AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0520270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520270 MtrunA17_Chr3g0135861 98.834 343 4 0 1 343 1 343 0.0 699
Msa0520270 MtrunA17_Chr6g0488081 55.063 316 135 3 21 336 5 313 5.79e-124 358
Msa0520270 MtrunA17_Chr6g0488341 47.909 263 109 4 74 336 4 238 9.47e-80 243
Msa0520270 MtrunA17_Chr6g0463041 49.398 249 105 3 107 336 1 247 3.23e-79 242
Msa0520270 MtrunA17_Chr5g0396801 38.272 324 156 8 33 331 36 340 4.41e-65 209
Msa0520270 MtrunA17_Chr8g0347451 35.180 361 182 11 3 331 15 355 1.36e-60 198
Msa0520270 MtrunA17_Chr7g0240341 33.856 319 164 10 32 329 22 314 1.87e-47 162
Msa0520270 MtrunA17_Chr7g0240341 26.360 239 142 10 116 341 11 228 7.07e-12 65.5
Msa0520270 MtrunA17_Chr8g0385571 32.459 305 171 8 35 331 227 504 1.26e-46 165
Msa0520270 MtrunA17_Chr7g0252401 32.459 305 168 7 35 331 207 481 2.54e-45 161
Msa0520270 MtrunA17_Chr1g0149111 32.237 304 171 8 32 329 136 410 1.09e-44 158
Msa0520270 MtrunA17_Chr1g0149111 28.972 214 131 4 14 227 215 407 1.70e-19 89.0
Msa0520270 MtrunA17_Chr3g0131501 31.494 308 174 8 33 331 203 482 2.53e-43 155
Msa0520270 MtrunA17_Chr3g0131501 27.184 206 122 5 35 233 299 483 2.41e-16 79.7
Msa0520270 MtrunA17_Chr3g0137941 31.023 303 176 7 32 329 119 393 5.28e-42 150
Msa0520270 MtrunA17_Chr3g0137941 30.841 214 127 3 14 227 198 390 2.72e-21 94.0
Msa0520270 MtrunA17_Chr2g0296061 27.914 326 184 6 37 329 17 324 2.09e-41 147
Msa0520270 MtrunA17_Chr2g0296061 26.570 207 134 5 129 328 13 208 2.59e-16 78.6
Msa0520270 MtrunA17_Chr5g0436041 33.123 317 169 8 32 330 31 322 9.24e-41 145
Msa0520270 MtrunA17_Chr5g0436041 30.374 214 130 3 19 232 129 323 4.34e-16 78.2
Msa0520270 MtrunA17_Chr4g0006851 32.877 292 157 7 46 330 100 359 1.73e-40 146
Msa0520270 MtrunA17_Chr4g0006851 27.333 150 97 3 194 342 140 278 1.80e-13 70.9
Msa0520270 MtrunA17_Chr4g0063561 30.368 326 190 9 11 329 99 394 3.54e-40 145
Msa0520270 MtrunA17_Chr3g0135801 30.631 333 196 9 14 331 11 323 8.35e-40 143
Msa0520270 MtrunA17_Chr4g0067231 27.576 330 182 7 37 329 16 325 1.21e-38 140
Msa0520270 MtrunA17_Chr4g0067231 28.571 210 128 7 129 328 12 209 3.53e-18 84.0
Msa0520270 MtrunA17_Chr7g0242311 29.617 287 165 4 46 326 98 353 2.72e-36 135
Msa0520270 MtrunA17_Chr7g0242311 28.000 150 96 3 194 342 138 276 2.03e-15 76.6
Msa0520270 MtrunA17_Chr6g0488171 53.153 111 50 1 226 336 1 109 3.31e-36 127
Msa0520270 MtrunA17_Chr4g0000261 27.327 333 184 11 32 340 63 361 8.55e-30 117
Msa0520270 MtrunA17_Chr3g0088301 30.769 312 176 11 31 326 89 376 6.85e-29 115
Msa0520270 MtrunA17_Chr8g0393031 31.186 295 160 11 33 309 16 285 1.43e-28 112
Msa0520270 MtrunA17_Chr7g0269701 26.316 304 192 8 37 329 24 306 1.02e-27 110
Msa0520270 MtrunA17_Chr8g0352031 30.547 311 179 9 31 326 64 352 9.71e-27 108
Msa0520270 MtrunA17_Chr8g0382201 28.000 325 175 9 33 331 193 484 3.08e-26 108
Msa0520270 MtrunA17_Chr2g0328891 30.476 315 179 11 31 329 62 352 3.75e-26 107
Msa0520270 MtrunA17_Chr1g0195101 27.027 296 180 11 47 329 31 303 5.15e-25 103
Msa0520270 MtrunA17_Chr1g0195101 27.957 186 116 5 147 330 35 204 1.32e-12 67.8
Msa0520270 MtrunA17_Chr4g0040341 29.524 315 176 11 31 326 71 358 5.13e-24 101
Msa0520270 MtrunA17_Chr4g0004571 28.188 298 184 8 33 324 14 287 3.07e-23 97.8
Msa0520270 MtrunA17_Chr4g0004571 25.943 212 129 6 21 224 95 286 8.48e-11 62.0
Msa0520270 MtrunA17_Chr5g0423111 26.014 296 183 8 47 329 33 305 3.45e-23 98.6
Msa0520270 MtrunA17_Chr3g0115801 26.361 349 202 9 6 331 89 405 3.79e-23 99.4
Msa0520270 MtrunA17_Chr8g0366791 28.431 306 197 7 33 330 7 298 1.32e-22 96.3
Msa0520270 MtrunA17_Chr5g0436571 28.028 289 185 8 51 319 24 309 1.39e-21 94.0
Msa0520270 MtrunA17_Chr5g0411411 27.451 306 200 7 33 330 7 298 9.97e-21 90.9
Msa0520270 MtrunA17_Chr3g0086811 25.680 331 216 8 16 326 8 328 1.23e-18 85.9
Msa0520270 MtrunA17_Chr7g0275411 27.509 269 169 10 70 326 78 332 1.17e-16 79.7
Msa0520270 MtrunA17_Chr8g0386871 23.920 301 184 7 36 327 321 585 2.74e-16 80.1
Msa0520270 MtrunA17_Chr4g0008061 24.503 302 196 6 37 328 17 296 2.98e-16 78.2
Msa0520270 MtrunA17_Chr8g0372531 23.368 291 184 9 51 323 30 299 1.07e-15 76.6
Msa0520270 MtrunA17_Chr1g0201361 24.062 320 196 8 20 335 36 312 1.83e-15 76.3
Msa0520270 MtrunA17_Chr6g0488301 38.462 104 21 1 226 329 1 61 2.92e-15 70.1
Msa0520270 MtrunA17_Chr3g0126331 26.007 273 179 8 66 326 123 384 6.77e-15 75.1
Msa0520270 MtrunA17_Chr6g0463351 27.240 279 158 8 51 318 83 327 9.30e-15 74.3
Msa0520270 MtrunA17_Chr6g0463351 25.366 205 131 3 36 236 161 347 1.43e-13 70.9
Msa0520270 MtrunA17_Chr2g0331771 25.333 300 191 10 33 324 154 428 2.39e-14 73.6
Msa0520270 MtrunA17_Chr1g0196921 21.290 310 209 9 34 331 13 299 2.66e-14 72.4
Msa0520270 MtrunA17_Chr8g0383321 24.116 311 191 8 21 329 38 305 6.76e-14 71.6
Msa0520270 MtrunA17_Chr5g0431531 26.452 310 187 8 31 329 35 314 1.07e-13 70.9
Msa0520270 MtrunA17_Chr3g0103681 22.654 309 202 9 31 326 11 295 2.96e-13 69.3
Msa0520270 MtrunA17_Chr7g0241521 22.903 310 205 8 31 329 13 299 1.15e-12 67.8
Msa0520270 MtrunA17_Chr2g0293621 24.671 304 190 9 51 337 45 326 1.72e-12 67.4
Msa0520270 MtrunA17_Chr4g0046981 22.830 311 210 6 33 331 10 302 4.15e-12 66.2
Msa0520270 MtrunA17_Chr7g0219891 29.189 185 101 6 146 322 36 198 1.24e-11 64.7
Msa0520270 MtrunA17_Chr6g0488161 40.741 81 37 1 21 90 5 85 1.93e-11 59.7
Msa0520270 MtrunA17_Chr4g0028531 25.633 316 195 14 21 323 9 297 4.16e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520270 AT1G14560.1 64.118 340 109 3 1 338 1 329 2.01e-146 416
Msa0520270 AT1G14560.2 64.856 313 97 3 1 311 1 302 3.36e-132 379
Msa0520270 AT4G26180.1 55.732 314 133 3 26 339 12 319 2.99e-126 365
Msa0520270 AT4G26180.2 55.944 286 120 3 26 311 12 291 6.92e-114 332
Msa0520270 AT1G14560.3 65.812 234 75 2 107 338 1 231 5.01e-110 320
Msa0520270 AT4G01100.1 36.697 327 159 8 33 331 40 346 2.83e-60 197
Msa0520270 AT4G01100.2 33.067 375 182 10 2 331 10 360 6.36e-57 189
Msa0520270 AT4G01100.3 35.556 315 157 7 44 331 1 296 6.19e-56 184
Msa0520270 AT4G01100.3 27.363 201 130 6 37 227 97 291 1.11e-14 73.9
Msa0520270 AT2G37890.1 33.125 320 171 9 33 334 43 337 3.57e-49 168
Msa0520270 AT2G37890.1 29.949 197 121 4 32 227 149 329 1.40e-20 91.7
Msa0520270 AT2G37890.1 29.870 231 133 9 121 341 35 246 1.48e-14 73.9
