5_1:-61040552 | Msa0741360:CDS |
| TCAAACATCCCACAATGCTA+TGG | 0.522391 | 5_1:+61041787 | None:intergenic |
| GTCATAAAGTGAAGGATGGA+TGG | 0.526884 | 5_1:+61041048 | None:intergenic |
| TTTGTTAATCTACCACCATA+GGG | 0.527591 | 5_1:+61040683 | None:intergenic |
| TCACTAGCCAACTCAAACAA+TGG | 0.529140 | 5_1:-61040902 | Msa0741360:CDS |
| GGTAGTACTGGTGGAGAAGA+AGG | 0.530503 | 5_1:-61040515 | Msa0741360:CDS |
| TTTCTTGTGGAAAATGGTTG+CGG | 0.534078 | 5_1:-61040840 | Msa0741360:CDS |
| ATCCAGATGAAACTGTAGAA+GGG | 0.535674 | 5_1:-61041608 | Msa0741360:CDS |
| AGTGAAGGATGGATGGAAGG+TGG | 0.539276 | 5_1:+61041055 | None:intergenic |
| AAACATGTTCCTTGTATCAT+GGG | 0.539896 | 5_1:-61041164 | Msa0741360:CDS |
| TGGTTGATAATCCGCTATGT+TGG | 0.541576 | 5_1:-61040655 | Msa0741360:CDS |
| AGAAGAAGGACCAACATTTG+TGG | 0.543509 | 5_1:-61040501 | Msa0741360:CDS |
| TGAAGTCGTTGCTAATTCCA+TGG | 0.543846 | 5_1:-61041718 | Msa0741360:CDS |
| ACAAACACTAATATTAATTG+AGG | 0.550824 | 5_1:+61040249 | None:intergenic |
| ATTTATTGTGGTAGTACTGG+TGG | 0.550981 | 5_1:-61040524 | Msa0741360:CDS |
| AATTCAGGTTCAGGTGGTGG+AGG | 0.553611 | 5_1:+61041001 | None:intergenic |
| AATAAGCCTATAATTACTAC+TGG | 0.553926 | 5_1:-61041816 | Msa0741360:CDS |
| TTTGGAGGCGGCGGTGACAG+AGG | 0.555868 | 5_1:-61040609 | Msa0741360:CDS |
| GCCCTAAAAGGAATGGTGAC+TGG | 0.557544 | 5_1:-61040361 | Msa0741360:CDS |
| AGGAGGTAATCCCAAGAGAC+TGG | 0.562245 | 5_1:+61040269 | None:intergenic |
| TGGTAGATTAACAAAAGAGC+TGG | 0.565630 | 5_1:-61040675 | Msa0741360:CDS |
| AACATCCCACAATGCTATGG+TGG | 0.566613 | 5_1:+61041790 | None:intergenic |
| CTTGGGTTTAATAGATTGGG+TGG | 0.568431 | 5_1:-61040579 | Msa0741360:CDS |
| CGATTGTTGCAAAGTAACTC+AGG | 0.570367 | 5_1:+61041690 | None:intergenic |
| TCTAAAGAAATGAGGAGCCT+GGG | 0.578551 | 5_1:+61040292 | None:intergenic |
| CCTGAAGATACCACAAATGT+TGG | 0.579526 | 5_1:+61040491 | None:intergenic |
| GATGGAAGGTGGGCGTCGTG+GGG | 0.580404 | 5_1:+61041066 | None:intergenic |
| AGAAGTGACTGTCGAAAACA+AGG | 0.582200 | 5_1:+61041091 | None:intergenic |
| GGAAGCCAATGCTCTTGCAT+TGG | 0.585364 | 5_1:+61041897 | None:intergenic |
| ACAAAGGTTTCCAGAGTCGA+AGG | 0.585762 | 5_1:-61040468 | Msa0741360:CDS |
| GGTGGAGGTAGATCAGAGAC+GGG | 0.587879 | 5_1:+61041016 | None:intergenic |
| AGCAACGACTTCACCAGCAA+AGG | 0.588840 | 5_1:+61041728 | None:intergenic |
| TAAAGTGAAGGATGGATGGA+AGG | 0.590822 | 5_1:+61041052 | None:intergenic |
| TTGTGGTATCTTCAGGACAA+AGG | 0.593564 | 5_1:-61040484 | Msa0741360:CDS |
| ACATGTCATAAAGTGAAGGA+TGG | 0.594714 | 5_1:+61041044 | None:intergenic |
| ATGCCAAGCCCTAAAAGGAA+TGG | 0.595010 | 5_1:-61040368 | Msa0741360:CDS |
| TGGTGGAGGTAGATCAGAGA+CGG | 0.600538 | 5_1:+61041015 | None:intergenic |
| CTCTACATGCACCTTCCTAA+GGG | 0.601014 | 5_1:-61040335 | Msa0741360:CDS |
| AGTGCAAGTGTCCCTTAGGA+AGG | 0.602305 | 5_1:+61040324 | None:intergenic |
| AACACTAATATTAATTGAGG+AGG | 0.603374 | 5_1:+61040252 | None:intergenic |
| TTGTGGTTGACGGAAGAAAG+AGG | 0.605169 | 5_1:-61040772 | Msa0741360:CDS |
| GAGTTACTTTGCAACAATCG+TGG | 0.605999 | 5_1:-61041687 | Msa0741360:CDS |
| GTCCAGTTCCTGGATTGGCA+AGG | 0.607030 | 5_1:-61040547 | Msa0741360:CDS |
| TTGTTCTTGTGCAGACAACA+TGG | 0.607336 | 5_1:-61041252 | Msa0741360:intron |
| AATGTGCTTTCGATTCCCTA+TGG | 0.610089 | 5_1:-61040698 | Msa0741360:CDS |
| GAGACTGGTCTAAAGAAATG+AGG | 0.612013 | 5_1:+61040284 | None:intergenic |
| AGAACACACCGACATCAACA+GGG | 0.612828 | 5_1:+61041847 | None:intergenic |
| AAGTAACTCAGGTTCACCCA+TGG | 0.618644 | 5_1:+61041701 | None:intergenic |
| GTGCTTTCGATTCCCTATGG+TGG | 0.619185 | 5_1:-61040695 | Msa0741360:CDS |
| AAAATGGGGCTTGTGGTTGA+CGG | 0.619932 | 5_1:-61040782 | Msa0741360:CDS |
| CTTGTTCCAAAGAAGAAACA+TGG | 0.620389 | 5_1:-61041582 | Msa0741360:CDS |
| TGGCACCCACCATAGCATTG+TGG | 0.626128 | 5_1:-61041796 | Msa0741360:CDS |
| ACATCCCACAATGCTATGGT+GGG | 0.631579 | 5_1:+61041791 | None:intergenic |
| ACATACATGTCATAAAGTGA+AGG | 0.639724 | 5_1:+61041040 | None:intergenic |
| ACTTTGCAACAATCGTGGAG+TGG | 0.644603 | 5_1:-61041682 | Msa0741360:CDS |
| GAAGTCGTTGCTAATTCCAT+GGG | 0.644829 | 5_1:-61041717 | Msa0741360:CDS |
| GAACACACCGACATCAACAG+GGG | 0.646980 | 5_1:+61041848 | None:intergenic |
| GGATTGGCAAGGATTTATTG+TGG | 0.648587 | 5_1:-61040536 | Msa0741360:CDS |
| GAGTCAAATTCAGGTTCAGG+TGG | 0.648966 | 5_1:+61040995 | None:intergenic |
| AAATGATAAGATCCAAACAC+AGG | 0.657847 | 5_1:+61040425 | None:intergenic |
| TGATAATCCGCTATGTTGGG+TGG | 0.663374 | 5_1:-61040651 | Msa0741360:CDS |
| ACAACATGGATGAAATGTGG+TGG | 0.668180 | 5_1:-61041238 | Msa0741360:CDS |
| AATAGGCATCCGCTATACGA+TGG | 0.674136 | 5_1:+61041191 | None:intergenic |
