AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0843420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843420 MtrunA17_Chr5g0414091 90.217 92 9 0 1 92 1 92 2.70e-43 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 105 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCTCAATTATTCTATTA+AGG 0.091257 5_4:-21071642 None:intergenic
GAATATTCAAATGGAGATTT+TGG 0.114126 5_4:+21071010 Msa0843420:CDS
CTGATTTAGGTTATCTTTAT+TGG 0.135262 5_4:+21071125 Msa0843420:three_prime_UTR
GTCCTCAAAGCCTTTCTTAA+AGG 0.191336 5_4:-21071616 None:intergenic
GCTTAGAAATGGTTTGAAAA+TGG 0.203557 5_4:+21070432 Msa0843420:exon
TATGAGAGTGATTTAGTTCT+TGG 0.213205 5_4:+21071544 Msa0843420:three_prime_UTR
GTGCCACTTACGGAATTTAT+TGG 0.276669 5_4:-21071326 None:intergenic
TGCAAAGAAGTGACTCTAAT+TGG 0.285207 5_4:-21071255 None:intergenic
ACAAATGGTAGACCTGATTT+AGG 0.287971 5_4:+21071112 Msa0843420:three_prime_UTR
TTGAGACCAGATGGTCATTC+AGG 0.301177 5_4:+21071913 Msa0843420:three_prime_UTR
GTATAAACAAAGAAGGGATA+TGG 0.313567 5_4:-21070533 None:intergenic
CTTAGAAATGGTTTGAAAAT+GGG 0.322445 5_4:+21070433 Msa0843420:exon
CCTCTCAATTATTCTATTAA+GGG 0.325837 5_4:-21071641 None:intergenic
ATTTATTGGTCTTGCCATCT+TGG 0.346199 5_4:-21071312 None:intergenic
AAAGTGTTTGGTTCAAATCT+TGG 0.349855 5_4:-21071175 None:intergenic
GAATGGATGGTGAGATTAGA+AGG 0.357080 5_4:+21071797 Msa0843420:three_prime_UTR
TCACTCTCATAGTAAATTGA+TGG 0.370160 5_4:-21071532 None:intergenic
AGGAAAGTTGCTAAAGGAAA+TGG 0.381708 5_4:+21071661 Msa0843420:three_prime_UTR
TCAACACCATGCACTATAAA+CGG 0.382294 5_4:-21071388 None:intergenic
GGTGTTGGATGTAACTAAAT+TGG 0.388499 5_4:+21071885 Msa0843420:three_prime_UTR
GGAGAAGATAGTTGGAGGAA+TGG 0.393313 5_4:+21071780 Msa0843420:three_prime_UTR
CACCATAAAACAGTGATTAG+AGG 0.408129 5_4:+21070398 Msa0843420:five_prime_UTR
CAACACCATGCACTATAAAC+GGG 0.408667 5_4:-21071387 None:intergenic
GTTTGTTCTTAATGAGTTTG+AGG 0.410280 5_4:-21071198 None:intergenic
AGAAAAGAGGAGAAGATAGT+TGG 0.414140 5_4:+21071772 Msa0843420:three_prime_UTR
TTCCTTTAAGAAAGGCTTTG+AGG 0.416940 5_4:+21071614 Msa0843420:three_prime_UTR
GGCAAAGGATATTGATCAAA+TGG 0.424223 5_4:+21071471 Msa0843420:three_prime_UTR
CTTAACCTTGTTTACCAAGA+TGG 0.429398 5_4:+21071298 Msa0843420:three_prime_UTR
TTTGGAACTCCATTTGCAAA+TGG 0.431908 5_4:-21071955 None:intergenic
TGAATAGTGGTAGGTGGAAA+TGG 0.434406 5_4:-21070611 None:intergenic
ACTCCATTTGCAAATGGAAA+AGG 0.436668 5_4:-21071949 None:intergenic
CATGAAAGAAAGCTTAGAAA+TGG 0.437782 5_4:+21070421 Msa0843420:five_prime_UTR
ATTTGAAGGTATTAGATTTG+AGG 0.443567 5_4:+21071864 Msa0843420:three_prime_UTR
CAATAAAGATAACCTAAATC+AGG 0.445212 5_4:-21071124 None:intergenic
TGTAGAGATGATGAAGAAGC+GGG 0.445533 5_4:+21072044 Msa0843420:three_prime_UTR
ACAAAAGCTAATAAATTTGA+AGG 0.447815 5_4:+21071850 Msa0843420:three_prime_UTR
CTTGGTAGATTACACTCACT+TGG 0.451639 5_4:-21071157 None:intergenic
TGTGTTCATTGGTGCTTGCC+AGG 0.456446 5_4:+21071994 Msa0843420:three_prime_UTR
TACAAAACGATTGTGTTCAT+TGG 0.458956 5_4:+21071983 Msa0843420:three_prime_UTR
TGAGTGGTGACATTGTATAT+TGG 0.459474 5_4:-21071051 None:intergenic
TTTATAGTGCATGGTGTTGA+AGG 0.460100 5_4:+21071391 Msa0843420:three_prime_UTR
TAGGTTATCTTTATTGGAGA+TGG 0.460710 5_4:+21071131 Msa0843420:three_prime_UTR
GAGTGGTGACATTGTATATT+GGG 0.464461 5_4:-21071050 None:intergenic
TATAAACAAAGAAGGGATAT+GGG 0.464786 5_4:-21070532 None:intergenic
ATGAGTTTGAGGAAAGTGTT+TGG 0.469541 5_4:-21071187 None:intergenic
AAGGATTGAGATAGAAGAAG+TGG 0.473823 5_4:+21071816 Msa0843420:three_prime_UTR
AGAAGCTTAGTTGGTGCAAA+AGG 0.474848 5_4:-21070577 None:intergenic
AAAAGTAAGTAGATGAATAG+TGG 0.478663 5_4:-21070624 None:intergenic
GACTAAGCCTTATAGAAAAG+AGG 0.487707 5_4:+21071759 Msa0843420:three_prime_UTR
CAAAAGGAGTAGGGGACAAA+AGG 0.492005 5_4:-21070561 None:intergenic
CCCTACGAGAGAGTCATGAT+AGG 0.492818 5_4:-21070353 None:intergenic
TAAGGACCTGAATGACCATC+TGG 0.495026 5_4:-21071919 None:intergenic
GAGTCATGATAGGAAGAGAA+AGG 0.495270 5_4:-21070343 None:intergenic
