Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847410 | AES97152.1 | 97.784 | 361 | 8 | 0 | 1 | 361 | 61 | 421 | 0.0 | 732 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847410 | sp|A0A061DM17|MTR3_THECC | 69.054 | 349 | 107 | 1 | 1 | 348 | 1 | 349 | 0.0 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847410 | G7JWX2 | 97.784 | 361 | 8 | 0 | 1 | 361 | 61 | 421 | 0.0 | 732 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074750 | Msa0847410 | 0.813510 | 2.468381e-51 | -8.615850e-47 |
| Msa0623990 | Msa0847410 | 0.803838 | 2.879945e-49 | -8.615850e-47 |
| Msa0697720 | Msa0847410 | 0.817880 | 2.620928e-52 | -8.615850e-47 |
| Msa0727530 | Msa0847410 | 0.876668 | 1.162697e-68 | -8.615850e-47 |
| Msa0767500 | Msa0847410 | 0.850576 | 1.553127e-60 | -8.615850e-47 |
| Msa0382310 | Msa0847410 | 0.815044 | 1.130949e-51 | -8.615850e-47 |
| Msa0431210 | Msa0847410 | 0.817993 | 2.472096e-52 | -8.615850e-47 |
| Msa0262700 | Msa0847410 | 0.800838 | 1.194645e-48 | -8.615850e-47 |
| Msa0358400 | Msa0847410 | 0.805320 | 1.412893e-49 | -8.615850e-47 |
| Msa0520270 | Msa0847410 | 0.803890 | 2.809492e-49 | -8.615850e-47 |
| Msa0534980 | Msa0847410 | 0.807113 | 5.921777e-50 | -8.615850e-47 |
| Msa0544170 | Msa0847410 | 0.805219 | 1.483435e-49 | -8.615850e-47 |
| Msa0560500 | Msa0847410 | 0.813431 | 2.568179e-51 | -8.615850e-47 |
| Msa0847410 | Msa0907850 | 0.802402 | 5.707586e-49 | -8.615850e-47 |
| Msa0847410 | Msa1072600 | 0.807979 | 3.880184e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847410 | MtrunA17_Chr5g0419851 | 97.784 | 361 | 8 | 0 | 1 | 361 | 61 | 421 | 0.0 | 732 |
| Msa0847410 | MtrunA17_Chr8g0372821 | 39.572 | 374 | 206 | 3 | 1 | 360 | 1 | 368 | 3.53e-100 | 301 |
| Msa0847410 | MtrunA17_Chr8g0343971 | 41.918 | 365 | 200 | 6 | 1 | 360 | 1 | 358 | 3.83e-97 | 293 |
| Msa0847410 | MtrunA17_Chr4g0008111 | 39.394 | 363 | 211 | 3 | 1 | 360 | 1 | 357 | 1.15e-96 | 291 |
| Msa0847410 | MtrunA17_Chr8g0372671 | 41.530 | 366 | 202 | 3 | 1 | 360 | 1 | 360 | 5.34e-96 | 290 |
| Msa0847410 | MtrunA17_Chr8g0343981 | 40.720 | 361 | 207 | 2 | 1 | 360 | 1 | 355 | 5.85e-96 | 289 |
| Msa0847410 | MtrunA17_Chr3g0144871 | 42.486 | 346 | 180 | 3 | 1 | 333 | 1 | 340 | 1.13e-95 | 289 |
| Msa0847410 | MtrunA17_Chr5g0404631 | 40.267 | 375 | 203 | 4 | 1 | 360 | 11 | 379 | 3.08e-95 | 288 |
| Msa0847410 | MtrunA17_Chr6g0475241 | 38.781 | 361 | 214 | 2 | 1 | 360 | 1 | 355 | 1.38e-93 | 283 |
| Msa0847410 | MtrunA17_Chr3g0107591 | 37.845 | 362 | 202 | 4 | 1 | 347 | 1 | 354 | 1.25e-88 | 271 |
| Msa0847410 | MtrunA17_Chr6g0475221 | 38.420 | 367 | 204 | 6 | 1 | 360 | 1 | 352 | 1.35e-85 | 263 |
| Msa0847410 | MtrunA17_Chr7g0252361 | 38.315 | 368 | 208 | 5 | 5 | 360 | 3 | 363 | 9.65e-77 | 240 |
| Msa0847410 | MtrunA17_Chr3g0107871 | 39.420 | 345 | 196 | 5 | 24 | 360 | 1 | 340 | 2.51e-75 | 236 |
| Msa0847410 | MtrunA17_Chr3g0100101 | 32.464 | 345 | 219 | 5 | 1 | 333 | 10 | 352 | 4.32e-59 | 195 |
| Msa0847410 | MtrunA17_Chr5g0444921 | 31.638 | 354 | 216 | 7 | 1 | 333 | 13 | 361 | 5.42e-58 | 193 |
| Msa0847410 | MtrunA17_Chr1g0208641 | 34.891 | 321 | 181 | 8 | 50 | 361 | 66 | 367 | 9.26e-49 | 168 |
| Msa0847410 | MtrunA17_Chr1g0155451 | 40.097 | 207 | 117 | 2 | 161 | 360 | 9 | 215 | 5.81e-45 | 154 |
| Msa0847410 | MtrunA17_Chr8g0372801 | 46.324 | 136 | 67 | 1 | 90 | 225 | 31 | 160 | 1.39e-37 | 133 |
| Msa0847410 | MtrunA17_Chr1g0155461 | 45.732 | 164 | 75 | 5 | 1 | 152 | 1 | 162 | 7.66e-33 | 121 |
| Msa0847410 | MtrunA17_Chr1g0155491 | 45.143 | 175 | 86 | 3 | 1 | 165 | 1 | 175 | 1.99e-32 | 120 |
| Msa0847410 | MtrunA17_Chr6g0455071 | 59.091 | 88 | 36 | 0 | 137 | 224 | 11 | 98 | 5.89e-32 | 117 |
| Msa0847410 | MtrunA17_Chr3g0099281 | 36.047 | 172 | 96 | 3 | 1 | 161 | 13 | 181 | 4.10e-31 | 116 |
| Msa0847410 | MtrunA17_Chr7g0252341 | 49.565 | 115 | 54 | 2 | 48 | 161 | 21 | 132 | 1.84e-28 | 108 |
| Msa0847410 | MtrunA17_Chr7g0252501 | 34.343 | 198 | 114 | 3 | 173 | 360 | 37 | 228 | 7.19e-26 | 103 |
| Msa0847410 | MtrunA17_Chr1g0155481 | 43.617 | 94 | 53 | 0 | 156 | 249 | 4 | 97 | 4.77e-20 | 85.5 |
| Msa0847410 | MtrunA17_Chr3g0099271 | 27.624 | 181 | 121 | 4 | 161 | 333 | 2 | 180 | 2.74e-17 | 79.7 |
| Msa0847410 | MtrunA17_Chr1g0155471 | 35.294 | 119 | 71 | 2 | 248 | 360 | 5 | 123 | 1.86e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0847410 | AT4G36470.1 | 63.288 | 365 | 128 | 3 | 2 | 360 | 5 | 369 | 1.20e-171 | 483 |
| Msa0847410 | AT1G19640.1 | 42.276 | 369 | 186 | 5 | 1 | 342 | 1 | 369 | 8.05e-84 | 260 |
| Msa0847410 | AT3G11480.1 | 39.503 | 362 | 205 | 6 | 4 | 360 | 26 | 378 | 5.07e-82 | 255 |
| Msa0847410 | AT5G66430.1 | 38.187 | 364 | 198 | 7 | 9 | 358 | 1 | 351 | 1.80e-78 | 245 |
| Msa0847410 | AT5G04370.1 | 38.504 | 361 | 201 | 6 | 9 | 360 | 41 | 389 | 2.85e-78 | 246 |
| Msa0847410 | AT5G04370.2 | 38.504 | 361 | 201 | 6 | 9 | 360 | 60 | 408 | 2.90e-78 | 246 |
| Msa0847410 | AT5G04370.3 | 38.504 | 361 | 201 | 6 | 9 | 360 | 46 | 394 | 3.18e-78 | 246 |
| Msa0847410 | AT5G38020.1 | 39.143 | 350 | 186 | 5 | 6 | 337 | 3 | 343 | 5.88e-77 | 241 |
| Msa0847410 | AT5G04380.3 | 37.500 | 360 | 204 | 7 | 9 | 358 | 38 | 386 | 2.45e-70 | 225 |
| Msa0847410 | AT2G14060.1 | 36.950 | 341 | 194 | 5 | 9 | 337 | 14 | 345 | 1.86e-68 | 219 |
| Msa0847410 | AT5G04380.1 | 36.944 | 360 | 199 | 8 | 9 | 358 | 34 | 375 | 2.33e-66 | 214 |
| Msa0847410 | AT3G21950.1 | 34.957 | 349 | 200 | 5 | 6 | 336 | 3 | 342 | 7.68e-66 | 213 |
| Msa0847410 | AT5G04380.2 | 38.558 | 319 | 176 | 6 | 49 | 358 | 8 | 315 | 8.80e-66 | 211 |
| Msa0847410 | AT5G38020.2 | 38.889 | 306 | 161 | 4 | 49 | 337 | 8 | 304 | 4.02e-65 | 210 |
| Msa0847410 | AT1G68040.1 | 34.627 | 335 | 196 | 8 | 9 | 334 | 13 | 333 | 3.43e-61 | 201 |
| Msa0847410 | AT5G55250.1 | 33.524 | 349 | 211 | 7 | 1 | 333 | 13 | 356 | 1.60e-60 | 199 |
| Msa0847410 | AT3G21950.2 | 32.546 | 381 | 198 | 6 | 6 | 336 | 3 | 374 | 1.09e-59 | 198 |
| Msa0847410 | AT1G15125.1 | 32.840 | 338 | 203 | 7 | 9 | 338 | 1 | 322 | 1.25e-53 | 181 |