Msa0520270 AT3G53940.1 33.333 321 171 9 32 334 70 365 9.17e-49 167
Msa0520270 AT3G55640.1 32.797 311 172 8 34 329 37 325 8.61e-48 164
Msa0520270 AT3G55640.4 32.797 311 172 8 34 329 37 325 8.61e-48 164
Msa0520270 AT5G61810.2 30.921 304 163 7 33 326 63 329 4.13e-42 149
Msa0520270 AT5G61810.2 26.768 198 122 3 35 230 156 332 3.16e-15 75.9
Msa0520270 AT5G48970.1 27.964 329 183 6 37 329 24 334 4.60e-41 147
Msa0520270 AT5G48970.1 27.273 209 132 5 129 329 20 216 4.72e-18 84.3
Msa0520270 AT3G21390.1 29.091 330 177 7 37 329 21 330 4.67e-41 147
Msa0520270 AT3G21390.1 29.469 207 126 5 129 328 17 210 1.13e-19 89.0
Msa0520270 AT5G61810.1 30.744 309 167 7 33 331 206 477 5.13e-41 150
Msa0520270 AT5G51050.1 29.236 301 179 5 35 329 223 495 5.76e-41 150
Msa0520270 AT4G32400.1 32.131 305 170 8 32 329 111 385 5.97e-41 148
Msa0520270 AT4G32400.1 27.830 212 134 3 26 237 200 392 5.91e-17 81.6
Msa0520270 AT3G21390.2 29.091 330 177 7 37 329 43 352 6.76e-41 147
Msa0520270 AT3G21390.2 29.469 207 126 5 129 328 39 232 1.68e-19 88.6
Msa0520270 AT3G51870.1 30.743 296 168 4 46 335 102 366 1.09e-39 144
Msa0520270 AT3G51870.1 27.638 199 120 5 145 342 105 280 4.02e-14 73.2
Msa0520270 AT5G56450.1 30.380 316 183 7 31 329 30 325 1.41e-37 137
Msa0520270 AT5G48970.2 29.181 281 159 5 71 329 1 263 1.83e-37 135
Msa0520270 AT5G07320.1 29.452 292 161 8 44 326 218 473 2.55e-37 140
Msa0520270 AT5G07320.1 31.658 199 111 6 35 230 300 476 2.48e-17 83.2
Msa0520270 AT5G01500.1 30.795 302 166 6 46 338 130 397 1.13e-36 137
Msa0520270 AT5G01500.1 28.426 197 119 4 144 339 132 307 1.98e-15 77.4
Msa0520270 AT3G55640.2 31.624 234 129 5 34 254 37 252 1.38e-31 119
Msa0520270 AT3G55640.2 26.577 222 134 6 130 341 37 239 7.77e-15 73.9
Msa0520270 AT3G55640.3 31.624 234 129 5 34 254 37 252 1.38e-31 119
Msa0520270 AT3G55640.3 26.577 222 134 6 130 341 37 239 7.77e-15 73.9
Msa0520270 AT3G53940.2 33.054 239 123 7 32 254 70 287 3.01e-31 119
Msa0520270 AT3G53940.2 30.493 223 126 8 131 343 73 276 7.15e-16 77.4
Msa0520270 AT3G20240.1 26.814 317 179 8 33 326 50 336 6.11e-31 120
Msa0520270 AT2G47490.1 29.085 306 178 11 47 337 29 310 3.30e-29 114
Msa0520270 AT2G47490.1 29.897 194 119 5 138 330 24 201 2.25e-12 67.4
Msa0520270 AT5G13490.1 30.619 307 178 10 34 326 87 372 1.09e-26 109
Msa0520270 AT5G13490.2 30.619 307 178 10 34 326 87 372 1.09e-26 109
Msa0520270 AT1G25380.1 28.013 307 185 10 47 339 33 317 1.21e-26 108
Msa0520270 AT1G25380.2 28.013 307 185 10 47 339 33 317 1.21e-26 108
Msa0520270 AT5G64970.1 28.308 325 174 11 33 331 133 424 1.44e-26 109
Msa0520270 AT4G28390.1 30.968 310 178 11 31 326 79 366 1.72e-26 108
Msa0520270 AT4G28390.2 30.968 310 178 11 31 326 79 366 1.72e-26 108
Msa0520270 AT5G17400.1 30.503 318 167 12 31 325 10 296 5.03e-26 105
Msa0520270 AT3G08580.2 29.808 312 180 10 31 326 80 368 7.00e-26 107
Msa0520270 AT3G08580.1 29.808 312 180 10 31 326 80 368 7.00e-26 107
Msa0520270 AT5G64970.2 27.500 320 173 11 38 331 14 300 4.48e-24 100
Msa0520270 AT4G11440.1 29.114 316 185 10 39 343 330 617 5.86e-23 100
Msa0520270 AT4G11440.2 29.114 316 185 10 39 343 330 617 5.86e-23 100
Msa0520270 AT1G78180.1 28.528 326 172 11 33 331 126 417 1.13e-22 98.6
Msa0520270 AT5G66380.1 25.949 316 198 9 37 336 12 307 2.71e-20 90.1
Msa0520270 AT5G64970.3 27.547 265 140 9 32 270 132 370 3.27e-19 88.2
Msa0520270 AT5G46800.2 27.451 306 203 7 33 330 6 300 6.52e-19 86.3
Msa0520270 AT5G46800.3 27.451 306 203 7 33 330 6 300 6.52e-19 86.3
Msa0520270 AT5G46800.1 27.451 306 203 7 33 330 6 300 6.52e-19 86.3
Msa0520270 AT1G74240.1 25.740 338 227 7 2 326 7 333 7.19e-19 87.0
Msa0520270 AT1G14140.1 24.430 307 202 8 35 331 16 302 9.62e-19 85.9
Msa0520270 AT5G58970.1 25.325 308 194 9 31 326 12 295 1.01e-18 85.9
Msa0520270 AT2G39970.1 26.441 295 184 9 51 319 24 311 5.76e-15 75.1
Msa0520270 AT4G03115.1 22.222 324 215 7 15 331 18 311 8.21e-15 74.7
Msa0520270 AT2G30160.1 25.407 307 190 8 35 329 42 321 8.55e-15 74.7
Msa0520270 AT4G39460.2 25.672 335 195 10 1 329 25 311 1.03e-14 74.3
Msa0520270 AT4G39460.1 25.672 335 195 10 1 329 25 311 1.03e-14 74.3
Msa0520270 AT4G39460.3 25.672 335 195 10 1 329 25 311 1.03e-14 74.3
Msa0520270 AT4G03115.3 22.222 324 215 7 15 331 50 343 1.11e-14 74.7
Msa0520270 AT1G79900.1 26.071 280 168 9 51 324 32 278 1.43e-14 73.6
Msa0520270 AT2G33820.1 24.204 314 206 8 31 331 14 308 1.49e-14 73.9
Msa0520270 AT1G74240.2 26.316 266 179 4 71 326 27 285 1.58e-14 73.9
Msa0520270 AT1G34065.1 24.611 321 191 10 19 335 68 341 5.84e-14 72.4
Msa0520270 AT1G34065.1 28.019 207 124 6 32 237 160 342 2.53e-12 67.4
Msa0520270 AT1G34065.2 24.611 321 191 10 19 335 61 334 6.91e-14 72.0
Msa0520270 AT1G34065.2 27.273 209 123 5 32 237 153 335 2.62e-12 67.4
Msa0520270 AT5G42130.1 24.312 218 143 3 23 236 200 399 3.03e-13 70.5
Msa0520270 AT5G42130.1 27.143 280 172 7 48 322 131 383 1.31e-11 65.9
Msa0520270 AT4G03115.2 28.804 184 104 4 144 326 51 208 3.37e-13 68.6
Msa0520270 AT4G03115.4 28.877 187 106 4 144 329 51 211 4.70e-13 68.2
Msa0520270 AT4G03115.5 22.692 260 166 6 77 331 11 240 4.90e-13 68.6
Msa0520270 AT4G27940.1 24.910 277 176 9 66 326 144 404 5.21e-13 70.1
Msa0520270 AT1G07030.1 24.490 196 123 3 131 326 40 210 5.29e-13 69.3
Msa0520270 AT1G07030.1 25.081 307 188 8 35 329 40 316 1.21e-11 65.5
Msa0520270 AT4G03115.6 22.692 260 166 6 77 331 19 248 6.21e-13 68.2
Msa0520270 AT1G72820.1 24.013 304 180 7 57 326 49 335 7.57e-13 68.9
Msa0520270 AT1G72820.2 24.013 304 180 7 57 326 49 335 7.57e-13 68.9
Msa0520270 AT2G33820.3 23.602 322 206 9 31 331 14 316 4.97e-12 66.2
Msa0520270 AT3G54110.1 22.654 309 203 9 33 329 13 297 7.42e-12 65.9
Msa0520270 AT2G46320.1 24.528 265 164 9 77 326 109 352 4.78e-11 63.9

Find 128 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTGTAAGTTTATATTATT+TGG 0.113461 3_4:-72802023 Msa0520270:three_prime_UTR
TTTCAAAACGGTGGCGTTTA+AGG 0.129499 3_4:+72806693 None:intergenic
ACGAACTCCAGCTTCTTTAT+AGG 0.187276 3_4:+72804280 None:intergenic
TCATCAGGTCCAACCCTTAC+TGG 0.241628 3_4:-72803812 Msa0520270:intron
CCGTACCAAACTTGCTTATC+AGG 0.253158 3_4:-72804935 Msa0520270:intron
GGAGCTCTTGCTGGATTGTT+TGG 0.263281 3_4:-72803689 Msa0520270:CDS
CTTTCTTGTGGAGCTCTTGC+TGG 0.277059 3_4:-72803698 Msa0520270:CDS