AATGGAAAAGGATTCATGTA+AGG 0.496598 5_4:-21071937 None:intergenic
GTAGAATGAAGAAGCTTAGT+TGG 0.496938 5_4:-21070586 None:intergenic
AAATCATGTGAATATTCAAA+TGG 0.499467 5_4:+21071001 Msa0843420:CDS
AGTGAGAGATGCATCACAAA+TGG 0.499969 5_4:+21071097 Msa0843420:three_prime_UTR
TGCCAGGACCTATAGATACT+TGG 0.502047 5_4:+21072010 Msa0843420:three_prime_UTR
GGATGAAGTATAAACAAAGA+AGG 0.502496 5_4:-21070540 None:intergenic
GGAGGGAAGATTATCATTGA+AGG 0.504043 5_4:-21070467 None:intergenic
GACATGATTGTTGTATCAAC+TGG 0.507795 5_4:+21071493 Msa0843420:three_prime_UTR
TTGTTGGAGATTCTTTGGCT+AGG 0.514286 5_4:+21071230 Msa0843420:three_prime_UTR
TGGTCCCCGTTTATAGTGCA+TGG 0.514963 5_4:+21071382 Msa0843420:three_prime_UTR
AAAGAGGAGAAGATAGTTGG+AGG 0.516930 5_4:+21071775 Msa0843420:three_prime_UTR
TTAGTTGGTGCAAAAGGAGT+AGG 0.517612 5_4:-21070571 None:intergenic
CTCTTTGATTGTGCCACATG+TGG 0.519016 5_4:-21071074 None:intergenic
CGGGGACCAATACAAAGAAA+AGG 0.521289 5_4:-21071368 None:intergenic
GAAGGTGATTGGGATAAGGC+TGG 0.521359 5_4:+21071724 Msa0843420:three_prime_UTR
ATCTCATTCCAAGTATCTAT+AGG 0.524335 5_4:-21072018 None:intergenic
TAGTTGGTGCAAAAGGAGTA+GGG 0.527018 5_4:-21070570 None:intergenic
GATGAAGTATAAACAAAGAA+GGG 0.527867 5_4:-21070539 None:intergenic
TGGATCTTGTTAATGAGAGG+TGG 0.535305 5_4:+21071449 Msa0843420:three_prime_UTR
AGGTATTAGATTTGAGGTGT+TGG 0.536677 5_4:+21071870 Msa0843420:three_prime_UTR
TTCCAAGTATCTATAGGTCC+TGG 0.536833 5_4:-21072012 None:intergenic
ATACCTACAAAAGAAGTTGA+AGG 0.538773 5_4:-21070652 None:intergenic
ATGCATCACCCTTCTCTATG+TGG 0.539115 5_4:-21072075 None:intergenic
AGACCAATAAATTCCGTAAG+TGG 0.539340 5_4:+21071323 Msa0843420:three_prime_UTR
AAGATAGTTGGAGGAATGGA+TGG 0.542345 5_4:+21071784 Msa0843420:three_prime_UTR
GGATCTTGTTAATGAGAGGT+GGG 0.544161 5_4:+21071450 Msa0843420:three_prime_UTR
GAGAAGGAAAGTGCCACTTA+CGG 0.549343 5_4:-21071336 None:intergenic
TTGTAGAGATGATGAAGAAG+CGG 0.549572 5_4:+21072043 Msa0843420:three_prime_UTR
CAATCACCTTCAAAATGAGC+AGG 0.550833 5_4:-21071712 None:intergenic
TCCTATCATGACTCTCTCGT+AGG 0.555482 5_4:+21070352 Msa0843420:five_prime_UTR
GAGGGAAGATTATCATTGAA+GGG 0.555683 5_4:-21070466 None:intergenic
GGTGTTGAAGGATCAAATGA+AGG 0.557511 5_4:+21071403 Msa0843420:three_prime_UTR
GTAAGTAGATGAATAGTGGT+AGG 0.563948 5_4:-21070620 None:intergenic
ATTGAGAGGAAAGTTGCTAA+AGG 0.566358 5_4:+21071655 Msa0843420:three_prime_UTR
TCTTGCCATCTTGGTAAACA+AGG 0.568916 5_4:-21071303 None:intergenic
AGTAGATGAATAGTGGTAGG+TGG 0.577718 5_4:-21070617 None:intergenic
CCTATCATGACTCTCTCGTA+GGG 0.588358 5_4:+21070353 Msa0843420:five_prime_UTR
TTGGCATTATTGAGACCAGA+TGG 0.590154 5_4:+21071904 Msa0843420:three_prime_UTR
GAGTAACATCCACATAGAGA+AGG 0.592343 5_4:+21072066 Msa0843420:three_prime_UTR
TGTTAATGAGAGGTGGGCAA+AGG 0.594392 5_4:+21071456 Msa0843420:three_prime_UTR
GAAAAGGTATCATTATGAGA+AGG 0.599288 5_4:-21071352 None:intergenic
TTGTTGTATCAACTGGCCAT+TGG 0.619734 5_4:+21071500 Msa0843420:three_prime_UTR
ATTGTGCCACATGTGGTGAG+TGG 0.619798 5_4:-21071067 None:intergenic
AGTAACATCCACATAGAGAA+GGG 0.625804 5_4:+21072067 Msa0843420:three_prime_UTR
GTGTTGAAGGATCAAATGAA+GGG 0.628849 5_4:+21071404 Msa0843420:three_prime_UTR
ATTTGAGTATGATTAAACTC+AGG 0.636695 5_4:-21071580 None:intergenic
ATGTCACCACTCACCACATG+TGG 0.638779 5_4:+21071061 Msa0843420:three_prime_UTR
AGTTGGTGCAAAAGGAGTAG+GGG 0.658012 5_4:-21070569 None:intergenic
CCTACAAAAGAAGTTGAAGG+AGG 0.659746 5_4:-21070649 None:intergenic
CCCTTAATAGAATAATTGAG+AGG 0.661863 5_4:+21071641 Msa0843420:three_prime_UTR
AACACCATGCACTATAAACG+GGG 0.681835 5_4:-21071386 None:intergenic
ATAGTGGTAGGTGGAAATGG+TGG 0.690039 5_4:-21070608 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTGATATATTTTTTGC+AGG + chr5_4:21070953-21070972 Msa0843420:intron 15.0%
!!! TTATTGATATATTTTTTGCA+GGG + chr5_4:21070954-21070973 Msa0843420:intron 15.0%
!!! TTATTATAATACGATGTTTT+TGG + chr5_4:21071429-21071448 Msa0843420:three_prime_UTR 15.0%
!!! TTTATTGATATATTTTTTGC+AGG + chr5_4:21070953-21070972 Msa0843420:intron 15.0%