| Msa0847410 | AT5G55250.2 | 33.544 | 316 | 189 | 7 | 34 | 333 | 8 | 318 | 1.79e-53 | 180 |
| Msa0847410 | AT2G14060.2 | 43.119 | 218 | 114 | 3 | 9 | 225 | 14 | 222 | 7.28e-52 | 173 |
| Msa0847410 | AT5G38780.1 | 30.199 | 351 | 218 | 7 | 4 | 342 | 5 | 340 | 5.79e-51 | 174 |
| Msa0847410 | AT5G56300.1 | 31.322 | 348 | 216 | 6 | 5 | 336 | 20 | 360 | 1.03e-50 | 174 |
| Msa0847410 | AT5G38100.1 | 30.851 | 376 | 219 | 12 | 4 | 360 | 5 | 358 | 1.59e-50 | 172 |
| Msa0847410 | AT5G37970.1 | 32.479 | 351 | 205 | 10 | 7 | 342 | 8 | 341 | 3.26e-50 | 172 |
| Msa0847410 | AT5G37990.1 | 32.081 | 346 | 203 | 9 | 7 | 337 | 8 | 336 | 1.18e-49 | 171 |
| Msa0847410 | AT4G26420.1 | 32.033 | 359 | 216 | 8 | 6 | 344 | 10 | 360 | 1.15e-47 | 166 |
| Msa0847410 | AT5G38100.3 | 31.232 | 349 | 201 | 12 | 28 | 360 | 10 | 335 | 2.69e-47 | 164 |
| Msa0847410 | AT5G38780.2 | 30.640 | 297 | 183 | 6 | 54 | 342 | 10 | 291 | 2.00e-44 | 155 |
| Msa0847410 | AT3G44840.1 | 30.685 | 365 | 222 | 11 | 7 | 361 | 5 | 348 | 5.62e-43 | 152 |
| Msa0847410 | AT5G38100.4 | 37.657 | 239 | 119 | 9 | 4 | 230 | 5 | 225 | 9.29e-41 | 144 |
| Msa0847410 | AT5G38100.2 | 37.657 | 239 | 119 | 9 | 4 | 230 | 5 | 225 | 1.03e-40 | 144 |
| Msa0847410 | AT3G44870.1 | 32.517 | 286 | 175 | 5 | 7 | 290 | 5 | 274 | 5.00e-40 | 145 |
| Msa0847410 | AT1G15125.2 | 37.443 | 219 | 120 | 4 | 9 | 223 | 1 | 206 | 1.67e-39 | 140 |
| Msa0847410 | AT3G44860.1 | 30.245 | 367 | 219 | 10 | 7 | 360 | 5 | 347 | 2.61e-38 | 140 |
| Msa0847410 | AT1G66700.1 | 28.453 | 362 | 231 | 9 | 9 | 360 | 9 | 352 | 2.17e-37 | 138 |
| Msa0847410 | AT4G26420.3 | 36.323 | 223 | 130 | 5 | 6 | 224 | 10 | 224 | 1.29e-36 | 133 |
| Msa0847410 | AT4G26420.2 | 36.364 | 220 | 128 | 5 | 9 | 224 | 1 | 212 | 8.10e-36 | 131 |
| Msa0847410 | AT1G66720.1 | 27.174 | 368 | 227 | 12 | 9 | 360 | 9 | 351 | 4.79e-33 | 126 |
| Msa0847410 | AT1G66690.1 | 27.446 | 368 | 243 | 8 | 1 | 360 | 1 | 352 | 6.98e-32 | 123 |
| Msa0847410 | AT1G66700.3 | 31.019 | 216 | 130 | 4 | 9 | 219 | 9 | 210 | 9.65e-28 | 110 |
Find 78 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTTCAATTCTATCTTTA+AGG | 0.090377 | 5_4:+29377673 | Msa0847410:CDS |
| AATTTCAATGTGGTATATTT+TGG | 0.167945 | 5_4:+29382655 | Msa0847410:three_prime_UTR |
| TCTTCTATTTCTTCTCTTGA+TGG | 0.183566 | 5_4:-29382363 | None:intergenic |
| ACAAAGTGCAAGTAACTATT+AGG | 0.200532 | 5_4:-29377797 | None:intergenic |
| TTGATGATTGATAGAGTATT+TGG | 0.223902 | 5_4:-29377560 | None:intergenic |
| TATCTTGATTAAGCAACTTT+TGG | 0.236852 | 5_4:-29377709 | None:intergenic |
| AGCATACTCTAAGCAGTTTC+AGG | 0.243708 | 5_4:+29378518 | Msa0847410:CDS |
| CCAGTTTGGAGAAAAGATTT+TGG | 0.254482 | 5_4:+29382524 | Msa0847410:CDS |
| AAAATGGTGCTTACATTTCT+AGG | 0.257688 | 5_4:+29378594 | Msa0847410:CDS |
| TGTAGTATAGCTAGGACTTC+AGG | 0.276338 | 5_4:+29382774 | Msa0847410:three_prime_UTR |
| GAGTATAGGCATTGCTGATT+TGG | 0.281462 | 5_4:+29377523 | Msa0847410:CDS |
| ACAGAGGCAACTCTTTCTTC+TGG | 0.290156 | 5_4:+29378640 | Msa0847410:CDS |
| GGTTAGAAATCATTGATTCT+TGG | 0.298408 | 5_4:-29382503 | None:intergenic |
| TTCTGTTCATCATAGATTGC+AGG | 0.310451 | 5_4:-29378435 | None:intergenic |
| TCAATGATTTCTAACCAGTT+TGG | 0.343258 | 5_4:+29382510 | Msa0847410:CDS |
| CAGAGGCAACTCTTTCTTCT+GGG | 0.360572 | 5_4:+29378641 | Msa0847410:CDS |
| GTCATTGAAATTAGAGAGGT+TGG | 0.365365 | 5_4:+29382404 | Msa0847410:CDS |
| AGTATAGGCATTGCTGATTT+GGG | 0.367599 | 5_4:+29377524 | Msa0847410:CDS |
| TTGAAAGCCAGTGTAAACTA+TGG | 0.371002 | 5_4:-29377829 | None:intergenic |
| GCTGATTTGGGATGTTCATC+TGG | 0.374942 | 5_4:+29377536 | Msa0847410:CDS |
| TCAGCAATGCCTATACTCTT+TGG | 0.382092 | 5_4:-29377518 | None:intergenic |
| TTGCCTCTGTCAACATGTTC+AGG | 0.395884 | 5_4:-29378627 | None:intergenic |
| ATAGAATTGAAGTCATTAGT+TGG | 0.400155 | 5_4:-29377665 | None:intergenic |
| AAAAGTTGCTTAATCAAGAT+AGG | 0.400547 | 5_4:+29377711 | Msa0847410:CDS |
| TATGCTTGAGAAACCACTTC+AGG | 0.400799 | 5_4:-29378501 | None:intergenic |
| ATAGTTTACACTGGCTTTCA+AGG | 0.405651 | 5_4:+29377831 | Msa0847410:CDS |
| TTTCCTTGTTCCTTCGATCA+AGG | 0.407489 | 5_4:+29378547 | Msa0847410:CDS |
| ACACATATTGGACTAATTAG+AGG | 0.409415 | 5_4:-29382717 | None:intergenic |
| GTAAGCGCAGTTACACATAT+TGG | 0.428228 | 5_4:-29382729 | None:intergenic |
| TAGATAAGAAGGAGCAAGGC+AGG | 0.435823 | 5_4:+29382439 | Msa0847410:CDS |
| CTTATGACTTGTTAATTGAA+TGG | 0.447928 | 5_4:-29377597 | None:intergenic |
| CAAAGTGCAAGTAACTATTA+GGG | 0.459256 | 5_4:-29377796 | None:intergenic |
| GCAAAAGTGTTTCATATGAC+TGG | 0.462421 | 5_4:+29377299 | Msa0847410:CDS |
| TCTGAAGAATTAGTTGTTGG+TGG | 0.473474 | 5_4:+29378570 | Msa0847410:CDS |
| GTTTGAGAACTATGCAATGC+TGG | 0.485835 | 5_4:+29382554 | Msa0847410:CDS |
| GTAGTATAGCTAGGACTTCA+GGG | 0.492448 | 5_4:+29382775 | Msa0847410:three_prime_UTR |
| GAAACAACACCAAAGAGTAT+AGG | 0.498471 | 5_4:+29377509 | Msa0847410:CDS |
| AATGTTTGACATAGATAAGA+AGG | 0.500046 | 5_4:+29382428 | Msa0847410:CDS |
| CTTGTAGTTGTAGTATAGCT+AGG | 0.503709 | 5_4:+29382766 | Msa0847410:three_prime_UTR |
| ATGCTTGAGAAACCACTTCA+GGG | 0.508721 | 5_4:-29378500 | None:intergenic |
| TTTCATATGACTGGAGGAGT+TGG | 0.517310 | 5_4:+29377308 | Msa0847410:CDS |
| AGAAATCATTGATTCTTGGA+TGG | 0.518959 | 5_4:-29382499 | None:intergenic |
| AGGTCTGAAGAATTAGTTGT+TGG | 0.520501 | 5_4:+29378567 | Msa0847410:CDS |
| CAATCTATGATGAACAGAAA+AGG | 0.521627 | 5_4:+29378439 | Msa0847410:CDS |
| ATAGAAGATGAGGTAATGAA+AGG | 0.526260 | 5_4:+29382378 | Msa0847410:CDS |
| CTTTACTATTCTAGTCTCAC+AGG | 0.527990 | 5_4:+29378680 | Msa0847410:CDS |
| ACAGAAAAGGTCTTTGAACA+AGG | 0.529384 | 5_4:+29378452 | Msa0847410:CDS |
| ATTCCTCCCATAGTTTACAC+TGG | 0.536094 | 5_4:+29377822 | Msa0847410:CDS |
| AAGATGAGGTAATGAAAGGA+GGG | 0.536827 | 5_4:+29382382 | Msa0847410:CDS |
| GAAGATGAGGTAATGAAAGG+AGG | 0.537930 | 5_4:+29382381 | Msa0847410:CDS |
| AAGAGAAGAAATAGAAGATG+AGG | 0.539874 | 5_4:+29382368 | Msa0847410:CDS |
| CACATATTGGACTAATTAGA+GGG | 0.542859 | 5_4:-29382716 | None:intergenic |