ACTGTAAGTTTATATTATTT+GGG 0.278234 3_4:-72802022 Msa0520270:three_prime_UTR
TCTCTTTCCTTAGAAGTAGA+TGG 0.284343 3_4:-72806572 Msa0520270:five_prime_UTR
ATGCATGGTATTTGCTTGTT+TGG 0.303656 3_4:-72801962 Msa0520270:three_prime_UTR
TTAATTGCTGGTGGATTTGC+TGG 0.304100 3_4:-72806384 Msa0520270:CDS
CGTTATCCCATCTACTTCTA+AGG 0.310537 3_4:+72806565 None:intergenic
ATGGACTTCTGATGTTCTTC+AGG 0.313245 3_4:+72803731 None:intergenic
TTTGGTACGGGCAAGATCTA+AGG 0.328897 3_4:+72804948 None:intergenic
GGGTGGAGGCAGTTGTTTGC+AGG 0.333389 3_4:-72803536 Msa0520270:CDS
CTTTACCTGATAAGCAAGTT+TGG 0.338336 3_4:+72804930 None:intergenic
CCTGTACATAATGGCATTAA+AGG 0.342412 3_4:-72804317 Msa0520270:CDS
TTCAAAACGGTGGCGTTTAA+GGG 0.354856 3_4:+72806694 None:intergenic
AAGTCTCGATCAGTTTCTTC+AGG 0.364975 3_4:-72802404 Msa0520270:CDS
GAGCTCTTGCTGGATTGTTT+GGG 0.366817 3_4:-72803688 Msa0520270:CDS
CTAACATGGGATAATTGTTC+AGG 0.368987 3_4:+72805040 None:intergenic
AGATTCTAGATTGGCTGGTT+TGG 0.369557 3_4:-72806472 Msa0520270:CDS
ATTAACTCCTTAACATAAAC+AGG 0.374841 3_4:+72806402 None:intergenic
ACCATCTTTGATACATCCTT+TGG 0.378479 3_4:+72804370 None:intergenic
AGCCTGCAAAATGGAGCTAA+TGG 0.389932 3_4:-72803614 Msa0520270:CDS
ACCGGTGGATTTCATAATCT+TGG 0.391806 3_4:-72805288 Msa0520270:CDS
GGCGTTTAAGGGAGGAGAAC+GGG 0.394127 3_4:+72806705 None:intergenic
CTGAACAATTATCCCATGTT+AGG 0.395653 3_4:-72805039 Msa0520270:CDS
AGGAAGATTGTTCGAAATCA+AGG 0.399175 3_4:-72803557 Msa0520270:CDS
TTCTGTTGCGCCTCTCGAAC+GGG 0.399548 3_4:-72806346 Msa0520270:CDS
TCGCGTTCCTGTTTATGTTA+AGG 0.399683 3_4:-72806409 Msa0520270:CDS
GAGCTTCAAAGTGGATAGAT+TGG 0.403936 3_4:-72806534 Msa0520270:five_prime_UTR
TTCATTATTTCTTAATCCTT+AGG 0.412799 3_4:-72802184 Msa0520270:three_prime_UTR
TTCTTCTCAAGATTCTAGAT+TGG 0.416611 3_4:-72806481 Msa0520270:CDS
ACTGGAATTCTTCCATATGC+TGG 0.417730 3_4:-72803794 Msa0520270:CDS
ATAAACCTAAAACCAAAGTT+AGG 0.418539 3_4:-72806742 None:intergenic
GCGTAAGCATTAACTACATA+AGG 0.418832 3_4:-72803514 Msa0520270:CDS
TCTCAAGATTCTAGATTGGC+TGG 0.421380 3_4:-72806477 Msa0520270:CDS
TTCACTAGGATTAATATGTC+AGG 0.426068 3_4:-72802112 Msa0520270:three_prime_UTR
GCAGACTTTAACATACCCTT+TGG 0.432131 3_4:-72803666 Msa0520270:CDS
TTGTGAAGTGTGATATCATT+TGG 0.440521 3_4:-72802228 Msa0520270:three_prime_UTR
GAATGGCGTATACTCAGAAT+TGG 0.441268 3_4:+72806593 None:intergenic
TAGAACTTTAAACCAGCATA+TGG 0.441645 3_4:+72803782 None:intergenic
TATGTTAAGGAGTTAATTGC+TGG 0.446548 3_4:-72806396 Msa0520270:CDS
TGCATTCTAATTAGGCGTAC+AGG 0.447979 3_4:-72802070 Msa0520270:three_prime_UTR
AAAATACATTTGATGGGCTT+AGG 0.448754 3_4:-72803577 Msa0520270:CDS
CTCTTTCCTTAGAAGTAGAT+GGG 0.450157 3_4:-72806571 Msa0520270:five_prime_UTR
TTAAGAGACAAATGCAGGTT+GGG 0.457586 3_4:-72803637 Msa0520270:CDS
TTAGCAACTTATTCACAGAT+TGG 0.459764 3_4:+72805259 None:intergenic
AAAACCAAAGTTAGGAGAAC+GGG 0.463470 3_4:-72806734 Msa0520270:five_prime_UTR
GGAGTTCGTGGGCTTTATAG+AGG 0.472787 3_4:-72804266 Msa0520270:CDS
CTTCTGTTGCGCCTCTCGAA+CGG 0.475440 3_4:-72806347 Msa0520270:CDS
CAGGTTGGGAGCCTGCAAAA+TGG 0.475469 3_4:-72803623 Msa0520270:CDS
ATTCTGATGCGCCTTTCTTG+TGG 0.483627 3_4:-72803710 Msa0520270:CDS
CATATGAGCGGTATAAAAGT+TGG 0.484712 3_4:-72805065 Msa0520270:CDS
TCAACCCGTTCTCCTAACTT+TGG 0.489006 3_4:+72806730 None:intergenic
TGTGGTGGTTGCAGAGGTAA+TGG 0.490076 3_4:-72805135 Msa0520270:intron
AATTATCCCATGTTAGGAAC+GGG 0.491656 3_4:-72805033 Msa0520270:CDS
CCTGATAAGCAAGTTTGGTA+CGG 0.500536 3_4:+72804935 None:intergenic
CAGCAAGAGCTCCACAAGAA+AGG 0.502227 3_4:+72803699 None:intergenic
TATAAAGAAGCTGGAGTTCG+TGG 0.504107 3_4:-72804278 Msa0520270:CDS
CCTGTAGGTCCTGTACATAA+TGG 0.505706 3_4:-72804326 Msa0520270:CDS
GTAATGGAGCTAGTGTTATC+CGG 0.505957 3_4:-72805119 Msa0520270:CDS
CTGATAAGCAAGTTTGGTAC+GGG 0.509585 3_4:+72804936 None:intergenic
CGTAAGCATTAACTACATAA+GGG 0.510324 3_4:-72803513 Msa0520270:intron
TCGAACGGGTTAAGATACTT+TGG 0.511447 3_4:-72806332 Msa0520270:CDS
CATATGGAAGAATTCCAGTA+AGG 0.512544 3_4:+72803798 None:intergenic
TATATTATTTGGGGAATGCA+AGG 0.513028 3_4:-72802012 Msa0520270:three_prime_UTR
CCTTTAATGCCATTATGTAC+AGG 0.518203 3_4:+72804317 None:intergenic
GTCTCTTAACAACATCCAAA+GGG 0.520837 3_4:+72803651 None:intergenic
CCATTATGTACAGGACCTAC+AGG 0.521264 3_4:+72804326 None:intergenic
CGTGGGCTTTATAGAGGTGT+AGG 0.521949 3_4:-72804260 Msa0520270:intron
AGAAGGACCCGTTCCTAACA+TGG 0.522339 3_4:+72805026 None:intergenic
ACAAGTGCCTATAAAGAAGC+TGG 0.523472 3_4:-72804287 Msa0520270:CDS
ACAAGAAAGGCGCATCAGAA+TGG 0.524845 3_4:+72803712 None:intergenic
ATAAAATGCAAGGCTGCGTA+TGG 0.526789 3_4:+72805090 None:intergenic
CACCACATATGACATGATGA+AGG 0.528465 3_4:-72802453 Msa0520270:CDS
AATAAGTTGCTAAAGCATGA+AGG 0.534112 3_4:-72805249 Msa0520270:CDS
ACTTATATTTACCGAGGGTG+CGG 0.534542 3_4:+72801918 None:intergenic
TGTCTCTTAACAACATCCAA+AGG 0.535374 3_4:+72803650 None:intergenic
ATCTACTGCCACCGCACCCT+CGG 0.535446 3_4:-72801929 Msa0520270:three_prime_UTR
GTTAAGGAGTTAATTGCTGG+TGG 0.536683 3_4:-72806393 Msa0520270:CDS
CCAGCTAAAAGATCGATAGA+AGG 0.537017 3_4:+72805009 None:intergenic
TGAAATCGGTGATCCTTCAA+AGG 0.538410 3_4:-72806675 Msa0520270:five_prime_UTR
CATATGACATGATGAAGGCT+TGG 0.542135 3_4:-72802448 Msa0520270:CDS
TGGCGTTTAAGGGAGGAGAA+CGG 0.545217 3_4:+72806704 None:intergenic
CTGTAAGTTTATATTATTTG+GGG 0.547194 3_4:-72802021 Msa0520270:three_prime_UTR
GTTAAGAGACAAATGCAGGT+TGG 0.547616 3_4:-72803638 Msa0520270:CDS
GGAAGATTGTTCGAAATCAA+GGG 0.550950 3_4:-72803556 Msa0520270:CDS
ACCAAAGGATGTATCAAAGA+TGG 0.551765 3_4:-72804371 Msa0520270:CDS
AAGGATCACCGATTTCAAAA+CGG 0.555000 3_4:+72806681 None:intergenic
CTACTTCTAAGGAAAGAGAA+TGG 0.559192 3_4:+72806576 None:intergenic
ACGGGTTAAGATACTTTGGC+AGG 0.560352 3_4:-72806328 Msa0520270:intron
GGAAGAATTCCAGTAAGGGT+TGG 0.561588 3_4:+72803803 None:intergenic
CTCATATGTCATAAAATGCA+AGG 0.566747 3_4:+72805080 None:intergenic
AAATGCAATACTATTTCACT+AGG 0.568079 3_4:-72802126 Msa0520270:three_prime_UTR
ATATTATTTGGGGAATGCAA+GGG 0.572688 3_4:-72802011 Msa0520270:three_prime_UTR
AGCCTTCATCATGTCATATG+TGG 0.577415 3_4:+72802451 None:intergenic
TTGTTCGAAATCAAGGGTGG+AGG 0.579018 3_4:-72803550 Msa0520270:CDS
TTGGTACGGGCAAGATCTAA+GGG 0.579231 3_4:+72804949 None:intergenic
CAATTATCCCATGTTAGGAA+CGG 0.586032 3_4:-72805034 Msa0520270:CDS