!!! TTATTGATATATTTTTTGCA+GGG + chr5_4:21070954-21070973 Msa0843420:intron 15.0%
!!! TTATTATAATACGATGTTTT+TGG + chr5_4:21071429-21071448 Msa0843420:three_prime_UTR 15.0%
!! AAAAATTTCTTATTGAAGGA+GGG - chr5_4:21070487-21070506 None:intergenic 20.0%
!! AAAAAATTTCTTATTGAAGG+AGG - chr5_4:21070488-21070507 None:intergenic 20.0%
!! CTGAAAAAATTTCTTATTGA+AGG - chr5_4:21070491-21070510 None:intergenic 20.0%
!!! CTAAACGATTATAGAATTTT+CGG - chr5_4:21070700-21070719 None:intergenic 20.0%
!!! TAGCAATTTGTTACTAATTA+AGG + chr5_4:21070911-21070930 Msa0843420:intron 20.0%
!! AAATCATGTGAATATTCAAA+TGG + chr5_4:21071001-21071020 Msa0843420:CDS 20.0%
!!! AATATTCAAATGGAGATTTT+GGG + chr5_4:21071011-21071030 Msa0843420:CDS 20.0%
!!! TTTTTTTGTTCCTTTAAGAA+AGG + chr5_4:21071606-21071625 Msa0843420:three_prime_UTR 20.0%
!!! AAATTTATTAGCTTTTGTCT+TGG - chr5_4:21071848-21071867 None:intergenic 20.0%
!! ACAAAAGCTAATAAATTTGA+AGG + chr5_4:21071850-21071869 Msa0843420:three_prime_UTR 20.0%
!! AAAAATTTCTTATTGAAGGA+GGG - chr5_4:21070487-21070506 None:intergenic 20.0%
!! AAAAAATTTCTTATTGAAGG+AGG - chr5_4:21070488-21070507 None:intergenic 20.0%
!! CTGAAAAAATTTCTTATTGA+AGG - chr5_4:21070491-21070510 None:intergenic 20.0%
!!! CTAAACGATTATAGAATTTT+CGG - chr5_4:21070700-21070719 None:intergenic 20.0%
!!! TAGCAATTTGTTACTAATTA+AGG + chr5_4:21070911-21070930 Msa0843420:intron 20.0%
!! AAATCATGTGAATATTCAAA+TGG + chr5_4:21071001-21071020 Msa0843420:CDS 20.0%
!!! AATATTCAAATGGAGATTTT+GGG + chr5_4:21071011-21071030 Msa0843420:CDS 20.0%
!!! TTTTTTTGTTCCTTTAAGAA+AGG + chr5_4:21071606-21071625 Msa0843420:three_prime_UTR 20.0%
!!! AAATTTATTAGCTTTTGTCT+TGG - chr5_4:21071848-21071867 None:intergenic 20.0%
!! ACAAAAGCTAATAAATTTGA+AGG + chr5_4:21071850-21071869 Msa0843420:three_prime_UTR 20.0%
! TGTTGAGACAAAAAAATCAA+TGG + chr5_4:21070316-21070335 Msa0843420:five_prime_UTR 25.0%
! GTTGAGACAAAAAAATCAAT+GGG + chr5_4:21070317-21070336 Msa0843420:five_prime_UTR 25.0%
! CTTAGAAATGGTTTGAAAAT+GGG + chr5_4:21070433-21070452 Msa0843420:exon 25.0%
! TATAAACAAAGAAGGGATAT+GGG - chr5_4:21070535-21070554 None:intergenic 25.0%
! GATGAAGTATAAACAAAGAA+GGG - chr5_4:21070542-21070561 None:intergenic 25.0%
! AAAAGTAAGTAGATGAATAG+TGG - chr5_4:21070627-21070646 None:intergenic 25.0%
! CGAAAATTCTATAATCGTTT+AGG + chr5_4:21070698-21070717 Msa0843420:intron 25.0%
!!! AGGAGCAATGTTTTAAATTA+TGG + chr5_4:21070718-21070737 Msa0843420:intron 25.0%
! AAAACATGAAACTTTGATGT+TGG + chr5_4:21070823-21070842 Msa0843420:intron 25.0%
!! GAATATTCAAATGGAGATTT+TGG + chr5_4:21071010-21071029 Msa0843420:CDS 25.0%
! CAATAAAGATAACCTAAATC+AGG - chr5_4:21071127-21071146 None:intergenic 25.0%
!! CTGATTTAGGTTATCTTTAT+TGG + chr5_4:21071125-21071144 Msa0843420:three_prime_UTR 25.0%
!! AACAAACATATAGCTTTTGT+TGG + chr5_4:21071214-21071233 Msa0843420:three_prime_UTR 25.0%
!! ATGATACCTTTTCTTTGTAT+TGG + chr5_4:21071362-21071381 Msa0843420:three_prime_UTR 25.0%
! ATTTGAGTATGATTAAACTC+AGG - chr5_4:21071583-21071602 None:intergenic 25.0%
! CCTCTCAATTATTCTATTAA+GGG - chr5_4:21071644-21071663 None:intergenic 25.0%
! TCCTCTCAATTATTCTATTA+AGG - chr5_4:21071645-21071664 None:intergenic 25.0%
!!! ATTTGAAGGTATTAGATTTG+AGG + chr5_4:21071864-21071883 Msa0843420:three_prime_UTR 25.0%
!! CAATCGTTTTGTACATATTT+TGG - chr5_4:21071976-21071995 None:intergenic 25.0%
! TGTTGAGACAAAAAAATCAA+TGG + chr5_4:21070316-21070335 Msa0843420:five_prime_UTR 25.0%
! GTTGAGACAAAAAAATCAAT+GGG + chr5_4:21070317-21070336 Msa0843420:five_prime_UTR 25.0%
! CTTAGAAATGGTTTGAAAAT+GGG + chr5_4:21070433-21070452 Msa0843420:exon 25.0%
! TATAAACAAAGAAGGGATAT+GGG - chr5_4:21070535-21070554 None:intergenic 25.0%
! GATGAAGTATAAACAAAGAA+GGG - chr5_4:21070542-21070561 None:intergenic 25.0%
! AAAAGTAAGTAGATGAATAG+TGG - chr5_4:21070627-21070646 None:intergenic 25.0%
! CGAAAATTCTATAATCGTTT+AGG + chr5_4:21070698-21070717 Msa0843420:intron 25.0%
!!! AGGAGCAATGTTTTAAATTA+TGG + chr5_4:21070718-21070737 Msa0843420:intron 25.0%