| TGATGAAGAAATTGCAAAGG+AGG | 0.543048 | 5_4:+29382578 | Msa0847410:CDS |
| GAGCAAGGCAGGGAGAGCTA+TGG | 0.556285 | 5_4:+29382450 | Msa0847410:CDS |
| CTTACATTTCTAGGAAGAAG+AGG | 0.558020 | 5_4:+29378603 | Msa0847410:CDS |
| GAGGGTCATTGAAATTAGAG+AGG | 0.564053 | 5_4:+29382400 | Msa0847410:CDS |
| CTGTGAGACTAGAATAGTAA+AGG | 0.565747 | 5_4:-29378679 | None:intergenic |
| TAGTTTACACTGGCTTTCAA+GGG | 0.566931 | 5_4:+29377832 | Msa0847410:CDS |
| ATGTGATAAAAGCCCTGAAG+TGG | 0.573917 | 5_4:+29378488 | Msa0847410:CDS |
| GACATAGATAAGAAGGAGCA+AGG | 0.574472 | 5_4:+29382435 | Msa0847410:CDS |
| TGAAAGCCAGTGTAAACTAT+GGG | 0.578907 | 5_4:-29377828 | None:intergenic |
| AGTCTTCCATAAAATGAACC+AGG | 0.581914 | 5_4:-29377770 | None:intergenic |
| AGAACAAGAACAAACGTGAT+GGG | 0.584403 | 5_4:-29382609 | None:intergenic |
| AAGAACAAGAACAAACGTGA+TGG | 0.594278 | 5_4:-29382610 | None:intergenic |
| AGACCTTGATCGAAGGAACA+AGG | 0.605492 | 5_4:-29378550 | None:intergenic |
| TGTTCATCATAGATTGCAGG+AGG | 0.605716 | 5_4:-29378432 | None:intergenic |
| CAGAAAAGGTCTTTGAACAA+GGG | 0.606248 | 5_4:+29378453 | Msa0847410:CDS |
| AGACTCTAAATTCAGTAGAG+TGG | 0.607770 | 5_4:-29377628 | None:intergenic |
| CTATGGTACAGATGTTGCAA+AGG | 0.624437 | 5_4:+29382467 | Msa0847410:CDS |
| ATTCTTCAGACCTTGATCGA+AGG | 0.628016 | 5_4:-29378557 | None:intergenic |
| AGATAAGAAGGAGCAAGGCA+GGG | 0.631315 | 5_4:+29382440 | Msa0847410:CDS |
| AAAGTGTTTCATATGACTGG+AGG | 0.635621 | 5_4:+29377302 | Msa0847410:CDS |
| AAGCCAGTGTAAACTATGGG+AGG | 0.640625 | 5_4:-29377825 | None:intergenic |
| AAGAGAATGAACCTGTAGTG+AGG | 0.647069 | 5_4:-29377354 | None:intergenic |
| GTCTTCCATAAAATGAACCA+GGG | 0.674623 | 5_4:-29377769 | None:intergenic |
| GGACCTGAACATGTTGACAG+AGG | 0.711511 | 5_4:+29378624 | Msa0847410:CDS |
| GGTTGATGAAGAAATTGCAA+AGG | 0.715601 | 5_4:+29382575 | Msa0847410:CDS |
| ATATGTAACAAATTTCAATG+TGG | 0.728073 | 5_4:+29382645 | Msa0847410:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTTTATTAAAAAAA+AGG | - | chr5_4:29382063-29382082 | None:intergenic | 0.0% |
| !! | AAGTAAATAAATATTATGAA+TGG | - | chr5_4:29377416-29377435 | None:intergenic | 10.0% |
| !!! | ATAAAACTTTTTTATATTGA+CGG | - | chr5_4:29379412-29379431 | None:intergenic | 10.0% |
| !!! | ATTTAACTTATAAATGAATT+TGG | - | chr5_4:29379517-29379536 | None:intergenic | 10.0% |
| !! | AATATATATGTAATGATTTA+AGG | + | chr5_4:29379709-29379728 | Msa0847410:intron | 10.0% |
| !!! | TTAATAAAATTTTATGAGTA+TGG | + | chr5_4:29382068-29382087 | Msa0847410:intron | 10.0% |
| !! | ATTTATGAAAAACATATTTG+AGG | - | chr5_4:29377920-29377939 | None:intergenic | 15.0% |
| !!! | TTGTATTTTGTTAGTTAATT+TGG | + | chr5_4:29377948-29377967 | Msa0847410:intron | 15.0% |
| !!! | AAATGTTATCTTTACTATTT+TGG | + | chr5_4:29378719-29378738 | Msa0847410:intron | 15.0% |
| !!! | TAACTCATTTTTTTTTTTTG+AGG | - | chr5_4:29379377-29379396 | None:intergenic | 15.0% |
| !!! | ATTTTACTTTATTGGTTTTT+TGG | - | chr5_4:29379685-29379704 | None:intergenic | 15.0% |
| !! | AAAAAACCAATAAAGTAAAA+TGG | + | chr5_4:29379684-29379703 | Msa0847410:intron | 15.0% |
| !!! | TATTTTCCATTTTACTTTAT+TGG | - | chr5_4:29379693-29379712 | None:intergenic | 15.0% |
| !!! | ACGTTTATTTTATGTATTTT+TGG | + | chr5_4:29380141-29380160 | Msa0847410:intron | 15.0% |
| !! | TGTGAAATATTAAAGTATAA+TGG | - | chr5_4:29380550-29380569 | None:intergenic | 15.0% |
| !! | AACTAAGAAAACCAAAAAAA+TGG | + | chr5_4:29377271-29377290 | Msa0847410:exon | 20.0% |
| !! | TTAATCAAGATAGGAAAAAT+GGG | + | chr5_4:29377720-29377739 | Msa0847410:CDS | 20.0% |
| !! | AAAAAGAAGTAATGAAAAGA+AGG | - | chr5_4:29377869-29377888 | None:intergenic | 20.0% |
| !! | TTACCTATAAAAGATATACT+TGG | + | chr5_4:29377982-29378001 | Msa0847410:intron | 20.0% |
| !!! | TTTGTAATTTTGATACATTC+AGG | + | chr5_4:29378012-29378031 | Msa0847410:intron | 20.0% |
| !!! | TTGTAATTTTGATACATTCA+GGG | + | chr5_4:29378013-29378032 | Msa0847410:intron | 20.0% |
| !!! | ACATTTTGTTATTTTTAACG+TGG | - | chr5_4:29378287-29378306 | None:intergenic | 20.0% |
| !! | AAAGATAACATTTGTGTTAA+AGG | - | chr5_4:29378712-29378731 | None:intergenic | 20.0% |
| !! | AAAACAAATGCATTCTATAT+AGG | + | chr5_4:29378809-29378828 | Msa0847410:intron | 20.0% |
| !! | TCATTTATAAATACATTGTG+TGG | - | chr5_4:29379229-29379248 | None:intergenic | 20.0% |
| !! | ACACAATGTATTTATAAATG+AGG | + | chr5_4:29379228-29379247 | Msa0847410:intron | 20.0% |
| !! | CACAATGTATTTATAAATGA+GGG | + | chr5_4:29379229-29379248 | Msa0847410:intron | 20.0% |
| !! | ATTAATTGATGTACACAATT+GGG | - | chr5_4:29379481-29379500 | None:intergenic | 20.0% |
| !! | AATTAATTGATGTACACAAT+TGG | - | chr5_4:29379482-29379501 | None:intergenic | 20.0% |
| !! | CTATCTCTATAAACTAAATT+TGG | - | chr5_4:29379646-29379665 | None:intergenic | 20.0% |
| !! | GTTTCCATACTTAAAAATAT+GGG | - | chr5_4:29380283-29380302 | None:intergenic | 20.0% |
| !! | TGTTTCCATACTTAAAAATA+TGG | - | chr5_4:29380284-29380303 | None:intergenic | 20.0% |
| !!! | GTTAGTTCTTTTTTTTTTGA+AGG | + | chr5_4:29380342-29380361 | Msa0847410:intron | 20.0% |
| !!! | GATGATATATCTAAAATTCA+TGG | + | chr5_4:29380609-29380628 | Msa0847410:intron | 20.0% |
| !!! | TTCAAAACTGATTTCTAAAT+TGG | - | chr5_4:29380731-29380750 | None:intergenic | 20.0% |
| !! | TAAACTATAAATAACGTTGT+TGG | + | chr5_4:29380759-29380778 | Msa0847410:intron | 20.0% |
| !! | AAACTATAAATAACGTTGTT+GGG | + | chr5_4:29380760-29380779 | Msa0847410:intron | 20.0% |
| !! | TGTTAAACATATCAAATAGT+TGG | + | chr5_4:29381068-29381087 | Msa0847410:intron | 20.0% |
| !! | TAGCTTAAAAACTATATTGA+TGG | + | chr5_4:29381111-29381130 | Msa0847410:intron | 20.0% |
| !! | AGTATCAAGTTCATTTAATA+TGG | - | chr5_4:29381346-29381365 | None:intergenic | 20.0% |
| !!! | ATAAAATTTTATGAGTATGG+TGG | + | chr5_4:29382071-29382090 | Msa0847410:intron | 20.0% |
| !! | ATATGTAACAAATTTCAATG+TGG | + | chr5_4:29382645-29382664 | Msa0847410:three_prime_UTR | 20.0% |
| !!! | AATTTCAATGTGGTATATTT+TGG | + | chr5_4:29382655-29382674 | Msa0847410:three_prime_UTR | 20.0% |