TTTAGCTGGCTCAGCAGCAG+GGG 0.587262 3_4:-72804995 Msa0520270:CDS
ATATGGAAGAATTCCAGTAA+GGG 0.589360 3_4:+72803799 None:intergenic
GTATTGATTAATTATTCACA+AGG 0.592307 3_4:+72802261 None:intergenic
GTGAAACTAATTGCAGCTGA+TGG 0.596426 3_4:+72802473 None:intergenic
TATATTTACCGAGGGTGCGG+TGG 0.596708 3_4:+72801921 None:intergenic
GACATGATGAAGGCTTGGCT+TGG 0.597274 3_4:-72802443 Msa0520270:CDS
GCAGTTCATTCTCAACCTGT+AGG 0.601300 3_4:-72804341 Msa0520270:CDS
TTATAGGTGGTGGACACCAA+AGG 0.602285 3_4:-72804386 Msa0520270:intron
TAAAACCAAAGTTAGGAGAA+CGG 0.603962 3_4:-72806735 Msa0520270:five_prime_UTR
ATCTACGAGTTACATGCCTA+AGG 0.607911 3_4:+72802168 None:intergenic
AAAACGGTGGCGTTTAAGGG+AGG 0.608386 3_4:+72806697 None:intergenic
ACCAAGATTATGAAATCCAC+CGG 0.612129 3_4:+72805287 None:intergenic
AGTATCTTAACCCGTTCGAG+AGG 0.612939 3_4:+72806336 None:intergenic
TTAGCTGGCTCAGCAGCAGG+GGG 0.614047 3_4:-72804994 Msa0520270:CDS
AGGCTGCGTATGGAACAATC+CGG 0.618289 3_4:+72805100 None:intergenic
GAAGGACCCGTTCCTAACAT+GGG 0.618969 3_4:+72805027 None:intergenic
TGTTGTTAAGAGACAAATGC+AGG 0.624133 3_4:-72803642 Msa0520270:CDS
CGTCAACTTATATTTACCGA+GGG 0.624382 3_4:+72801913 None:intergenic
TATTGATTAATTATTCACAA+GGG 0.637270 3_4:+72802262 None:intergenic
ATAAAGAAGCTGGAGTTCGT+GGG 0.638356 3_4:-72804277 Msa0520270:CDS
TTTATGATCATGCTGATGCA+TGG 0.638732 3_4:-72801977 Msa0520270:three_prime_UTR
ACGTCAACTTATATTTACCG+AGG 0.667237 3_4:+72801912 None:intergenic
AGATTGTTCGAAATCAAGGG+TGG 0.681478 3_4:-72803553 Msa0520270:CDS
GTATACAAAATATTAATCAG+AGG 0.685631 3_4:-72802287 Msa0520270:three_prime_UTR
TCGGTAAATATAAGTTGACG+TGG 0.716252 3_4:-72801910 Msa0520270:three_prime_UTR
GATCACCGATTTCAAAACGG+TGG 0.734682 3_4:+72806684 None:intergenic
AGGCGTACAGGAGTTTCACG+AGG 0.737566 3_4:-72802058 Msa0520270:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACAAAAATAAAATGA+AGG + chr3_4:72803306-72803325 None:intergenic 10.0%
!!! TATAATTGATTTTCATAAAA+TGG - chr3_4:72805603-72805622 Msa0520270:intron 10.0%
!!! AAATATTTTTACAAAGTAAA+CGG + chr3_4:72805923-72805942 None:intergenic 10.0%
!!! ATTTTATATTTTTACAGACA+AGG - chr3_4:72803326-72803345 Msa0520270:intron 15.0%
!! CAAAGTATATATGTATATAA+TGG + chr3_4:72804147-72804166 None:intergenic 15.0%
!! CATTATATACATATATACTT+TGG - chr3_4:72804145-72804164 Msa0520270:intron 15.0%
!!! GTTTTTGTTTACAATTTTAT+AGG - chr3_4:72804235-72804254 Msa0520270:intron 15.0%
!! TAGTATAAGATTATATGATA+AGG + chr3_4:72805159-72805178 None:intergenic 15.0%
!! TTAAAATTAATGTTAAGATG+TGG - chr3_4:72805317-72805336 Msa0520270:intron 15.0%
!!! AATATTTTTACAAAGTAAAC+GGG + chr3_4:72805922-72805941 None:intergenic 15.0%
!!! TATTGATTAATTATTCACAA+GGG + chr3_4:72806378-72806397 None:intergenic 15.0%
!!! TATATTTTTGCATTCTAATT+AGG - chr3_4:72806559-72806578 Msa0520270:five_prime_UTR 15.0%
!! ACTGTAAGTTTATATTATTT+GGG - chr3_4:72806615-72806634 Msa0520270:five_prime_UTR 15.0%
!! TGAATACATTCATTCATTAT+AGG + chr3_4:72802430-72802449 None:intergenic 20.0%
!! AGATATTTCCAATATAATAC+AGG + chr3_4:72802592-72802611 None:intergenic 20.0%
!! TATAATGTAACATCAAACAA+TGG + chr3_4:72802901-72802920 None:intergenic 20.0%
!!! AAAAAATCACGATTTTAACA+CGG - chr3_4:72803114-72803133 Msa0520270:intron 20.0%
!!! TCCAAGACTATTTTTTAAAT+GGG - chr3_4:72803194-72803213 Msa0520270:intron 20.0%
!! AAATAAAATGAAGGTTAAAG+AGG + chr3_4:72803297-72803316 None:intergenic 20.0%
!! AAATGAAAATCAGAAACAAA+AGG + chr3_4:72804017-72804036 None:intergenic 20.0%
!! ATTAGTTGTGTGTAATAAAT+TGG - chr3_4:72804076-72804095 Msa0520270:intron 20.0%
!! TATATACATATATACTTTGG+TGG - chr3_4:72804148-72804167 Msa0520270:intron 20.0%
!!! TTTGTTTACAATTTTATAGG+TGG - chr3_4:72804238-72804257 Msa0520270:intron 20.0%
!! ATTATGATTGCCAAAAATAA+AGG + chr3_4:72804432-72804451 None:intergenic 20.0%
!!! TTATTTTTGGCAATCATAAT+TGG - chr3_4:72804432-72804451 Msa0520270:intron 20.0%
!! GTCAATATAAATAAAATTCC+AGG + chr3_4:72804571-72804590 None:intergenic 20.0%
!! AATGAATGTATTGAAAACAT+TGG + chr3_4:72804785-72804804 None:intergenic 20.0%
!!! ATCAAATGTATTTTTGTATG+CGG + chr3_4:72805054-72805073 None:intergenic 20.0%
!! CATACAAAAATACATTTGAT+GGG - chr3_4:72805054-72805073 Msa0520270:CDS 20.0%
!! ATAAAATGGCTTGAATAAAT+TGG - chr3_4:72805617-72805636 Msa0520270:intron 20.0%
!!! CATGCTTTTCAAAATTTAAA+TGG + chr3_4:72805877-72805896 None:intergenic 20.0%
!! AAGTTACAATAGAAAATTTC+AGG + chr3_4:72806044-72806063 None:intergenic 20.0%
!! GTATACAAAATATTAATCAG+AGG - chr3_4:72806350-72806369 Msa0520270:CDS 20.0%
!!! GTATTGATTAATTATTCACA+AGG + chr3_4:72806379-72806398 None:intergenic 20.0%
!!! TTCATTATTTCTTAATCCTT+AGG - chr3_4:72806453-72806472 Msa0520270:CDS 20.0%
!! GACTGTAAGTTTATATTATT+TGG - chr3_4:72806614-72806633 Msa0520270:five_prime_UTR 20.0%
!! CTGTAAGTTTATATTATTTG+GGG - chr3_4:72806616-72806635 Msa0520270:five_prime_UTR 20.0%
! ATTAACTCCTTAACATAAAC+AGG + chr3_4:72802238-72802257 None:intergenic 25.0%
!! TTGATTTTCATCTGATTGTT+TGG - chr3_4:72802365-72802384 Msa0520270:three_prime_UTR 25.0%
! ATCTTCATCCTGTATTATAT+TGG - chr3_4:72802581-72802600 Msa0520270:intron 25.0%
! GTTACATTATACATAATCGA+TGG - chr3_4:72802910-72802929 Msa0520270:intron 25.0%
! TTTAATGCAATTGACAACAA+TGG - chr3_4:72803170-72803189 Msa0520270:intron 25.0%
!!! CTCCAAGACTATTTTTTAAA+TGG - chr3_4:72803193-72803212 Msa0520270:intron 25.0%
! ACCCATTTAAAAAATAGTCT+TGG + chr3_4:72803198-72803217 None:intergenic 25.0%
!!! CTATTTTTTAAATGGGTGTA+TGG - chr3_4:72803201-72803220 Msa0520270:intron 25.0%
! AAGGATTGAAATATGGTTAA+AGG + chr3_4:72803737-72803756 None:intergenic 25.0%
! ATGTTTCAAGGATTGAAATA+TGG + chr3_4:72803744-72803763 None:intergenic 25.0%
! TGTATGTATTACATGTTTCA+AGG + chr3_4:72803756-72803775 None:intergenic 25.0%
! TCGTTTGAATTTCAACTAAT+AGG - chr3_4:72803919-72803938 Msa0520270:intron 25.0%
! TTCATTACTGTATATGATGT+AGG + chr3_4:72803992-72804011 None:intergenic 25.0%
!!! ACCAATACAACCTTTATTTT+TGG - chr3_4:72804419-72804438 Msa0520270:intron 25.0%
! TTCTTGTTGGATAATTATGT+TGG - chr3_4:72804455-72804474 Msa0520270:intron 25.0%
! ATTTCCTAGGAATTCATTTA+GGG + chr3_4:72804658-72804677 None:intergenic 25.0%
! TATTTCCTAGGAATTCATTT+AGG + chr3_4:72804659-72804678 None:intergenic 25.0%
!! AGTATCTTAAGTTATTTCCT+AGG + chr3_4:72804671-72804690 None:intergenic 25.0%