! AAAACATGAAACTTTGATGT+TGG + chr5_4:21070823-21070842 Msa0843420:intron 25.0%
!! GAATATTCAAATGGAGATTT+TGG + chr5_4:21071010-21071029 Msa0843420:CDS 25.0%
! CAATAAAGATAACCTAAATC+AGG - chr5_4:21071127-21071146 None:intergenic 25.0%
!! CTGATTTAGGTTATCTTTAT+TGG + chr5_4:21071125-21071144 Msa0843420:three_prime_UTR 25.0%
!! AACAAACATATAGCTTTTGT+TGG + chr5_4:21071214-21071233 Msa0843420:three_prime_UTR 25.0%
!! ATGATACCTTTTCTTTGTAT+TGG + chr5_4:21071362-21071381 Msa0843420:three_prime_UTR 25.0%
! ATTTGAGTATGATTAAACTC+AGG - chr5_4:21071583-21071602 None:intergenic 25.0%
! CCTCTCAATTATTCTATTAA+GGG - chr5_4:21071644-21071663 None:intergenic 25.0%
! TCCTCTCAATTATTCTATTA+AGG - chr5_4:21071645-21071664 None:intergenic 25.0%
!!! ATTTGAAGGTATTAGATTTG+AGG + chr5_4:21071864-21071883 Msa0843420:three_prime_UTR 25.0%
!! CAATCGTTTTGTACATATTT+TGG - chr5_4:21071976-21071995 None:intergenic 25.0%
CATGAAAGAAAGCTTAGAAA+TGG + chr5_4:21070421-21070440 Msa0843420:five_prime_UTR 30.0%
GCTTAGAAATGGTTTGAAAA+TGG + chr5_4:21070432-21070451 Msa0843420:exon 30.0%
GTATAAACAAAGAAGGGATA+TGG - chr5_4:21070536-21070555 None:intergenic 30.0%
GGATGAAGTATAAACAAAGA+AGG - chr5_4:21070543-21070562 None:intergenic 30.0%
ATACCTACAAAAGAAGTTGA+AGG - chr5_4:21070655-21070674 None:intergenic 30.0%
AAAATCATGCTAGTTGAGAT+TGG + chr5_4:21070875-21070894 Msa0843420:intron 30.0%
GTTACTAATTAAGGACTTCT+TGG + chr5_4:21070920-21070939 Msa0843420:intron 30.0%
TAGGTTATCTTTATTGGAGA+TGG + chr5_4:21071131-21071150 Msa0843420:three_prime_UTR 30.0%
! AAAGTGTTTGGTTCAAATCT+TGG - chr5_4:21071178-21071197 None:intergenic 30.0%
GTTTGTTCTTAATGAGTTTG+AGG - chr5_4:21071201-21071220 None:intergenic 30.0%
!! GAAAAGGTATCATTATGAGA+AGG - chr5_4:21071355-21071374 None:intergenic 30.0%
! TTTTGGATCTTGTTAATGAG+AGG + chr5_4:21071446-21071465 Msa0843420:three_prime_UTR 30.0%
TCACTCTCATAGTAAATTGA+TGG - chr5_4:21071535-21071554 None:intergenic 30.0%
!! TATGAGAGTGATTTAGTTCT+TGG + chr5_4:21071544-21071563 Msa0843420:three_prime_UTR 30.0%
CCCTTAATAGAATAATTGAG+AGG + chr5_4:21071641-21071660 Msa0843420:three_prime_UTR 30.0%
! ATCTTCTCCTCTTTTCTATA+AGG - chr5_4:21071769-21071788 None:intergenic 30.0%
AATGGAAAAGGATTCATGTA+AGG - chr5_4:21071940-21071959 None:intergenic 30.0%
! AATCCTTTTCCATTTGCAAA+TGG + chr5_4:21071946-21071965 Msa0843420:three_prime_UTR 30.0%
TACAAAACGATTGTGTTCAT+TGG + chr5_4:21071983-21072002 Msa0843420:three_prime_UTR 30.0%
ATCTCATTCCAAGTATCTAT+AGG - chr5_4:21072021-21072040 None:intergenic 30.0%
CATGAAAGAAAGCTTAGAAA+TGG + chr5_4:21070421-21070440 Msa0843420:five_prime_UTR 30.0%
GCTTAGAAATGGTTTGAAAA+TGG + chr5_4:21070432-21070451 Msa0843420:exon 30.0%
GTATAAACAAAGAAGGGATA+TGG - chr5_4:21070536-21070555 None:intergenic 30.0%
GGATGAAGTATAAACAAAGA+AGG - chr5_4:21070543-21070562 None:intergenic 30.0%
ATACCTACAAAAGAAGTTGA+AGG - chr5_4:21070655-21070674 None:intergenic 30.0%
AAAATCATGCTAGTTGAGAT+TGG + chr5_4:21070875-21070894 Msa0843420:intron 30.0%
GTTACTAATTAAGGACTTCT+TGG + chr5_4:21070920-21070939 Msa0843420:intron 30.0%
TAGGTTATCTTTATTGGAGA+TGG + chr5_4:21071131-21071150 Msa0843420:three_prime_UTR 30.0%
! AAAGTGTTTGGTTCAAATCT+TGG - chr5_4:21071178-21071197 None:intergenic 30.0%
GTTTGTTCTTAATGAGTTTG+AGG - chr5_4:21071201-21071220 None:intergenic 30.0%
!! GAAAAGGTATCATTATGAGA+AGG - chr5_4:21071355-21071374 None:intergenic 30.0%
! TTTTGGATCTTGTTAATGAG+AGG + chr5_4:21071446-21071465 Msa0843420:three_prime_UTR 30.0%
TCACTCTCATAGTAAATTGA+TGG - chr5_4:21071535-21071554 None:intergenic 30.0%
!! TATGAGAGTGATTTAGTTCT+TGG + chr5_4:21071544-21071563 Msa0843420:three_prime_UTR 30.0%
CCCTTAATAGAATAATTGAG+AGG + chr5_4:21071641-21071660 Msa0843420:three_prime_UTR 30.0%
! ATCTTCTCCTCTTTTCTATA+AGG - chr5_4:21071769-21071788 None:intergenic 30.0%
AATGGAAAAGGATTCATGTA+AGG - chr5_4:21071940-21071959 None:intergenic 30.0%
! AATCCTTTTCCATTTGCAAA+TGG + chr5_4:21071946-21071965 Msa0843420:three_prime_UTR 30.0%