| GAAATGTGGTGGATTAGTGG+TGG | 0.677628 | 5_1:-61041227 | Msa0741360:CDS |
| AACACACCGACATCAACAGG+GGG | 0.687180 | 5_1:+61041849 | None:intergenic |
| CAGACAACATGGATGAAATG+TGG | 0.692012 | 5_1:-61041241 | Msa0741360:CDS |
| CTAGCCAACTCAAACAATGG+TGG | 0.694488 | 5_1:-61040899 | Msa0741360:CDS |
| TAGCCAGCACTACCTCCCCA+AGG | 0.698597 | 5_1:+61040401 | None:intergenic |
| GGGACACTTGCACTTCATGG+AGG | 0.714604 | 5_1:-61040315 | Msa0741360:CDS |
| CGATCTGCCACCCAACATAG+CGG | 0.715687 | 5_1:+61040644 | None:intergenic |
| GGAAGAAAGAGGCTAAGCAA+CGG | 0.723389 | 5_1:-61040761 | Msa0741360:CDS |
| CAACGTGAATATGACCAACG+AGG | 0.763069 | 5_1:-61041940 | Msa0741360:CDS |
| GTGGAGGTAGATCAGAGACG+GGG | 0.788848 | 5_1:+61041017 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAAAAATTCTTTAGCTA+AGG | - | chr5_1:61040456-61040475 | Msa0741360:CDS | 20.0% |
| !!! | AATTTTAATTTTGAACCACT+TGG | - | chr5_1:61040882-61040901 | Msa0741360:CDS | 20.0% |
| !!! | ATCAAAAACTTGTTATCATT+GGG | + | chr5_1:61041101-61041120 | None:intergenic | 20.0% |
| !!! | CGATTATGAATTCATATTTT+GGG | - | chr5_1:61041504-61041523 | Msa0741360:intron | 20.0% |
| !! | TTTGAAAAATTCTTTAGCTA+AGG | - | chr5_1:61040456-61040475 | Msa0741360:CDS | 20.0% |
| !!! | AATTTTAATTTTGAACCACT+TGG | - | chr5_1:61040882-61040901 | Msa0741360:CDS | 20.0% |
| !!! | ATCAAAAACTTGTTATCATT+GGG | + | chr5_1:61041101-61041120 | None:intergenic | 20.0% |
| !!! | CGATTATGAATTCATATTTT+GGG | - | chr5_1:61041504-61041523 | Msa0741360:intron | 20.0% |
| ! | ATTAAATCAAGGTTTGATAG+TGG | + | chr5_1:61040352-61040371 | None:intergenic | 25.0% |
| ! | AATAAGCCTATAATTACTAC+TGG | - | chr5_1:61040409-61040428 | Msa0741360:CDS | 25.0% |
| ! | AGTAAAATGATAAGACCAAT+GGG | + | chr5_1:61040823-61040842 | None:intergenic | 25.0% |
| ! | TATAATCTATACCATATGCA+AGG | + | chr5_1:61040936-61040955 | None:intergenic | 25.0% |
| !!! | GATCAAAAACTTGTTATCAT+TGG | + | chr5_1:61041102-61041121 | None:intergenic | 25.0% |
| ! | TTAATATCAGAGTCAAATTC+AGG | + | chr5_1:61041242-61041261 | None:intergenic | 25.0% |
| ! | AGTATATGCGACTTATTATT+GGG | + | chr5_1:61041271-61041290 | None:intergenic | 25.0% |
| ! | TAGTATATGCGACTTATTAT+TGG | + | chr5_1:61041272-61041291 | None:intergenic | 25.0% |
| ! | TGAAAACATTGTTGCAAAAA+TGG | - | chr5_1:61041427-61041446 | Msa0741360:intron | 25.0% |
| ! | GAAAACATTGTTGCAAAAAT+GGG | - | chr5_1:61041428-61041447 | Msa0741360:intron | 25.0% |
| ! | AAAACATTGTTGCAAAAATG+GGG | - | chr5_1:61041429-61041448 | Msa0741360:intron | 25.0% |
| !! | GCGATTATGAATTCATATTT+TGG | - | chr5_1:61041503-61041522 | Msa0741360:intron | 25.0% |
| ! | ATTTCTTGGGTTTAATAGAT+TGG | - | chr5_1:61041642-61041661 | Msa0741360:CDS | 25.0% |
| ! | TTTCTTGGGTTTAATAGATT+GGG | - | chr5_1:61041643-61041662 | Msa0741360:CDS | 25.0% |
| ! | ATTAAATCAAGGTTTGATAG+TGG | + | chr5_1:61040352-61040371 | None:intergenic | 25.0% |
| ! | AATAAGCCTATAATTACTAC+TGG | - | chr5_1:61040409-61040428 | Msa0741360:CDS | 25.0% |
| ! | AGTAAAATGATAAGACCAAT+GGG | + | chr5_1:61040823-61040842 | None:intergenic | 25.0% |
| ! | TATAATCTATACCATATGCA+AGG | + | chr5_1:61040936-61040955 | None:intergenic | 25.0% |
| !!! | GATCAAAAACTTGTTATCAT+TGG | + | chr5_1:61041102-61041121 | None:intergenic | 25.0% |
| ! | TTAATATCAGAGTCAAATTC+AGG | + | chr5_1:61041242-61041261 | None:intergenic | 25.0% |
| ! | AGTATATGCGACTTATTATT+GGG | + | chr5_1:61041271-61041290 | None:intergenic | 25.0% |
| ! | TAGTATATGCGACTTATTAT+TGG | + | chr5_1:61041272-61041291 | None:intergenic | 25.0% |
| ! | TGAAAACATTGTTGCAAAAA+TGG | - | chr5_1:61041427-61041446 | Msa0741360:intron | 25.0% |
| ! | GAAAACATTGTTGCAAAAAT+GGG | - | chr5_1:61041428-61041447 | Msa0741360:intron | 25.0% |
| ! | AAAACATTGTTGCAAAAATG+GGG | - | chr5_1:61041429-61041448 | Msa0741360:intron | 25.0% |
| !! | GCGATTATGAATTCATATTT+TGG | - | chr5_1:61041503-61041522 | Msa0741360:intron | 25.0% |
| ! | ATTTCTTGGGTTTAATAGAT+TGG | - | chr5_1:61041642-61041661 | Msa0741360:CDS | 25.0% |
| ! | TTTCTTGGGTTTAATAGATT+GGG | - | chr5_1:61041643-61041662 | Msa0741360:CDS | 25.0% |
| ! | ACCAAAACATTTTGTTCTCA+AGG | - | chr5_1:61040704-61040723 | Msa0741360:CDS | 30.0% |
| ! | CCAAAACATTTTGTTCTCAA+GGG | - | chr5_1:61040705-61040724 | Msa0741360:CDS | 30.0% |
| ATTAGTACTTGTGTTTAGAC+AGG | - | chr5_1:61040788-61040807 | Msa0741360:CDS | 30.0% | |
| CAGTAAAATGATAAGACCAA+TGG | + | chr5_1:61040824-61040843 | None:intergenic | 30.0% | |
| ! | TTAATTTTGAACCACTTGGT+TGG | - | chr5_1:61040886-61040905 | Msa0741360:CDS | 30.0% |
| AAACATGTTCCTTGTATCAT+GGG | - | chr5_1:61041061-61041080 | Msa0741360:CDS | 30.0% | |
| ACATACATGTCATAAAGTGA+AGG | + | chr5_1:61041188-61041207 | None:intergenic | 30.0% | |