! GCATACAAAAATACATTTGA+TGG - chr3_4:72805053-72805072 Msa0520270:CDS 25.0%
!!! TGTTTCAAGTTTGAGTTTAA+AGG - chr3_4:72805205-72805224 Msa0520270:intron 25.0%
! CAGAATGATAGATTCTTATT+GGG + chr3_4:72805268-72805287 None:intergenic 25.0%
! TCAGAATGATAGATTCTTAT+TGG + chr3_4:72805269-72805288 None:intergenic 25.0%
! TTAAGATTTCGTTACAAGAT+TGG + chr3_4:72805301-72805320 None:intergenic 25.0%
!! TAGTGTAAAACTGATTTACT+TGG - chr3_4:72805366-72805385 Msa0520270:intron 25.0%
!! TTCTCTTGTTCACTAAATTT+TGG - chr3_4:72805506-72805525 Msa0520270:intron 25.0%
!! TCTCTTGTTCACTAAATTTT+GGG - chr3_4:72805507-72805526 Msa0520270:intron 25.0%
! TCATTAGTCATATGGTTTAA+AGG + chr3_4:72805762-72805781 None:intergenic 25.0%
! AAACCATTAATTTCAATCCT+TGG + chr3_4:72805786-72805805 None:intergenic 25.0%
! TGTCCATATTATATATCCTT+TGG - chr3_4:72805895-72805914 Msa0520270:intron 25.0%
!! AGTTTCTTCAGGATAATTTT+TGG - chr3_4:72806244-72806263 Msa0520270:intron 25.0%
! AAATGCAATACTATTTCACT+AGG - chr3_4:72806511-72806530 Msa0520270:five_prime_UTR 25.0%
TAAAACCAAAGTTAGGAGAA+CGG - chr3_4:72801902-72801921 Msa0520270:three_prime_UTR 30.0%
!! TGATTTTCTCTGATTCGAAT+TGG - chr3_4:72802008-72802027 Msa0520270:three_prime_UTR 30.0%
TTCTTCTCAAGATTCTAGAT+TGG - chr3_4:72802156-72802175 Msa0520270:three_prime_UTR 30.0%
TATGTTAAGGAGTTAATTGC+TGG - chr3_4:72802241-72802260 Msa0520270:three_prime_UTR 30.0%
ATTATAGGCGAACAATACAT+TGG + chr3_4:72802415-72802434 None:intergenic 30.0%
TGGATCATGTAATTCTTTGA+TGG - chr3_4:72802641-72802660 Msa0520270:intron 30.0%
ACTTTGGTAAATGGAATTTC+TGG - chr3_4:72802670-72802689 Msa0520270:intron 30.0%
CTTTGGTAAATGGAATTTCT+GGG - chr3_4:72802671-72802690 Msa0520270:intron 30.0%
TTTGGTAAATGGAATTTCTG+GGG - chr3_4:72802672-72802691 Msa0520270:intron 30.0%
! TTCTGGGGAACATATAATAA+AGG - chr3_4:72802687-72802706 Msa0520270:intron 30.0%
ATTACAAGGATTGCAAAATC+AGG + chr3_4:72802831-72802850 None:intergenic 30.0%
GGAGAAATAAACGTTAAAAC+AGG + chr3_4:72802880-72802899 None:intergenic 30.0%
ACATTATACATAATCGATGG+TGG - chr3_4:72802913-72802932 Msa0520270:intron 30.0%
TCAATATTCCACTAAGCTAT+AGG + chr3_4:72802995-72803014 None:intergenic 30.0%
!! ATATTTTTACAGACAAGGAC+CGG - chr3_4:72803331-72803350 Msa0520270:intron 30.0%
TTAGCAACTTATTCACAGAT+TGG + chr3_4:72803381-72803400 None:intergenic 30.0%
AATAAGTTGCTAAAGCATGA+AGG - chr3_4:72803388-72803407 Msa0520270:intron 30.0%
CTCATATGTCATAAAATGCA+AGG + chr3_4:72803560-72803579 None:intergenic 30.0%
! TGCATTTTATGACATATGAG+CGG - chr3_4:72803560-72803579 Msa0520270:CDS 30.0%
TCCAATATACTATCTTGCAT+TGG - chr3_4:72803821-72803840 Msa0520270:intron 30.0%
CCAATATACTATCTTGCATT+GGG - chr3_4:72803822-72803841 Msa0520270:intron 30.0%
TGTGATCAATACCATTTAGT+GGG - chr3_4:72803874-72803893 Msa0520270:intron 30.0%
ATAGTGCTAGAATTGCAATT+TGG + chr3_4:72804058-72804077 None:intergenic 30.0%
! GTTTACAATTTTATAGGTGG+TGG - chr3_4:72804241-72804260 Msa0520270:intron 30.0%
GCCAAAAATAAAGGTTGTAT+TGG + chr3_4:72804423-72804442 None:intergenic 30.0%
! CAATCATAATTGGTTCTTGT+TGG - chr3_4:72804442-72804461 Msa0520270:intron 30.0%
! TATGTTGGAATTCTTGTTTG+TGG - chr3_4:72804470-72804489 Msa0520270:intron 30.0%
ACTTCAAAACAGGAGTTATA+TGG + chr3_4:72804507-72804526 None:intergenic 30.0%
! GTTGTGGATTACTAGATAAA+AGG - chr3_4:72804525-72804544 Msa0520270:intron 30.0%
GAGAGAAAATAATAAGAACC+TGG - chr3_4:72804550-72804569 Msa0520270:intron 30.0%
ATCCTTATAAACAGGGATTA+GGG + chr3_4:72804623-72804642 None:intergenic 30.0%
TATCCTTATAAACAGGGATT+AGG + chr3_4:72804624-72804643 None:intergenic 30.0%
CCAATGTATCCTTATAAACA+GGG + chr3_4:72804630-72804649 None:intergenic 30.0%
ACCAATGTATCCTTATAAAC+AGG + chr3_4:72804631-72804650 None:intergenic 30.0%
! AGCTAAGGTATGCTTTTATT+AGG + chr3_4:72804735-72804754 None:intergenic 30.0%
AATGCAAGAAATGATAGCTA+AGG + chr3_4:72804750-72804769 None:intergenic 30.0%
ATATGGAAGAATTCCAGTAA+GGG + chr3_4:72804841-72804860 None:intergenic 30.0%
TAGAACTTTAAACCAGCATA+TGG + chr3_4:72804858-72804877 None:intergenic 30.0%
!! AAAATACATTTGATGGGCTT+AGG - chr3_4:72805060-72805079 Msa0520270:CDS 30.0%
CGTAAGCATTAACTACATAA+GGG - chr3_4:72805124-72805143 Msa0520270:CDS 30.0%
TGAGTTTAAAGGAGATTTAC+TGG - chr3_4:72805216-72805235 Msa0520270:intron 30.0%
GCACAATATAAGATTCTCAT+TGG - chr3_4:72805339-72805358 Msa0520270:intron 30.0%
ACCAAAACTTGAAGAGATTA+GGG + chr3_4:72805404-72805423 None:intergenic 30.0%
TACCAAAACTTGAAGAGATT+AGG + chr3_4:72805405-72805424 None:intergenic 30.0%
ATGGCTTGAATAAATTGGAT+TGG - chr3_4:72805622-72805641 Msa0520270:intron 30.0%
TTGATGTCATTGTATTACAG+TGG - chr3_4:72805648-72805667 Msa0520270:intron 30.0%
TATTACAGTGGTAGATAGAT+AGG - chr3_4:72805660-72805679 Msa0520270:intron 30.0%
GAGTGAACATTTCATAGATA+TGG - chr3_4:72805682-72805701 Msa0520270:intron 30.0%
ACTGGATAAATGATGCATAT+TGG - chr3_4:72805843-72805862 Msa0520270:intron 30.0%
GGTCCAAAGGATATATAATA+TGG + chr3_4:72805901-72805920 None:intergenic 30.0%
TCAAGAGTTTCTCATCTTAT+TGG + chr3_4:72805986-72806005 None:intergenic 30.0%
AAGATTCCTAATCATTTCCT+TGG - chr3_4:72806074-72806093 Msa0520270:intron 30.0%
TGTAAAAATGAAGTCAGTCA+CGG + chr3_4:72806296-72806315 None:intergenic 30.0%
!! TGACTGACTTCATTTTTACA+GGG - chr3_4:72806296-72806315 Msa0520270:intron 30.0%
TTGTGAAGTGTGATATCATT+TGG - chr3_4:72806409-72806428 Msa0520270:CDS 30.0%
TTCACTAGGATTAATATGTC+AGG - chr3_4:72806525-72806544 Msa0520270:five_prime_UTR 30.0%
TATATTATTTGGGGAATGCA+AGG - chr3_4:72806625-72806644 Msa0520270:five_prime_UTR 30.0%
ATATTATTTGGGGAATGCAA+GGG - chr3_4:72806626-72806645 Msa0520270:five_prime_UTR 30.0%
AAAACCAAAGTTAGGAGAAC+GGG - chr3_4:72801903-72801922 Msa0520270:three_prime_UTR 35.0%
!! AAGGATCACCGATTTCAAAA+CGG + chr3_4:72801959-72801978 None:intergenic 35.0%
CAACACAAAAAAGCCTTTGA+AGG + chr3_4:72801978-72801997 None:intergenic 35.0%
! CTACTTCTAAGGAAAGAGAA+TGG + chr3_4:72802064-72802083 None:intergenic 35.0%
TCTCTTTCCTTAGAAGTAGA+TGG - chr3_4:72802065-72802084 Msa0520270:three_prime_UTR 35.0%
CTCTTTCCTTAGAAGTAGAT+GGG - chr3_4:72802066-72802085 Msa0520270:three_prime_UTR 35.0%
ATATCTCTGAGTTACTTGCT+TGG - chr3_4:72802606-72802625 Msa0520270:intron 35.0%
TTGCTTGGAAATGATCGAAA+TGG - chr3_4:72802621-72802640 Msa0520270:intron 35.0%