TACAAAACGATTGTGTTCAT+TGG + chr5_4:21071983-21072002 Msa0843420:three_prime_UTR 30.0%
ATCTCATTCCAAGTATCTAT+AGG - chr5_4:21072021-21072040 None:intergenic 30.0%
!!! TCACTGTTTTATGGTGTTGT+CGG - chr5_4:21070394-21070413 None:intergenic 35.0%
CACCATAAAACAGTGATTAG+AGG + chr5_4:21070398-21070417 Msa0843420:five_prime_UTR 35.0%
! TGCCTCTAATCACTGTTTTA+TGG - chr5_4:21070403-21070422 None:intergenic 35.0%
GAGGGAAGATTATCATTGAA+GGG - chr5_4:21070469-21070488 None:intergenic 35.0%
GTAGAATGAAGAAGCTTAGT+TGG - chr5_4:21070589-21070608 None:intergenic 35.0%
GTAAGTAGATGAATAGTGGT+AGG - chr5_4:21070623-21070642 None:intergenic 35.0%
AAAGTTAGCGACAACAATTG+TGG - chr5_4:21070851-21070870 None:intergenic 35.0%
!!! ATTTTTTGCAGGGAAGAACA+AGG + chr5_4:21070964-21070983 Msa0843420:intron 35.0%
GAGTGGTGACATTGTATATT+GGG - chr5_4:21071053-21071072 None:intergenic 35.0%
TGAGTGGTGACATTGTATAT+TGG - chr5_4:21071054-21071073 None:intergenic 35.0%
ACAAATGGTAGACCTGATTT+AGG + chr5_4:21071112-21071131 Msa0843420:three_prime_UTR 35.0%
!! ATGAGTTTGAGGAAAGTGTT+TGG - chr5_4:21071190-21071209 None:intergenic 35.0%
! AGCTTTTGTTGGAGATTCTT+TGG + chr5_4:21071225-21071244 Msa0843420:three_prime_UTR 35.0%
TGCAAAGAAGTGACTCTAAT+TGG - chr5_4:21071258-21071277 None:intergenic 35.0%
! CTTAACCTTGTTTACCAAGA+TGG + chr5_4:21071298-21071317 Msa0843420:three_prime_UTR 35.0%
!! ATTTATTGGTCTTGCCATCT+TGG - chr5_4:21071315-21071334 None:intergenic 35.0%
AGACCAATAAATTCCGTAAG+TGG + chr5_4:21071323-21071342 Msa0843420:three_prime_UTR 35.0%
TCAACACCATGCACTATAAA+CGG - chr5_4:21071391-21071410 None:intergenic 35.0%
! TTTATAGTGCATGGTGTTGA+AGG + chr5_4:21071391-21071410 Msa0843420:three_prime_UTR 35.0%
GTGTTGAAGGATCAAATGAA+GGG + chr5_4:21071404-21071423 Msa0843420:three_prime_UTR 35.0%
GGCAAAGGATATTGATCAAA+TGG + chr5_4:21071471-21071490 Msa0843420:three_prime_UTR 35.0%
GACATGATTGTTGTATCAAC+TGG + chr5_4:21071493-21071512 Msa0843420:three_prime_UTR 35.0%
TTGATGGAAGCAAAAACCAA+TGG - chr5_4:21071519-21071538 None:intergenic 35.0%
! TTCCTTTAAGAAAGGCTTTG+AGG + chr5_4:21071614-21071633 Msa0843420:three_prime_UTR 35.0%
ATTGAGAGGAAAGTTGCTAA+AGG + chr5_4:21071655-21071674 Msa0843420:three_prime_UTR 35.0%
AGGAAAGTTGCTAAAGGAAA+TGG + chr5_4:21071661-21071680 Msa0843420:three_prime_UTR 35.0%
! TTTTCACCTGCTCATTTTGA+AGG + chr5_4:21071706-21071725 Msa0843420:three_prime_UTR 35.0%
!! TGCTCATTTTGAAGGTGATT+GGG + chr5_4:21071714-21071733 Msa0843420:three_prime_UTR 35.0%
!! TTTTGAAGGTGATTGGGATA+AGG + chr5_4:21071720-21071739 Msa0843420:three_prime_UTR 35.0%
! GACTAAGCCTTATAGAAAAG+AGG + chr5_4:21071759-21071778 Msa0843420:three_prime_UTR 35.0%
AGAAAAGAGGAGAAGATAGT+TGG + chr5_4:21071772-21071791 Msa0843420:three_prime_UTR 35.0%
AAGGATTGAGATAGAAGAAG+TGG + chr5_4:21071816-21071835 Msa0843420:three_prime_UTR 35.0%
! AGGTATTAGATTTGAGGTGT+TGG + chr5_4:21071870-21071889 Msa0843420:three_prime_UTR 35.0%
! GGTGTTGGATGTAACTAAAT+TGG + chr5_4:21071885-21071904 Msa0843420:three_prime_UTR 35.0%
ACTCCATTTGCAAATGGAAA+AGG - chr5_4:21071952-21071971 None:intergenic 35.0%
! TTTGGAACTCCATTTGCAAA+TGG - chr5_4:21071958-21071977 None:intergenic 35.0%
TTGTAGAGATGATGAAGAAG+CGG + chr5_4:21072043-21072062 Msa0843420:three_prime_UTR 35.0%
AGTAACATCCACATAGAGAA+GGG + chr5_4:21072067-21072086 Msa0843420:three_prime_UTR 35.0%
!!! TCACTGTTTTATGGTGTTGT+CGG - chr5_4:21070394-21070413 None:intergenic 35.0%
CACCATAAAACAGTGATTAG+AGG + chr5_4:21070398-21070417 Msa0843420:five_prime_UTR 35.0%
! TGCCTCTAATCACTGTTTTA+TGG - chr5_4:21070403-21070422 None:intergenic 35.0%
GAGGGAAGATTATCATTGAA+GGG - chr5_4:21070469-21070488 None:intergenic 35.0%
GTAGAATGAAGAAGCTTAGT+TGG - chr5_4:21070589-21070608 None:intergenic 35.0%
GTAAGTAGATGAATAGTGGT+AGG - chr5_4:21070623-21070642 None:intergenic 35.0%
AAAGTTAGCGACAACAATTG+TGG - chr5_4:21070851-21070870 None:intergenic 35.0%
!!! ATTTTTTGCAGGGAAGAACA+AGG + chr5_4:21070964-21070983 Msa0843420:intron 35.0%
GAGTGGTGACATTGTATATT+GGG - chr5_4:21071053-21071072 None:intergenic 35.0%