| !! | GTTTTCATTATCGATTGAAG+CGG | + | chr5_1:61041414-61041433 | None:intergenic | 30.0% |
| TTTGTTAATCTACCACCATA+GGG | + | chr5_1:61041545-61041564 | None:intergenic | 30.0% | |
| ! | TTTTGTTAATCTACCACCAT+AGG | + | chr5_1:61041546-61041565 | None:intergenic | 30.0% |
| AAATGATAAGATCCAAACAC+AGG | + | chr5_1:61041803-61041822 | None:intergenic | 30.0% | |
| ! | TTGGATCTTATCATTTTCCT+TGG | - | chr5_1:61041807-61041826 | Msa0741360:CDS | 30.0% |
| ! | TGGATCTTATCATTTTCCTT+GGG | - | chr5_1:61041808-61041827 | Msa0741360:CDS | 30.0% |
| ! | ACCAAAACATTTTGTTCTCA+AGG | - | chr5_1:61040704-61040723 | Msa0741360:CDS | 30.0% |
| ! | CCAAAACATTTTGTTCTCAA+GGG | - | chr5_1:61040705-61040724 | Msa0741360:CDS | 30.0% |
| ATTAGTACTTGTGTTTAGAC+AGG | - | chr5_1:61040788-61040807 | Msa0741360:CDS | 30.0% | |
| CAGTAAAATGATAAGACCAA+TGG | + | chr5_1:61040824-61040843 | None:intergenic | 30.0% | |
| ! | TTAATTTTGAACCACTTGGT+TGG | - | chr5_1:61040886-61040905 | Msa0741360:CDS | 30.0% |
| AAACATGTTCCTTGTATCAT+GGG | - | chr5_1:61041061-61041080 | Msa0741360:CDS | 30.0% | |
| ACATACATGTCATAAAGTGA+AGG | + | chr5_1:61041188-61041207 | None:intergenic | 30.0% | |
| !! | GTTTTCATTATCGATTGAAG+CGG | + | chr5_1:61041414-61041433 | None:intergenic | 30.0% |
| TTTGTTAATCTACCACCATA+GGG | + | chr5_1:61041545-61041564 | None:intergenic | 30.0% | |
| ! | TTTTGTTAATCTACCACCAT+AGG | + | chr5_1:61041546-61041565 | None:intergenic | 30.0% |
| AAATGATAAGATCCAAACAC+AGG | + | chr5_1:61041803-61041822 | None:intergenic | 30.0% | |
| ! | TTGGATCTTATCATTTTCCT+TGG | - | chr5_1:61041807-61041826 | Msa0741360:CDS | 30.0% |
| ! | TGGATCTTATCATTTTCCTT+GGG | - | chr5_1:61041808-61041827 | Msa0741360:CDS | 30.0% |
| GTTTCTTATTATGCCTTTGC+TGG | - | chr5_1:61040484-61040503 | Msa0741360:CDS | 35.0% | |
| AATCCAGATGAAACTGTAGA+AGG | - | chr5_1:61040616-61040635 | Msa0741360:CDS | 35.0% | |
| ATCCAGATGAAACTGTAGAA+GGG | - | chr5_1:61040617-61040636 | Msa0741360:CDS | 35.0% | |
| CTTGTTCCAAAGAAGAAACA+TGG | - | chr5_1:61040643-61040662 | Msa0741360:CDS | 35.0% | |
| ! | CCCTTGAGAACAAAATGTTT+TGG | + | chr5_1:61040708-61040727 | None:intergenic | 35.0% |
| TCTCAAGGGAATATTCGAAT+AGG | - | chr5_1:61040719-61040738 | Msa0741360:CDS | 35.0% | |
| AATGATAAGACCAATGGGTA+CGG | + | chr5_1:61040818-61040837 | None:intergenic | 35.0% | |
| !!! | TTGGTTTAGTGGTGTTGTTT+TGG | - | chr5_1:61040905-61040924 | Msa0741360:CDS | 35.0% |
| !!! | TGGTTTAGTGGTGTTGTTTT+GGG | - | chr5_1:61040906-61040925 | Msa0741360:CDS | 35.0% |
| AATCTATACCATATGCAAGG+TGG | + | chr5_1:61040933-61040952 | None:intergenic | 35.0% | |
| AAGGAACATGTTTGCAGAAT+AGG | + | chr5_1:61041054-61041073 | None:intergenic | 35.0% | |
| CAAACATGTTCCTTGTATCA+TGG | - | chr5_1:61041060-61041079 | Msa0741360:CDS | 35.0% | |
| ACATGTCATAAAGTGAAGGA+TGG | + | chr5_1:61041184-61041203 | None:intergenic | 35.0% | |
| TTTCCACAAGAAAGCAGAAA+AGG | + | chr5_1:61041378-61041397 | None:intergenic | 35.0% | |
| TTCTGCTTTCTTGTGGAAAA+TGG | - | chr5_1:61041379-61041398 | Msa0741360:intron | 35.0% | |
| TTTCTTGTGGAAAATGGTTG+CGG | - | chr5_1:61041385-61041404 | Msa0741360:intron | 35.0% | |
| TGGTAGATTAACAAAAGAGC+TGG | - | chr5_1:61041550-61041569 | Msa0741360:intron | 35.0% | |
| ! | AGATCGAGTTCATGAGTTTT+TGG | - | chr5_1:61041598-61041617 | Msa0741360:CDS | 35.0% |
| AGGATTTATTGTGGTAGTAC+TGG | - | chr5_1:61041698-61041717 | Msa0741360:CDS | 35.0% | |
| ! | ATTTATTGTGGTAGTACTGG+TGG | - | chr5_1:61041701-61041720 | Msa0741360:CDS | 35.0% |
| ! | GGATCTTATCATTTTCCTTG+GGG | - | chr5_1:61041809-61041828 | Msa0741360:CDS | 35.0% |
| ATTTCTTTAGACCAGTCTCT+TGG | - | chr5_1:61041945-61041964 | Msa0741360:CDS | 35.0% | |
| TTTCTTTAGACCAGTCTCTT+GGG | - | chr5_1:61041946-61041965 | Msa0741360:CDS | 35.0% | |
| GTTTCTTATTATGCCTTTGC+TGG | - | chr5_1:61040484-61040503 | Msa0741360:CDS | 35.0% | |
| AATCCAGATGAAACTGTAGA+AGG | - | chr5_1:61040616-61040635 | Msa0741360:CDS | 35.0% | |
| ATCCAGATGAAACTGTAGAA+GGG | - | chr5_1:61040617-61040636 | Msa0741360:CDS | 35.0% | |
| CTTGTTCCAAAGAAGAAACA+TGG | - | chr5_1:61040643-61040662 | Msa0741360:CDS | 35.0% | |
| ! | CCCTTGAGAACAAAATGTTT+TGG | + | chr5_1:61040708-61040727 | None:intergenic | 35.0% |
| TCTCAAGGGAATATTCGAAT+AGG | - | chr5_1:61040719-61040738 | Msa0741360:CDS | 35.0% | |
| AATGATAAGACCAATGGGTA+CGG | + | chr5_1:61040818-61040837 | None:intergenic | 35.0% | |
| !!! | TTGGTTTAGTGGTGTTGTTT+TGG | - | chr5_1:61040905-61040924 | Msa0741360:CDS | 35.0% |
| !!! | TGGTTTAGTGGTGTTGTTTT+GGG | - | chr5_1:61040906-61040925 | Msa0741360:CDS | 35.0% |
| AATCTATACCATATGCAAGG+TGG | + | chr5_1:61040933-61040952 | None:intergenic | 35.0% | |
| AAGGAACATGTTTGCAGAAT+AGG | + | chr5_1:61041054-61041073 | None:intergenic | 35.0% | |
| CAAACATGTTCCTTGTATCA+TGG | - | chr5_1:61041060-61041079 | Msa0741360:CDS | 35.0% | |
| ACATGTCATAAAGTGAAGGA+TGG | + | chr5_1:61041184-61041203 | None:intergenic | 35.0% | |
| TTTCCACAAGAAAGCAGAAA+AGG | + | chr5_1:61041378-61041397 | None:intergenic | 35.0% | |
| TTCTGCTTTCTTGTGGAAAA+TGG | - | chr5_1:61041379-61041398 | Msa0741360:intron | 35.0% | |
| TTTCTTGTGGAAAATGGTTG+CGG | - | chr5_1:61041385-61041404 | Msa0741360:intron | 35.0% | |
| TGGTAGATTAACAAAAGAGC+TGG | - | chr5_1:61041550-61041569 | Msa0741360:intron | 35.0% | |
| ! | AGATCGAGTTCATGAGTTTT+TGG | - | chr5_1:61041598-61041617 | Msa0741360:CDS | 35.0% |
| AGGATTTATTGTGGTAGTAC+TGG | - | chr5_1:61041698-61041717 | Msa0741360:CDS | 35.0% | |
| ! | ATTTATTGTGGTAGTACTGG+TGG | - | chr5_1:61041701-61041720 | Msa0741360:CDS | 35.0% |
| ! | GGATCTTATCATTTTCCTTG+GGG | - | chr5_1:61041809-61041828 | Msa0741360:CDS | 35.0% |
| ATTTCTTTAGACCAGTCTCT+TGG | - | chr5_1:61041945-61041964 | Msa0741360:CDS | 35.0% | |
| TTTCTTTAGACCAGTCTCTT+GGG | - | chr5_1:61041946-61041965 | Msa0741360:CDS | 35.0% | |
| TATGACCAACGAGGAAATAG+TGG | - | chr5_1:61040294-61040313 | Msa0741360:CDS | 40.0% | |
| CAGGGGGAAGAATTAAATCA+AGG | + | chr5_1:61040363-61040382 | None:intergenic | 40.0% | |
| TGGGTGCCAGTAGTAATTAT+AGG | + | chr5_1:61040418-61040437 | None:intergenic | 40.0% | |
| TCAAACATCCCACAATGCTA+TGG | + | chr5_1:61040441-61040460 | None:intergenic | 40.0% | |
| TGAAGTCGTTGCTAATTCCA+TGG | - | chr5_1:61040507-61040526 | Msa0741360:CDS | 40.0% | |
| GAAGTCGTTGCTAATTCCAT+GGG | - | chr5_1:61040508-61040527 | Msa0741360:CDS | 40.0% | |
| CGATTGTTGCAAAGTAACTC+AGG | + | chr5_1:61040538-61040557 | None:intergenic | 40.0% | |
| ! | GAGTTACTTTGCAACAATCG+TGG | - | chr5_1:61040538-61040557 | Msa0741360:CDS | 40.0% |
| TTCCCTTCTACAGTTTCATC+TGG | + | chr5_1:61040622-61040641 | None:intergenic | 40.0% | |
| AGCACACCATGTTTCTTCTT+TGG | + | chr5_1:61040652-61040671 | None:intergenic | 40.0% | |
| TTGTTCTTGTGCAGACAACA+TGG | - | chr5_1:61040973-61040992 | Msa0741360:CDS | 40.0% | |
| CAGACAACATGGATGAAATG+TGG | - | chr5_1:61040984-61041003 | Msa0741360:CDS | 40.0% | |
| ACAACATGGATGAAATGTGG+TGG | - | chr5_1:61040987-61041006 | Msa0741360:CDS | 40.0% | |
| !! | GATGAAATGTGGTGGATTAG+TGG | - | chr5_1:61040995-61041014 | Msa0741360:CDS | 40.0% |
| ! | CACTTTTGACCATCGTATAG+CGG | - | chr5_1:61041025-61041044 | Msa0741360:CDS | 40.0% |
| GAAAACAAGGTTGCGTTGTT+GGG | + | chr5_1:61041124-61041143 | None:intergenic | 40.0% | |
| AGAAGTGACTGTCGAAAACA+AGG | + | chr5_1:61041137-61041156 | None:intergenic | 40.0% | |
| TAAAGTGAAGGATGGATGGA+AGG | + | chr5_1:61041176-61041195 | None:intergenic | 40.0% | |
| GTCATAAAGTGAAGGATGGA+TGG | + | chr5_1:61041180-61041199 | None:intergenic | 40.0% | |
| ! | TCAGAGTCAAATTCAGGTTC+AGG | + | chr5_1:61041236-61041255 | None:intergenic | 40.0% |
| TCACTAGCCAACTCAAACAA+TGG | - | chr5_1:61041323-61041342 | Msa0741360:intron | 40.0% | |
| ACTACCACCATTGTTTGAGT+TGG | + | chr5_1:61041333-61041352 | None:intergenic | 40.0% | |
| ! | AGTCCTTTTCTGCTTTCTTG+TGG | - | chr5_1:61041372-61041391 | Msa0741360:intron | 40.0% |
| AATGTGCTTTCGATTCCCTA+TGG | - | chr5_1:61041527-61041546 | Msa0741360:intron | 40.0% | |
| !! | TGGTTGATAATCCGCTATGT+TGG | - | chr5_1:61041570-61041589 | Msa0741360:CDS | 40.0% |
| !! | GGTTGATAATCCGCTATGTT+GGG | - | chr5_1:61041571-61041590 | Msa0741360:CDS | 40.0% |
| !! | TCGAGTTCATGAGTTTTTGG+AGG | - | chr5_1:61041601-61041620 | Msa0741360:CDS | 40.0% |
| !! | AGTTCATGAGTTTTTGGAGG+CGG | - | chr5_1:61041604-61041623 | Msa0741360:CDS | 40.0% |
| CTTGGGTTTAATAGATTGGG+TGG | - | chr5_1:61041646-61041665 | Msa0741360:CDS | 40.0% | |
| CAATAAATCCTTGCCAATCC+AGG | + | chr5_1:61041689-61041708 | None:intergenic | 40.0% | |
| ! | GGATTGGCAAGGATTTATTG+TGG | - | chr5_1:61041689-61041708 | Msa0741360:CDS | 40.0% |
| AGAAGAAGGACCAACATTTG+TGG | - | chr5_1:61041724-61041743 | Msa0741360:CDS | 40.0% | |
| CCTGAAGATACCACAAATGT+TGG | + | chr5_1:61041737-61041756 | None:intergenic | 40.0% | |
| CCAACATTTGTGGTATCTTC+AGG | - | chr5_1:61041734-61041753 | Msa0741360:CDS | 40.0% | |
| TTGTGGTATCTTCAGGACAA+AGG | - | chr5_1:61041741-61041760 | Msa0741360:CDS | 40.0% | |
| !! | AGTCGAAGGTTGATTTTGGA+TGG | - | chr5_1:61041771-61041790 | Msa0741360:CDS | 40.0% |
| !! | GTCGAAGGTTGATTTTGGAT+GGG | - | chr5_1:61041772-61041791 | Msa0741360:CDS | 40.0% |
| !! | TCGAAGGTTGATTTTGGATG+GGG | - | chr5_1:61041773-61041792 | Msa0741360:CDS | 40.0% |
| ! | TCTTATCATTTTCCTTGGGG+AGG | - | chr5_1:61041812-61041831 | Msa0741360:CDS | 40.0% |
| ! | ACCAGTCACCATTCCTTTTA+GGG | + | chr5_1:61041868-61041887 | None:intergenic | 40.0% |