!! TCTTTGATGGATTTCGACTT+TGG - chr3_4:72802654-72802673 Msa0520270:intron 35.0%
TGGATTTCGACTTTGGTAAA+TGG - chr3_4:72802661-72802680 Msa0520270:intron 35.0%
GAACATATAATAAAGGAGCG+AGG - chr3_4:72802694-72802713 Msa0520270:intron 35.0%
TAATAAAGGAGCGAGGATTT+AGG - chr3_4:72802701-72802720 Msa0520270:intron 35.0%
GGATTTATGTTGTGATGCTA+TGG - chr3_4:72802750-72802769 Msa0520270:intron 35.0%
!! TTTCTGCTCCTTGATTTGTA+TGG - chr3_4:72802782-72802801 Msa0520270:intron 35.0%
TCGATGTGTGGAAAATTACA+AGG + chr3_4:72802845-72802864 None:intergenic 35.0%
TACAATGCTTGGAGTAAACA+AGG + chr3_4:72802955-72802974 None:intergenic 35.0%
TTTAACACGGTTGACAACAA+TGG - chr3_4:72803127-72803146 Msa0520270:intron 35.0%
ACCAAGATTATGAAATCCAC+CGG + chr3_4:72803353-72803372 None:intergenic 35.0%
! CTAAAGCATGAAGGTTTTCT+AGG - chr3_4:72803397-72803416 Msa0520270:intron 35.0%
CATATGAGCGGTATAAAAGT+TGG - chr3_4:72803572-72803591 Msa0520270:CDS 35.0%
CTAACATGGGATAATTGTTC+AGG + chr3_4:72803600-72803619 None:intergenic 35.0%
CTGAACAATTATCCCATGTT+AGG - chr3_4:72803598-72803617 Msa0520270:CDS 35.0%
CAATTATCCCATGTTAGGAA+CGG - chr3_4:72803603-72803622 Msa0520270:CDS 35.0%
AATTATCCCATGTTAGGAAC+GGG - chr3_4:72803604-72803623 Msa0520270:CDS 35.0%
CTTTACCTGATAAGCAAGTT+TGG + chr3_4:72803710-72803729 None:intergenic 35.0%
CATGCTACAATGTCTCATAT+AGG + chr3_4:72803784-72803803 None:intergenic 35.0%
CCCAATGCAAGATAGTATAT+TGG + chr3_4:72803825-72803844 None:intergenic 35.0%
GTGTGATCAATACCATTTAG+TGG - chr3_4:72803873-72803892 Msa0520270:intron 35.0%
! ATAGGAGAGCGTATTGAAAA+AGG - chr3_4:72803937-72803956 Msa0520270:intron 35.0%
!! AGCGTATTGAAAAAGGTGTT+GGG - chr3_4:72803944-72803963 Msa0520270:intron 35.0%
TTCCATTGTATGAACGTATG+AGG - chr3_4:72804104-72804123 Msa0520270:intron 35.0%
!! ACATATATACTTTGGTGGTG+AGG - chr3_4:72804153-72804172 Msa0520270:intron 35.0%
!! CATATATACTTTGGTGGTGA+GGG - chr3_4:72804154-72804173 Msa0520270:intron 35.0%
!! ATATATACTTTGGTGGTGAG+GGG - chr3_4:72804155-72804174 Msa0520270:intron 35.0%
ACCAAAGGATGTATCAAAGA+TGG - chr3_4:72804266-72804285 Msa0520270:CDS 35.0%
ACCATCTTTGATACATCCTT+TGG + chr3_4:72804270-72804289 None:intergenic 35.0%
CCTTTAATGCCATTATGTAC+AGG + chr3_4:72804323-72804342 None:intergenic 35.0%
CCTGTACATAATGGCATTAA+AGG - chr3_4:72804320-72804339 Msa0520270:CDS 35.0%
! AAGGTTGTATTGGTAGATTC+CGG + chr3_4:72804413-72804432 None:intergenic 35.0%
!!! TAACTCCTGTTTTGAAGTTG+TGG - chr3_4:72804509-72804528 Msa0520270:intron 35.0%
GTAATCCACAACTTCAAAAC+AGG + chr3_4:72804517-72804536 None:intergenic 35.0%
AACCCTAATCCCTGTTTATA+AGG - chr3_4:72804618-72804637 Msa0520270:intron 35.0%
CCCTGTTTATAAGGATACAT+TGG - chr3_4:72804627-72804646 Msa0520270:intron 35.0%
TCAACCCTAAATGAATTCCT+AGG - chr3_4:72804651-72804670 Msa0520270:intron 35.0%
CATATGGAAGAATTCCAGTA+AGG + chr3_4:72804842-72804861 None:intergenic 35.0%
GTCTCTTAACAACATCCAAA+GGG + chr3_4:72804989-72805008 None:intergenic 35.0%
TGTCTCTTAACAACATCCAA+AGG + chr3_4:72804990-72805009 None:intergenic 35.0%
TGTTGTTAAGAGACAAATGC+AGG - chr3_4:72804995-72805014 Msa0520270:CDS 35.0%
TTAAGAGACAAATGCAGGTT+GGG - chr3_4:72805000-72805019 Msa0520270:CDS 35.0%
AGGAAGATTGTTCGAAATCA+AGG - chr3_4:72805080-72805099 Msa0520270:CDS 35.0%
GGAAGATTGTTCGAAATCAA+GGG - chr3_4:72805081-72805100 Msa0520270:CDS 35.0%
GCGTAAGCATTAACTACATA+AGG - chr3_4:72805123-72805142 Msa0520270:CDS 35.0%
CAAAACTTGAAGAGATTAGG+GGG + chr3_4:72805402-72805421 None:intergenic 35.0%
CCAAAACTTGAAGAGATTAG+GGG + chr3_4:72805403-72805422 None:intergenic 35.0%
! GAACCTAGAAAGTGTACTTT+AGG + chr3_4:72805463-72805482 None:intergenic 35.0%
CATAGATATGGCAAGTTAAC+TGG - chr3_4:72805694-72805713 Msa0520270:intron 35.0%
GAGCCAAGGATTGAAATTAA+TGG - chr3_4:72805780-72805799 Msa0520270:intron 35.0%
CTTTCTCAAACTTCAGAAAC+TGG - chr3_4:72805825-72805844 Msa0520270:intron 35.0%
! TGTCTTCCTTATGTTTTGTC+TGG - chr3_4:72806016-72806035 Msa0520270:intron 35.0%
ATTCCTAATCATTTCCTTGG+AGG - chr3_4:72806077-72806096 Msa0520270:intron 35.0%
GAGGCAACTATGTATTAGTT+TGG - chr3_4:72806096-72806115 Msa0520270:intron 35.0%
! ACTATGTATTAGTTTGGCTC+TGG - chr3_4:72806102-72806121 Msa0520270:intron 35.0%
AGAGCAAGGAATGTTAAGAA+TGG + chr3_4:72806130-72806149 None:intergenic 35.0%
!! GTGACTGACTTCATTTTTAC+AGG - chr3_4:72806295-72806314 Msa0520270:intron 35.0%
! TTTTGTATACGTCGTAAGCA+GGG + chr3_4:72806340-72806359 None:intergenic 35.0%
! ATTTTGTATACGTCGTAAGC+AGG + chr3_4:72806341-72806360 None:intergenic 35.0%
TTTATGATCATGCTGATGCA+TGG - chr3_4:72806660-72806679 Msa0520270:five_prime_UTR 35.0%
ATGCATGGTATTTGCTTGTT+TGG - chr3_4:72806675-72806694 Msa0520270:five_prime_UTR 35.0%
CGTCAACTTATATTTACCGA+GGG + chr3_4:72806727-72806746 None:intergenic 35.0%
ACGTCAACTTATATTTACCG+AGG + chr3_4:72806728-72806747 None:intergenic 35.0%
! TCGGTAAATATAAGTTGACG+TGG - chr3_4:72806727-72806746 Msa0520270:five_prime_UTR 35.0%
TTCAAAACGGTGGCGTTTAA+GGG + chr3_4:72801946-72801965 None:intergenic 40.0%
TTTCAAAACGGTGGCGTTTA+AGG + chr3_4:72801947-72801966 None:intergenic 40.0%
!!! AAACGCCACCGTTTTGAAAT+CGG - chr3_4:72801948-72801967 Msa0520270:three_prime_UTR 40.0%
TGAAATCGGTGATCCTTCAA+AGG - chr3_4:72801962-72801981 Msa0520270:three_prime_UTR 40.0%
GAATGGCGTATACTCAGAAT+TGG + chr3_4:72802047-72802066 None:intergenic 40.0%
CGTTATCCCATCTACTTCTA+AGG + chr3_4:72802075-72802094 None:intergenic 40.0%
! GAGTTTTCTGAGCTTCAAAG+TGG - chr3_4:72802094-72802113 Msa0520270:three_prime_UTR 40.0%
GAGCTTCAAAGTGGATAGAT+TGG - chr3_4:72802103-72802122 Msa0520270:three_prime_UTR 40.0%
TCTCAAGATTCTAGATTGGC+TGG - chr3_4:72802160-72802179 Msa0520270:three_prime_UTR 40.0%
! AGATTCTAGATTGGCTGGTT+TGG - chr3_4:72802165-72802184 Msa0520270:three_prime_UTR 40.0%
TCGCGTTCCTGTTTATGTTA+AGG - chr3_4:72802228-72802247 Msa0520270:three_prime_UTR 40.0%
GTTAAGGAGTTAATTGCTGG+TGG - chr3_4:72802244-72802263 Msa0520270:three_prime_UTR 40.0%
!! TTAATTGCTGGTGGATTTGC+TGG - chr3_4:72802253-72802272 Msa0520270:three_prime_UTR 40.0%
!! TCGAACGGGTTAAGATACTT+TGG - chr3_4:72802305-72802324 Msa0520270:three_prime_UTR 40.0%
GATTAGCGTGATAGGTTATG+CGG + chr3_4:72802519-72802538 None:intergenic 40.0%
AGCAAGAGCCATACAAATCA+AGG + chr3_4:72802793-72802812 None:intergenic 40.0%
!! TTGATTTGTATGGCTCTTGC+TGG - chr3_4:72802792-72802811 Msa0520270:intron 40.0%