TGAGTGGTGACATTGTATAT+TGG - chr5_4:21071054-21071073 None:intergenic 35.0%
ACAAATGGTAGACCTGATTT+AGG + chr5_4:21071112-21071131 Msa0843420:three_prime_UTR 35.0%
!! ATGAGTTTGAGGAAAGTGTT+TGG - chr5_4:21071190-21071209 None:intergenic 35.0%
! AGCTTTTGTTGGAGATTCTT+TGG + chr5_4:21071225-21071244 Msa0843420:three_prime_UTR 35.0%
TGCAAAGAAGTGACTCTAAT+TGG - chr5_4:21071258-21071277 None:intergenic 35.0%
! CTTAACCTTGTTTACCAAGA+TGG + chr5_4:21071298-21071317 Msa0843420:three_prime_UTR 35.0%
!! ATTTATTGGTCTTGCCATCT+TGG - chr5_4:21071315-21071334 None:intergenic 35.0%
AGACCAATAAATTCCGTAAG+TGG + chr5_4:21071323-21071342 Msa0843420:three_prime_UTR 35.0%
TCAACACCATGCACTATAAA+CGG - chr5_4:21071391-21071410 None:intergenic 35.0%
! TTTATAGTGCATGGTGTTGA+AGG + chr5_4:21071391-21071410 Msa0843420:three_prime_UTR 35.0%
GTGTTGAAGGATCAAATGAA+GGG + chr5_4:21071404-21071423 Msa0843420:three_prime_UTR 35.0%
GGCAAAGGATATTGATCAAA+TGG + chr5_4:21071471-21071490 Msa0843420:three_prime_UTR 35.0%
GACATGATTGTTGTATCAAC+TGG + chr5_4:21071493-21071512 Msa0843420:three_prime_UTR 35.0%
TTGATGGAAGCAAAAACCAA+TGG - chr5_4:21071519-21071538 None:intergenic 35.0%
! TTCCTTTAAGAAAGGCTTTG+AGG + chr5_4:21071614-21071633 Msa0843420:three_prime_UTR 35.0%
ATTGAGAGGAAAGTTGCTAA+AGG + chr5_4:21071655-21071674 Msa0843420:three_prime_UTR 35.0%
AGGAAAGTTGCTAAAGGAAA+TGG + chr5_4:21071661-21071680 Msa0843420:three_prime_UTR 35.0%
! TTTTCACCTGCTCATTTTGA+AGG + chr5_4:21071706-21071725 Msa0843420:three_prime_UTR 35.0%
!! TGCTCATTTTGAAGGTGATT+GGG + chr5_4:21071714-21071733 Msa0843420:three_prime_UTR 35.0%
!! TTTTGAAGGTGATTGGGATA+AGG + chr5_4:21071720-21071739 Msa0843420:three_prime_UTR 35.0%
! GACTAAGCCTTATAGAAAAG+AGG + chr5_4:21071759-21071778 Msa0843420:three_prime_UTR 35.0%
AGAAAAGAGGAGAAGATAGT+TGG + chr5_4:21071772-21071791 Msa0843420:three_prime_UTR 35.0%
AAGGATTGAGATAGAAGAAG+TGG + chr5_4:21071816-21071835 Msa0843420:three_prime_UTR 35.0%
! AGGTATTAGATTTGAGGTGT+TGG + chr5_4:21071870-21071889 Msa0843420:three_prime_UTR 35.0%
! GGTGTTGGATGTAACTAAAT+TGG + chr5_4:21071885-21071904 Msa0843420:three_prime_UTR 35.0%
ACTCCATTTGCAAATGGAAA+AGG - chr5_4:21071952-21071971 None:intergenic 35.0%
! TTTGGAACTCCATTTGCAAA+TGG - chr5_4:21071958-21071977 None:intergenic 35.0%
TTGTAGAGATGATGAAGAAG+CGG + chr5_4:21072043-21072062 Msa0843420:three_prime_UTR 35.0%
AGTAACATCCACATAGAGAA+GGG + chr5_4:21072067-21072086 Msa0843420:three_prime_UTR 35.0%
GAGTCATGATAGGAAGAGAA+AGG - chr5_4:21070346-21070365 None:intergenic 40.0%
GGAGGGAAGATTATCATTGA+AGG - chr5_4:21070470-21070489 None:intergenic 40.0%
! TAGTTGGTGCAAAAGGAGTA+GGG - chr5_4:21070573-21070592 None:intergenic 40.0%
! TTAGTTGGTGCAAAAGGAGT+AGG - chr5_4:21070574-21070593 None:intergenic 40.0%
! AGAAGCTTAGTTGGTGCAAA+AGG - chr5_4:21070580-21070599 None:intergenic 40.0%
TGAATAGTGGTAGGTGGAAA+TGG - chr5_4:21070614-21070633 None:intergenic 40.0%
AGTAGATGAATAGTGGTAGG+TGG - chr5_4:21070620-21070639 None:intergenic 40.0%
CCTACAAAAGAAGTTGAAGG+AGG - chr5_4:21070652-21070671 None:intergenic 40.0%
! CCTCCTTCAACTTCTTTTGT+AGG + chr5_4:21070649-21070668 Msa0843420:CDS 40.0%
!!! TTTTGGGTTAGTGACATGAG+CGG + chr5_4:21071027-21071046 Msa0843420:exon 40.0%
AGTGAGAGATGCATCACAAA+TGG + chr5_4:21071097-21071116 Msa0843420:three_prime_UTR 40.0%
CTTGGTAGATTACACTCACT+TGG - chr5_4:21071160-21071179 None:intergenic 40.0%
TTGTTGGAGATTCTTTGGCT+AGG + chr5_4:21071230-21071249 Msa0843420:three_prime_UTR 40.0%
TCTTGCCATCTTGGTAAACA+AGG - chr5_4:21071306-21071325 None:intergenic 40.0%
!! GTGCCACTTACGGAATTTAT+TGG - chr5_4:21071329-21071348 None:intergenic 40.0%
AACACCATGCACTATAAACG+GGG - chr5_4:21071389-21071408 None:intergenic 40.0%
CAACACCATGCACTATAAAC+GGG - chr5_4:21071390-21071409 None:intergenic 40.0%
! GGTGTTGAAGGATCAAATGA+AGG + chr5_4:21071403-21071422 Msa0843420:three_prime_UTR 40.0%
TGGATCTTGTTAATGAGAGG+TGG + chr5_4:21071449-21071468 Msa0843420:three_prime_UTR 40.0%
GGATCTTGTTAATGAGAGGT+GGG + chr5_4:21071450-21071469 Msa0843420:three_prime_UTR 40.0%
TTGTTGTATCAACTGGCCAT+TGG + chr5_4:21071500-21071519 Msa0843420:three_prime_UTR 40.0%
GTCCTCAAAGCCTTTCTTAA+AGG - chr5_4:21071619-21071638 None:intergenic 40.0%
CAATCACCTTCAAAATGAGC+AGG - chr5_4:21071715-21071734 None:intergenic 40.0%
!! CTGCTCATTTTGAAGGTGAT+TGG + chr5_4:21071713-21071732 Msa0843420:three_prime_UTR 40.0%
AAAGAGGAGAAGATAGTTGG+AGG + chr5_4:21071775-21071794 Msa0843420:three_prime_UTR 40.0%
AAGATAGTTGGAGGAATGGA+TGG + chr5_4:21071784-21071803 Msa0843420:three_prime_UTR 40.0%
GAATGGATGGTGAGATTAGA+AGG + chr5_4:21071797-21071816 Msa0843420:three_prime_UTR 40.0%
TTGGCATTATTGAGACCAGA+TGG + chr5_4:21071904-21071923 Msa0843420:three_prime_UTR 40.0%
TTCCAAGTATCTATAGGTCC+TGG - chr5_4:21072015-21072034 None:intergenic 40.0%
TGTAGAGATGATGAAGAAGC+GGG + chr5_4:21072044-21072063 Msa0843420:three_prime_UTR 40.0%
GAGTAACATCCACATAGAGA+AGG + chr5_4:21072066-21072085 Msa0843420:three_prime_UTR 40.0%
GAGTCATGATAGGAAGAGAA+AGG - chr5_4:21070346-21070365 None:intergenic 40.0%
GGAGGGAAGATTATCATTGA+AGG - chr5_4:21070470-21070489 None:intergenic 40.0%
! TAGTTGGTGCAAAAGGAGTA+GGG - chr5_4:21070573-21070592 None:intergenic 40.0%
! TTAGTTGGTGCAAAAGGAGT+AGG - chr5_4:21070574-21070593 None:intergenic 40.0%
! AGAAGCTTAGTTGGTGCAAA+AGG - chr5_4:21070580-21070599 None:intergenic 40.0%
TGAATAGTGGTAGGTGGAAA+TGG - chr5_4:21070614-21070633 None:intergenic 40.0%
AGTAGATGAATAGTGGTAGG+TGG - chr5_4:21070620-21070639 None:intergenic 40.0%
CCTACAAAAGAAGTTGAAGG+AGG - chr5_4:21070652-21070671 None:intergenic 40.0%
! CCTCCTTCAACTTCTTTTGT+AGG + chr5_4:21070649-21070668 Msa0843420:CDS 40.0%
!!! TTTTGGGTTAGTGACATGAG+CGG + chr5_4:21071027-21071046 Msa0843420:exon 40.0%
AGTGAGAGATGCATCACAAA+TGG + chr5_4:21071097-21071116 Msa0843420:three_prime_UTR 40.0%
CTTGGTAGATTACACTCACT+TGG - chr5_4:21071160-21071179 None:intergenic 40.0%
TTGTTGGAGATTCTTTGGCT+AGG + chr5_4:21071230-21071249 Msa0843420:three_prime_UTR 40.0%
TCTTGCCATCTTGGTAAACA+AGG - chr5_4:21071306-21071325 None:intergenic 40.0%
!! GTGCCACTTACGGAATTTAT+TGG - chr5_4:21071329-21071348 None:intergenic 40.0%
AACACCATGCACTATAAACG+GGG - chr5_4:21071389-21071408 None:intergenic 40.0%
CAACACCATGCACTATAAAC+GGG - chr5_4:21071390-21071409 None:intergenic 40.0%
! GGTGTTGAAGGATCAAATGA+AGG + chr5_4:21071403-21071422 Msa0843420:three_prime_UTR 40.0%
TGGATCTTGTTAATGAGAGG+TGG + chr5_4:21071449-21071468 Msa0843420:three_prime_UTR 40.0%
GGATCTTGTTAATGAGAGGT+GGG + chr5_4:21071450-21071469 Msa0843420:three_prime_UTR 40.0%
TTGTTGTATCAACTGGCCAT+TGG + chr5_4:21071500-21071519 Msa0843420:three_prime_UTR 40.0%
GTCCTCAAAGCCTTTCTTAA+AGG - chr5_4:21071619-21071638 None:intergenic 40.0%
CAATCACCTTCAAAATGAGC+AGG - chr5_4:21071715-21071734 None:intergenic 40.0%
!! CTGCTCATTTTGAAGGTGAT+TGG + chr5_4:21071713-21071732 Msa0843420:three_prime_UTR 40.0%
AAAGAGGAGAAGATAGTTGG+AGG + chr5_4:21071775-21071794 Msa0843420:three_prime_UTR 40.0%
AAGATAGTTGGAGGAATGGA+TGG + chr5_4:21071784-21071803 Msa0843420:three_prime_UTR 40.0%
GAATGGATGGTGAGATTAGA+AGG + chr5_4:21071797-21071816 Msa0843420:three_prime_UTR 40.0%
TTGGCATTATTGAGACCAGA+TGG + chr5_4:21071904-21071923 Msa0843420:three_prime_UTR 40.0%
TTCCAAGTATCTATAGGTCC+TGG - chr5_4:21072015-21072034 None:intergenic 40.0%
TGTAGAGATGATGAAGAAGC+GGG + chr5_4:21072044-21072063 Msa0843420:three_prime_UTR 40.0%
GAGTAACATCCACATAGAGA+AGG + chr5_4:21072066-21072085 Msa0843420:three_prime_UTR 40.0%
TCCTATCATGACTCTCTCGT+AGG + chr5_4:21070352-21070371 Msa0843420:five_prime_UTR 45.0%
CCTATCATGACTCTCTCGTA+GGG + chr5_4:21070353-21070372 Msa0843420:five_prime_UTR 45.0%
CAAAAGGAGTAGGGGACAAA+AGG - chr5_4:21070564-21070583 None:intergenic 45.0%
! AGTTGGTGCAAAAGGAGTAG+GGG - chr5_4:21070572-21070591 None:intergenic 45.0%
ATAGTGGTAGGTGGAAATGG+TGG - chr5_4:21070611-21070630 None:intergenic 45.0%
CTCTTTGATTGTGCCACATG+TGG - chr5_4:21071077-21071096 None:intergenic 45.0%
!! GAGAAGGAAAGTGCCACTTA+CGG - chr5_4:21071339-21071358 None:intergenic 45.0%