| !!! | TTTTGCTACATCCATTTTTT+TGG | - | chr5_4:29377285-29377304 | None:intergenic | 25.0% |
| !! | TTGATGATTGATAGAGTATT+TGG | - | chr5_4:29377563-29377582 | None:intergenic | 25.0% |
| !!! | CTTATGACTTGTTAATTGAA+TGG | - | chr5_4:29377600-29377619 | None:intergenic | 25.0% |
| ! | ATAGAATTGAAGTCATTAGT+TGG | - | chr5_4:29377668-29377687 | None:intergenic | 25.0% |
| ! | TGACTTCAATTCTATCTTTA+AGG | + | chr5_4:29377673-29377692 | Msa0847410:CDS | 25.0% |
| !! | TATCTTGATTAAGCAACTTT+TGG | - | chr5_4:29377712-29377731 | None:intergenic | 25.0% |
| ! | AAAAGTTGCTTAATCAAGAT+AGG | + | chr5_4:29377711-29377730 | Msa0847410:CDS | 25.0% |
| ! | CTTAATCAAGATAGGAAAAA+TGG | + | chr5_4:29377719-29377738 | Msa0847410:CDS | 25.0% |
| !! | TCTCCAAGTATATCTTTTAT+AGG | - | chr5_4:29377988-29378007 | None:intergenic | 25.0% |
| ! | ACAAATGCATAATATATGCA+GGG | + | chr5_4:29378116-29378135 | Msa0847410:intron | 25.0% |
| !! | ATTTTAAATATGGAGAAGTG+GGG | - | chr5_4:29378164-29378183 | None:intergenic | 25.0% |
| !! | CATTTTAAATATGGAGAAGT+GGG | - | chr5_4:29378165-29378184 | None:intergenic | 25.0% |
| !! | ACATTTTAAATATGGAGAAG+TGG | - | chr5_4:29378166-29378185 | None:intergenic | 25.0% |
| ! | ATCATAGCTATATGTAATTG+TGG | + | chr5_4:29378386-29378405 | Msa0847410:intron | 25.0% |
| !!! | ATTTTGGAACTCAATAATCA+AGG | + | chr5_4:29378735-29378754 | Msa0847410:intron | 25.0% |
| ! | TAAATTACACACACAATTGA+TGG | - | chr5_4:29378922-29378941 | None:intergenic | 25.0% |
| ! | ACCTATTGTGTACATAAATA+GGG | + | chr5_4:29379017-29379036 | Msa0847410:intron | 25.0% |
| ! | TTAACTCATTTGAAAATGCT+TGG | - | chr5_4:29379348-29379367 | None:intergenic | 25.0% |
| ! | TTAATTGATGTACACAATTG+GGG | - | chr5_4:29379480-29379499 | None:intergenic | 25.0% |
| !! | TGAGTAAAAATCAACTTTTG+TGG | + | chr5_4:29379735-29379754 | Msa0847410:intron | 25.0% |
| ! | TCTCTTGTGTTTATCATAAA+GGG | + | chr5_4:29380007-29380026 | Msa0847410:intron | 25.0% |
| ! | CTTAAAAATATGGGACAATA+GGG | - | chr5_4:29380274-29380293 | None:intergenic | 25.0% |
| ! | ACTTAAAAATATGGGACAAT+AGG | - | chr5_4:29380275-29380294 | None:intergenic | 25.0% |
| !!! | TTGTCCCATATTTTTAAGTA+TGG | + | chr5_4:29380276-29380295 | Msa0847410:intron | 25.0% |
| !! | TTTTTGTATATAGATAGAGC+TGG | - | chr5_4:29380385-29380404 | None:intergenic | 25.0% |
| ! | GATATATCATCATGCTAAAA+AGG | - | chr5_4:29380600-29380619 | None:intergenic | 25.0% |
| ! | TCAAATAGTTGGATAAATTG+AGG | + | chr5_4:29381079-29381098 | Msa0847410:intron | 25.0% |
| !! | TTGATGGTTTATTCAATAGT+AGG | + | chr5_4:29381127-29381146 | Msa0847410:intron | 25.0% |
| ! | TCAATAGTAGGATTGTTAAA+TGG | + | chr5_4:29381139-29381158 | Msa0847410:intron | 25.0% |
| ! | CAATAGTAGGATTGTTAAAT+GGG | + | chr5_4:29381140-29381159 | Msa0847410:intron | 25.0% |
| ! | AAAAATGACAATGTGGAAAT+TGG | - | chr5_4:29381308-29381327 | None:intergenic | 25.0% |
| !! | AAGGTGTTATAACATTGAAT+AGG | - | chr5_4:29381537-29381556 | None:intergenic | 25.0% |
| ! | AACTGCATTAGATCTAAATT+TGG | + | chr5_4:29381771-29381790 | Msa0847410:intron | 25.0% |
| ! | TTAGATCTAAATTTGGAGAA+AGG | + | chr5_4:29381778-29381797 | Msa0847410:intron | 25.0% |
| ! | TAGATCTAAATTTGGAGAAA+GGG | + | chr5_4:29381779-29381798 | Msa0847410:intron | 25.0% |
| ! | GGAAAACATTTGAAAAGTAA+TGG | + | chr5_4:29381805-29381824 | Msa0847410:intron | 25.0% |
| ! | ATTTGAAAAGTAATGGCATA+AGG | + | chr5_4:29381812-29381831 | Msa0847410:intron | 25.0% |
| ! | TTTGAAAAGTAATGGCATAA+GGG | + | chr5_4:29381813-29381832 | Msa0847410:intron | 25.0% |
| !! | TTTTTCTGAATCAAAAGCAA+TGG | - | chr5_4:29382164-29382183 | None:intergenic | 25.0% |
| !!! | TTTGCTTTGATTTGTATTGA+AGG | + | chr5_4:29382290-29382309 | Msa0847410:intron | 25.0% |
| !!! | TTGCTTTGATTTGTATTGAA+GGG | + | chr5_4:29382291-29382310 | Msa0847410:intron | 25.0% |
| ! | AATGTTTGACATAGATAAGA+AGG | + | chr5_4:29382428-29382447 | Msa0847410:CDS | 25.0% |
| !!! | TATATTTTGGTTGGAAGTAA+TGG | + | chr5_4:29382668-29382687 | Msa0847410:three_prime_UTR | 25.0% |
| !!! | ATATTTTGGTTGGAAGTAAT+GGG | + | chr5_4:29382669-29382688 | Msa0847410:three_prime_UTR | 25.0% |
| !! | ACAGAAAAAAGCATCAGATA+AGG | + | chr5_4:29377445-29377464 | Msa0847410:intron | 30.0% |
| !!! | TTAAGCAACTTTTGGAATTC+AGG | - | chr5_4:29377704-29377723 | None:intergenic | 30.0% |
| CAAAGTGCAAGTAACTATTA+GGG | - | chr5_4:29377799-29377818 | None:intergenic | 30.0% | |
| ACAAAGTGCAAGTAACTATT+AGG | - | chr5_4:29377800-29377819 | None:intergenic | 30.0% | |
| AGAAGTAATGAAAAGAAGGT+AGG | - | chr5_4:29377865-29377884 | None:intergenic | 30.0% | |
| GACAAATGCATAATATATGC+AGG | + | chr5_4:29378115-29378134 | Msa0847410:intron | 30.0% | |
| CAAATGCATAATATATGCAG+GGG | + | chr5_4:29378117-29378136 | Msa0847410:intron | 30.0% | |
| ! | CAGCTCACACATTTTAAATA+TGG | - | chr5_4:29378174-29378193 | None:intergenic | 30.0% |
| !! | GGTTATTTCTTGCTTATGTT+AGG | + | chr5_4:29378407-29378426 | Msa0847410:intron | 30.0% |
| CAATCTATGATGAACAGAAA+AGG | + | chr5_4:29378439-29378458 | Msa0847410:CDS | 30.0% | |
| ! | ATTAGTTGTTGGTGGAAAAA+TGG | + | chr5_4:29378578-29378597 | Msa0847410:CDS | 30.0% |
| AAAATGGTGCTTACATTTCT+AGG | + | chr5_4:29378594-29378613 | Msa0847410:CDS | 30.0% | |
| !! | AATTGATGGTGAAACATTGA+CGG | - | chr5_4:29378908-29378927 | None:intergenic | 30.0% |
| TATGTACACAATAGGTGTAA+AGG | - | chr5_4:29379013-29379032 | None:intergenic | 30.0% | |
| CACCTATTGTGTACATAAAT+AGG | + | chr5_4:29379016-29379035 | Msa0847410:intron | 30.0% | |
| ACCCTATTTATGTACACAAT+AGG | - | chr5_4:29379021-29379040 | None:intergenic | 30.0% | |
| ATGTTCGTGAACATAAATAG+TGG | - | chr5_4:29379170-29379189 | None:intergenic | 30.0% | |
| TTCACGAACATAAATAGTGA+TGG | + | chr5_4:29379179-29379198 | Msa0847410:intron | 30.0% | |
| GCATTTGTTCTTAGAAATCA+TGG | - | chr5_4:29379302-29379321 | None:intergenic | 30.0% | |
| TACTTCACTATCAATATCGT+TGG | + | chr5_4:29379440-29379459 | Msa0847410:intron | 30.0% | |
| TGGATGACATGAAAAAACTA+AGG | - | chr5_4:29379626-29379645 | None:intergenic | 30.0% | |