CTTGGAGTAAACAAGGAACA+AGG + chr3_4:72802948-72802967 None:intergenic 40.0%
CCATACTTGACTACAATGCT+TGG + chr3_4:72802966-72802985 None:intergenic 40.0%
! CCAAGCATTGTAGTCAAGTA+TGG - chr3_4:72802963-72802982 Msa0520270:intron 40.0%
ACTATAGAACGCCGTAAAGA+GGG + chr3_4:72803227-72803246 None:intergenic 40.0%
! ACCGGTGGATTTCATAATCT+TGG - chr3_4:72803349-72803368 Msa0520270:intron 40.0%
CCACATTAGCATAGGTTAAC+AGG + chr3_4:72803487-72803506 None:intergenic 40.0%
CCTGTTAACCTATGCTAATG+TGG - chr3_4:72803484-72803503 Msa0520270:intron 40.0%
GTTAACCTATGCTAATGTGG+TGG - chr3_4:72803487-72803506 Msa0520270:intron 40.0%
! GTAATGGAGCTAGTGTTATC+CGG - chr3_4:72803518-72803537 Msa0520270:CDS 40.0%
ATAAAATGCAAGGCTGCGTA+TGG + chr3_4:72803550-72803569 None:intergenic 40.0%
CCAGCTAAAAGATCGATAGA+AGG + chr3_4:72803631-72803650 None:intergenic 40.0%
! CCTTCTATCGATCTTTTAGC+TGG - chr3_4:72803628-72803647 Msa0520270:CDS 40.0%
CTGATAAGCAAGTTTGGTAC+GGG + chr3_4:72803704-72803723 None:intergenic 40.0%
CCTGATAAGCAAGTTTGGTA+CGG + chr3_4:72803705-72803724 None:intergenic 40.0%
!! GGACCTGCTCTAAAATAGTT+AGG - chr3_4:72803895-72803914 Msa0520270:intron 40.0%
!!! GAGCCTAACTATTTTAGAGC+AGG + chr3_4:72803901-72803920 None:intergenic 40.0%
! GAGCGTATTGAAAAAGGTGT+TGG - chr3_4:72803943-72803962 Msa0520270:intron 40.0%
CACCTCATACGTTCATACAA+TGG + chr3_4:72804109-72804128 None:intergenic 40.0%
!! TATATACTTTGGTGGTGAGG+GGG - chr3_4:72804156-72804175 Msa0520270:intron 40.0%
ACAAGTGCCTATAAAGAAGC+TGG - chr3_4:72804350-72804369 Msa0520270:CDS 40.0%
ACGAACTCCAGCTTCTTTAT+AGG + chr3_4:72804360-72804379 None:intergenic 40.0%
TATAAAGAAGCTGGAGTTCG+TGG - chr3_4:72804359-72804378 Msa0520270:CDS 40.0%
ATAAAGAAGCTGGAGTTCGT+GGG - chr3_4:72804360-72804379 Msa0520270:CDS 40.0%
! AGGTTGTATTGGTAGATTCC+GGG + chr3_4:72804412-72804431 None:intergenic 40.0%
TTGGACCTGATGAAAGAGAA+AGG + chr3_4:72804818-72804837 None:intergenic 40.0%
ACTGGAATTCTTCCATATGC+TGG - chr3_4:72804843-72804862 Msa0520270:intron 40.0%
ATGGACTTCTGATGTTCTTC+AGG + chr3_4:72804909-72804928 None:intergenic 40.0%
GCAGACTTTAACATACCCTT+TGG - chr3_4:72804971-72804990 Msa0520270:CDS 40.0%
GTTAAGAGACAAATGCAGGT+TGG - chr3_4:72804999-72805018 Msa0520270:CDS 40.0%
AGATTGTTCGAAATCAAGGG+TGG - chr3_4:72805084-72805103 Msa0520270:CDS 40.0%
!! CCCCTAATCTCTTCAAGTTT+TGG - chr3_4:72805400-72805419 Msa0520270:intron 40.0%
! CCTAGAAAGTGTACTTTAGG+CGG + chr3_4:72805460-72805479 None:intergenic 40.0%
AGTACACTTTCTAGGTTCTG+TGG - chr3_4:72805465-72805484 Msa0520270:intron 40.0%
GTGAACAAGAGAAATGACAC+TGG + chr3_4:72805499-72805518 None:intergenic 40.0%
TAACACACTGCTCTGTTGTT+TGG - chr3_4:72805556-72805575 Msa0520270:intron 40.0%
! AACACACTGCTCTGTTGTTT+GGG - chr3_4:72805557-72805576 Msa0520270:intron 40.0%
TGCAGAGATTCAAGAAAGCT+TGG - chr3_4:72805735-72805754 Msa0520270:intron 40.0%
ACCATATGACTAATGAGCCA+AGG - chr3_4:72805766-72805785 Msa0520270:intron 40.0%
TCCTTGGCTCATTAGTCATA+TGG + chr3_4:72805770-72805789 None:intergenic 40.0%
TACAAAGTAAACGGGTCCAA+AGG + chr3_4:72805914-72805933 None:intergenic 40.0%
CAGGAACCAGACAAAACATA+AGG + chr3_4:72806025-72806044 None:intergenic 40.0%
TTGCCTCCAAGGAAATGATT+AGG + chr3_4:72806083-72806102 None:intergenic 40.0%
CTAATACATAGTTGCCTCCA+AGG + chr3_4:72806094-72806113 None:intergenic 40.0%
AACAATCTGGAAACAGAGCA+AGG + chr3_4:72806144-72806163 None:intergenic 40.0%
GTGAAACTAATTGCAGCTGA+TGG + chr3_4:72806167-72806186 None:intergenic 40.0%
CACCACATATGACATGATGA+AGG - chr3_4:72806184-72806203 Msa0520270:intron 40.0%
AGCCTTCATCATGTCATATG+TGG + chr3_4:72806189-72806208 None:intergenic 40.0%
CATATGACATGATGAAGGCT+TGG - chr3_4:72806189-72806208 Msa0520270:intron 40.0%
! ACTGATCGAGACTTTTGTTG+AGG + chr3_4:72806227-72806246 None:intergenic 40.0%
AAGTCTCGATCAGTTTCTTC+AGG - chr3_4:72806233-72806252 Msa0520270:intron 40.0%
!!! TTTTTGGTGCTCACTTGTGA+TGG - chr3_4:72806260-72806279 Msa0520270:intron 40.0%
ATCTACGAGTTACATGCCTA+AGG + chr3_4:72806472-72806491 None:intergenic 40.0%
TGCATTCTAATTAGGCGTAC+AGG - chr3_4:72806567-72806586 Msa0520270:five_prime_UTR 40.0%
ACTTATATTTACCGAGGGTG+CGG + chr3_4:72806722-72806741 None:intergenic 40.0%
TCAACCCGTTCTCCTAACTT+TGG + chr3_4:72801910-72801929 None:intergenic 45.0%
!! GATCACCGATTTCAAAACGG+TGG + chr3_4:72801956-72801975 None:intergenic 45.0%
AGTATCTTAACCCGTTCGAG+AGG + chr3_4:72802304-72802323 None:intergenic 45.0%
! ACGGGTTAAGATACTTTGGC+AGG - chr3_4:72802309-72802328 Msa0520270:three_prime_UTR 45.0%
!! GTTGCGTTGATTAGCGTGAT+AGG + chr3_4:72802527-72802546 None:intergenic 45.0%
CAATAAGCTCACTCGATGTG+TGG + chr3_4:72802857-72802876 None:intergenic 45.0%
GGCTATAGCCTATAGCTTAG+TGG - chr3_4:72802984-72803003 Msa0520270:intron 45.0%
CACTATAGAACGCCGTAAAG+AGG + chr3_4:72803228-72803247 None:intergenic 45.0%
! TTTTTACAGACAAGGACCGG+TGG - chr3_4:72803334-72803353 Msa0520270:intron 45.0%
TGCAACCACCACATTAGCAT+AGG + chr3_4:72803495-72803514 None:intergenic 45.0%
TTGGTACGGGCAAGATCTAA+GGG + chr3_4:72803691-72803710 None:intergenic 45.0%
TTTGGTACGGGCAAGATCTA+AGG + chr3_4:72803692-72803711 None:intergenic 45.0%
! CCGTACCAAACTTGCTTATC+AGG - chr3_4:72803702-72803721 Msa0520270:CDS 45.0%
TTAGAGCAGGTCCCACTAAA+TGG + chr3_4:72803888-72803907 None:intergenic 45.0%
!! TTATAGGTGGTGGACACCAA+AGG - chr3_4:72804251-72804270 Msa0520270:intron 45.0%
GCAGTTCATTCTCAACCTGT+AGG - chr3_4:72804296-72804315 Msa0520270:CDS 45.0%
CCATTATGTACAGGACCTAC+AGG + chr3_4:72804314-72804333 None:intergenic 45.0%
CCTGTAGGTCCTGTACATAA+TGG - chr3_4:72804311-72804330 Msa0520270:CDS 45.0%
AGGTGTAGGTATGTATGTCC+CGG - chr3_4:72804391-72804410 Msa0520270:intron 45.0%
CCTGATGAAAGAGAAAGGTG+AGG + chr3_4:72804813-72804832 None:intergenic 45.0%
CCTCACCTTTCTCTTTCATC+AGG - chr3_4:72804810-72804829 Msa0520270:intron 45.0%
GGAAGAATTCCAGTAAGGGT+TGG + chr3_4:72804837-72804856 None:intergenic 45.0%
! ACAAGAAAGGCGCATCAGAA+TGG + chr3_4:72804928-72804947 None:intergenic 45.0%
ATTCTGATGCGCCTTTCTTG+TGG - chr3_4:72804927-72804946 Msa0520270:intron 45.0%
GAGCTCTTGCTGGATTGTTT+GGG - chr3_4:72804949-72804968 Msa0520270:CDS 45.0%
AGCCTGCAAAATGGAGCTAA+TGG - chr3_4:72805023-72805042 Msa0520270:CDS 45.0%
! CTCCATTAGCTCCATTTTGC+AGG + chr3_4:72805028-72805047 None:intergenic 45.0%
