AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1106680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106680 MtrunA17_Chr7g0239111 87.812 361 10 2 1 327 1 361 0.0 640
Msa1106680 MtrunA17_Chr7g0239121 74.444 360 57 2 5 329 1 360 0.0 546
Msa1106680 MtrunA17_Chr7g0239101 70.868 357 70 2 1 323 1 357 0.0 528
Msa1106680 MtrunA17_Chr7g0239821 60.615 358 107 2 1 324 10 367 1.08e-165 466
Msa1106680 MtrunA17_Chr7g0232161 68.027 294 55 3 1 255 1 294 1.60e-139 398
Msa1106680 MtrunA17_Chr7g0239071 67.483 286 58 3 78 329 24 308 1.69e-134 385
Msa1106680 MtrunA17_Chr7g0239091 52.260 354 125 4 6 328 117 457 7.98e-123 360
Msa1106680 MtrunA17_Chr2g0296371 36.994 346 177 6 17 323 14 357 2.37e-80 248
Msa1106680 MtrunA17_Chr5g0421011 35.143 350 186 4 11 323 4 349 3.68e-78 243
Msa1106680 MtrunA17_Chr5g0423201 36.494 348 185 4 12 324 5 351 1.61e-77 241
Msa1106680 MtrunA17_Chr5g0423221 35.112 356 195 4 3 323 20 374 2.63e-76 239
Msa1106680 MtrunA17_Chr5g0421041 34.582 347 190 4 11 323 4 347 7.68e-76 236
Msa1106680 MtrunA17_Chr8g0365241 35.942 345 185 4 14 323 17 360 1.33e-75 236
Msa1106680 MtrunA17_Chr8g0375671 34.770 348 188 4 14 323 12 358 1.45e-75 236
Msa1106680 MtrunA17_Chr2g0314401 33.815 346 190 5 14 322 11 354 2.18e-75 235
Msa1106680 MtrunA17_Chr5g0420951 34.783 345 190 3 14 323 12 356 2.92e-74 233
Msa1106680 MtrunA17_Chr5g0421101 33.718 347 195 3 14 326 7 352 4.67e-74 232
Msa1106680 MtrunA17_Chr5g0420941 34.870 347 191 3 14 326 5 350 4.83e-73 229
Msa1106680 MtrunA17_Chr5g0423191 34.870 347 191 4 11 323 4 349 6.56e-73 229
Msa1106680 MtrunA17_Chr5g0423251 33.908 348 195 4 11 324 4 350 7.39e-73 229
Msa1106680 MtrunA17_Chr5g0420981 34.393 346 192 3 14 324 12 357 8.75e-73 229
Msa1106680 MtrunA17_Chr8g0375601 34.278 353 181 5 16 323 7 353 7.44e-71 224
Msa1106680 MtrunA17_Chr2g0314391 35.447 347 185 5 14 323 30 374 7.90e-71 224
Msa1106680 MtrunA17_Chr5g0420901 33.238 349 192 4 17 328 9 353 1.58e-69 220
Msa1106680 MtrunA17_Chr8g0375571 33.141 347 193 4 14 322 5 350 3.56e-67 214
Msa1106680 MtrunA17_Chr2g0314381 35.057 348 186 6 14 323 36 381 4.37e-67 215
Msa1106680 MtrunA17_Chr5g0421091 33.046 348 197 4 14 326 5 351 8.76e-67 213
Msa1106680 MtrunA17_Chr3g0087031 33.140 344 189 6 7 312 11 351 1.06e-65 211
Msa1106680 MtrunA17_Chr5g0423211 32.565 347 189 6 17 323 10 351 2.23e-65 209
Msa1106680 MtrunA17_Chr3g0113641 34.251 327 175 4 16 302 11 337 2.20e-62 202
Msa1106680 MtrunA17_Chr5g0437181 34.557 327 174 4 16 302 10 336 5.74e-62 201
Msa1106680 MtrunA17_Chr7g0242551 34.940 332 171 7 16 302 11 342 1.46e-60 197
Msa1106680 MtrunA17_Chr8g0375701 32.571 350 200 5 8 322 7 355 1.47e-60 197
Msa1106680 MtrunA17_Chr4g0006371 36.391 327 158 6 18 302 32 350 1.14e-59 196
Msa1106680 MtrunA17_Chr1g0162191 32.370 346 185 7 11 316 8 344 4.68e-59 193
Msa1106680 MtrunA17_Chr8g0370721 33.819 343 186 7 19 322 14 354 1.14e-58 192
Msa1106680 MtrunA17_Chr8g0375681 33.333 273 148 2 86 324 15 287 1.52e-58 190
Msa1106680 MtrunA17_Chr3g0145171 35.587 281 144 4 55 298 52 332 2.33e-57 189
Msa1106680 MtrunA17_Chr8g0370711 33.236 343 188 7 19 322 14 354 1.01e-53 179
Msa1106680 MtrunA17_Chr5g0424201 33.123 317 171 6 31 309 20 333 5.99e-53 177
Msa1106680 MtrunA17_Chr2g0314371 30.063 316 161 7 14 271 11 324 1.29e-51 173
Msa1106680 MtrunA17_Chr4g0064781 34.629 283 147 5 55 301 50 330 1.25e-50 171
Msa1106680 MtrunA17_Chr5g0398291 30.398 352 192 9 20 321 8 356 2.73e-50 171
Msa1106680 MtrunA17_Chr5g0420721 33.871 248 130 3 110 323 4 251 3.33e-49 165
Msa1106680 MtrunA17_Chr1g0179801 31.844 358 192 10 19 328 26 379 5.09e-49 168
Msa1106680 MtrunA17_Chr5g0424211 33.225 307 162 7 25 291 12 315 5.37e-49 167
Msa1106680 MtrunA17_Chr3g0109041 30.523 344 191 10 20 319 10 349 6.00e-49 167
Msa1106680 MtrunA17_Chr5g0426891 32.653 343 189 10 19 322 3 342 7.46e-49 166
Msa1106680 MtrunA17_Chr4g0050031 31.909 351 199 8 11 322 17 366 1.33e-48 166
Msa1106680 MtrunA17_Chr3g0128001 31.231 333 182 6 30 328 14 333 1.02e-47 163
Msa1106680 MtrunA17_Chr7g0239081 79.787 94 14 1 1 89 1 94 4.54e-47 154
Msa1106680 MtrunA17_Chr4g0045451 30.678 339 178 7 30 314 3 338 1.20e-46 161
Msa1106680 MtrunA17_Chr3g0102041 30.655 336 189 9 16 312 3 333 2.38e-46 160
Msa1106680 MtrunA17_Chr7g0265221 30.548 347 184 9 30 322 37 380 2.85e-46 161
Msa1106680 MtrunA17_Chr3g0114861 31.118 331 171 8 17 302 3 321 7.80e-46 158
Msa1106680 MtrunA17_Chr5g0412671 32.024 331 182 8 25 314 9 337 7.72e-45 156
Msa1106680 MtrunA17_Chr1g0162351 31.085 341 167 10 47 325 57 391 1.37e-44 157
Msa1106680 MtrunA17_Chr5g0412651 31.858 339 188 8 25 322 9 345 1.74e-44 155
Msa1106680 MtrunA17_Chr5g0412681 34.021 291 148 7 51 303 29 313 3.19e-44 154
Msa1106680 MtrunA17_Chr8g0371931 31.402 328 183 8 33 321 18 342 5.52e-44 154
Msa1106680 MtrunA17_Chr4g0045471 30.931 333 168 10 30 305 3 330 1.03e-43 153
Msa1106680 MtrunA17_Chr5g0405411 33.564 289 151 6 33 282 18 304 1.05e-43 153
Msa1106680 MtrunA17_Chr4g0045441 32.362 309 156 7 56 314 33 338 1.34e-43 153
Msa1106680 MtrunA17_Chr7g0265351 32.716 324 164 11 42 322 25 337 1.44e-43 152
Msa1106680 MtrunA17_Chr8g0345831 28.529 340 206 6 18 322 6 343 1.63e-43 152
Msa1106680 MtrunA17_Chr3g0145181 31.173 324 176 9 19 298 12 332 2.87e-43 152
Msa1106680 MtrunA17_Chr1g0162321 30.499 341 169 10 47 325 57 391 3.17e-43 153
Msa1106680 MtrunA17_Chr8g0371921 30.060 336 191 9 16 312 3 333 5.87e-43 152
Msa1106680 MtrunA17_Chr3g0125201 32.526 289 151 9 55 303 3 287 1.40e-42 149
Msa1106680 MtrunA17_Chr4g0045431 31.210 314 161 6 55 314 26 338 4.41e-42 149
Msa1106680 MtrunA17_Chr1g0184151 31.447 318 173 9 31 309 15 326 1.61e-41 147
Msa1106680 MtrunA17_Chr1g0162361 29.841 315 162 8 42 302 9 318 1.63e-41 147
Msa1106680 MtrunA17_Chr4g0045411 31.353 303 154 8 51 302 26 325 8.06e-41 145
Msa1106680 MtrunA17_Chr1g0184161 30.031 323 181 9 26 309 10 326 8.35e-41 145
Msa1106680 MtrunA17_Chr3g0093761 30.029 343 195 11 19 322 17 353 9.07e-41 145
Msa1106680 MtrunA17_Chr3g0145201 32.168 286 150 7 55 298 684 967 1.19e-39 148
Msa1106680 MtrunA17_Chr3g0093751 30.233 344 194 12 19 322 17 354 1.60e-39 142
Msa1106680 MtrunA17_Chr3g0093741 30.233 344 194 12 19 322 17 354 2.43e-39 142
Msa1106680 MtrunA17_Chr6g0455481 29.795 292 160 8 52 304 39 324 5.81e-39 140
Msa1106680 MtrunA17_Chr3g0126741 28.000 325 195 7 31 318 35 357 6.52e-39 141
Msa1106680 MtrunA17_Chr2g0311921 29.052 327 189 8 19 305 18 341 7.33e-39 140
Msa1106680 MtrunA17_Chr2g0332191 26.176 340 192 8 17 303 1 334 6.27e-38 138
Msa1106680 MtrunA17_Chr3g0114871 35.246 244 132 7 20 242 7 245 7.73e-38 136
Msa1106680 MtrunA17_Chr1g0184111 28.571 322 184 9 31 312 14 329 1.56e-37 137
Msa1106680 MtrunA17_Chr2g0311691 28.529 333 191 8 19 307 26 355 1.67e-37 137
Msa1106680 MtrunA17_Chr8g0375641 44.755 143 74 2 14 152 12 153 1.91e-37 132
Msa1106680 MtrunA17_Chr1g0204181 28.319 339 193 8 29 321 36 370 3.01e-37 137
Msa1106680 MtrunA17_Chr3g0121141 30.068 296 165 6 55 314 4 293 3.33e-37 135
Msa1106680 MtrunA17_Chr1g0184121 27.900 319 184 9 31 309 14 326 1.30e-36 134
Msa1106680 MtrunA17_Chr5g0439011 29.412 289 160 6 55 304 5 288 1.88e-36 133
Msa1106680 MtrunA17_Chr2g0311681 27.795 331 196 7 19 307 26 355 3.75e-36 134
Msa1106680 MtrunA17_Chr2g0311631 28.198 344 204 9 19 322 21 361 6.03e-36 133
Msa1106680 MtrunA17_Chr4g0066121 29.293 297 166 9 55 310 60 353 7.47e-36 133
Msa1106680 MtrunA17_Chr2g0311761 26.426 333 204 7 19 312 32 362 1.20e-35 132
Msa1106680 MtrunA17_Chr7g0220011 29.808 312 174 8 31 304 16 320 2.50e-35 130
Msa1106680 MtrunA17_Chr8g0375661 40.909 154 84 3 5 152 1 153 3.47e-35 125
Msa1106680 MtrunA17_Chr2g0289341 27.609 297 173 6 55 314 4 295 3.57e-35 130
Msa1106680 MtrunA17_Chr8g0336851 27.300 337 193 10 19 312 27 354 4.26e-35 130
Msa1106680 MtrunA17_Chr2g0311831 27.327 333 200 8 19 312 32 361 4.37e-35 131
Msa1106680 MtrunA17_Chr8g0336781 27.811 338 191 11 19 312 62 390 6.39e-35 131
Msa1106680 MtrunA17_Chr8g0348081 27.829 327 190 11 19 305 27 347 8.61e-35 130
Msa1106680 MtrunA17_Chr1g0191201 27.114 343 191 6 18 306 11 348 8.70e-35 130
Msa1106680 MtrunA17_Chr2g0311741 31.119 286 155 9 55 302 27 308 1.12e-34 129
Msa1106680 MtrunA17_Chr8g0336751 28.136 295 174 6 55 312 94 387 2.55e-34 129
Msa1106680 MtrunA17_Chr8g0336631 29.352 293 161 10 52 302 57 345 3.87e-34 128
Msa1106680 MtrunA17_Chr2g0319491 28.383 303 174 9 54 322 32 325 4.02e-34 127
Msa1106680 MtrunA17_Chr1g0184241 26.498 317 200 6 19 303 33 348 1.47e-33 127
Msa1106680 MtrunA17_Chr8g0354261 27.414 321 188 8 19 297 32 349 1.93e-33 127
Msa1106680 MtrunA17_Chr1g0187821 27.609 297 173 7 55 312 67 360 2.44e-33 126
Msa1106680 MtrunA17_Chr1g0184101 28.707 317 184 9 26 304 9 321 3.24e-33 125
Msa1106680 MtrunA17_Chr8g0336761 29.252 294 159 10 52 302 57 344 3.74e-33 125
Msa1106680 MtrunA17_Chr4g0045461 29.217 332 173 8 42 314 9 337 3.98e-33 125
Msa1106680 MtrunA17_Chr6g0474391 26.688 311 179 7 29 294 41 347 4.03e-33 126
Msa1106680 MtrunA17_Chr8g0354241 26.361 349 208 9 19 323 32 375 9.85e-33 125
Msa1106680 MtrunA17_Chr1g0161041 28.024 339 205 8 19 321 59 394 1.93e-32 124
Msa1106680 MtrunA17_Chr1g0187831 26.230 305 186 6 49 315 64 367 2.40e-32 124
Msa1106680 MtrunA17_Chr2g0311701 26.846 298 176 6 55 311 69 365 3.36e-32 123
Msa1106680 MtrunA17_Chr2g0311711 25.581 344 202 10 4 305 23 354 3.66e-32 123
Msa1106680 MtrunA17_Chr8g0351101 27.429 350 195 9 10 308 9 350 3.90e-32 123
Msa1106680 MtrunA17_Chr7g0250511 27.796 313 179 9 51 322 45 351 5.74e-32 122
Msa1106680 MtrunA17_Chr7g0235951 27.419 310 180 10 55 322 67 373 1.07e-31 122
Msa1106680 MtrunA17_Chr3g0130391 25.559 313 182 6 56 323 67 373 1.55e-31 122
Msa1106680 MtrunA17_Chr1g0187811 26.263 297 179 6 55 312 188 483 1.63e-31 123
Msa1106680 MtrunA17_Chr2g0311861 26.625 323 181 7 19 305 28 330 7.71e-31 119
Msa1106680 MtrunA17_Chr7g0225881 27.241 290 165 9 55 303 67 351 9.85e-31 119
Msa1106680 MtrunA17_Chr3g0125421 27.586 319 181 6 30 303 15 328 1.31e-30 119
Msa1106680 MtrunA17_Chr6g0472861 26.667 330 193 10 19 302 27 353 2.86e-30 118
Msa1106680 MtrunA17_Chr7g0266651 25.301 332 206 9 31 323 35 363 5.53e-30 117
Msa1106680 MtrunA17_Chr6g0488511 29.492 295 151 8 55 301 3 288 9.04e-30 115
Msa1106680 MtrunA17_Chr8g0336861 26.627 338 191 11 19 310 27 353 1.11e-29 116
Msa1106680 MtrunA17_Chr7g0220001 27.273 319 185 8 30 309 17 327 1.26e-29 115
Msa1106680 MtrunA17_Chr1g0161081 27.300 337 204 9 19 318 36 368 6.61e-29 114
Msa1106680 MtrunA17_Chr8g0375591 40.945 127 71 1 14 136 5 131 1.54e-28 107
Msa1106680 MtrunA17_Chr8g0335411 24.928 345 215 11 19 322 32 373 1.57e-28 113
Msa1106680 MtrunA17_Chr1g0167961 26.364 330 200 9 19 309 34 359 1.68e-28 113
Msa1106680 MtrunA17_Chr5g0420881 35.333 150 78 1 198 328 1 150 1.82e-28 107
Msa1106680 MtrunA17_Chr8g0358941 25.776 322 182 10 51 324 23 335 3.93e-28 111
Msa1106680 MtrunA17_Chr1g0167911 27.778 288 169 7 19 271 19 302 5.38e-28 111
Msa1106680 MtrunA17_Chr1g0161111 27.381 336 205 11 19 318 95 427 6.04e-27 110
Msa1106680 MtrunA17_Chr5g0420891 36.957 138 80 2 17 151 9 142 7.68e-27 103
Msa1106680 MtrunA17_Chr7g0247991 27.660 329 192 12 19 305 32 356 1.10e-26 108
Msa1106680 MtrunA17_Chr4g0055591 24.739 287 177 6 53 303 59 342 1.65e-26 107
Msa1106680 MtrunA17_Chr8g0364471 24.096 332 208 9 19 309 32 360 5.75e-26 106
Msa1106680 MtrunA17_Chr4g0053251 26.861 309 166 10 53 303 6 312 1.79e-25 104
Msa1106680 MtrunA17_Chr8g0384461 24.198 343 202 9 30 326 25 355 2.01e-25 104
Msa1106680 MtrunA17_Chr2g0285931 25.753 299 166 10 51 302 24 313 3.92e-25 103
Msa1106680 MtrunA17_Chr2g0313111 26.948 308 169 14 35 302 14 305 9.60e-25 102
Msa1106680 MtrunA17_Chr4g0068891 26.689 296 173 9 55 311 20 310 1.52e-24 101
Msa1106680 MtrunA17_Chr1g0194321 27.575 301 158 11 55 302 20 313 5.04e-24 100
Msa1106680 MtrunA17_Chr1g0148771 27.170 265 152 7 52 281 60 318 9.28e-24 100
Msa1106680 MtrunA17_Chr1g0170631 35.751 193 98 5 153 322 3 192 1.12e-23 96.3
Msa1106680 MtrunA17_Chr4g0066991 24.585 301 166 10 55 315 67 346 3.07e-23 98.6
Msa1106680 MtrunA17_Chr1g0167951 26.190 294 178 6 55 311 53 344 4.32e-23 98.2
Msa1106680 MtrunA17_Chr3g0092531 28.520 277 155 10 74 316 30 297 1.26e-22 96.3
Msa1106680 MtrunA17_Chr7g0236011 24.749 299 182 10 55 312 67 363 1.97e-22 96.7
Msa1106680 MtrunA17_Chr8g0348951 27.500 320 178 13 54 326 9 321 6.77e-22 94.4
Msa1106680 MtrunA17_Chr8g0384481 22.903 310 185 9 54 315 58 361 1.10e-21 94.4
Msa1106680 MtrunA17_Chr7g0235981 23.864 264 158 6 88 312 58 317 1.73e-21 93.2
Msa1106680 MtrunA17_Chr4g0055911 28.339 307 157 11 55 308 9 305 2.64e-21 92.8
Msa1106680 MtrunA17_Chr5g0407731 24.503 302 187 8 50 317 28 322 1.15e-20 90.9
Msa1106680 MtrunA17_Chr4g0064771 26.446 242 119 5 96 317 6 208 1.94e-20 87.8
Msa1106680 MtrunA17_Chr5g0407781 24.913 289 178 8 55 311 5 286 4.26e-20 89.0
Msa1106680 MtrunA17_Chr4g0011311 27.751 209 125 7 55 243 67 269 4.49e-20 89.0
Msa1106680 MtrunA17_Chr3g0126761 31.395 172 95 4 153 303 44 213 4.74e-20 87.4
Msa1106680 MtrunA17_Chr4g0075471 34.848 132 63 3 195 304 26 156 1.08e-19 84.7
Msa1106680 MtrunA17_Chr5g0394071 32.143 168 88 3 154 302 3 163 2.03e-19 84.7
Msa1106680 MtrunA17_Chr3g0138351 25.733 307 177 10 54 313 6 308 3.07e-19 86.7
Msa1106680 MtrunA17_Chr1g0167931 23.885 314 181 9 19 305 19 301 3.23e-19 86.7
Msa1106680 MtrunA17_Chr8g0336831 26.577 222 139 6 19 221 27 243 6.85e-19 84.7
Msa1106680 MtrunA17_Chr4g0052251 25.177 282 161 10 76 311 45 322 1.89e-18 84.7
Msa1106680 MtrunA17_Chr4g0009561 24.843 318 187 12 53 322 5 318 3.20e-18 84.0
Msa1106680 MtrunA17_Chr7g0247741 27.055 292 167 12 53 304 9 294 4.52e-18 83.6
Msa1106680 MtrunA17_Chr6g0486831 26.543 324 174 13 53 319 16 332 1.29e-16 79.7
Msa1106680 MtrunA17_Chr4g0009541 26.403 303 168 12 51 305 3 298 2.60e-16 78.2