| TGATGTTACACTAGTTATTG+TGG | + | chr5_4:29379808-29379827 | Msa0847410:intron | 30.0% | |
| CTCTCTTGTGTTTATCATAA+AGG | + | chr5_4:29380006-29380025 | Msa0847410:intron | 30.0% | |
| CTCTTGTGTTTATCATAAAG+GGG | + | chr5_4:29380008-29380027 | Msa0847410:intron | 30.0% | |
| AGAACTAACATGCAATTTCT+AGG | - | chr5_4:29380082-29380101 | None:intergenic | 30.0% | |
| AAAGAATTACAGAATCACAG+TGG | + | chr5_4:29380180-29380199 | Msa0847410:intron | 30.0% | |
| !! | ATTTTGGGTCCCTAAAATTT+TGG | + | chr5_4:29380412-29380431 | Msa0847410:intron | 30.0% |
| ! | CAAAAGGAATCGTTTTCAAA+TGG | - | chr5_4:29380511-29380530 | None:intergenic | 30.0% |
| AACAAGACTAAGATCTCAAA+AGG | - | chr5_4:29380527-29380546 | None:intergenic | 30.0% | |
| ATGCTAAAAAGGAAGTTTCA+CGG | - | chr5_4:29380589-29380608 | None:intergenic | 30.0% | |
| TTGATCAACTCTTTCTTGAA+GGG | - | chr5_4:29380637-29380656 | None:intergenic | 30.0% | |
| TTTGATCAACTCTTTCTTGA+AGG | - | chr5_4:29380638-29380657 | None:intergenic | 30.0% | |
| ! | AGAGTTGATCAAAGCTATAT+TGG | + | chr5_4:29380645-29380664 | Msa0847410:intron | 30.0% |
| TCAGATAAGCAATGAAGTTA+CGG | - | chr5_4:29380873-29380892 | None:intergenic | 30.0% | |
| AATTCAAGCAACATCCATAT+TGG | - | chr5_4:29380905-29380924 | None:intergenic | 30.0% | |
| ! | AATATGGATGTTGCTTGAAT+TGG | + | chr5_4:29380904-29380923 | Msa0847410:intron | 30.0% |
| ATCCAATCAACTTATTTCAG+AGG | + | chr5_4:29380933-29380952 | Msa0847410:intron | 30.0% | |
| !!! | TTGATCTCTATTGATTTTCG+TGG | + | chr5_4:29380985-29381004 | Msa0847410:intron | 30.0% |
| ATATCAGTTATCAACTTACG+TGG | + | chr5_4:29381042-29381061 | Msa0847410:intron | 30.0% | |
| !!! | TAATTTGAGCTAGCTTTTAG+AGG | - | chr5_4:29381177-29381196 | None:intergenic | 30.0% |
| ATTAGAGTCTTACATTGTCA+GGG | - | chr5_4:29381242-29381261 | None:intergenic | 30.0% | |
| AATTAGAGTCTTACATTGTC+AGG | - | chr5_4:29381243-29381262 | None:intergenic | 30.0% | |
| CAGAGTTAAAAATGACAATG+TGG | - | chr5_4:29381315-29381334 | None:intergenic | 30.0% | |
| !!! | CATCCTTTGAGATTGTTTTT+GGG | - | chr5_4:29381373-29381392 | None:intergenic | 30.0% |
| !!! | TCATCCTTTGAGATTGTTTT+TGG | - | chr5_4:29381374-29381393 | None:intergenic | 30.0% |
| GAGCACATGAATATAAACAT+AGG | + | chr5_4:29381464-29381483 | Msa0847410:intron | 30.0% | |
| AATGGTGTCTTTCCATTATT+CGG | - | chr5_4:29381492-29381511 | None:intergenic | 30.0% | |
| ! | ATTTGAAGCATGATTGAGAA+TGG | - | chr5_4:29381510-29381529 | None:intergenic | 30.0% |
| TTCTCAATCATGCTTCAAAT+TGG | + | chr5_4:29381510-29381529 | Msa0847410:intron | 30.0% | |
| ! | AGCAAAGTCTAATAGTGTTT+TGG | + | chr5_4:29381678-29381697 | Msa0847410:intron | 30.0% |
| !!! | AGTGTTTTGGTGAATAATAG+AGG | + | chr5_4:29381691-29381710 | Msa0847410:intron | 30.0% |
| ATATTCTTTGCAGTTGCATA+CGG | + | chr5_4:29381719-29381738 | Msa0847410:intron | 30.0% | |
| CTAACTTAGTAAACACGAAT+TGG | + | chr5_4:29381859-29381878 | Msa0847410:intron | 30.0% | |
| TTTAGATCCTTATCTACGTT+AGG | + | chr5_4:29381905-29381924 | Msa0847410:intron | 30.0% | |
| !! | TGATATTTTAGAGACAAGGT+TGG | + | chr5_4:29381947-29381966 | Msa0847410:intron | 30.0% |
| !! | GATATTTTAGAGACAAGGTT+GGG | + | chr5_4:29381948-29381967 | Msa0847410:intron | 30.0% |
| AAAATAAAACCTGAGACCTA+AGG | - | chr5_4:29381983-29382002 | None:intergenic | 30.0% | |
| ! | GCTTTTCTGTTTTCTTTTTG+CGG | + | chr5_4:29382003-29382022 | Msa0847410:intron | 30.0% |
| ! | CTTTTCTGTTTTCTTTTTGC+GGG | + | chr5_4:29382004-29382023 | Msa0847410:intron | 30.0% |
| ! | TCTTCTATTTCTTCTCTTGA+TGG | - | chr5_4:29382366-29382385 | None:intergenic | 30.0% |
| AAGAGAAGAAATAGAAGATG+AGG | + | chr5_4:29382368-29382387 | Msa0847410:CDS | 30.0% | |
| ATAGAAGATGAGGTAATGAA+AGG | + | chr5_4:29382378-29382397 | Msa0847410:CDS | 30.0% | |
| !! | AGAAATCATTGATTCTTGGA+TGG | - | chr5_4:29382502-29382521 | None:intergenic | 30.0% |
| !! | GGTTAGAAATCATTGATTCT+TGG | - | chr5_4:29382506-29382525 | None:intergenic | 30.0% |
| TCAATGATTTCTAACCAGTT+TGG | + | chr5_4:29382510-29382529 | Msa0847410:CDS | 30.0% | |
| !!! | TCAATGTGGTATATTTTGGT+TGG | + | chr5_4:29382659-29382678 | Msa0847410:three_prime_UTR | 30.0% |
| CACATATTGGACTAATTAGA+GGG | - | chr5_4:29382719-29382738 | None:intergenic | 30.0% | |
| ACACATATTGGACTAATTAG+AGG | - | chr5_4:29382720-29382739 | None:intergenic | 30.0% | |
| !! | GCAAAAGTGTTTCATATGAC+TGG | + | chr5_4:29377299-29377318 | Msa0847410:CDS | 35.0% |
| ! | AAAGTGTTTCATATGACTGG+AGG | + | chr5_4:29377302-29377321 | Msa0847410:CDS | 35.0% |
| ! | AACCTGTAGTGAGGAATTTT+TGG | - | chr5_4:29377348-29377367 | None:intergenic | 35.0% |
| ! | GAAACAACACCAAAGAGTAT+AGG | + | chr5_4:29377509-29377528 | Msa0847410:CDS | 35.0% |
| !! | AGTATAGGCATTGCTGATTT+GGG | + | chr5_4:29377524-29377543 | Msa0847410:CDS | 35.0% |
| AGACTCTAAATTCAGTAGAG+TGG | - | chr5_4:29377631-29377650 | None:intergenic | 35.0% | |
| !! | TGGGTTTCCTTCCATTTTTA+TGG | + | chr5_4:29377739-29377758 | Msa0847410:CDS | 35.0% |
| !! | GGGTTTCCTTCCATTTTTAT+GGG | + | chr5_4:29377740-29377759 | Msa0847410:CDS | 35.0% |
| !! | TTTCCTTCCATTTTTATGGG+AGG | + | chr5_4:29377743-29377762 | Msa0847410:CDS | 35.0% |
| TAACCTCCCATAAAAATGGA+AGG | - | chr5_4:29377749-29377768 | None:intergenic | 35.0% | |
| GTCTTCCATAAAATGAACCA+GGG | - | chr5_4:29377772-29377791 | None:intergenic | 35.0% | |
| AGTCTTCCATAAAATGAACC+AGG | - | chr5_4:29377773-29377792 | None:intergenic | 35.0% | |
| TGAAAGCCAGTGTAAACTAT+GGG | - | chr5_4:29377831-29377850 | None:intergenic | 35.0% | |
| TTGAAAGCCAGTGTAAACTA+TGG | - | chr5_4:29377832-29377851 | None:intergenic | 35.0% | |
| !! | ATAGTTTACACTGGCTTTCA+AGG | + | chr5_4:29377831-29377850 | Msa0847410:CDS | 35.0% |
| !! | TAGTTTACACTGGCTTTCAA+GGG | + | chr5_4:29377832-29377851 | Msa0847410:CDS | 35.0% |
| ! | ATGAGTACTTTTAGTATCCG+TGG | + | chr5_4:29378073-29378092 | Msa0847410:intron | 35.0% |
| ! | TGAGTACTTTTAGTATCCGT+GGG | + | chr5_4:29378074-29378093 | Msa0847410:intron | 35.0% |
| !!! | TTTTTTCCCAAGTAGTCTAG+TGG | - | chr5_4:29378200-29378219 | None:intergenic | 35.0% |