| ! | AACCAGTCACCATTCCTTTT+AGG | + | chr5_1:61041869-61041888 | None:intergenic | 40.0% |
| TCTAAAGAAATGAGGAGCCT+GGG | + | chr5_1:61041936-61041955 | None:intergenic | 40.0% | |
| !! | GAGACTGGTCTAAAGAAATG+AGG | + | chr5_1:61041944-61041963 | None:intergenic | 40.0% |
| TATGACCAACGAGGAAATAG+TGG | - | chr5_1:61040294-61040313 | Msa0741360:CDS | 40.0% | |
| CAGGGGGAAGAATTAAATCA+AGG | + | chr5_1:61040363-61040382 | None:intergenic | 40.0% | |
| TGGGTGCCAGTAGTAATTAT+AGG | + | chr5_1:61040418-61040437 | None:intergenic | 40.0% | |
| TCAAACATCCCACAATGCTA+TGG | + | chr5_1:61040441-61040460 | None:intergenic | 40.0% | |
| TGAAGTCGTTGCTAATTCCA+TGG | - | chr5_1:61040507-61040526 | Msa0741360:CDS | 40.0% | |
| GAAGTCGTTGCTAATTCCAT+GGG | - | chr5_1:61040508-61040527 | Msa0741360:CDS | 40.0% | |
| CGATTGTTGCAAAGTAACTC+AGG | + | chr5_1:61040538-61040557 | None:intergenic | 40.0% | |
| ! | GAGTTACTTTGCAACAATCG+TGG | - | chr5_1:61040538-61040557 | Msa0741360:CDS | 40.0% |
| TTCCCTTCTACAGTTTCATC+TGG | + | chr5_1:61040622-61040641 | None:intergenic | 40.0% | |
| AGCACACCATGTTTCTTCTT+TGG | + | chr5_1:61040652-61040671 | None:intergenic | 40.0% | |
| TTGTTCTTGTGCAGACAACA+TGG | - | chr5_1:61040973-61040992 | Msa0741360:CDS | 40.0% | |
| CAGACAACATGGATGAAATG+TGG | - | chr5_1:61040984-61041003 | Msa0741360:CDS | 40.0% | |
| ACAACATGGATGAAATGTGG+TGG | - | chr5_1:61040987-61041006 | Msa0741360:CDS | 40.0% | |
| !! | GATGAAATGTGGTGGATTAG+TGG | - | chr5_1:61040995-61041014 | Msa0741360:CDS | 40.0% |
| ! | CACTTTTGACCATCGTATAG+CGG | - | chr5_1:61041025-61041044 | Msa0741360:CDS | 40.0% |
| GAAAACAAGGTTGCGTTGTT+GGG | + | chr5_1:61041124-61041143 | None:intergenic | 40.0% | |
| AGAAGTGACTGTCGAAAACA+AGG | + | chr5_1:61041137-61041156 | None:intergenic | 40.0% | |
| TAAAGTGAAGGATGGATGGA+AGG | + | chr5_1:61041176-61041195 | None:intergenic | 40.0% | |
| GTCATAAAGTGAAGGATGGA+TGG | + | chr5_1:61041180-61041199 | None:intergenic | 40.0% | |
| ! | TCAGAGTCAAATTCAGGTTC+AGG | + | chr5_1:61041236-61041255 | None:intergenic | 40.0% |
| TCACTAGCCAACTCAAACAA+TGG | - | chr5_1:61041323-61041342 | Msa0741360:intron | 40.0% | |
| ACTACCACCATTGTTTGAGT+TGG | + | chr5_1:61041333-61041352 | None:intergenic | 40.0% | |
| ! | AGTCCTTTTCTGCTTTCTTG+TGG | - | chr5_1:61041372-61041391 | Msa0741360:intron | 40.0% |
| AATGTGCTTTCGATTCCCTA+TGG | - | chr5_1:61041527-61041546 | Msa0741360:intron | 40.0% | |
| !! | TGGTTGATAATCCGCTATGT+TGG | - | chr5_1:61041570-61041589 | Msa0741360:CDS | 40.0% |
| !! | GGTTGATAATCCGCTATGTT+GGG | - | chr5_1:61041571-61041590 | Msa0741360:CDS | 40.0% |
| !! | TCGAGTTCATGAGTTTTTGG+AGG | - | chr5_1:61041601-61041620 | Msa0741360:CDS | 40.0% |
| !! | AGTTCATGAGTTTTTGGAGG+CGG | - | chr5_1:61041604-61041623 | Msa0741360:CDS | 40.0% |
| CTTGGGTTTAATAGATTGGG+TGG | - | chr5_1:61041646-61041665 | Msa0741360:CDS | 40.0% | |
| CAATAAATCCTTGCCAATCC+AGG | + | chr5_1:61041689-61041708 | None:intergenic | 40.0% | |
| ! | GGATTGGCAAGGATTTATTG+TGG | - | chr5_1:61041689-61041708 | Msa0741360:CDS | 40.0% |
| AGAAGAAGGACCAACATTTG+TGG | - | chr5_1:61041724-61041743 | Msa0741360:CDS | 40.0% | |
| CCTGAAGATACCACAAATGT+TGG | + | chr5_1:61041737-61041756 | None:intergenic | 40.0% | |
| CCAACATTTGTGGTATCTTC+AGG | - | chr5_1:61041734-61041753 | Msa0741360:CDS | 40.0% | |
| TTGTGGTATCTTCAGGACAA+AGG | - | chr5_1:61041741-61041760 | Msa0741360:CDS | 40.0% | |
| !! | AGTCGAAGGTTGATTTTGGA+TGG | - | chr5_1:61041771-61041790 | Msa0741360:CDS | 40.0% |
| !! | GTCGAAGGTTGATTTTGGAT+GGG | - | chr5_1:61041772-61041791 | Msa0741360:CDS | 40.0% |
| !! | TCGAAGGTTGATTTTGGATG+GGG | - | chr5_1:61041773-61041792 | Msa0741360:CDS | 40.0% |
| ! | TCTTATCATTTTCCTTGGGG+AGG | - | chr5_1:61041812-61041831 | Msa0741360:CDS | 40.0% |
| ! | ACCAGTCACCATTCCTTTTA+GGG | + | chr5_1:61041868-61041887 | None:intergenic | 40.0% |
| ! | AACCAGTCACCATTCCTTTT+AGG | + | chr5_1:61041869-61041888 | None:intergenic | 40.0% |
| TCTAAAGAAATGAGGAGCCT+GGG | + | chr5_1:61041936-61041955 | None:intergenic | 40.0% | |
| !! | GAGACTGGTCTAAAGAAATG+AGG | + | chr5_1:61041944-61041963 | None:intergenic | 40.0% |
| CAACGTGAATATGACCAACG+AGG | - | chr5_1:61040285-61040304 | Msa0741360:CDS | 45.0% | |
| ATTCTTCCCCCTGTTGATGT+CGG | - | chr5_1:61040370-61040389 | Msa0741360:CDS | 45.0% | |
| AGAACACACCGACATCAACA+GGG | + | chr5_1:61040381-61040400 | None:intergenic | 45.0% | |
| AAGAACACACCGACATCAAC+AGG | + | chr5_1:61040382-61040401 | None:intergenic | 45.0% | |
| ACATCCCACAATGCTATGGT+GGG | + | chr5_1:61040437-61040456 | None:intergenic | 45.0% | |
| AACATCCCACAATGCTATGG+TGG | + | chr5_1:61040438-61040457 | None:intergenic | 45.0% | |
| AAGTAACTCAGGTTCACCCA+TGG | + | chr5_1:61040527-61040546 | None:intergenic | 45.0% | |
| ACTTTGCAACAATCGTGGAG+TGG | - | chr5_1:61040543-61040562 | Msa0741360:CDS | 45.0% | |
| !! | GAACCACTTGGTTGGTTTAG+TGG | - | chr5_1:61040894-61040913 | Msa0741360:CDS | 45.0% |
| ACACCACTAAACCAACCAAG+TGG | + | chr5_1:61040900-61040919 | None:intergenic | 45.0% | |
| !!! | TTTTGGGACCACCTTGCATA+TGG | - | chr5_1:61040922-61040941 | Msa0741360:CDS | 45.0% |
| !! | GAAATGTGGTGGATTAGTGG+TGG | - | chr5_1:61040998-61041017 | Msa0741360:CDS | 45.0% |
| AATAGGCATCCGCTATACGA+TGG | + | chr5_1:61041037-61041056 | None:intergenic | 45.0% | |
| ATCATTGGGCTGAGCCATTT+CGG | + | chr5_1:61041087-61041106 | None:intergenic | 45.0% | |
| CGAAAACAAGGTTGCGTTGT+TGG | + | chr5_1:61041125-61041144 | None:intergenic | 45.0% | |
| ! | TCAAATTCAGGTTCAGGTGG+TGG | + | chr5_1:61041230-61041249 | None:intergenic | 45.0% |
| ! | GAGTCAAATTCAGGTTCAGG+TGG | + | chr5_1:61041233-61041252 | None:intergenic | 45.0% |
| CTAGCCAACTCAAACAATGG+TGG | - | chr5_1:61041326-61041345 | Msa0741360:intron | 45.0% | |
| TGTTGCAAAAATGGGGCTTG+TGG | - | chr5_1:61041436-61041455 | Msa0741360:intron | 45.0% | |
| AAAATGGGGCTTGTGGTTGA+CGG | - | chr5_1:61041443-61041462 | Msa0741360:intron | 45.0% | |
| TTGTGGTTGACGGAAGAAAG+AGG | - | chr5_1:61041453-61041472 | Msa0741360:intron | 45.0% | |
| GGAAGAAAGAGGCTAAGCAA+CGG | - | chr5_1:61041464-61041483 | Msa0741360:intron | 45.0% | |
| TGATAATCCGCTATGTTGGG+TGG | - | chr5_1:61041574-61041593 | Msa0741360:CDS | 45.0% | |
| !! | GTGACAGAGGAGCATTTCTT+GGG | - | chr5_1:61041629-61041648 | Msa0741360:CDS | 45.0% |
| ACAAAGGTTTCCAGAGTCGA+AGG | - | chr5_1:61041757-61041776 | Msa0741360:CDS | 45.0% | |
| CCAAAATCAACCTTCGACTC+TGG | + | chr5_1:61041770-61041789 | None:intergenic | 45.0% | |
| !! | CCAGAGTCGAAGGTTGATTT+TGG | - | chr5_1:61041767-61041786 | Msa0741360:CDS | 45.0% |
| !! | CGAAGGTTGATTTTGGATGG+GGG | - | chr5_1:61041774-61041793 | Msa0741360:CDS | 45.0% |
| !!! | TTCCTTTTAGGGCTTGGCAT+TGG | + | chr5_1:61041857-61041876 | None:intergenic | 45.0% |
| ATGCCAAGCCCTAAAAGGAA+TGG | - | chr5_1:61041857-61041876 | Msa0741360:CDS | 45.0% | |
| !!! | TCACCATTCCTTTTAGGGCT+TGG | + | chr5_1:61041863-61041882 | None:intergenic | 45.0% |
| CTCTACATGCACCTTCCTAA+GGG | - | chr5_1:61041890-61041909 | Msa0741360:CDS | 45.0% | |
| ATGAAGTGCAAGTGTCCCTT+AGG | + | chr5_1:61041908-61041927 | None:intergenic | 45.0% | |
| TAAGGGACACTTGCACTTCA+TGG | - | chr5_1:61041907-61041926 | Msa0741360:CDS | 45.0% | |
| GTCTAAAGAAATGAGGAGCC+TGG | + | chr5_1:61041937-61041956 | None:intergenic | 45.0% | |
| CAACGTGAATATGACCAACG+AGG | - | chr5_1:61040285-61040304 | Msa0741360:CDS | 45.0% | |
| ATTCTTCCCCCTGTTGATGT+CGG | - | chr5_1:61040370-61040389 | Msa0741360:CDS | 45.0% | |
| AGAACACACCGACATCAACA+GGG | + | chr5_1:61040381-61040400 | None:intergenic | 45.0% | |
| AAGAACACACCGACATCAAC+AGG | + | chr5_1:61040382-61040401 | None:intergenic | 45.0% | |
| ACATCCCACAATGCTATGGT+GGG | + | chr5_1:61040437-61040456 | None:intergenic | 45.0% | |
| AACATCCCACAATGCTATGG+TGG | + | chr5_1:61040438-61040457 | None:intergenic | 45.0% | |
| AAGTAACTCAGGTTCACCCA+TGG | + | chr5_1:61040527-61040546 | None:intergenic | 45.0% | |
| ACTTTGCAACAATCGTGGAG+TGG | - | chr5_1:61040543-61040562 | Msa0741360:CDS | 45.0% | |
| !! | GAACCACTTGGTTGGTTTAG+TGG | - | chr5_1:61040894-61040913 | Msa0741360:CDS | 45.0% |
| ACACCACTAAACCAACCAAG+TGG | + | chr5_1:61040900-61040919 | None:intergenic | 45.0% | |
| !!! | TTTTGGGACCACCTTGCATA+TGG | - | chr5_1:61040922-61040941 | Msa0741360:CDS | 45.0% |
| !! | GAAATGTGGTGGATTAGTGG+TGG | - | chr5_1:61040998-61041017 | Msa0741360:CDS | 45.0% |
| AATAGGCATCCGCTATACGA+TGG | + | chr5_1:61041037-61041056 | None:intergenic | 45.0% | |
| ATCATTGGGCTGAGCCATTT+CGG | + | chr5_1:61041087-61041106 | None:intergenic | 45.0% | |
| CGAAAACAAGGTTGCGTTGT+TGG | + | chr5_1:61041125-61041144 | None:intergenic | 45.0% | |
| ! | TCAAATTCAGGTTCAGGTGG+TGG | + | chr5_1:61041230-61041249 | None:intergenic | 45.0% |
| ! | GAGTCAAATTCAGGTTCAGG+TGG | + | chr5_1:61041233-61041252 | None:intergenic | 45.0% |
| CTAGCCAACTCAAACAATGG+TGG | - | chr5_1:61041326-61041345 | Msa0741360:intron | 45.0% | |
| TGTTGCAAAAATGGGGCTTG+TGG | - | chr5_1:61041436-61041455 | Msa0741360:intron | 45.0% | |
| AAAATGGGGCTTGTGGTTGA+CGG | - | chr5_1:61041443-61041462 | Msa0741360:intron | 45.0% | |
| TTGTGGTTGACGGAAGAAAG+AGG | - | chr5_1:61041453-61041472 | Msa0741360:intron | 45.0% | |
| GGAAGAAAGAGGCTAAGCAA+CGG | - | chr5_1:61041464-61041483 | Msa0741360:intron | 45.0% | |
| TGATAATCCGCTATGTTGGG+TGG | - | chr5_1:61041574-61041593 | Msa0741360:CDS | 45.0% | |
| !! | GTGACAGAGGAGCATTTCTT+GGG | - | chr5_1:61041629-61041648 | Msa0741360:CDS | 45.0% |
| ACAAAGGTTTCCAGAGTCGA+AGG | - | chr5_1:61041757-61041776 | Msa0741360:CDS | 45.0% | |
| CCAAAATCAACCTTCGACTC+TGG | + | chr5_1:61041770-61041789 | None:intergenic | 45.0% | |
| !! | CCAGAGTCGAAGGTTGATTT+TGG | - | chr5_1:61041767-61041786 | Msa0741360:CDS | 45.0% |
| !! | CGAAGGTTGATTTTGGATGG+GGG | - | chr5_1:61041774-61041793 | Msa0741360:CDS | 45.0% |
| !!! | TTCCTTTTAGGGCTTGGCAT+TGG | + | chr5_1:61041857-61041876 | None:intergenic | 45.0% |
| ATGCCAAGCCCTAAAAGGAA+TGG | - | chr5_1:61041857-61041876 | Msa0741360:CDS | 45.0% | |
| !!! | TCACCATTCCTTTTAGGGCT+TGG | + | chr5_1:61041863-61041882 | None:intergenic | 45.0% |
| CTCTACATGCACCTTCCTAA+GGG | - | chr5_1:61041890-61041909 | Msa0741360:CDS | 45.0% | |
| ATGAAGTGCAAGTGTCCCTT+AGG | + | chr5_1:61041908-61041927 | None:intergenic | 45.0% | |
| TAAGGGACACTTGCACTTCA+TGG | - | chr5_1:61041907-61041926 | Msa0741360:CDS | 45.0% | |
| GTCTAAAGAAATGAGGAGCC+TGG | + | chr5_1:61041937-61041956 | None:intergenic | 45.0% | |
| AGCTGCCACTATTTCCTCGT+TGG | + | chr5_1:61040302-61040321 | None:intergenic | 50.0% | |
| ! | CGCTACCAATGCAAGAGCAT+TGG | - | chr5_1:61040323-61040342 | Msa0741360:CDS | 50.0% |
| GGAAGCCAATGCTCTTGCAT+TGG | + | chr5_1:61040331-61040350 | None:intergenic | 50.0% | |
| AACACACCGACATCAACAGG+GGG | + | chr5_1:61040379-61040398 | None:intergenic | 50.0% | |
| GAACACACCGACATCAACAG+GGG | + | chr5_1:61040380-61040399 | None:intergenic | 50.0% | |
| AGCAACGACTTCACCAGCAA+AGG | + | chr5_1:61040500-61040519 | None:intergenic | 50.0% | |
| !! | ACATGGTGTGCTTGCTGTTC+AGG | - | chr5_1:61040660-61040679 | Msa0741360:CDS | 50.0% |
| CCATTTCGGCCCATGATACA+AGG | + | chr5_1:61041073-61041092 | None:intergenic | 50.0% | |
| CCTTGTATCATGGGCCGAAA+TGG | - | chr5_1:61041070-61041089 | Msa0741360:CDS | 50.0% | |
| GTGAAGGATGGATGGAAGGT+GGG | + | chr5_1:61041172-61041191 | None:intergenic | 50.0% | |
| AGTGAAGGATGGATGGAAGG+TGG | + | chr5_1:61041173-61041192 | None:intergenic | 50.0% | |
| TGGTGGAGGTAGATCAGAGA+CGG | + | chr5_1:61041213-61041232 | None:intergenic | 50.0% | |
| ! | AATTCAGGTTCAGGTGGTGG+AGG | + | chr5_1:61041227-61041246 | None:intergenic | 50.0% |
| GTGCTTTCGATTCCCTATGG+TGG | - | chr5_1:61041530-61041549 | Msa0741360:intron | 50.0% | |
| !! | TCATGAGTTTTTGGAGGCGG+CGG | - | chr5_1:61041607-61041626 | Msa0741360:CDS | 50.0% |
| !! | GGTGACAGAGGAGCATTTCT+TGG | - | chr5_1:61041628-61041647 | Msa0741360:CDS | 50.0% |
| ATCCTTGCCAATCCAGGAAC+TGG | + | chr5_1:61041683-61041702 | None:intergenic | 50.0% | |
| !! | GGTAGTACTGGTGGAGAAGA+AGG | - | chr5_1:61041710-61041729 | Msa0741360:CDS | 50.0% |
| TGCCAATGCCAAGCCCTAAA+AGG | - | chr5_1:61041852-61041871 | Msa0741360:CDS | 50.0% | |
| GCCCTAAAAGGAATGGTGAC+TGG | - | chr5_1:61041864-61041883 | Msa0741360:CDS | 50.0% | |
| GCTCTACATGCACCTTCCTA+AGG | - | chr5_1:61041889-61041908 | Msa0741360:CDS | 50.0% | |
| AGTGCAAGTGTCCCTTAGGA+AGG | + | chr5_1:61041904-61041923 | None:intergenic | 50.0% | |
| AGGAGGTAATCCCAAGAGAC+TGG | + | chr5_1:61041959-61041978 | None:intergenic | 50.0% | |
| AGCTGCCACTATTTCCTCGT+TGG | + | chr5_1:61040302-61040321 | None:intergenic | 50.0% | |
| ! | CGCTACCAATGCAAGAGCAT+TGG | - | chr5_1:61040323-61040342 | Msa0741360:CDS | 50.0% |
| GGAAGCCAATGCTCTTGCAT+TGG | + | chr5_1:61040331-61040350 | None:intergenic | 50.0% | |
| AACACACCGACATCAACAGG+GGG | + | chr5_1:61040379-61040398 | None:intergenic | 50.0% | |
| GAACACACCGACATCAACAG+GGG | + | chr5_1:61040380-61040399 | None:intergenic | 50.0% | |
| AGCAACGACTTCACCAGCAA+AGG | + | chr5_1:61040500-61040519 | None:intergenic | 50.0% | |
| !! | ACATGGTGTGCTTGCTGTTC+AGG | - | chr5_1:61040660-61040679 | Msa0741360:CDS | 50.0% |
| CCATTTCGGCCCATGATACA+AGG | + | chr5_1:61041073-61041092 | None:intergenic | 50.0% | |
| CCTTGTATCATGGGCCGAAA+TGG | - | chr5_1:61041070-61041089 | Msa0741360:CDS | 50.0% | |
| GTGAAGGATGGATGGAAGGT+GGG | + | chr5_1:61041172-61041191 | None:intergenic | 50.0% | |
| AGTGAAGGATGGATGGAAGG+TGG | + | chr5_1:61041173-61041192 | None:intergenic | 50.0% | |
| TGGTGGAGGTAGATCAGAGA+CGG | + | chr5_1:61041213-61041232 | None:intergenic | 50.0% | |
| ! | AATTCAGGTTCAGGTGGTGG+AGG | + | chr5_1:61041227-61041246 | None:intergenic | 50.0% |
| GTGCTTTCGATTCCCTATGG+TGG | - | chr5_1:61041530-61041549 | Msa0741360:intron | 50.0% | |
| !! | TCATGAGTTTTTGGAGGCGG+CGG | - | chr5_1:61041607-61041626 | Msa0741360:CDS | 50.0% |
| !! | GGTGACAGAGGAGCATTTCT+TGG | - | chr5_1:61041628-61041647 | Msa0741360:CDS | 50.0% |
| ATCCTTGCCAATCCAGGAAC+TGG | + | chr5_1:61041683-61041702 | None:intergenic | 50.0% | |