CGGGGACCAATACAAAGAAA+AGG - chr5_4:21071371-21071390 None:intergenic 45.0%
TGTTAATGAGAGGTGGGCAA+AGG + chr5_4:21071456-21071475 Msa0843420:three_prime_UTR 45.0%
GGAGAAGATAGTTGGAGGAA+TGG + chr5_4:21071780-21071799 Msa0843420:three_prime_UTR 45.0%
TTGAGACCAGATGGTCATTC+AGG + chr5_4:21071913-21071932 Msa0843420:three_prime_UTR 45.0%
TAAGGACCTGAATGACCATC+TGG - chr5_4:21071922-21071941 None:intergenic 45.0%
TGCCAGGACCTATAGATACT+TGG + chr5_4:21072010-21072029 Msa0843420:three_prime_UTR 45.0%
ATGCATCACCCTTCTCTATG+TGG - chr5_4:21072078-21072097 None:intergenic 45.0%
TCCTATCATGACTCTCTCGT+AGG + chr5_4:21070352-21070371 Msa0843420:five_prime_UTR 45.0%
CCTATCATGACTCTCTCGTA+GGG + chr5_4:21070353-21070372 Msa0843420:five_prime_UTR 45.0%
CAAAAGGAGTAGGGGACAAA+AGG - chr5_4:21070564-21070583 None:intergenic 45.0%
! AGTTGGTGCAAAAGGAGTAG+GGG - chr5_4:21070572-21070591 None:intergenic 45.0%
ATAGTGGTAGGTGGAAATGG+TGG - chr5_4:21070611-21070630 None:intergenic 45.0%
CTCTTTGATTGTGCCACATG+TGG - chr5_4:21071077-21071096 None:intergenic 45.0%
!! GAGAAGGAAAGTGCCACTTA+CGG - chr5_4:21071339-21071358 None:intergenic 45.0%
CGGGGACCAATACAAAGAAA+AGG - chr5_4:21071371-21071390 None:intergenic 45.0%
TGTTAATGAGAGGTGGGCAA+AGG + chr5_4:21071456-21071475 Msa0843420:three_prime_UTR 45.0%
GGAGAAGATAGTTGGAGGAA+TGG + chr5_4:21071780-21071799 Msa0843420:three_prime_UTR 45.0%
TTGAGACCAGATGGTCATTC+AGG + chr5_4:21071913-21071932 Msa0843420:three_prime_UTR 45.0%
TAAGGACCTGAATGACCATC+TGG - chr5_4:21071922-21071941 None:intergenic 45.0%
TGCCAGGACCTATAGATACT+TGG + chr5_4:21072010-21072029 Msa0843420:three_prime_UTR 45.0%
ATGCATCACCCTTCTCTATG+TGG - chr5_4:21072078-21072097 None:intergenic 45.0%
CCCTACGAGAGAGTCATGAT+AGG - chr5_4:21070356-21070375 None:intergenic 50.0%
ATGTCACCACTCACCACATG+TGG + chr5_4:21071061-21071080 Msa0843420:three_prime_UTR 50.0%
ATTGTGCCACATGTGGTGAG+TGG - chr5_4:21071070-21071089 None:intergenic 50.0%
TGGTCCCCGTTTATAGTGCA+TGG + chr5_4:21071382-21071401 Msa0843420:three_prime_UTR 50.0%
GAAGGTGATTGGGATAAGGC+TGG + chr5_4:21071724-21071743 Msa0843420:three_prime_UTR 50.0%
! TGTGTTCATTGGTGCTTGCC+AGG + chr5_4:21071994-21072013 Msa0843420:three_prime_UTR 50.0%
CCCTACGAGAGAGTCATGAT+AGG - chr5_4:21070356-21070375 None:intergenic 50.0%
ATGTCACCACTCACCACATG+TGG + chr5_4:21071061-21071080 Msa0843420:three_prime_UTR 50.0%
ATTGTGCCACATGTGGTGAG+TGG - chr5_4:21071070-21071089 None:intergenic 50.0%
TGGTCCCCGTTTATAGTGCA+TGG + chr5_4:21071382-21071401 Msa0843420:three_prime_UTR 50.0%
GAAGGTGATTGGGATAAGGC+TGG + chr5_4:21071724-21071743 Msa0843420:three_prime_UTR 50.0%
! TGTGTTCATTGGTGCTTGCC+AGG + chr5_4:21071994-21072013 Msa0843420:three_prime_UTR 50.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 21070311 21072116 21070311 ID=Msa0843420;Name=Msa0843420
chr5_4 mRNA 21070311 21072116 21070311 ID=Msa0843420-mRNA-1;Parent=Msa0843420;Name=Msa0843420-mRNA-1;_AED=0.00;_eAED=0.00;_QI=140|1|1|1|1|1|2|1071|96
chr5_4 exon 21070311 21070670 21070311 ID=Msa0843420-mRNA-1:exon:8691;Parent=Msa0843420-mRNA-1
chr5_4 exon 21070975 21072116 21070975 ID=Msa0843420-mRNA-1:exon:8692;Parent=Msa0843420-mRNA-1
chr5_4 five_prime_UTR 21070311 21070450 21070311 ID=Msa0843420-mRNA-1:five_prime_utr;Parent=Msa0843420-mRNA-1
chr5_4 CDS 21070451 21070670 21070451 ID=Msa0843420-mRNA-1:cds;Parent=Msa0843420-mRNA-1
chr5_4 CDS 21070975 21071045 21070975 ID=Msa0843420-mRNA-1:cds;Parent=Msa0843420-mRNA-1
chr5_4 three_prime_UTR 21071046 21072116 21071046 ID=Msa0843420-mRNA-1:three_prime_utr;Parent=Msa0843420-mRNA-1
Gene Sequence

>Msa0843420

ATGGGAAGCACAAATCCCTTCAATGATAATCTTCCCTCCTTCAATAAGAAATTTTTTCAGTTAACTCTTTATTCATTGCTTCCCATATCCCTTCTTTGTTTATACTTCATCCTTTTGTCCCCTACTCCTTTTGCACCAACTAAGCTTCTTCATTCTACCACCATTTCCACCTACCACTATTCATCTACTTACTTTTCTCCTCCTTCAACTTCTTTTGTAGGGAAGAACAAGGTTTATGATTATGAGAAATCATGTGAATATTCAAATGGAGATTTTGGGTTAGTGACATGA
Protein sequence

>Msa0843420

MGSTNPFNDNLPSFNKKFFQLTLYSLLPISLLCLYFILLSPTPFAPTKLLHSTTISTYHYSSTYFSPPSTSFVGKNKVYDYEKSCEYSNGDFGLVT*