| TTCTGTTCATCATAGATTGC+AGG | - | chr5_4:29378438-29378457 | None:intergenic | 35.0% | |
| ACAGAAAAGGTCTTTGAACA+AGG | + | chr5_4:29378452-29378471 | Msa0847410:CDS | 35.0% | |
| CAGAAAAGGTCTTTGAACAA+GGG | + | chr5_4:29378453-29378472 | Msa0847410:CDS | 35.0% | |
| AGGTCTGAAGAATTAGTTGT+TGG | + | chr5_4:29378567-29378586 | Msa0847410:CDS | 35.0% | |
| TCTGAAGAATTAGTTGTTGG+TGG | + | chr5_4:29378570-29378589 | Msa0847410:CDS | 35.0% | |
| ! | CTTACATTTCTAGGAAGAAG+AGG | + | chr5_4:29378603-29378622 | Msa0847410:CDS | 35.0% |
| CTGTGAGACTAGAATAGTAA+AGG | - | chr5_4:29378682-29378701 | None:intergenic | 35.0% | |
| CTTTACTATTCTAGTCTCAC+AGG | + | chr5_4:29378680-29378699 | Msa0847410:CDS | 35.0% | |
| TGACAGTCATACTTGATTGT+TGG | + | chr5_4:29378979-29378998 | Msa0847410:intron | 35.0% | |
| CTAATACAACCCCACAAAAT+CGG | - | chr5_4:29379061-29379080 | None:intergenic | 35.0% | |
| TGCTATCAGATTTCCGTTAT+CGG | + | chr5_4:29379138-29379157 | Msa0847410:intron | 35.0% | |
| ATAAATAGTGATGGTCGTGA+GGG | + | chr5_4:29379188-29379207 | Msa0847410:intron | 35.0% | |
| AAAAACCAGATTGTGAGGTA+AGG | - | chr5_4:29379259-29379278 | None:intergenic | 35.0% | |
| !!! | TACCTCACAATCTGGTTTTT+TGG | + | chr5_4:29379259-29379278 | Msa0847410:intron | 35.0% |
| TGTTACACTAGTTATTGTGG+TGG | + | chr5_4:29379811-29379830 | Msa0847410:intron | 35.0% | |
| ! | CTAGTTATTGTGGTGGTTTT+TGG | + | chr5_4:29379818-29379837 | Msa0847410:intron | 35.0% |
| ! | TCTCAAGAAAACGATTTTGC+TGG | + | chr5_4:29379930-29379949 | Msa0847410:intron | 35.0% |
| ! | CTCAAGAAAACGATTTTGCT+GGG | + | chr5_4:29379931-29379950 | Msa0847410:intron | 35.0% |
| ! | ATAAAGGGGAAATTCTAGAG+TGG | + | chr5_4:29380022-29380041 | Msa0847410:intron | 35.0% |
| ACAAGGCTCAATTATAGACT+GGG | - | chr5_4:29380478-29380497 | None:intergenic | 35.0% | |
| TACAAGGCTCAATTATAGAC+TGG | - | chr5_4:29380479-29380498 | None:intergenic | 35.0% | |
| TATAAATAACGTTGTTGGGC+TGG | + | chr5_4:29380764-29380783 | Msa0847410:intron | 35.0% | |
| !! | TGGTTGGTGTTAATGATTTG+AGG | + | chr5_4:29380796-29380815 | Msa0847410:intron | 35.0% |
| !! | AGCCTCTGAAATAAGTTGAT+TGG | - | chr5_4:29380938-29380957 | None:intergenic | 35.0% |
| AAAGCTAGCTCAAATTACGA+AGG | + | chr5_4:29381180-29381199 | Msa0847410:intron | 35.0% | |
| AAGCTAGCTCAAATTACGAA+GGG | + | chr5_4:29381181-29381200 | Msa0847410:intron | 35.0% | |
| ACTCCCAAAAACAATCTCAA+AGG | + | chr5_4:29381367-29381386 | Msa0847410:intron | 35.0% | |
| TAAACATAGGCTCCGAATAA+TGG | + | chr5_4:29381477-29381496 | Msa0847410:intron | 35.0% | |
| CACCTTATGAAAACCAAGAA+TGG | + | chr5_4:29381551-29381570 | Msa0847410:intron | 35.0% | |
| !! | GACCATTCTTGGTTTTCATA+AGG | - | chr5_4:29381556-29381575 | None:intergenic | 35.0% |
| GAAAACCAAGAATGGTCTAT+TGG | + | chr5_4:29381559-29381578 | Msa0847410:intron | 35.0% | |
| AAACACCAATAGACCATTCT+TGG | - | chr5_4:29381567-29381586 | None:intergenic | 35.0% | |
| TCAACCATAAGATAAAGCCT+AGG | - | chr5_4:29381624-29381643 | None:intergenic | 35.0% | |
| ! | TAGGCTTTATCTTATGGTTG+AGG | + | chr5_4:29381623-29381642 | Msa0847410:intron | 35.0% |
| CAAGTGAATTGTTGCAACTT+AGG | + | chr5_4:29381649-29381668 | Msa0847410:intron | 35.0% | |
| TGCAGTTCGTTAGATTTCAA+TGG | - | chr5_4:29381758-29381777 | None:intergenic | 35.0% | |
| !! | GGAGTGATATTTTAGAGACA+AGG | + | chr5_4:29381943-29381962 | Msa0847410:intron | 35.0% |
| ! | TGTTTTCTTTTTGCGGGTTT+AGG | + | chr5_4:29382010-29382029 | Msa0847410:intron | 35.0% |
| ATAAGATATCCCAACTAGGT+TGG | - | chr5_4:29382125-29382144 | None:intergenic | 35.0% | |
| AAGCAATGGAAAACATTACG+AGG | - | chr5_4:29382150-29382169 | None:intergenic | 35.0% | |
| AAGATGAGGTAATGAAAGGA+GGG | + | chr5_4:29382382-29382401 | Msa0847410:CDS | 35.0% | |
| GTCATTGAAATTAGAGAGGT+TGG | + | chr5_4:29382404-29382423 | Msa0847410:CDS | 35.0% | |
| ! | CCAAAATCTTTTCTCCAAAC+TGG | - | chr5_4:29382527-29382546 | None:intergenic | 35.0% |
| ! | CCAGTTTGGAGAAAAGATTT+TGG | + | chr5_4:29382524-29382543 | Msa0847410:CDS | 35.0% |
| !! | GGTTGATGAAGAAATTGCAA+AGG | + | chr5_4:29382575-29382594 | Msa0847410:CDS | 35.0% |
| TGATGAAGAAATTGCAAAGG+AGG | + | chr5_4:29382578-29382597 | Msa0847410:CDS | 35.0% | |
| AGAACAAGAACAAACGTGAT+GGG | - | chr5_4:29382612-29382631 | None:intergenic | 35.0% | |
| AAGAACAAGAACAAACGTGA+TGG | - | chr5_4:29382613-29382632 | None:intergenic | 35.0% | |
| CTTGTAGTTGTAGTATAGCT+AGG | + | chr5_4:29382766-29382785 | Msa0847410:three_prime_UTR | 35.0% | |
| TTTCATATGACTGGAGGAGT+TGG | + | chr5_4:29377308-29377327 | Msa0847410:CDS | 40.0% | |
| TGCCAAAAATTCCTCACTAC+AGG | + | chr5_4:29377343-29377362 | Msa0847410:CDS | 40.0% | |
| AAGAGAATGAACCTGTAGTG+AGG | - | chr5_4:29377357-29377376 | None:intergenic | 40.0% | |
| TCAGCAATGCCTATACTCTT+TGG | - | chr5_4:29377521-29377540 | None:intergenic | 40.0% | |
| ! | GAGTATAGGCATTGCTGATT+TGG | + | chr5_4:29377523-29377542 | Msa0847410:CDS | 40.0% |
| AGGGTAACCTCCCATAAAAA+TGG | - | chr5_4:29377753-29377772 | None:intergenic | 40.0% | |
| ! | ATTTTTATGGGAGGTTACCC+TGG | + | chr5_4:29377752-29377771 | Msa0847410:CDS | 40.0% |
| ! | GGTTACCCTGGTTCATTTTA+TGG | + | chr5_4:29377764-29377783 | Msa0847410:CDS | 40.0% |
| ATTCCTCCCATAGTTTACAC+TGG | + | chr5_4:29377822-29377841 | Msa0847410:CDS | 40.0% | |
| TGTTCATCATAGATTGCAGG+AGG | - | chr5_4:29378435-29378454 | None:intergenic | 40.0% | |
| ATGTGATAAAAGCCCTGAAG+TGG | + | chr5_4:29378488-29378507 | Msa0847410:CDS | 40.0% | |
| ATGCTTGAGAAACCACTTCA+GGG | - | chr5_4:29378503-29378522 | None:intergenic | 40.0% | |
| TATGCTTGAGAAACCACTTC+AGG | - | chr5_4:29378504-29378523 | None:intergenic | 40.0% | |
| AGCATACTCTAAGCAGTTTC+AGG | + | chr5_4:29378518-29378537 | Msa0847410:CDS | 40.0% | |
| TTTCCTTGTTCCTTCGATCA+AGG | + | chr5_4:29378547-29378566 | Msa0847410:CDS | 40.0% | |
| ATTCTTCAGACCTTGATCGA+AGG | - | chr5_4:29378560-29378579 | None:intergenic | 40.0% | |
| !! | ATCTCACAAGCCGATTTTGT+GGG | + | chr5_4:29379048-29379067 | Msa0847410:intron | 40.0% |
| ! | CGATTTTGTGGGGTTGTATT+AGG | + | chr5_4:29379059-29379078 | Msa0847410:intron | 40.0% |
| CGACAACGTCTAAGAAATAG+TGG | - | chr5_4:29379090-29379109 | None:intergenic | 40.0% | |
| TAGCACAATGGATCTTGAAG+AGG | - | chr5_4:29379116-29379135 | None:intergenic | 40.0% | |
| !! | GATAACGGAAATCTGATAGC+AGG | - | chr5_4:29379139-29379158 | None:intergenic | 40.0% |
| GCTATCAGATTTCCGTTATC+GGG | + | chr5_4:29379139-29379158 | Msa0847410:intron | 40.0% | |
| CTATCAGATTTCCGTTATCG+GGG | + | chr5_4:29379140-29379159 | Msa0847410:intron | 40.0% | |
| CATAAATAGTGATGGTCGTG+AGG | + | chr5_4:29379187-29379206 | Msa0847410:intron | 40.0% | |
| TAAATAGTGATGGTCGTGAG+GGG | + | chr5_4:29379189-29379208 | Msa0847410:intron | 40.0% | |
| CTCCAAAAAACCAGATTGTG+AGG | - | chr5_4:29379264-29379283 | None:intergenic | 40.0% | |
| GATGTACACAATTGGGGTAA+AGG | - | chr5_4:29379474-29379493 | None:intergenic | 40.0% | |
| ACATACAAGTCGTCCAAGTT+GGG | - | chr5_4:29379771-29379790 | None:intergenic | 40.0% | |
| ACGACTTGTATGTGCTATGT+GGG | + | chr5_4:29379778-29379797 | Msa0847410:intron | 40.0% | |
| !! | TTCTAGGATAGTGTGATCCA+TGG | - | chr5_4:29380066-29380085 | None:intergenic | 40.0% |
| ACAATAGGGAGAGTAGTAGA+GGG | - | chr5_4:29380260-29380279 | None:intergenic | 40.0% | |
| ! | TTGGGTCCCTAAAATTTTGG+AGG | + | chr5_4:29380415-29380434 | Msa0847410:intron | 40.0% |
| ! | GATGGGCCTCCAAAATTTTA+GGG | - | chr5_4:29380424-29380443 | None:intergenic | 40.0% |
| ! | AGATGGGCCTCCAAAATTTT+AGG | - | chr5_4:29380425-29380444 | None:intergenic | 40.0% |
| CAAATGGTGAAGTGAGTACA+AGG | - | chr5_4:29380495-29380514 | None:intergenic | 40.0% | |
| ATGATTTGAGGATTGCCCTA+TGG | + | chr5_4:29380808-29380827 | Msa0847410:intron | 40.0% | |
| TGATTTGAGGATTGCCCTAT+GGG | + | chr5_4:29380809-29380828 | Msa0847410:intron | 40.0% | |
| ! | TCTGAAGCTACGATCCAATA+TGG | + | chr5_4:29380888-29380907 | Msa0847410:intron | 40.0% |
| TTCAGAGGCTAAACAATCCA+CGG | + | chr5_4:29380948-29380967 | Msa0847410:intron | 40.0% | |
| ACAATGTGGAAATTGGACTC+AGG | - | chr5_4:29381301-29381320 | None:intergenic | 40.0% | |
| GTTGCAAAATGCATGGTTTC+AGG | - | chr5_4:29381602-29381621 | None:intergenic | 40.0% | |
| ! | AACCATGCATTTTGCAACCT+AGG | + | chr5_4:29381604-29381623 | Msa0847410:intron | 40.0% |
| ! | GCAACCTAGGCTTTATCTTA+TGG | + | chr5_4:29381617-29381636 | Msa0847410:intron | 40.0% |
| CTAAATTTGGAGAAAGGGAG+AGG | + | chr5_4:29381784-29381803 | Msa0847410:intron | 40.0% | |
| CATAAGGGAGCTTAGTTGAT+AGG | + | chr5_4:29381828-29381847 | Msa0847410:intron | 40.0% | |
| ATATCACTCCCTCTCCAATT+CGG | - | chr5_4:29381933-29381952 | None:intergenic | 40.0% | |
| AACCTGAGACCTAAGGAAAA+CGG | - | chr5_4:29381976-29381995 | None:intergenic | 40.0% | |
| AGGAAAAACTCTACAAGCGA+GGG | - | chr5_4:29382043-29382062 | None:intergenic | 40.0% | |
| AAGGAAAAACTCTACAAGCG+AGG | - | chr5_4:29382044-29382063 | None:intergenic | 40.0% | |
| ! | TTTTATGAGTATGGTGGCAG+AGG | + | chr5_4:29382077-29382096 | Msa0847410:intron | 40.0% |
| GGAGATAAGATATCCCAACT+AGG | - | chr5_4:29382129-29382148 | None:intergenic | 40.0% | |
| GAAGATGAGGTAATGAAAGG+AGG | + | chr5_4:29382381-29382400 | Msa0847410:CDS | 40.0% | |
| GAGGGTCATTGAAATTAGAG+AGG | + | chr5_4:29382400-29382419 | Msa0847410:CDS | 40.0% | |
| GACATAGATAAGAAGGAGCA+AGG | + | chr5_4:29382435-29382454 | Msa0847410:CDS | 40.0% | |
| CTATGGTACAGATGTTGCAA+AGG | + | chr5_4:29382467-29382486 | Msa0847410:CDS | 40.0% | |
| GTTTGAGAACTATGCAATGC+TGG | + | chr5_4:29382554-29382573 | Msa0847410:CDS | 40.0% | |
| GTAAGCGCAGTTACACATAT+TGG | - | chr5_4:29382732-29382751 | None:intergenic | 40.0% | |
| TGTAGTATAGCTAGGACTTC+AGG | + | chr5_4:29382774-29382793 | Msa0847410:three_prime_UTR | 40.0% | |
| GTAGTATAGCTAGGACTTCA+GGG | + | chr5_4:29382775-29382794 | Msa0847410:three_prime_UTR | 40.0% | |
| !! | GCTGATTTGGGATGTTCATC+TGG | + | chr5_4:29377536-29377555 | Msa0847410:CDS | 45.0% |
| AAGCCAGTGTAAACTATGGG+AGG | - | chr5_4:29377828-29377847 | None:intergenic | 45.0% | |
| ATCCGTGGGTTTAACTCAGA+TGG | + | chr5_4:29378088-29378107 | Msa0847410:intron | 45.0% | |
| TGCCATCTGAGTTAAACCCA+CGG | - | chr5_4:29378093-29378112 | None:intergenic | 45.0% | |
| TGCATAATATATGCAGGGGC+CGG | + | chr5_4:29378121-29378140 | Msa0847410:intron | 45.0% | |
| TTTCCCAAGTAGTCTAGTGG+CGG | - | chr5_4:29378197-29378216 | None:intergenic | 45.0% | |
| AGACCTTGATCGAAGGAACA+AGG | - | chr5_4:29378553-29378572 | None:intergenic | 45.0% | |
| TTGCCTCTGTCAACATGTTC+AGG | - | chr5_4:29378630-29378649 | None:intergenic | 45.0% | |
| ACAGAGGCAACTCTTTCTTC+TGG | + | chr5_4:29378640-29378659 | Msa0847410:CDS | 45.0% | |
| CAGAGGCAACTCTTTCTTCT+GGG | + | chr5_4:29378641-29378660 | Msa0847410:CDS | 45.0% | |
| !! | CAAAATCGGCTTGTGAGATG+AGG | - | chr5_4:29379047-29379066 | None:intergenic | 45.0% |
| !! | CATCTCACAAGCCGATTTTG+TGG | + | chr5_4:29379047-29379066 | Msa0847410:intron | 45.0% |
| !! | TCTCACAAGCCGATTTTGTG+GGG | + | chr5_4:29379049-29379068 | Msa0847410:intron | 45.0% |
| TCTGATAGCAGGTAGCACAA+TGG | - | chr5_4:29379128-29379147 | None:intergenic | 45.0% | |
| ! | ATAGTGGAATGCCCCGATAA+CGG | - | chr5_4:29379154-29379173 | None:intergenic | 45.0% |
| AAATAGTGATGGTCGTGAGG+GGG | + | chr5_4:29379190-29379209 | Msa0847410:intron | 45.0% | |
| GCAATCCTTACCTCACAATC+TGG | + | chr5_4:29379251-29379270 | Msa0847410:intron | 45.0% | |
| CATACAAGTCGTCCAAGTTG+GGG | - | chr5_4:29379770-29379789 | None:intergenic | 45.0% | |
| CACATACAAGTCGTCCAAGT+TGG | - | chr5_4:29379772-29379791 | None:intergenic | 45.0% | |
| GACGACTTGTATGTGCTATG+TGG | + | chr5_4:29379777-29379796 | Msa0847410:intron | 45.0% | |
| GACAATAGGGAGAGTAGTAG+AGG | - | chr5_4:29380261-29380280 | None:intergenic | 45.0% | |
| GCAGACAACTCAACAGAGAT+GGG | - | chr5_4:29380441-29380460 | None:intergenic | 45.0% | |
| TGCAGACAACTCAACAGAGA+TGG | - | chr5_4:29380442-29380461 | None:intergenic | 45.0% | |
| AGCAATCCACAGAACCCATA+GGG | - | chr5_4:29380826-29380845 | None:intergenic | 45.0% | |
| AGGACTCATGATAGGTGTGA+GGG | - | chr5_4:29381281-29381300 | None:intergenic | 45.0% | |
| TTGGACTCAGGACTCATGAT+AGG | - | chr5_4:29381289-29381308 | None:intergenic | 45.0% | |
| AGCCTAGGTTGCAAAATGCA+TGG | - | chr5_4:29381609-29381628 | None:intergenic | 45.0% | |
| !! | TTCGGTGCCTAACGTAGATA+AGG | - | chr5_4:29381915-29381934 | None:intergenic | 45.0% |
| !! | ATCTACGTTAGGCACCGAAT+TGG | + | chr5_4:29381916-29381935 | Msa0847410:intron | 45.0% |
| GGAAAAACTCTACAAGCGAG+GGG | - | chr5_4:29382042-29382061 | None:intergenic | 45.0% | |
| AGAGGATGGAGGTGATATCT+TGG | + | chr5_4:29382095-29382114 | Msa0847410:intron | 45.0% | |
| GAGGATGGAGGTGATATCTT+GGG | + | chr5_4:29382096-29382115 | Msa0847410:intron | 45.0% | |
| AGGATGGAGGTGATATCTTG+GGG | + | chr5_4:29382097-29382116 | Msa0847410:intron | 45.0% | |
| TAGATAAGAAGGAGCAAGGC+AGG | + | chr5_4:29382439-29382458 | Msa0847410:CDS | 45.0% | |
| AGATAAGAAGGAGCAAGGCA+GGG | + | chr5_4:29382440-29382459 | Msa0847410:CDS | 45.0% | |
| !!! | ATACAAAAAAAAAATTATTT+TGG | + | chr5_4:29380396-29380415 | Msa0847410:intron | 5.0% |
| !!! | TACAAAAAAAAAATTATTTT+GGG | + | chr5_4:29380397-29380416 | Msa0847410:intron | 5.0% |
| GCATAATATATGCAGGGGCC+GGG | + | chr5_4:29378122-29378141 | Msa0847410:intron | 50.0% | |
| ! | ATATGGAGAAGTGGGGTGTC+CGG | - | chr5_4:29378157-29378176 | None:intergenic | 50.0% |
| GGACCTGAACATGTTGACAG+AGG | + | chr5_4:29378624-29378643 | Msa0847410:CDS | 50.0% | |
| !! | GGAAATTCTAGAGTGGACCC+TGG | + | chr5_4:29380029-29380048 | Msa0847410:intron | 50.0% |
| GTGTGATCCATGGTGAAGAG+TGG | - | chr5_4:29380056-29380075 | None:intergenic | 50.0% | |
| ! | GTTGAGTTGTCTGCATCCCA+AGG | + | chr5_4:29380447-29380466 | Msa0847410:intron | 50.0% |
| GTTGTCTGCATCCCAAGGAT+CGG | + | chr5_4:29380452-29380471 | Msa0847410:intron | 50.0% | |
| TATAGACTGGGCCGATCCTT+GGG | - | chr5_4:29380466-29380485 | None:intergenic | 50.0% | |
| TTATAGACTGGGCCGATCCT+TGG | - | chr5_4:29380467-29380486 | None:intergenic | 50.0% | |
| GAGCAATCCACAGAACCCAT+AGG | - | chr5_4:29380827-29380846 | None:intergenic | 50.0% | |
| CAATTGCACTATGCGTTCCG+TGG | - | chr5_4:29380968-29380987 | None:intergenic | 50.0% | |
| CAGGACTCATGATAGGTGTG+AGG | - | chr5_4:29381282-29381301 | None:intergenic | 50.0% | |
| !! | GTTAGGCACCGAATTGGAGA+GGG | + | chr5_4:29381922-29381941 | Msa0847410:intron | 50.0% |
| ! | CTCCGTTTTCCTTAGGTCTC+AGG | + | chr5_4:29381971-29381990 | Msa0847410:intron | 50.0% |
| ATGAGTATGGTGGCAGAGGA+TGG | + | chr5_4:29382081-29382100 | Msa0847410:intron | 50.0% | |
| ! | TATGGAGAAGTGGGGTGTCC+GGG | - | chr5_4:29378156-29378175 | None:intergenic | 55.0% |
| CTGCCGCCACTAGACTACTT+GGG | + | chr5_4:29378191-29378210 | Msa0847410:intron | 55.0% | |
| ! | TCGTCCAAGTTGGGGTCAGA+GGG | - | chr5_4:29379762-29379781 | None:intergenic | 55.0% |
| CCATGGTGAAGAGTGGTCCA+GGG | - | chr5_4:29380049-29380068 | None:intergenic | 55.0% | |
| TCCATGGTGAAGAGTGGTCC+AGG | - | chr5_4:29380050-29380069 | None:intergenic | 55.0% | |
| ! | TGTTGGGCTGGACGCTTCTT+TGG | + | chr5_4:29380776-29380795 | Msa0847410:intron | 55.0% |
| GGATTGCCCTATGGGTTCTG+TGG | + | chr5_4:29380817-29380836 | Msa0847410:intron | 55.0% | |
| !! | CGTTAGGCACCGAATTGGAG+AGG | + | chr5_4:29381921-29381940 | Msa0847410:intron | 55.0% |
| ! | GGTTGGGCTCCGTTTTCCTT+AGG | + | chr5_4:29381964-29381983 | Msa0847410:intron | 55.0% |
| ACTCTACAAGCGAGGGGACT+GGG | - | chr5_4:29382036-29382055 | None:intergenic | 55.0% | |
| AACTCTACAAGCGAGGGGAC+TGG | - | chr5_4:29382037-29382056 | None:intergenic | 55.0% | |
| AGTATGGTGGCAGAGGATGG+AGG | + | chr5_4:29382084-29382103 | Msa0847410:intron | 55.0% | |
| ! | TCTTGGGGTGCCAACCTAGT+TGG | + | chr5_4:29382112-29382131 | Msa0847410:intron | 55.0% |
| ! | CTTGGGGTGCCAACCTAGTT+GGG | + | chr5_4:29382113-29382132 | Msa0847410:intron | 55.0% |
| ! | ATGGAGAAGTGGGGTGTCCG+GGG | - | chr5_4:29378155-29378174 | None:intergenic | 60.0% |
| GCTGCCGCCACTAGACTACT+TGG | + | chr5_4:29378190-29378209 | Msa0847410:intron | 60.0% | |
| TGGTCCCTCTGACCCCAACT+TGG | + | chr5_4:29379755-29379774 | Msa0847410:intron | 60.0% | |
| ! | GTCGTCCAAGTTGGGGTCAG+AGG | - | chr5_4:29379763-29379782 | None:intergenic | 60.0% |
| CCCTGGACCACTCTTCACCA+TGG | + | chr5_4:29380046-29380065 | Msa0847410:intron | 60.0% | |
| GGGCTGGACGCTTCTTTGGT+TGG | + | chr5_4:29380780-29380799 | Msa0847410:intron | 60.0% | |
| GAGCAAGGCAGGGAGAGCTA+TGG | + | chr5_4:29382450-29382469 | Msa0847410:CDS | 60.0% | |
| GGTGTCCGGGGTTCGAAACC+CGG | - | chr5_4:29378143-29378162 | None:intergenic | 65.0% | |
| AGGGGCCGGGTTTCGAACCC+CGG | + | chr5_4:29378135-29378154 | Msa0847410:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 29377262 | 29382800 | 29377262 | ID=Msa0847410;Name=Msa0847410 |
| chr5_4 | mRNA | 29377262 | 29382800 | 29377262 | ID=Msa0847410-mRNA-1;Parent=Msa0847410;Name=Msa0847410-mRNA-1;_AED=0.09;_eAED=0.09;_QI=28|1|1|1|1|1|4|156|361 |
| chr5_4 | exon | 29377262 | 29377364 | 29377262 | ID=Msa0847410-mRNA-1:exon:10890;Parent=Msa0847410-mRNA-1 |
| chr5_4 | exon | 29377449 | 29377853 | 29377449 | ID=Msa0847410-mRNA-1:exon:10891;Parent=Msa0847410-mRNA-1 |
| chr5_4 | exon | 29378429 | 29378701 | 29378429 | ID=Msa0847410-mRNA-1:exon:10892;Parent=Msa0847410-mRNA-1 |
| chr5_4 | exon | 29382312 | 29382800 | 29382312 | ID=Msa0847410-mRNA-1:exon:10893;Parent=Msa0847410-mRNA-1 |
| chr5_4 | five_prime_UTR | 29377262 | 29377289 | 29377262 | ID=Msa0847410-mRNA-1:five_prime_utr;Parent=Msa0847410-mRNA-1 |
| chr5_4 | CDS | 29377290 | 29377364 | 29377290 | ID=Msa0847410-mRNA-1:cds;Parent=Msa0847410-mRNA-1 |
| chr5_4 | CDS | 29377449 | 29377853 | 29377449 | ID=Msa0847410-mRNA-1:cds;Parent=Msa0847410-mRNA-1 |
| chr5_4 | CDS | 29378429 | 29378701 | 29378429 | ID=Msa0847410-mRNA-1:cds;Parent=Msa0847410-mRNA-1 |
| chr5_4 | CDS | 29382312 | 29382644 | 29382312 | ID=Msa0847410-mRNA-1:cds;Parent=Msa0847410-mRNA-1 |
| chr5_4 | three_prime_UTR | 29382645 | 29382800 | 29382645 | ID=Msa0847410-mRNA-1:three_prime_utr;Parent=Msa0847410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