| !! | GGTAGTACTGGTGGAGAAGA+AGG | - | chr5_1:61041710-61041729 | Msa0741360:CDS | 50.0% |
| TGCCAATGCCAAGCCCTAAA+AGG | - | chr5_1:61041852-61041871 | Msa0741360:CDS | 50.0% | |
| GCCCTAAAAGGAATGGTGAC+TGG | - | chr5_1:61041864-61041883 | Msa0741360:CDS | 50.0% | |
| GCTCTACATGCACCTTCCTA+AGG | - | chr5_1:61041889-61041908 | Msa0741360:CDS | 50.0% | |
| AGTGCAAGTGTCCCTTAGGA+AGG | + | chr5_1:61041904-61041923 | None:intergenic | 50.0% | |
| AGGAGGTAATCCCAAGAGAC+TGG | + | chr5_1:61041959-61041978 | None:intergenic | 50.0% | |
| TGGCACCCACCATAGCATTG+TGG | - | chr5_1:61040429-61040448 | Msa0741360:CDS | 55.0% | |
| GGCACCCACCATAGCATTGT+GGG | - | chr5_1:61040430-61040449 | Msa0741360:CDS | 55.0% | |
| GTGGAGGTAGATCAGAGACG+GGG | + | chr5_1:61041211-61041230 | None:intergenic | 55.0% | |
| GGTGGAGGTAGATCAGAGAC+GGG | + | chr5_1:61041212-61041231 | None:intergenic | 55.0% | |
| !!! | GGACTCGAGTTTTGAGCGCT+TGG | + | chr5_1:61041357-61041376 | None:intergenic | 55.0% |
| CGATCTGCCACCCAACATAG+CGG | + | chr5_1:61041584-61041603 | None:intergenic | 55.0% | |
| !! | GAAGAGCATCGTCCAGTTCC+TGG | - | chr5_1:61041668-61041687 | Msa0741360:CDS | 55.0% |
| GCATCGTCCAGTTCCTGGAT+TGG | - | chr5_1:61041673-61041692 | Msa0741360:CDS | 55.0% | |
| !! | GTCCAGTTCCTGGATTGGCA+AGG | - | chr5_1:61041678-61041697 | Msa0741360:CDS | 55.0% |
| TTTCCTTGGGGAGGTAGTGC+TGG | - | chr5_1:61041821-61041840 | Msa0741360:CDS | 55.0% | |
| GGGACACTTGCACTTCATGG+AGG | - | chr5_1:61041910-61041929 | Msa0741360:CDS | 55.0% | |
| TGGCACCCACCATAGCATTG+TGG | - | chr5_1:61040429-61040448 | Msa0741360:CDS | 55.0% | |
| GGCACCCACCATAGCATTGT+GGG | - | chr5_1:61040430-61040449 | Msa0741360:CDS | 55.0% | |
| GTGGAGGTAGATCAGAGACG+GGG | + | chr5_1:61041211-61041230 | None:intergenic | 55.0% | |
| GGTGGAGGTAGATCAGAGAC+GGG | + | chr5_1:61041212-61041231 | None:intergenic | 55.0% | |
| !!! | GGACTCGAGTTTTGAGCGCT+TGG | + | chr5_1:61041357-61041376 | None:intergenic | 55.0% |
| CGATCTGCCACCCAACATAG+CGG | + | chr5_1:61041584-61041603 | None:intergenic | 55.0% | |
| !! | GAAGAGCATCGTCCAGTTCC+TGG | - | chr5_1:61041668-61041687 | Msa0741360:CDS | 55.0% |
| GCATCGTCCAGTTCCTGGAT+TGG | - | chr5_1:61041673-61041692 | Msa0741360:CDS | 55.0% | |
| !! | GTCCAGTTCCTGGATTGGCA+AGG | - | chr5_1:61041678-61041697 | Msa0741360:CDS | 55.0% |
| TTTCCTTGGGGAGGTAGTGC+TGG | - | chr5_1:61041821-61041840 | Msa0741360:CDS | 55.0% | |
| GGGACACTTGCACTTCATGG+AGG | - | chr5_1:61041910-61041929 | Msa0741360:CDS | 55.0% | |
| GACAGGCACTCCGTACCCAT+TGG | - | chr5_1:61040805-61040824 | Msa0741360:CDS | 60.0% | |
| GGATGGGGGAAGCCTGTGTT+TGG | - | chr5_1:61041788-61041807 | Msa0741360:CDS | 60.0% | |
| TAGCCAGCACTACCTCCCCA+AGG | + | chr5_1:61041827-61041846 | None:intergenic | 60.0% | |
| CTTGCACTTCATGGAGGCCC+AGG | - | chr5_1:61041916-61041935 | Msa0741360:CDS | 60.0% | |
| GACAGGCACTCCGTACCCAT+TGG | - | chr5_1:61040805-61040824 | Msa0741360:CDS | 60.0% | |
| GGATGGGGGAAGCCTGTGTT+TGG | - | chr5_1:61041788-61041807 | Msa0741360:CDS | 60.0% | |
| TAGCCAGCACTACCTCCCCA+AGG | + | chr5_1:61041827-61041846 | None:intergenic | 60.0% | |
| CTTGCACTTCATGGAGGCCC+AGG | - | chr5_1:61041916-61041935 | Msa0741360:CDS | 60.0% | |
| ! | GATGGAAGGTGGGCGTCGTG+GGG | + | chr5_1:61041162-61041181 | None:intergenic | 65.0% |
| ! | GGATGGAAGGTGGGCGTCGT+GGG | + | chr5_1:61041163-61041182 | None:intergenic | 65.0% |
| ! | TGGATGGAAGGTGGGCGTCG+TGG | + | chr5_1:61041164-61041183 | None:intergenic | 65.0% |
| TTTGGAGGCGGCGGTGACAG+AGG | - | chr5_1:61041616-61041635 | Msa0741360:CDS | 65.0% | |
| ! | GATGGAAGGTGGGCGTCGTG+GGG | + | chr5_1:61041162-61041181 | None:intergenic | 65.0% |
| ! | GGATGGAAGGTGGGCGTCGT+GGG | + | chr5_1:61041163-61041182 | None:intergenic | 65.0% |
| ! | TGGATGGAAGGTGGGCGTCG+TGG | + | chr5_1:61041164-61041183 | None:intergenic | 65.0% |
| TTTGGAGGCGGCGGTGACAG+AGG | - | chr5_1:61041616-61041635 | Msa0741360:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 61040262 | 61041985 | 61040262 | ID=Msa0741360;Name=Msa0741360 |
| chr5_1 | mRNA | 61040262 | 61041985 | 61040262 | ID=Msa0741360-mRNA-1;Parent=Msa0741360;Name=Msa0741360-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|472 |
| chr5_1 | exon | 61041566 | 61041985 | 61041566 | ID=Msa0741360-mRNA-1:exon:17645;Parent=Msa0741360-mRNA-1 |
| chr5_1 | exon | 61040262 | 61041260 | 61040262 | ID=Msa0741360-mRNA-1:exon:17644;Parent=Msa0741360-mRNA-1 |
| chr5_1 | CDS | 61041566 | 61041985 | 61041566 | ID=Msa0741360-mRNA-1:cds;Parent=Msa0741360-mRNA-1 |
| chr5_1 | CDS | 61040262 | 61041260 | 61040262 | ID=Msa0741360-mRNA-1:cds;Parent=Msa0741360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