Msa1106680 MtrunA17_Chr7g0233661 35.714 126 55 3 196 302 19 137 3.12e-16 75.1
Msa1106680 MtrunA17_Chr7g0256741 26.230 305 176 13 51 312 6 304 3.31e-15 75.1
Msa1106680 MtrunA17_Chr4g0037611 30.114 176 90 7 162 316 3 166 4.14e-15 72.4
Msa1106680 MtrunA17_Chr8g0375581 42.857 70 40 0 174 243 1 70 4.93e-15 69.7
Msa1106680 MtrunA17_Chr4g0004061 25.879 313 171 11 50 313 4 304 7.32e-15 74.3
Msa1106680 MtrunA17_Chr4g0004071 26.885 305 173 13 52 313 6 303 1.84e-14 73.2
Msa1106680 MtrunA17_Chr1g0158011 31.609 174 95 5 154 304 71 243 2.34e-14 72.0
Msa1106680 MtrunA17_Chr8g0336801 29.286 140 76 3 198 315 11 149 1.44e-13 67.4
Msa1106680 MtrunA17_Chr1g0158021 28.111 217 130 8 46 243 41 250 5.37e-13 68.2
Msa1106680 MtrunA17_Chr4g0037601 36.082 97 56 4 53 145 38 132 7.46e-13 65.9
Msa1106680 MtrunA17_Chr8g0362741 24.020 204 124 8 55 243 67 254 1.43e-12 67.0
Msa1106680 MtrunA17_Chr8g0336871 28.485 165 97 5 166 312 3 164 2.13e-12 64.7
Msa1106680 MtrunA17_Chr1g0161101 39.706 136 63 7 152 273 361 491 1.44e-11 65.1
Msa1106680 MtrunA17_Chr1g0148781 23.355 304 173 11 55 305 8 304 7.09e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106680 AT3G21420.1 37.249 349 176 6 17 322 14 362 2.46e-81 251
Msa1106680 AT1G78550.1 34.393 346 190 4 14 322 11 356 1.82e-73 231
Msa1106680 AT1G17020.1 35.632 348 185 5 14 322 11 358 2.37e-73 231
Msa1106680 AT4G25300.1 34.294 347 190 5 14 322 10 356 5.45e-72 227
Msa1106680 AT1G17010.1 35.920 348 184 6 14 322 11 358 2.42e-71 226
Msa1106680 AT2G38240.1 37.231 325 165 5 16 302 8 331 2.07e-67 215
Msa1106680 AT4G25310.1 34.770 348 184 7 14 322 10 353 5.73e-65 209
Msa1106680 AT3G11180.1 33.945 327 176 5 16 302 52 378 3.16e-63 206
Msa1106680 AT3G11180.2 33.945 327 176 5 16 302 52 378 5.95e-63 205
Msa1106680 AT5G05600.1 31.778 343 194 5 16 318 23 365 1.72e-60 198
Msa1106680 AT5G20400.1 34.161 322 167 8 19 298 8 326 6.70e-56 185
Msa1106680 AT1G49390.1 34.356 326 168 9 19 301 8 330 1.05e-55 185
Msa1106680 AT5G20550.1 36.207 290 145 5 54 303 44 333 7.05e-55 183
Msa1106680 AT3G55970.1 33.807 352 186 8 16 321 10 360 1.46e-54 182
Msa1106680 AT1G78550.2 31.387 274 154 2 83 322 5 278 3.17e-54 179
Msa1106680 AT5G54000.2 34.982 283 146 4 54 298 45 327 7.12e-52 175
Msa1106680 AT5G24530.1 32.710 321 176 6 31 314 15 332 1.13e-49 169
Msa1106680 AT2G36690.2 33.429 350 181 12 19 322 20 363 7.32e-48 165
Msa1106680 AT2G36690.1 33.429 350 181 12 19 322 20 363 7.32e-48 165
Msa1106680 AT4G22880.1 30.029 343 184 10 17 307 4 342 2.47e-47 163
Msa1106680 AT4G22880.2 30.029 343 184 10 17 307 4 342 2.47e-47 163
Msa1106680 AT4G22880.3 30.029 343 184 10 17 307 4 342 2.47e-47 163
Msa1106680 AT4G16330.2 30.341 323 177 9 36 319 48 361 7.01e-47 162
Msa1106680 AT3G19010.1 31.661 319 164 8 35 302 8 323 8.73e-47 162
Msa1106680 AT3G19010.4 31.661 319 164 8 35 302 8 323 8.73e-47 162
Msa1106680 AT1G49390.2 34.661 251 128 4 87 301 1 251 9.87e-47 159
Msa1106680 AT5G08640.2 30.915 317 178 7 31 309 19 332 3.75e-46 160
Msa1106680 AT5G08640.1 30.915 317 178 7 31 309 19 332 3.75e-46 160
Msa1106680 AT4G25310.2 31.124 347 170 9 14 322 10 325 1.32e-45 158
Msa1106680 AT1G55290.1 29.942 344 194 12 19 322 25 361 2.66e-45 158
Msa1106680 AT5G54000.1 33.603 247 129 3 87 298 1 247 9.85e-45 154
Msa1106680 AT5G05600.2 33.333 249 145 4 16 243 23 271 1.79e-44 154
Msa1106680 AT3G13610.1 30.029 343 194 11 19 322 26 361 5.09e-43 152
Msa1106680 AT3G51240.1 30.183 328 187 9 33 321 17 341 1.19e-42 151
Msa1106680 AT4G10500.1 28.571 329 198 6 29 321 18 345 2.28e-42 150
Msa1106680 AT4G10490.1 30.547 311 178 6 30 303 17 326 5.34e-42 149
Msa1106680 AT3G19010.3 31.615 291 171 7 35 302 8 293 2.10e-41 147
Msa1106680 AT5G63590.1 35.314 303 148 11 41 302 2 297 3.24e-40 143
Msa1106680 AT1G77330.1 30.986 284 161 5 55 303 3 286 8.08e-40 142
Msa1106680 AT3G55970.2 35.686 255 136 7 16 243 10 263 9.92e-40 142
Msa1106680 AT3G19000.1 31.494 308 150 8 51 303 28 329 2.91e-38 139
Msa1106680 AT2G30830.1 28.319 339 188 11 19 312 20 348 5.48e-38 139
Msa1106680 AT1G12010.1 28.571 301 172 6 50 314 2 295 6.82e-38 137
Msa1106680 AT5G63600.1 29.966 297 153 10 54 308 32 315 1.05e-36 134
Msa1106680 AT5G63600.2 29.866 298 153 10 54 308 32 316 1.75e-36 134
Msa1106680 AT1G62380.1 27.875 287 164 6 54 304 6 285 2.89e-36 133
Msa1106680 AT3G60290.1 26.513 347 207 9 19 323 15 355 5.55e-36 133
Msa1106680 AT5G07480.1 30.218 321 171 10 52 324 41 356 7.75e-36 133
Msa1106680 AT1G05010.1 30.479 292 155 8 55 304 4 289 1.38e-35 131
Msa1106680 AT4G25420.1 25.145 346 205 6 13 308 16 357 4.32e-35 131
Msa1106680 AT1G44090.1 29.773 309 168 8 54 318 62 365 4.92e-35 131
Msa1106680 AT2G44800.1 29.524 315 180 8 30 305 26 337 5.27e-35 130
Msa1106680 AT3G12900.1 27.811 338 206 9 19 321 21 355 3.76e-34 128
Msa1106680 AT4G16330.1 31.154 260 135 7 99 319 1 255 5.08e-34 125
Msa1106680 AT1G15550.1 28.475 295 166 8 49 304 51 339 1.00e-33 127
Msa1106680 AT1G50960.1 31.399 293 148 10 54 306 39 318 4.11e-33 125
Msa1106680 AT1G04380.1 27.124 306 180 8 49 316 39 339 5.14e-33 125
Msa1106680 AT4G21200.1 32.819 259 140 6 54 280 41 297 7.70e-33 124
Msa1106680 AT5G59530.1 28.852 305 172 12 54 316 57 358 9.68e-33 125
Msa1106680 AT2G19590.1 29.352 293 153 7 54 301 10 293 1.38e-32 123
Msa1106680 AT2G30840.1 26.706 337 198 11 19 311 20 351 2.26e-32 124
Msa1106680 AT5G59540.1 27.597 308 183 9 54 322 60 366 3.13e-32 123
Msa1106680 AT5G43440.1 25.962 312 187 9 51 322 58 365 3.82e-32 123
Msa1106680 AT1G80330.1 28.912 294 158 11 55 304 49 335 1.12e-31 122
Msa1106680 AT3G19010.2 31.967 244 130 8 32 243 6 245 2.15e-31 120
Msa1106680 AT2G30840.3 27.492 331 197 12 19 311 20 345 2.49e-31 121
Msa1106680 AT5G07200.1 25.902 305 176 6 30 288 36 336 4.23e-31 120
Msa1106680 AT5G51810.1 25.000 340 200 8 10 308 30 355 6.55e-31 120
Msa1106680 AT5G43450.1 26.524 328 191 11 29 316 39 356 6.79e-31 120
Msa1106680 AT1G78440.1 26.730 318 168 12 53 315 16 323 1.23e-30 118
Msa1106680 AT1G04350.1 26.012 346 208 12 19 322 21 360 1.34e-30 119
Msa1106680 AT1G06620.1 28.571 294 160 8 54 304 61 347 1.96e-30 119
Msa1106680 AT1G06640.1 25.532 329 196 10 19 302 25 349 2.84e-30 118
Msa1106680 AT1G06650.2 29.153 295 153 11 55 302 64 349 5.13e-30 117
Msa1106680 AT5G63595.1 30.153 262 134 8 52 282 22 265 1.96e-29 114
Msa1106680 AT1G06645.1 29.066 289 158 12 55 302 77 359 2.58e-29 116
Msa1106680 AT3G19000.2 32.751 229 112 7 51 243 28 250 5.18e-29 113
Msa1106680 AT5G12270.1 28.012 332 194 9 31 322 33 359 5.32e-29 114
Msa1106680 AT4G21690.1 26.543 324 178 10 26 303 24 333 9.65e-29 114
Msa1106680 AT5G43935.1 27.055 292 151 8 51 303 15 283 2.60e-28 111
Msa1106680 AT3G49620.1 27.219 338 180 13 30 303 7 342 3.35e-28 112
Msa1106680 AT4G25300.2 29.474 190 114 2 153 322 73 262 5.19e-28 110
Msa1106680 AT1G80340.1 26.389 288 167 8 55 303 50 331 1.91e-27 110
Msa1106680 AT1G60980.1 25.532 329 190 8 28 308 33 354 3.02e-27 110
Msa1106680 AT3G51240.2 27.799 259 149 6 99 321 1 257 5.00e-26 105
Msa1106680 AT3G49630.1 26.625 323 175 11 51 312 5 326 5.05e-26 106
Msa1106680 AT4G25420.2 24.904 261 161 5 13 242 16 272 5.08e-26 105
Msa1106680 AT1G03410.2 26.316 266 159 7 73 302 78 342 7.24e-26 106
Msa1106680 AT1G03410.1 26.316 266 159 7 73 302 115 379 1.42e-25 105
Msa1106680 AT3G49630.3 27.273 297 165 10 66 312 27 322 1.97e-25 104
Msa1106680 AT1G03400.1 24.534 322 197 10 19 302 19 332 2.06e-25 104
Msa1106680 AT3G50210.4 26.349 315 166 10 55 303 8 322 9.60e-25 102
Msa1106680 AT3G50210.1 26.349 315 166 10 55 303 8 322 9.60e-25 102
Msa1106680 AT3G50210.3 26.349 315 166 10 55 303 8 322 9.60e-25 102
Msa1106680 AT1G04380.2 29.858 211 127 6 49 243 39 244 1.67e-24 100
Msa1106680 AT1G30040.1 25.325 308 177 11 48 311 23 321 1.81e-24 102
Msa1106680 AT1G06620.2 30.288 208 123 5 54 243 61 264 2.23e-24 100
Msa1106680 AT1G06640.3 26.016 246 158 6 19 243 25 267 2.48e-24 100
Msa1106680 AT1G02400.1 26.797 306 166 12 55 312 24 319 3.36e-24 101
Msa1106680 AT2G30840.2 27.126 247 153 7 19 243 20 261 3.87e-24 100
Msa1106680 AT1G06640.2 26.016 246 158 6 19 243 25 267 4.12e-24 100
Msa1106680 AT5G63580.1 33.632 223 102 9 51 243 15 221 4.99e-24 99.0
Msa1106680 AT5G63580.2 33.632 223 102 9 51 243 15 221 5.41e-24 98.6
Msa1106680 AT2G34555.1 27.425 299 166 12 55 311 27 316 5.93e-24 100
Msa1106680 AT3G61400.1 28.090 267 154 9 73 302 86 351 1.39e-23 100
Msa1106680 AT1G06650.1 30.952 210 118 7 55 243 64 267 2.07e-23 98.6
Msa1106680 AT5G59540.2 29.469 207 128 6 54 243 60 265 3.83e-23 97.4
Msa1106680 AT2G19590.2 28.090 267 139 6 79 301 21 278 5.07e-23 97.4
Msa1106680 AT5G43440.2 26.667 210 134 6 51 243 58 264 6.84e-23 96.7
Msa1106680 AT1G47990.1 25.987 304 172 11 54 312 14 309 8.55e-23 97.1
Msa1106680 AT2G25450.1 25.733 307 187 9 55 322 55 359 2.33e-22 96.7
Msa1106680 AT5G51810.2 25.098 255 155 7 10 242 30 270 2.48e-22 95.5
Msa1106680 AT5G43450.2 27.155 232 143 8 29 243 39 261 3.32e-22 94.7
Msa1106680 AT1G03400.2 22.571 350 197 10 19 302 19 360 2.89e-21 93.6
Msa1106680 AT4G23340.1 26.804 291 171 10 52 304 7 293 3.79e-21 92.8
Msa1106680 AT5G07480.2 31.156 199 108 5 153 324 51 247 1.19e-20 89.7
Msa1106680 AT3G46500.5 27.129 317 170 14 37 303 4 309 1.18e-19 88.6
Msa1106680 AT1G14130.1 27.143 280 161 8 55 299 9 280 1.40e-19 87.8
Msa1106680 AT5G51310.1 25.672 335 176 15 51 324 1 323 1.52e-18 85.1
Msa1106680 AT3G61400.2 28.649 185 117 5 73 243 86 269 2.77e-17 81.3
Msa1106680 AT1G30040.2 26.697 221 128 10 48 243 23 234 6.05e-15 74.3
Msa1106680 AT3G46490.1 26.897 290 155 13 74 308 34 321 6.67e-15 74.7
Msa1106680 AT3G46500.7 25.993 277 145 12 37 263 4 270 1.79e-14 73.2
Msa1106680 AT3G46490.2 27.046 281 144 15 74 297 34 310 3.00e-13 69.7
Msa1106680 AT3G49630.2 26.486 185 110 5 153 312 70 253 5.38e-13 68.6
Msa1106680 AT1G52820.1 26.441 295 175 12 49 304 6 297 5.79e-13 68.9
Msa1106680 AT1G28030.1 25.243 309 167 12 50 306 8 304 8.10e-13 68.6
Msa1106680 AT4G16770.1 27.143 210 121 7 54 236 21 225 1.01e-11 64.7
Msa1106680 AT1G02400.2 27.650 217 119 10 55 243 24 230 1.95e-11 63.9
Msa1106680 AT1G35190.1 25.329 304 165 12 58 303 12 311 9.24e-11 62.4

Find 60 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTTTCTGGTACATCTT+AGG 0.151663 7_3:+46803081 None:intergenic
CAAGGAGTGGGGTTTCTTTC+AGG 0.164682 7_3:-46807409 Msa1106680:intron
AATCTCCATACTTCACTTTC+TGG 0.165711 7_3:+46803070 None:intergenic
AAATCAGAAACAAAGGAAAT+TGG 0.219833 7_3:-46803585 Msa1106680:CDS
CCAAACGACATACAAGGATA+TGG 0.299335 7_3:-46804310 Msa1106680:CDS
TTCACCATTTCTTGAACATT+TGG 0.301496 7_3:+46807591 None:intergenic
CCATATCCTTGTATGTCGTT+TGG 0.313108 7_3:+46804310 None:intergenic
TCACTTTCTGGTACATCTTA+GGG 0.333938 7_3:+46803082 None:intergenic
CATCCCTCATTCTCTGTATA+AGG 0.338709 7_3:+46804389 None:intergenic
CATATCCTTGTATGTCGTTT+GGG 0.377345 7_3:+46804311 None:intergenic
CAACAATCCTGAGCAAGTAT+TGG 0.377801 7_3:-46803677 Msa1106680:CDS
AACAATCCTGAGCAAGTATT+GGG 0.378268 7_3:-46803676 Msa1106680:CDS
CTGAGGAGCAAACACTTGAT+TGG 0.384397 7_3:-46804270 Msa1106680:CDS
TGTGAGGAATGAAGAAGAAA+TGG 0.399636 7_3:-46807538 Msa1106680:CDS
ATGTACCAGAAAGTGAAGTA+TGG 0.407509 7_3:-46803075 Msa1106680:CDS
CTGCATAAAGAATTAATTCA+AGG 0.419760 7_3:-46803727 Msa1106680:CDS
ATTTCTTGAACATTTGGAAC+TGG 0.421024 7_3:+46807597 None:intergenic
CACCGATGTGGCGAAGATAA+AGG 0.432671 7_3:-46803004 Msa1106680:CDS
AGTTCCAAATGTTCAAGAAA+TGG 0.434264 7_3:-46807595 Msa1106680:CDS
AATCAGAAACAAAGGAAATT+GGG 0.436978 7_3:-46803584 Msa1106680:intron
GTCATCATCTTGAATAAGTA+AGG 0.453414 7_3:+46803621 None:intergenic
TGAACTTCCAATGGAAGAGA+AGG 0.457590 7_3:-46804350 Msa1106680:CDS
CATCTTGAATAAGTAAGGTA+AGG 0.463041 7_3:+46803626 None:intergenic
CTCAAACCCAATACTTGCTC+AGG 0.481452 7_3:+46803670 None:intergenic
AGCTGTGCAAAATCAATGAT+AGG 0.484427 7_3:+46807477 None:intergenic
ACATTTGGAACTGGTAAAGA+TGG 0.488461 7_3:+46807606 None:intergenic
TGAAGTATGGAGATTATTTG+AGG 0.488688 7_3:-46803062 Msa1106680:CDS
TATGTCTATTATCATGGGGT+TGG 0.489175 7_3:-46803770 Msa1106680:CDS
ATTCAAGATGATGACGTGCT+TGG 0.494689 7_3:-46803613 Msa1106680:CDS
TGAAGCTTCCTATACCGGTT+GGG 0.495476 7_3:+46804220 None:intergenic
AAGACCTTATACAGAGAATG+AGG 0.495673 7_3:-46804393 Msa1106680:CDS
AGCATCTATCATATGATCAA+AGG 0.498371 7_3:+46803110 None:intergenic
CAAACGACATACAAGGATAT+GGG 0.511800 7_3:-46804309 Msa1106680:CDS
TGAGAGTGCATGCAAGGAGT+GGG 0.521888 7_3:-46807421 Msa1106680:CDS
GCTCAGGATTGTTGCAAGGA+GGG 0.526591 7_3:+46803686 None:intergenic
TGACAAATCAGAACAAAAGA+AGG 0.528133 7_3:-46803182 Msa1106680:CDS
GCATCTATCATATGATCAAA+GGG 0.540412 7_3:+46803111 None:intergenic
GCAAAATTATGTTGTTTCTG+AGG 0.542987 7_3:-46804287 Msa1106680:CDS
ACAAGTGAAGTGAGACGAGT+TGG 0.566812 7_3:-46803811 Msa1106680:CDS
ATGCTCCCAAACGACATACA+AGG 0.573331 7_3:-46804316 Msa1106680:CDS
TTGAGAGTGCATGCAAGGAG+TGG 0.589476 7_3:-46807422 Msa1106680:CDS
AGGGTGGTTGTGTCAGAGTG+TGG 0.589500 7_3:+46803646 None:intergenic
TTCCTTTATCTTCGCCACAT+CGG 0.598332 7_3:+46803002 None:intergenic
TGAAGTGAGACGAGTTGGTG+AGG 0.603842 7_3:-46803806 Msa1106680:CDS
ATCTTGAATAAGTAAGGTAA+GGG 0.604867 7_3:+46803627 None:intergenic
TCAACTTCAACGTCATCTCG+AGG 0.606004 7_3:+46803135 None:intergenic
TTGAATAAGTAAGGTAAGGG+TGG 0.611873 7_3:+46803630 None:intergenic
ACTTGCTCAGGATTGTTGCA+AGG 0.615788 7_3:+46803682 None:intergenic
GGATTAGAAATCAGAAACAA+AGG 0.620128 7_3:-46803592 Msa1106680:CDS
GAAACTTGAGAGTGCATGCA+AGG 0.627771 7_3:-46807427 Msa1106680:CDS
TGCTCAGGATTGTTGCAAGG+AGG 0.630627 7_3:+46803685 None:intergenic
GAGAGTGCATGCAAGGAGTG+GGG 0.631207 7_3:-46807420 Msa1106680:CDS
TGTGAGCAGATATTGAGTAA+TGG 0.633181 7_3:-46803234 Msa1106680:intron
AGACCTTATACAGAGAATGA+GGG 0.635205 7_3:-46804392 Msa1106680:CDS
CAACTTCAACGTCATCTCGA+GGG 0.638366 7_3:+46803136 None:intergenic
TCTTTGCAGATGGTGAATCA+TGG 0.640862 7_3:-46804424 Msa1106680:intron
CTAATGTAGAGAGATAATAG+AGG 0.653578 7_3:-46803839 Msa1106680:intron
GGAATCTCAGAAGAAAGTTG+AGG 0.659853 7_3:+46807498 None:intergenic
AAGTTCCAACAAAATATGTG+AGG 0.701291 7_3:-46807554 Msa1106680:CDS
ACAGCTTTCAAATGGGAACG+TGG 0.713673 7_3:-46807460 Msa1106680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACAATGAATATAATT+AGG - chr7_3:46803417-46803436 Msa1106680:intron 10.0%
!! AAAAACAATGAATATAATTA+GGG - chr7_3:46803418-46803437 Msa1106680:intron 10.0%
!!! AAAATATAATTGTAGTTTTA+TGG - chr7_3:46804007-46804026 Msa1106680:intron 10.0%
!!! TTCTAGATATTTTTATTTTT+AGG + chr7_3:46805699-46805718 None:intergenic 10.0%
!! TAAAAATAAAAATATCTAGA+AGG - chr7_3:46805698-46805717 Msa1106680:intron 10.0%
!! AAAAATTTCAATTAAAAAAC+GGG + chr7_3:46805847-46805866 None:intergenic 10.0%
!! CAAAAATTTCAATTAAAAAA+CGG + chr7_3:46805848-46805867 None:intergenic 10.0%
!!! TTCTCTTTTTTTTTTTTTTT+TGG + chr7_3:46805951-46805970 None:intergenic 10.0%
!! TAAAAATAGACATATTAAAG+AGG + chr7_3:46803307-46803326 None:intergenic 15.0%
!!! TTTTTATACTCTGATATAAA+TGG + chr7_3:46803910-46803929 None:intergenic 15.0%
!! GTTGAAAAAACAATTAATTA+TGG + chr7_3:46803939-46803958 None:intergenic 15.0%
!! TAAAAATACAATAAACAAGT+AGG - chr7_3:46804253-46804272 Msa1106680:CDS 15.0%
!! AAAAATACAATAAACAAGTA+GGG - chr7_3:46804254-46804273 Msa1106680:CDS 15.0%
!!! AATTTTTTGTGTATAATTCA+GGG + chr7_3:46804311-46804330 None:intergenic 15.0%
!!! AGTTTATTTGTTCAAATTTT+TGG - chr7_3:46804540-46804559 Msa1106680:intron 15.0%
!! AAAAAACGTTAAAAAAAAGA+AGG + chr7_3:46805287-46805306 None:intergenic 15.0%
!!! AATTCATTACTTTTCTTTAA+TGG + chr7_3:46805655-46805674 None:intergenic 15.0%
!! ATTAAAGAAAAGTAATGAAT+TGG - chr7_3:46805654-46805673 Msa1106680:intron 15.0%
!! TTAAAGAAAAGTAATGAATT+GGG - chr7_3:46805655-46805674 Msa1106680:intron 15.0%
!!! TAGATATTTTTATTTTTAGG+TGG + chr7_3:46805696-46805715 None:intergenic 15.0%
!! AAAATTAATAAGTTCCAAAT+CGG - chr7_3:46806006-46806025 Msa1106680:intron 15.0%
!! TATTTAATTCTAGATTCAAA+AGG + chr7_3:46806476-46806495 None:intergenic 15.0%
!!! TCTAGAATTAAATATGATTT+TGG - chr7_3:46806482-46806501 Msa1106680:intron 15.0%
!! AGAATATATTATATCAGTGA+TGG - chr7_3:46803460-46803479 Msa1106680:intron 20.0%
!!! ATCCAGAAATTTTAATAACT+GGG - chr7_3:46803483-46803502 Msa1106680:intron 20.0%
!! CAAAAATAAAATCAAATGAG+TGG + chr7_3:46803558-46803577 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr7_3:46803644-46803663 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr7_3:46803645-46803664 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr7_3:46803646-46803665 None:intergenic 20.0%
!! AAGAAATATGAAAAATGCAA+AGG - chr7_3:46803769-46803788 Msa1106680:CDS 20.0%
!! AGAAATATGAAAAATGCAAA+GGG - chr7_3:46803770-46803789 Msa1106680:CDS 20.0%
!!! TTTTTTTGTAGTGTTATGAA+TGG - chr7_3:46804204-46804223 Msa1106680:intron 20.0%
!!! CAATTTTTTGTGTATAATTC+AGG + chr7_3:46804312-46804331 None:intergenic 20.0%
!! TAAGAATAACAGAAAAAACT+AGG - chr7_3:46804434-46804453 Msa1106680:intron 20.0%
!! AAGAATAACAGAAAAAACTA+GGG - chr7_3:46804435-46804454 Msa1106680:intron 20.0%
!! TTAAGAAAGTTCAATATAGA+AGG - chr7_3:46804476-46804495 Msa1106680:intron 20.0%
!! TAAGAAAGTTCAATATAGAA+GGG - chr7_3:46804477-46804496 Msa1106680:intron 20.0%
!! AATAAAAAGAAAAGAACATG+GGG + chr7_3:46805250-46805269 None:intergenic 20.0%
!! GAATAAAAAGAAAAGAACAT+GGG + chr7_3:46805251-46805270 None:intergenic 20.0%
!! AGAATAAAAAGAAAAGAACA+TGG + chr7_3:46805252-46805271 None:intergenic 20.0%
!! ATCTTAAATAAAGTAAGCTT+AGG - chr7_3:46805350-46805369 Msa1106680:intron 20.0%
!!! ACCATTTTTATTGATTTGTA+GGG + chr7_3:46805820-46805839 None:intergenic 20.0%
!!! TACCATTTTTATTGATTTGT+AGG + chr7_3:46805821-46805840 None:intergenic 20.0%
!! AAAATGTGAGTGAAAAATAA+AGG + chr7_3:46805873-46805892 None:intergenic 20.0%
!! AAGTATGAAGTTTAAACTAA+TGG + chr7_3:46806080-46806099 None:intergenic 20.0%
!!! TTATTTTTGATAAGCAATAG+TGG + chr7_3:46806694-46806713 None:intergenic 20.0%
!!! AAGTTTTATGTCTATTATCA+TGG - chr7_3:46806850-46806869 Msa1106680:intron 20.0%
!!! AGTTTTATGTCTATTATCAT+GGG - chr7_3:46806851-46806870 Msa1106680:intron 20.0%
!! CTAAAATATCTTTTTGTGCA+TGG - chr7_3:46803339-46803358 Msa1106680:intron 25.0%
!!! GATCCAGAAATTTTAATAAC+TGG - chr7_3:46803482-46803501 Msa1106680:intron 25.0%
!!! TCCAGAAATTTTAATAACTG+GGG - chr7_3:46803484-46803503 Msa1106680:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG + chr7_3:46803596-46803615 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr7_3:46803597-46803616 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr7_3:46803634-46803653 None:intergenic 25.0%
! CATACAAACAAAGAACAATT+TGG - chr7_3:46803696-46803715 Msa1106680:CDS 25.0%
! GAAATATGAAAAATGCAAAG+GGG - chr7_3:46803771-46803790 Msa1106680:CDS 25.0%
! AAATATGAAAAATGCAAAGG+GGG - chr7_3:46803772-46803791 Msa1106680:CDS 25.0%
!!! TGTTCAAATTTTTGGACAAT+AGG - chr7_3:46804548-46804567 Msa1106680:intron 25.0%
! TACAATGCATAATATATGCA+AGG - chr7_3:46804682-46804701 Msa1106680:intron 25.0%
! TCAGAACAAAGAAATAAGAA+AGG - chr7_3:46804957-46804976 Msa1106680:intron 25.0%
! AACAAAGAAATAAGAAAGGA+AGG - chr7_3:46804961-46804980 Msa1106680:intron 25.0%
! TTTGTAATCTTGTATCTAGT+TGG - chr7_3:46805046-46805065 Msa1106680:intron 25.0%
! TTACCCATTTCTTAAAAGAT+GGG - chr7_3:46805194-46805213 Msa1106680:intron 25.0%
!! TCGAATCATCATATTTTATC+CGG - chr7_3:46805424-46805443 Msa1106680:intron 25.0%
! CACATGTATAAACATATAAC+CGG + chr7_3:46805446-46805465 None:intergenic 25.0%
! ATGTTTATACATGTGTTGTA+AGG - chr7_3:46805451-46805470 Msa1106680:intron 25.0%
!! ATGACTGAATCGATTTAAAT+CGG + chr7_3:46805499-46805518 None:intergenic 25.0%
!!! ATACTAGTTGGATTTTTTTG+TGG + chr7_3:46805621-46805640 None:intergenic 25.0%
! ATCCAACTAGTATCAAAAAT+AGG - chr7_3:46805628-46805647 Msa1106680:intron 25.0%
!!! CCATTTTTATTGATTTGTAG+GGG + chr7_3:46805819-46805838 None:intergenic 25.0%
! GTTTAAACTTCATACTTATG+TGG - chr7_3:46806083-46806102 Msa1106680:intron 25.0%
! TCAATATATATCTTTGCAGA+TGG - chr7_3:46806192-46806211 Msa1106680:intron 25.0%
!!! AAATATGATTTTGGTCTCTA+TGG - chr7_3:46806491-46806510 Msa1106680:intron 25.0%
!!! AGTGGTTTATGTTAGTTTTT+AGG + chr7_3:46806676-46806695 None:intergenic 25.0%
!! GTTTTATGTCTATTATCATG+GGG - chr7_3:46806852-46806871 Msa1106680:intron 25.0%
! CTGCATAAAGAATTAATTCA+AGG - chr7_3:46806899-46806918 Msa1106680:intron 25.0%
! ATCTTGAATAAGTAAGGTAA+GGG + chr7_3:46807002-46807021 None:intergenic 25.0%
! AAATCAGAAACAAAGGAAAT+TGG - chr7_3:46807041-46807060 Msa1106680:intron 25.0%
! AATCAGAAACAAAGGAAATT+GGG - chr7_3:46807042-46807061 Msa1106680:intron 25.0%
!! TTAATTAAGTCACTTTGTGT+TGG + chr7_3:46807337-46807356 None:intergenic 25.0%
! ATTTCTTGAACATTTGGAAC+TGG + chr7_3:46803032-46803051 None:intergenic 30.0%
AGTTCCAAATGTTCAAGAAA+TGG - chr7_3:46803031-46803050 Msa1106680:CDS 30.0%
TTCACCATTTCTTGAACATT+TGG + chr7_3:46803038-46803057 None:intergenic 30.0%
! TATTTTGTTGGAACTTGCAA+AGG + chr7_3:46803068-46803087 None:intergenic 30.0%
AAGTTCCAACAAAATATGTG+AGG - chr7_3:46803072-46803091 Msa1106680:CDS 30.0%
! TCATTCCTCACATATTTTGT+TGG + chr7_3:46803080-46803099 None:intergenic 30.0%
! ATTTTGCACAGCTTTCAAAT+GGG - chr7_3:46803159-46803178 Msa1106680:CDS 30.0%
! AAATATCTTTTTGTGCATGG+AGG - chr7_3:46803342-46803361 Msa1106680:intron 30.0%
ACCCCAGTTATTAAAATTTC+TGG + chr7_3:46803488-46803507 None:intergenic 30.0%
CAAATGAGTGGTTACATTAA+GGG + chr7_3:46803546-46803565 None:intergenic 30.0%
TCAAATGAGTGGTTACATTA+AGG + chr7_3:46803547-46803566 None:intergenic 30.0%
CATCTAGTAATTTGAAAAGG+GGG + chr7_3:46803594-46803613 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG + chr7_3:46803595-46803614 None:intergenic 30.0%
AATATGAAAAATGCAAAGGG+GGG - chr7_3:46803773-46803792 Msa1106680:CDS 30.0%
TAGAACACTCATAACTCATT+AGG - chr7_3:46804162-46804181 Msa1106680:intron 30.0%
TTCTTAATTTCCAACAAAGC+TGG + chr7_3:46804463-46804482 None:intergenic 30.0%
CATAATATATGCAAGGTCTA+AGG - chr7_3:46804689-46804708 Msa1106680:intron 30.0%
GAATGAATCAAGTATTAACC+CGG + chr7_3:46804905-46804924 None:intergenic 30.0%
AAGAAATAAGAAAGGAAGGT+AGG - chr7_3:46804965-46804984 Msa1106680:intron 30.0%
TGTTGTGAATGAATGATGTT+TGG - chr7_3:46805132-46805151 Msa1106680:intron 30.0%
AATGAATGATGTTTGGTATG+CGG - chr7_3:46805139-46805158 Msa1106680:intron 30.0%
CTGTAAGAGTAGTGAAATTA+GGG - chr7_3:46805162-46805181 Msa1106680:intron 30.0%
!! CATCTTTTAAGAAATGGGTA+AGG + chr7_3:46805195-46805214 None:intergenic 30.0%
CTTACCCATTTCTTAAAAGA+TGG - chr7_3:46805193-46805212 Msa1106680:intron 30.0%
!! AAGCCCATCTTTTAAGAAAT+GGG + chr7_3:46805200-46805219 None:intergenic 30.0%
! ATTTCTTAAAAGATGGGCTT+CGG - chr7_3:46805200-46805219 Msa1106680:intron 30.0%
!!! GACCTATTTTTGATACTAGT+TGG + chr7_3:46805633-46805652 None:intergenic 30.0%
! AATATCTAGAAGGTACAAGT+AGG - chr7_3:46805708-46805727 Msa1106680:intron 30.0%
!!! CTTTTTGAGTTTCTCTTCAA+TGG + chr7_3:46805748-46805767 None:intergenic 30.0%
CCCCTACAAATCAATAAAAA+TGG - chr7_3:46805816-46805835 Msa1106680:intron 30.0%
ATTAATAAGTTCCAAATCGG+AGG - chr7_3:46806009-46806028 Msa1106680:intron 30.0%
TTAATAAGTTCCAAATCGGA+GGG - chr7_3:46806010-46806029 Msa1106680:intron 30.0%
TACTATATGTCACAATCAAG+TGG - chr7_3:46806158-46806177 Msa1106680:intron 30.0%
!!! TGAGTTTTTTGAACTTCCAA+TGG - chr7_3:46806267-46806286 Msa1106680:intron 30.0%
!! GCAAAATTATGTTGTTTCTG+AGG - chr7_3:46806339-46806358 Msa1106680:intron 30.0%
! TTTTGATCATTTATCCCAAC+CGG - chr7_3:46806392-46806411 Msa1106680:intron 30.0%
AAAATTGAAGCTTCCTATAC+CGG + chr7_3:46806414-46806433 None:intergenic 30.0%
TGCTTATAAATGCAATCGAA+TGG + chr7_3:46806543-46806562 None:intergenic 30.0%
AATGAATCTGAAAAAGTGAC+CGG - chr7_3:46806635-46806654 Msa1106680:intron 30.0%
CTAATGTAGAGAGATAATAG+AGG - chr7_3:46806787-46806806 Msa1106680:intron 30.0%
CATCTTGAATAAGTAAGGTA+AGG + chr7_3:46807003-46807022 None:intergenic 30.0%
GTCATCATCTTGAATAAGTA+AGG + chr7_3:46807008-46807027 None:intergenic 30.0%
GGATTAGAAATCAGAAACAA+AGG - chr7_3:46807034-46807053 Msa1106680:intron 30.0%
!! ATAACAAGAGCATCTGATAT+CGG + chr7_3:46807079-46807098 None:intergenic 30.0%
!!! TTTTTTTGTCTTAACCCCTT+AGG - chr7_3:46807126-46807145 Msa1106680:intron 30.0%
GTTAGAAACTACATCAAACT+TGG - chr7_3:46807216-46807235 Msa1106680:intron 30.0%
CATTTAAGAATGAATCCGTT+TGG + chr7_3:46807248-46807267 None:intergenic 30.0%
ATATCTGCTCACATTCAAAA+AGG + chr7_3:46807385-46807404 None:intergenic 30.0%
TGACAAATCAGAACAAAAGA+AGG - chr7_3:46807444-46807463 Msa1106680:CDS 30.0%
GCATCTATCATATGATCAAA+GGG + chr7_3:46807518-46807537 None:intergenic 30.0%
AGCATCTATCATATGATCAA+AGG + chr7_3:46807519-46807538 None:intergenic 30.0%
TGAAGTATGGAGATTATTTG+AGG - chr7_3:46807564-46807583 Msa1106680:CDS 30.0%
GCATTCCTTAAAGAGAAAAA+TGG - chr7_3:46807586-46807605 Msa1106680:CDS 30.0%
GGTAAAGATGGAGCAAAAAT+GGG + chr7_3:46803011-46803030 None:intergenic 35.0%
TGGTAAAGATGGAGCAAAAA+TGG + chr7_3:46803012-46803031 None:intergenic 35.0%
! ACATTTGGAACTGGTAAAGA+TGG + chr7_3:46803023-46803042 None:intergenic 35.0%
TGTGAGGAATGAAGAAGAAA+TGG - chr7_3:46803088-46803107 Msa1106680:CDS 35.0%
AGCTGTGCAAAATCAATGAT+AGG + chr7_3:46803152-46803171 None:intergenic 35.0%
! GATTTTGCACAGCTTTCAAA+TGG - chr7_3:46803158-46803177 Msa1106680:CDS 35.0%
TGAAAAGGGGGTTACATTTA+GGG + chr7_3:46803582-46803601 None:intergenic 35.0%
TTGAAAAGGGGGTTACATTT+AGG + chr7_3:46803583-46803602 None:intergenic 35.0%
AAAAGCTCTATGACTAACGT+TGG + chr7_3:46803964-46803983 None:intergenic 35.0%
!! ACGATATGCTCTAAGACAAT+TGG - chr7_3:46804038-46804057 Msa1106680:intron 35.0%
GTTCAATATAGAAGGGAACA+TGG - chr7_3:46804484-46804503 Msa1106680:intron 35.0%
GATAACAAAGGTGGTTAAAG+TGG - chr7_3:46804506-46804525 Msa1106680:intron 35.0%
! CTAGTTGATGTTCTTAAGTG+TGG + chr7_3:46804577-46804596 None:intergenic 35.0%
CTAATATGCCACACTCTAAA+CGG - chr7_3:46804601-46804620 Msa1106680:intron 35.0%
!!! GCCACCATAGTTTTTAAAAC+CGG - chr7_3:46804723-46804742 Msa1106680:intron 35.0%
!!! TGAGCCGGTTTTAAAAACTA+TGG + chr7_3:46804730-46804749 None:intergenic 35.0%
GCTGTAAGAGTAGTGAAATT+AGG - chr7_3:46805161-46805180 Msa1106680:intron 35.0%
!! GAAGCCCATCTTTTAAGAAA+TGG + chr7_3:46805201-46805220 None:intergenic 35.0%
! TTTCTTAAAAGATGGGCTTC+GGG - chr7_3:46805201-46805220 Msa1106680:intron 35.0%
AACATGGGGCTTGAATAAAT+GGG + chr7_3:46805236-46805255 None:intergenic 35.0%
TCGATTTAAATCGGATGACT+CGG + chr7_3:46805490-46805509 None:intergenic 35.0%
!!! CATAGTTTTAAAACTCGGCT+CGG + chr7_3:46805591-46805610 None:intergenic 35.0%
!!! GCGAGCATAGTTTTAAAACT+CGG + chr7_3:46805596-46805615 None:intergenic 35.0%
!!! CTAGTTGGATTTTTTTGTGG+TGG + chr7_3:46805618-46805637 None:intergenic 35.0%
ACTTGGATAGTACATAGTAG+GGG + chr7_3:46805918-46805937 None:intergenic 35.0%
GACTTGGATAGTACATAGTA+GGG + chr7_3:46805919-46805938 None:intergenic 35.0%
! TGACTTGGATAGTACATAGT+AGG + chr7_3:46805920-46805939 None:intergenic 35.0%
GAGAAAGAAAGAATCTCGTT+TGG - chr7_3:46805966-46805985 Msa1106680:intron 35.0%
! TAATTTTCAACCTCTCCTTC+AGG + chr7_3:46805993-46806012 None:intergenic 35.0%
AAGACCTTATACAGAGAATG+AGG - chr7_3:46806233-46806252 Msa1106680:intron 35.0%
AGACCTTATACAGAGAATGA+GGG - chr7_3:46806234-46806253 Msa1106680:intron 35.0%
! TACTTTTCCTTCTCTTCCAT+TGG + chr7_3:46806286-46806305 None:intergenic 35.0%
! CATATCCTTGTATGTCGTTT+GGG + chr7_3:46806318-46806337 None:intergenic 35.0%
CAAACGACATACAAGGATAT+GGG - chr7_3:46806317-46806336 Msa1106680:intron 35.0%
! GGTATAGGAAGCTTCAATTT+TGG - chr7_3:46806413-46806432 Msa1106680:intron 35.0%
ATGAATCTGAAAAAGTGACC+GGG - chr7_3:46806636-46806655 Msa1106680:intron 35.0%
TATGTCTATTATCATGGGGT+TGG - chr7_3:46806856-46806875 Msa1106680:intron 35.0%
AACAATCCTGAGCAAGTATT+GGG - chr7_3:46806950-46806969 Msa1106680:intron 35.0%
TTGAATAAGTAAGGTAAGGG+TGG + chr7_3:46806999-46807018 None:intergenic 35.0%
AAACAAAGGAAATTGGGTAC+CGG - chr7_3:46807048-46807067 Msa1106680:intron 35.0%
! GATGCTCTTGTTATCAATGT+TGG - chr7_3:46807085-46807104 Msa1106680:intron 35.0%
CAATGTTGGAGATGTTATAG+AGG - chr7_3:46807099-46807118 Msa1106680:intron 35.0%
!!! TTTTTTGCCGAAAACCTAAG+GGG + chr7_3:46807143-46807162 None:intergenic 35.0%
!!! CTTTTTTGCCGAAAACCTAA+GGG + chr7_3:46807144-46807163 None:intergenic 35.0%
! CTTAGGTTTTCGGCAAAAAA+GGG - chr7_3:46807143-46807162 Msa1106680:intron 35.0%
! TAATCTAGGGTTCGAATGAA+AGG - chr7_3:46807172-46807191 Msa1106680:intron 35.0%
CAAACTTGGATACTTCCAAA+CGG - chr7_3:46807230-46807249 Msa1106680:intron 35.0%
TGTGAGCAGATATTGAGTAA+TGG - chr7_3:46807392-46807411 Msa1106680:intron 35.0%
! TCACTTTCTGGTACATCTTA+GGG + chr7_3:46807547-46807566 None:intergenic 35.0%
! TTCACTTTCTGGTACATCTT+AGG + chr7_3:46807548-46807567 None:intergenic 35.0%
ATGTACCAGAAAGTGAAGTA+TGG - chr7_3:46807551-46807570 Msa1106680:CDS 35.0%
AATCTCCATACTTCACTTTC+TGG + chr7_3:46807559-46807578 None:intergenic 35.0%
!! TCGCTCCATTTTTCTCTTTA+AGG + chr7_3:46807594-46807613 None:intergenic 35.0%
GGAATCTCAGAAGAAAGTTG+AGG + chr7_3:46803131-46803150 None:intergenic 40.0%
TGAGTGGTTACATTAAGGGA+CGG + chr7_3:46803542-46803561 None:intergenic 40.0%
GAAGGGAACATGGATAACAA+AGG - chr7_3:46804494-46804513 Msa1106680:intron 40.0%
! TCATATAGCCGTTTAGAGTG+TGG + chr7_3:46804612-46804631 None:intergenic 40.0%
!!! GCCGGTTTTAAAAACTATGG+TGG + chr7_3:46804727-46804746 None:intergenic 40.0%
!!! TTTTTAAAACCGGCTCAGAC+CGG - chr7_3:46804733-46804752 Msa1106680:intron 40.0%
! GCGGTTTTTATAAACCAGAC+CGG - chr7_3:46804883-46804902 Msa1106680:intron 40.0%
! CGGTTTTTATAAACCAGACC+GGG - chr7_3:46804884-46804903 Msa1106680:intron 40.0%
AATCAAGTATTAACCCGGTC+TGG + chr7_3:46804900-46804919 None:intergenic 40.0%
TCTCACGATTGCTAAGAAGA+TGG - chr7_3:46805087-46805106 Msa1106680:intron 40.0%
GAACATGGGGCTTGAATAAA+TGG + chr7_3:46805237-46805256 None:intergenic 40.0%
GGTTCATTGGTCAAACCATT+GGG + chr7_3:46805538-46805557 None:intergenic 40.0%
TGGTTCATTGGTCAAACCAT+TGG + chr7_3:46805539-46805558 None:intergenic 40.0%
!! TCATTGAGTCACTGGTTCAT+TGG + chr7_3:46805551-46805570 None:intergenic 40.0%
!!! TTTTTGGCTCGTTTGTGACT+TGG + chr7_3:46805935-46805954 None:intergenic 40.0%
TATCATTGTTCCCTCCGATT+TGG + chr7_3:46806023-46806042 None:intergenic 40.0%
TCTTTGCAGATGGTGAATCA+TGG - chr7_3:46806202-46806221 Msa1106680:intron 40.0%
CATCCCTCATTCTCTGTATA+AGG + chr7_3:46806240-46806259 None:intergenic 40.0%
TGAACTTCCAATGGAAGAGA+AGG - chr7_3:46806276-46806295 Msa1106680:intron 40.0%
CCATATCCTTGTATGTCGTT+TGG + chr7_3:46806319-46806338 None:intergenic 40.0%
CCAAACGACATACAAGGATA+TGG - chr7_3:46806316-46806335 Msa1106680:intron 40.0%
TCATTTATCCCAACCGGTAT+AGG - chr7_3:46806398-46806417 Msa1106680:intron 40.0%
! TTGAATCCACGAGAGGTTTT+TGG + chr7_3:46806439-46806458 None:intergenic 40.0%
TGCAATCGAATGGAGTATAG+AGG + chr7_3:46806533-46806552 None:intergenic 40.0%
TGAATCTGAAAAAGTGACCG+GGG - chr7_3:46806637-46806656 Msa1106680:intron 40.0%
CAACAATCCTGAGCAAGTAT+TGG - chr7_3:46806949-46806968 Msa1106680:intron 40.0%
! ATTCAAGATGATGACGTGCT+TGG - chr7_3:46807013-46807032 Msa1106680:intron 40.0%
!! GCATCTGATATCGGTTTAAC+CGG + chr7_3:46807070-46807089 None:intergenic 40.0%
! GTCTTAACCCCTTAGGTTTT+CGG - chr7_3:46807133-46807152 Msa1106680:intron 40.0%
!!! CCTTTTTTGCCGAAAACCTA+AGG + chr7_3:46807145-46807164 None:intergenic 40.0%
! CCTTAGGTTTTCGGCAAAAA+AGG - chr7_3:46807142-46807161 Msa1106680:intron 40.0%
! TTTTCGGCAAAAAAGGGTCA+GGG - chr7_3:46807149-46807168 Msa1106680:intron 40.0%
AAAAAGGGTCAGGGTAATCT+AGG - chr7_3:46807158-46807177 Msa1106680:intron 40.0%
AAAAGGGTCAGGGTAATCTA+GGG - chr7_3:46807159-46807178 Msa1106680:intron 40.0%
!! ACTTTGTGTTGGTGCTACAT+AGG + chr7_3:46807326-46807345 None:intergenic 40.0%
TTCCTTTATCTTCGCCACAT+CGG + chr7_3:46807627-46807646 None:intergenic 40.0%
ACAGCTTTCAAATGGGAACG+TGG - chr7_3:46803166-46803185 Msa1106680:CDS 45.0%
! GAAACTTGAGAGTGCATGCA+AGG - chr7_3:46803199-46803218 Msa1106680:CDS 45.0%
TGGTTACATTAAGGGACGGA+GGG + chr7_3:46803538-46803557 None:intergenic 45.0%
TGCAAAGGGGGGTTACATTA+AGG - chr7_3:46803784-46803803 Msa1106680:CDS 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr7_3:46803785-46803804 Msa1106680:CDS 45.0%
AGCTCTATGACTAACGTTGG+TGG + chr7_3:46803961-46803980 None:intergenic 45.0%
TTCAGGGACGAATTCAACGT+GGG + chr7_3:46804295-46804314 None:intergenic 45.0%
ATTCAGGGACGAATTCAACG+TGG + chr7_3:46804296-46804315 None:intergenic 45.0%
! AACTAGGGATCCAGCTTTGT+TGG - chr7_3:46804450-46804469 Msa1106680:intron 45.0%
GGGAACATGGATAACAAAGG+TGG - chr7_3:46804497-46804516 Msa1106680:intron 45.0%
TCACGAGGACTGATACTAGT+TGG + chr7_3:46804643-46804662 None:intergenic 45.0%
CGGCTAAAACCGGTAAAAAC+CGG - chr7_3:46804853-46804872 Msa1106680:intron 45.0%
! GGATGACTCGGAGTATAACT+CGG + chr7_3:46805478-46805497 None:intergenic 45.0%
GTACAAGTAGGCAAACGTCT+CGG - chr7_3:46805720-46805739 Msa1106680:intron 45.0%
TACAAGTAGGCAAACGTCTC+GGG - chr7_3:46805721-46805740 Msa1106680:intron 45.0%
! AGCAAAAGTGTAGGGGTGTA+GGG + chr7_3:46805792-46805811 None:intergenic 45.0%
! AAGCAAAAGTGTAGGGGTGT+AGG + chr7_3:46805793-46805812 None:intergenic 45.0%
! GGGTGAAAGCAAAAGTGTAG+GGG + chr7_3:46805799-46805818 None:intergenic 45.0%
! GGGGTGAAAGCAAAAGTGTA+GGG + chr7_3:46805800-46805819 None:intergenic 45.0%
! AGGGGTGAAAGCAAAAGTGT+AGG + chr7_3:46805801-46805820 None:intergenic 45.0%
! GGGTGAACGTAAAAGTGTAG+GGG + chr7_3:46805898-46805917 None:intergenic 45.0%
! GGGGTGAACGTAAAAGTGTA+GGG + chr7_3:46805899-46805918 None:intergenic 45.0%
! AGGGGTGAACGTAAAAGTGT+AGG + chr7_3:46805900-46805919 None:intergenic 45.0%
AGAATCTCGTTTGGACCTGA+AGG - chr7_3:46805975-46805994 Msa1106680:intron 45.0%
ATGCTCCCAAACGACATACA+AGG - chr7_3:46806310-46806329 Msa1106680:intron 45.0%
CTGAGGAGCAAACACTTGAT+TGG - chr7_3:46806356-46806375 Msa1106680:intron 45.0%
! TGAAGCTTCCTATACCGGTT+GGG + chr7_3:46806409-46806428 None:intergenic 45.0%
TTGAAGCTTCCTATACCGGT+TGG + chr7_3:46806410-46806429 None:intergenic 45.0%
! TTTTGGCCAAAAACCTCTCG+TGG - chr7_3:46806430-46806449 Msa1106680:intron 45.0%
GAATCTGAAAAAGTGACCGG+GGG - chr7_3:46806638-46806657 Msa1106680:intron 45.0%
AATCTGAAAAAGTGACCGGG+GGG - chr7_3:46806639-46806658 Msa1106680:intron 45.0%
ACAAGTGAAGTGAGACGAGT+TGG - chr7_3:46806815-46806834 Msa1106680:intron 45.0%
ACTTGCTCAGGATTGTTGCA+AGG + chr7_3:46806947-46806966 None:intergenic 45.0%
CTCAAACCCAATACTTGCTC+AGG + chr7_3:46806959-46806978 None:intergenic 45.0%
! GTTTTCGGCAAAAAAGGGTC+AGG - chr7_3:46807148-46807167 Msa1106680:intron 45.0%
CAACTTCAACGTCATCTCGA+GGG + chr7_3:46807493-46807512 None:intergenic 45.0%
TCAACTTCAACGTCATCTCG+AGG + chr7_3:46807494-46807513 None:intergenic 45.0%
! TTGAGAGTGCATGCAAGGAG+TGG - chr7_3:46803204-46803223 Msa1106680:CDS 50.0%
! TGAGAGTGCATGCAAGGAGT+GGG - chr7_3:46803205-46803224 Msa1106680:CDS 50.0%
CAAGGAGTGGGGTTTCTTTC+AGG - chr7_3:46803217-46803236 Msa1106680:CDS 50.0%
GTGGTTACATTAAGGGACGG+AGG + chr7_3:46803539-46803558 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr7_3:46803789-46803808 Msa1106680:CDS 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr7_3:46803793-46803812 Msa1106680:CDS 50.0%
AATTCAACGTGGGGGCAATG+GGG + chr7_3:46804285-46804304 None:intergenic 50.0%
GAATTCAACGTGGGGGCAAT+GGG + chr7_3:46804286-46804305 None:intergenic 50.0%
TCAGGGACGAATTCAACGTG+GGG + chr7_3:46804294-46804313 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG + chr7_3:46804658-46804677 None:intergenic 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - chr7_3:46804655-46804674 Msa1106680:intron 50.0%
GATCGGGCATGTTGTTGAAC+CGG - chr7_3:46804813-46804832 Msa1106680:intron 50.0%
TATAAAAACCGCCGAGTCGC+CGG + chr7_3:46804875-46804894 None:intergenic 50.0%
CAGTTCAACCAGTGACCCAA+TGG - chr7_3:46805520-46805539 Msa1106680:intron 50.0%
TGGTCAAACCATTGGGTCAC+TGG + chr7_3:46805531-46805550 None:intergenic 50.0%
CGGTAAGGTCATTGAGTCAC+TGG + chr7_3:46805559-46805578 None:intergenic 50.0%
CAATGACCTTACCGAGTCGA+TGG - chr7_3:46805565-46805584 Msa1106680:intron 50.0%
TGCGTACTTGAATCCACGAG+AGG + chr7_3:46806446-46806465 None:intergenic 50.0%
ATCTGAAAAAGTGACCGGGG+GGG - chr7_3:46806640-46806659 Msa1106680:intron 50.0%
!! TGAAGTGAGACGAGTTGGTG+AGG - chr7_3:46806820-46806839 Msa1106680:intron 50.0%
GCTCAGGATTGTTGCAAGGA+GGG + chr7_3:46806943-46806962 None:intergenic 50.0%
TGCTCAGGATTGTTGCAAGG+AGG + chr7_3:46806944-46806963 None:intergenic 50.0%
GCGAAAAACACACACCGATG+TGG - chr7_3:46807610-46807629 Msa1106680:CDS 50.0%
CACCGATGTGGCGAAGATAA+AGG - chr7_3:46807622-46807641 Msa1106680:CDS 50.0%
! GAGAGTGCATGCAAGGAGTG+GGG - chr7_3:46803206-46803225 Msa1106680:CDS 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr7_3:46803792-46803811 Msa1106680:CDS 55.0%
CGAATTCAACGTGGGGGCAA+TGG + chr7_3:46804287-46804306 None:intergenic 55.0%
CAGGGACGAATTCAACGTGG+GGG + chr7_3:46804293-46804312 None:intergenic 55.0%
! GTCTGGTTCGAGCTGTCTTG+CGG - chr7_3:46804791-46804810 Msa1106680:intron 55.0%
GTTCGAGCTGTCTTGCGGAT+CGG - chr7_3:46804796-46804815 Msa1106680:intron 55.0%
TTCGAGCTGTCTTGCGGATC+GGG - chr7_3:46804797-46804816 Msa1106680:intron 55.0%
GTTGTTGAACCGGTGCGAAC+CGG - chr7_3:46804823-46804842 Msa1106680:intron 55.0%
!! CGGTTTTAGCCGAGCCATAC+CGG + chr7_3:46804845-46804864 None:intergenic 55.0%
! CGGTATGGCTCGGCTAAAAC+CGG - chr7_3:46804843-46804862 Msa1106680:intron 55.0%
ACCGGTAAAAACCGGCGACT+CGG - chr7_3:46804861-46804880 Msa1106680:intron 55.0%
CTCGTTTGGACCTGAAGGAG+AGG - chr7_3:46805980-46805999 Msa1106680:intron 55.0%
TAGGTCTTACAACTCCCCCC+CGG + chr7_3:46806657-46806676 None:intergenic 55.0%
AGGGTGGTTGTGTCAGAGTG+TGG + chr7_3:46806983-46807002 None:intergenic 55.0%
! TAAAACCGGCTCAGACCGGC+CGG - chr7_3:46804737-46804756 Msa1106680:intron 60.0%
ACACCCCTTCGGTTCCTGGT+CGG + chr7_3:46804773-46804792 None:intergenic 60.0%
GCTCGAACCAGACACCCCTT+CGG + chr7_3:46804784-46804803 None:intergenic 60.0%
TGAACCGGTGCGAACCGGTA+TGG - chr7_3:46804828-46804847 Msa1106680:intron 60.0%
!!! GCCGAGTCGCCGGTTTTTAC+CGG + chr7_3:46804865-46804884 None:intergenic 60.0%
! GGTAAAAACCGGCGACTCGG+CGG - chr7_3:46804864-46804883 Msa1106680:intron 60.0%
CCTTCGGTTCCTGGTCGGAC+CGG + chr7_3:46804768-46804787 None:intergenic 65.0%
CGGTCCGACCAGGAACCGAA+GGG - chr7_3:46804766-46804785 Msa1106680:intron 65.0%
GGTCCGACCAGGAACCGAAG+GGG - chr7_3:46804767-46804786 Msa1106680:intron 65.0%
CCAGACACCCCTTCGGTTCC+TGG + chr7_3:46804777-46804796 None:intergenic 65.0%
!! CCAGGAACCGAAGGGGTGTC+TGG - chr7_3:46804774-46804793 Msa1106680:intron 65.0%
!! CGAGCCATACCGGTTCGCAC+CGG + chr7_3:46804835-46804854 None:intergenic 65.0%
CGGTGCGAACCGGTATGGCT+CGG - chr7_3:46804833-46804852 Msa1106680:intron 65.0%
!! GCTCGGCCATCGACTCGGTA+AGG + chr7_3:46805574-46805593 None:intergenic 65.0%
!! ACTCGGCTCGGCCATCGACT+CGG + chr7_3:46805579-46805598 None:intergenic 65.0%
TTCGACCGGCCGGTCTGAGC+CGG + chr7_3:46804745-46804764 None:intergenic 70.0%
CTCAGACCGGCCGGTCGAAC+CGG - chr7_3:46804746-46804765 Msa1106680:intron 70.0%
!! CCTGGTCGGACCGGTTCGAC+CGG + chr7_3:46804759-46804778 None:intergenic 70.0%
CCGGTCCGACCAGGAACCGA+AGG - chr7_3:46804765-46804784 Msa1106680:intron 70.0%
!! GTCGGACCGGTTCGACCGGC+CGG + chr7_3:46804755-46804774 None:intergenic 75.0%
CCGGTCGAACCGGTCCGACC+AGG - chr7_3:46804756-46804775 Msa1106680:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 46802984 46807664 46802984 ID=Msa1106680;Name=Msa1106680
chr7_3 mRNA 46802984 46807664 46802984 ID=Msa1106680-mRNA-1;Parent=Msa1106680;Name=Msa1106680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.33|0|1|1|1|4|0|329
chr7_3 exon 46807410 46807664 46807410 ID=Msa1106680-mRNA-1:exon:9623;Parent=Msa1106680-mRNA-1
chr7_3 exon 46804235 46804437 46804235 ID=Msa1106680-mRNA-1:exon:9622;Parent=Msa1106680-mRNA-1
chr7_3 exon 46803585 46803852 46803585 ID=Msa1106680-mRNA-1:exon:9621;Parent=Msa1106680-mRNA-1
chr7_3 exon 46802984 46803247 46802984 ID=Msa1106680-mRNA-1:exon:9620;Parent=Msa1106680-mRNA-1
chr7_3 CDS 46807410 46807664 46807410 ID=Msa1106680-mRNA-1:cds;Parent=Msa1106680-mRNA-1
chr7_3 CDS 46804235 46804437 46804235 ID=Msa1106680-mRNA-1:cds;Parent=Msa1106680-mRNA-1
chr7_3 CDS 46803585 46803852 46803585 ID=Msa1106680-mRNA-1:cds;Parent=Msa1106680-mRNA-1
chr7_3 CDS 46802984 46803247 46802984 ID=Msa1106680-mRNA-1:cds;Parent=Msa1106680-mRNA-1
Gene Sequence

>Msa1106680

ATGAGTGTCAACATAGATGAAGCACCCATTTTTGCTCCATCTTTACCAGTTCCAAATGTTCAAGAAATGGTGAAGACGAATCCTTTGCAAGTTCCAACAAAATATGTGAGGAATGAAGAAGAAATGGAGAAAGTAAACTACATGCCTCAACTTTCTTCTGAGATTCCTATCATTGATTTTGCACAGCTTTCAAATGGGAACGTGGAAGAGTTGCTGAAACTTGAGAGTGCATGCAAGGAGTGGGGTTTCTTTCAGATGGTGAATCATGGTGTGCAAAAAGACCTTATACAGAGAATGAGGGATGCATCAAATGAGTTTTTTGAACTTCCAATGGAAGAGAAGGAAAAGTATGCAATGCTCCCAAACGACATACAAGGATATGGGCAAAATTATGTTGTTTCTGAGGAGCAAACACTTGATTGGTCAGACGTACTAGTTTTGATCATTTATCCCAACCGAGAGATAATAGAGGCGTATACAAGTGAAGTGAGACGAGTTGGTGAGGAACTTCTAAGTTTTATGTCTATTATCATGGGGTTGGAGAAGCATGCTCTTGCTGAACTGCATAAAGAATTAATTCAAGGTTTACGTGTGAACTATTACCCTCCTTGCAACAATCCTGAGCAAGTATTGGGTTTGAGTCCACACTCTGACACAACCACCCTTACCTTACTTATTCAAGATGATGACGTGCTTGGATTAGAAATCAGAAACAAAGGAAATTGGATATTGAGTAATGGAAAATACAAAAGTGTAGAACACAGAGTAATGACAAATCAGAACAAAAGAAGGATTTCTTATGCATCATTTTTGTTCCCTCGAGATGACGTTGAAGTTGAGCCCTTTGATCATATGATAGATGCTCAAAACCCTAAGATGTACCAGAAAGTGAAGTATGGAGATTATTTGAGGCATTCCTTAAAGAGAAAAATGGAGCGAAAAACACACACCGATGTGGCGAAGATAAAGGAACATGTAATCGAGAAATAA

Protein sequence

>Msa1106680

MSVNIDEAPIFAPSLPVPNVQEMVKTNPLQVPTKYVRNEEEMEKVNYMPQLSSEIPIIDFAQLSNGNVEELLKLESACKEWGFFQMVNHGVQKDLIQRMRDASNEFFELPMEEKEKYAMLPNDIQGYGQNYVVSEEQTLDWSDVLVLIIYPNREIIEAYTSEVRRVGEELLSFMSIIMGLEKHALAELHKELIQGLRVNYYPPCNNPEQVLGLSPHSDTTTLTLLIQDDDVLGLEIRNKGNWILSNGKYKSVEHRVMTNQNKRRISYASFLFPRDDVEVEPFDHMIDAQNPKMYQKVKYGDYLRHSLKRKMERKTHTDVAKIKEHVIEK*