TTGTTCGAAATCAAGGGTGG+AGG - chr3_4:72805087-72805106 Msa0520270:CDS 45.0%
ATTGGGCGCATGTATAAAGC+TGG + chr3_4:72805251-72805270 None:intergenic 45.0%
CCGCCTAAAGTACACTTTCT+AGG - chr3_4:72805457-72805476 Msa0520270:intron 45.0%
TTGCAGCTGATGGAACAATC+TGG + chr3_4:72806157-72806176 None:intergenic 45.0%
! GATCGAGACTTTTGTTGAGG+TGG + chr3_4:72806224-72806243 None:intergenic 45.0%
!! TAAAAAATAAAAAATCATAA+TGG - chr3_4:72802132-72802151 Msa0520270:three_prime_UTR 5.0%
!! TTAAATTTAAAAAATAGTAT+TGG + chr3_4:72803155-72803174 None:intergenic 5.0%
TGGCGTTTAAGGGAGGAGAA+CGG + chr3_4:72801936-72801955 None:intergenic 50.0%
AAAACGGTGGCGTTTAAGGG+AGG + chr3_4:72801943-72801962 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+AGG - chr3_4:72802725-72802744 Msa0520270:intron 50.0%
! TGTCAAGTGCTGTCAAGTCG+TGG - chr3_4:72803052-72803071 Msa0520270:intron 50.0%
CTACAGCACTGTAGTGTAGC+AGG - chr3_4:72803086-72803105 Msa0520270:intron 50.0%
TGGGTGTATGGCCCTCTTTA+CGG - chr3_4:72803213-72803232 Msa0520270:intron 50.0%
TGCTAATGTGGTGGTTGCAG+AGG - chr3_4:72803496-72803515 Msa0520270:intron 50.0%
TGTGGTGGTTGCAGAGGTAA+TGG - chr3_4:72803502-72803521 Msa0520270:intron 50.0%
AGGCTGCGTATGGAACAATC+CGG + chr3_4:72803540-72803559 None:intergenic 50.0%
GAAGGACCCGTTCCTAACAT+GGG + chr3_4:72803613-72803632 None:intergenic 50.0%
AGAAGGACCCGTTCCTAACA+TGG + chr3_4:72803614-72803633 None:intergenic 50.0%
!! TTTTAGCTGGCTCAGCAGCA+GGG - chr3_4:72803641-72803660 Msa0520270:CDS 50.0%
! GGAGTTCGTGGGCTTTATAG+AGG - chr3_4:72804371-72804390 Msa0520270:CDS 50.0%
! CGTGGGCTTTATAGAGGTGT+AGG - chr3_4:72804377-72804396 Msa0520270:CDS 50.0%
TCATCAGGTCCAACCCTTAC+TGG - chr3_4:72804825-72804844 Msa0520270:intron 50.0%
CAGCAAGAGCTCCACAAGAA+AGG + chr3_4:72804941-72804960 None:intergenic 50.0%
CTTTCTTGTGGAGCTCTTGC+TGG - chr3_4:72804939-72804958 Msa0520270:CDS 50.0%
GGAGCTCTTGCTGGATTGTT+TGG - chr3_4:72804948-72804967 Msa0520270:CDS 50.0%
GACATGATGAAGGCTTGGCT+TGG - chr3_4:72806194-72806213 Msa0520270:intron 50.0%
! TATATTTACCGAGGGTGCGG+TGG + chr3_4:72806719-72806738 None:intergenic 50.0%
GGCGTTTAAGGGAGGAGAAC+GGG + chr3_4:72801935-72801954 None:intergenic 55.0%
CTTCTGTTGCGCCTCTCGAA+CGG - chr3_4:72802290-72802309 Msa0520270:three_prime_UTR 55.0%
TTCTGTTGCGCCTCTCGAAC+GGG - chr3_4:72802291-72802310 Msa0520270:three_prime_UTR 55.0%
!! CTTTTAGCTGGCTCAGCAGC+AGG - chr3_4:72803640-72803659 Msa0520270:CDS 55.0%
! TTTAGCTGGCTCAGCAGCAG+GGG - chr3_4:72803642-72803661 Msa0520270:CDS 55.0%
!! ATACTTTGGTGGTGAGGGGG+AGG - chr3_4:72804159-72804178 Msa0520270:intron 55.0%
!! TACTTTGGTGGTGAGGGGGA+GGG - chr3_4:72804160-72804179 Msa0520270:intron 55.0%
AGGGGGAGGGATACTTTCTG+AGG - chr3_4:72804173-72804192 Msa0520270:intron 55.0%
GGGGGAGGGATACTTTCTGA+GGG - chr3_4:72804174-72804193 Msa0520270:intron 55.0%
! CAGGTTGGGAGCCTGCAAAA+TGG - chr3_4:72805014-72805033 Msa0520270:CDS 55.0%
AGGCGTACAGGAGTTTCACG+AGG - chr3_4:72806579-72806598 Msa0520270:five_prime_UTR 55.0%
! TTAGCTGGCTCAGCAGCAGG+GGG - chr3_4:72803643-72803662 Msa0520270:CDS 60.0%
GGGTGGAGGCAGTTGTTTGC+AGG - chr3_4:72805101-72805120 Msa0520270:CDS 60.0%
ATCTACTGCCACCGCACCCT+CGG - chr3_4:72806708-72806727 Msa0520270:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 72801901 72806758 72801901 ID=Msa0520270;Name=Msa0520270
chr3_4 mRNA 72801901 72806758 72801901 ID=Msa0520270-mRNA-1;Parent=Msa0520270;Name=Msa0520270-mRNA-1;_AED=0.04;_eAED=0.04;_QI=250|1|1|1|1|1|6|499|343
chr3_4 exon 72801901 72802501 72801901 ID=Msa0520270-mRNA-1:exon:20212;Parent=Msa0520270-mRNA-1
chr3_4 exon 72803514 72803827 72803514 ID=Msa0520270-mRNA-1:exon:20211;Parent=Msa0520270-mRNA-1
chr3_4 exon 72804261 72804402 72804261 ID=Msa0520270-mRNA-1:exon:20210;Parent=Msa0520270-mRNA-1
chr3_4 exon 72804936 72805143 72804936 ID=Msa0520270-mRNA-1:exon:20209;Parent=Msa0520270-mRNA-1
chr3_4 exon 72805231 72805316 72805231 ID=Msa0520270-mRNA-1:exon:20208;Parent=Msa0520270-mRNA-1
chr3_4 exon 72806329 72806758 72806329 ID=Msa0520270-mRNA-1:exon:20207;Parent=Msa0520270-mRNA-1
chr3_4 five_prime_UTR 72806509 72806758 72806509 ID=Msa0520270-mRNA-1:five_prime_utr;Parent=Msa0520270-mRNA-1
chr3_4 CDS 72806329 72806508 72806329 ID=Msa0520270-mRNA-1:cds;Parent=Msa0520270-mRNA-1
chr3_4 CDS 72805231 72805316 72805231 ID=Msa0520270-mRNA-1:cds;Parent=Msa0520270-mRNA-1
chr3_4 CDS 72804936 72805143 72804936 ID=Msa0520270-mRNA-1:cds;Parent=Msa0520270-mRNA-1
chr3_4 CDS 72804261 72804402 72804261 ID=Msa0520270-mRNA-1:cds;Parent=Msa0520270-mRNA-1
chr3_4 CDS 72803514 72803827 72803514 ID=Msa0520270-mRNA-1:cds;Parent=Msa0520270-mRNA-1
chr3_4 CDS 72802400 72802501 72802400 ID=Msa0520270-mRNA-1:cds;Parent=Msa0520270-mRNA-1
chr3_4 three_prime_UTR 72801901 72802399 72801901 ID=Msa0520270-mRNA-1:three_prime_utr;Parent=Msa0520270-mRNA-1
Gene Sequence

>Msa0520270

ATGGATTCTTCTCAAGATTCTAGATTGGCTGGTTTGGTGAAAAATGCATCTATTAAGAGAGATGAATCTAGTTTCGATCGCGTTCCTGTTTATGTTAAGGAGTTAATTGCTGGTGGATTTGCTGGTGCGCTTGCTAAGACTTCTGTTGCGCCTCTCGAACGGGTTAAGATACTTTGGCAGACAAGGACCGGTGGATTTCATAATCTTGGTGTGTGCCAATCTGTGAATAAGTTGCTAAAGCATGAAGGTTTTCTAGGATTATATAAAGGTAATGGAGCTAGTGTTATCCGGATTGTTCCATACGCAGCCTTGCATTTTATGACATATGAGCGGTATAAAAGTTGGATCCTGAACAATTATCCCATGTTAGGAACGGGTCCTTCTATCGATCTTTTAGCTGGCTCAGCAGCAGGGGGAACTTCAGTTTTATGTACATATCCCTTAGATCTTGCCCGTACCAAACTTGCTTATCAGGTGGTGGACACCAAAGGATGTATCAAAGATGGTATTAAAGCAGTTCATTCTCAACCTGTAGGTCCTGTACATAATGGCATTAAAGGTGTACTTACAAGTGCCTATAAAGAAGCTGGAGTTCGTGGGCTTTATAGAGGTGTAGGTCCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTATACGTATGAGAAGTTGAAAATGCATGTTCCTGAAGAACATCAGAAGTCCATTCTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTGGATGTTGTTAAGAGACAAATGCAGGTTGGGAGCCTGCAAAATGGAGCTAATGGAGATGCCGCATACAAAAATACATTTGATGGGCTTAGGAAGATTGTTCGAAATCAAGGGTGGAGGCAGTTGTTTGCAGGCGTAAGCATTAACTACATAAGGATTGTTCCATCAGCTGCAATTAGTTTCACCACATATGACATGATGAAGGCTTGGCTTGGTGTACCACCTCAACAAAAGTCTCGATCAGTTTCTTCAGGATAA
Protein sequence

>Msa0520270

MDSSQDSRLAGLVKNASIKRDESSFDRVPVYVKELIAGGFAGALAKTSVAPLERVKILWQTRTGGFHNLGVCQSVNKLLKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPMLGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGCIKDGIKAVHSQPVGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNGANGDAAYKNTFDGLRKIVRNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKAWLGVPPQQKSRSVSSG*