Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262700 | XP_013465226.1 | 97.283 | 368 | 7 | 1 | 1 | 365 | 1 | 368 | 0.0 | 749 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262700 | sp|Q9SIN2|TBL39_ARATH | 65.988 | 344 | 110 | 3 | 28 | 364 | 22 | 365 | 5.63e-179 | 504 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262700 | A0A072VCD5 | 97.283 | 368 | 7 | 1 | 1 | 365 | 1 | 368 | 0.0 | 749 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0010800 | Msa0262700 | 0.812713 | 3.690682e-51 | -8.615850e-47 |
Msa0074750 | Msa0262700 | 0.808931 | 2.430552e-50 | -8.615850e-47 |
Msa0081650 | Msa0262700 | 0.811130 | 8.167335e-51 | -8.615850e-47 |
Msa0190550 | Msa0262700 | 0.810774 | 9.752265e-51 | -8.615850e-47 |
Msa0221140 | Msa0262700 | 0.905043 | 6.512269e-80 | -8.615850e-47 |
Msa0262700 | Msa0300430 | 0.917044 | 8.566108e-86 | -8.615850e-47 |
Msa0262700 | Msa0338010 | 0.888353 | 6.368292e-73 | -8.615850e-47 |
Msa0262700 | Msa0376750 | 0.815048 | 1.128414e-51 | -8.615850e-47 |
Msa0262700 | Msa0403490 | 0.813620 | 2.334035e-51 | -8.615850e-47 |
Msa0262700 | Msa0416960 | 0.803524 | 3.345242e-49 | -8.615850e-47 |
Msa0262700 | Msa0431210 | 0.800421 | 1.452719e-48 | -8.615850e-47 |
Msa0262700 | Msa0471690 | 0.825135 | 5.529338e-54 | -8.615850e-47 |
Msa0262700 | Msa0534980 | 0.806825 | 6.816039e-50 | -8.615850e-47 |
Msa0262700 | Msa0544170 | 0.821019 | 5.043845e-53 | -8.615850e-47 |
Msa0262700 | Msa0544730 | 0.815556 | 8.702371e-52 | -8.615850e-47 |
Msa0262700 | Msa0608270 | 0.801924 | 7.158356e-49 | -8.615850e-47 |
Msa0262700 | Msa0648830 | 0.807864 | 4.103202e-50 | -8.615850e-47 |
Msa0262700 | Msa0847410 | 0.800838 | 1.194645e-48 | -8.615850e-47 |
Msa0262700 | Msa0907850 | 0.809376 | 1.950866e-50 | -8.615850e-47 |
Msa0262700 | Msa0985220 | 0.809026 | 2.319273e-50 | -8.615850e-47 |
Msa0262700 | Msa1201640 | 0.801198 | 1.008196e-48 | -8.615850e-47 |
Msa0262700 | Msa1209190 | 0.804824 | 1.794395e-49 | -8.615850e-47 |
Msa0262700 | Msa1330550 | 0.810142 | 1.335519e-50 | -8.615850e-47 |
Msa0262700 | Msa1343230 | 0.812713 | 3.691088e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262700 | MtrunA17_Chr2g0325481 | 97.283 | 368 | 7 | 1 | 1 | 365 | 1 | 368 | 0.0 | 749 |
Msa0262700 | MtrunA17_Chr4g0041011 | 75.000 | 360 | 85 | 1 | 4 | 363 | 9 | 363 | 0.0 | 584 |
Msa0262700 | MtrunA17_Chr2g0283581 | 59.836 | 366 | 136 | 5 | 1 | 363 | 1 | 358 | 6.58e-160 | 452 |
Msa0262700 | MtrunA17_Chr4g0045951 | 55.890 | 365 | 158 | 2 | 1 | 364 | 1 | 363 | 9.25e-153 | 434 |
Msa0262700 | MtrunA17_Chr4g0045941 | 55.464 | 366 | 146 | 3 | 1 | 364 | 1 | 351 | 7.17e-149 | 424 |
Msa0262700 | MtrunA17_Chr3g0097891 | 54.829 | 321 | 142 | 2 | 47 | 364 | 31 | 351 | 1.77e-133 | 385 |
Msa0262700 | MtrunA17_Chr2g0314801 | 55.799 | 319 | 137 | 3 | 46 | 360 | 32 | 350 | 2.28e-131 | 380 |
Msa0262700 | MtrunA17_Chr3g0085071 | 52.905 | 327 | 153 | 1 | 38 | 363 | 37 | 363 | 2.50e-130 | 377 |
Msa0262700 | MtrunA17_Chr3g0091031 | 50.746 | 335 | 164 | 1 | 30 | 363 | 14 | 348 | 8.87e-128 | 370 |
Msa0262700 | MtrunA17_Chr3g0085081 | 50.448 | 335 | 165 | 1 | 30 | 363 | 14 | 348 | 6.17e-126 | 365 |
Msa0262700 | MtrunA17_Chr5g0413851 | 51.497 | 334 | 156 | 4 | 35 | 364 | 29 | 360 | 1.39e-122 | 357 |
Msa0262700 | MtrunA17_Chr3g0105301 | 44.800 | 375 | 190 | 4 | 7 | 364 | 3 | 377 | 5.18e-116 | 342 |
Msa0262700 | MtrunA17_Chr5g0430371 | 44.236 | 373 | 167 | 5 | 17 | 364 | 44 | 400 | 3.86e-115 | 340 |
Msa0262700 | MtrunA17_Chr2g0314791 | 45.289 | 329 | 158 | 8 | 47 | 364 | 29 | 346 | 3.17e-101 | 303 |
Msa0262700 | MtrunA17_Chr1g0171171 | 42.609 | 345 | 174 | 8 | 34 | 363 | 40 | 375 | 3.94e-96 | 291 |
Msa0262700 | MtrunA17_Chr1g0210771 | 38.329 | 347 | 193 | 6 | 31 | 363 | 43 | 382 | 5.27e-92 | 280 |
Msa0262700 | MtrunA17_Chr1g0175671 | 38.400 | 375 | 204 | 6 | 15 | 364 | 138 | 510 | 4.72e-90 | 280 |
Msa0262700 | MtrunA17_Chr7g0258851 | 40.233 | 343 | 180 | 6 | 46 | 364 | 247 | 588 | 1.61e-89 | 281 |
Msa0262700 | MtrunA17_Chr4g0071391 | 37.318 | 343 | 186 | 6 | 46 | 363 | 108 | 446 | 3.88e-84 | 263 |
Msa0262700 | MtrunA17_Chr5g0413271 | 34.916 | 358 | 216 | 4 | 23 | 364 | 121 | 477 | 6.37e-82 | 258 |
Msa0262700 | MtrunA17_Chr4g0068111 | 38.710 | 372 | 197 | 10 | 23 | 364 | 84 | 454 | 8.36e-82 | 257 |
Msa0262700 | MtrunA17_Chr3g0113671 | 39.017 | 346 | 184 | 9 | 47 | 365 | 106 | 451 | 1.63e-81 | 256 |
Msa0262700 | MtrunA17_Chr7g0269991 | 39.759 | 332 | 176 | 8 | 47 | 359 | 137 | 463 | 2.73e-80 | 253 |
Msa0262700 | MtrunA17_Chr5g0437291 | 38.109 | 349 | 186 | 10 | 47 | 365 | 165 | 513 | 1.27e-78 | 250 |
Msa0262700 | MtrunA17_Chr1g0213281 | 36.827 | 353 | 193 | 8 | 39 | 364 | 167 | 516 | 1.30e-78 | 250 |
Msa0262700 | MtrunA17_Chr8g0368461 | 36.667 | 360 | 186 | 7 | 43 | 364 | 174 | 529 | 2.08e-77 | 248 |
Msa0262700 | MtrunA17_Chr3g0114101 | 34.085 | 399 | 227 | 10 | 2 | 364 | 33 | 431 | 1.57e-75 | 239 |
Msa0262700 | MtrunA17_Chr5g0437601 | 37.318 | 343 | 190 | 7 | 47 | 364 | 83 | 425 | 3.15e-75 | 239 |
Msa0262700 | MtrunA17_Chr4g0006991 | 34.293 | 382 | 209 | 10 | 24 | 363 | 46 | 427 | 3.06e-74 | 236 |
Msa0262700 | MtrunA17_Chr8g0360521 | 35.613 | 351 | 196 | 9 | 40 | 364 | 64 | 410 | 5.09e-71 | 228 |
Msa0262700 | MtrunA17_Chr1g0209921 | 48.261 | 230 | 110 | 7 | 44 | 268 | 41 | 266 | 2.24e-69 | 218 |
Msa0262700 | MtrunA17_Chr2g0287901 | 37.059 | 340 | 188 | 7 | 47 | 361 | 97 | 435 | 8.01e-69 | 223 |
Msa0262700 | MtrunA17_Chr7g0259711 | 36.812 | 345 | 189 | 8 | 47 | 364 | 91 | 433 | 2.77e-68 | 221 |
Msa0262700 | MtrunA17_Chr4g0005481 | 35.345 | 348 | 199 | 9 | 36 | 359 | 97 | 442 | 6.87e-68 | 220 |
Msa0262700 | MtrunA17_Chr4g0005491 | 32.665 | 349 | 206 | 8 | 45 | 364 | 60 | 408 | 9.26e-67 | 216 |
Msa0262700 | MtrunA17_Chr7g0243301 | 31.714 | 391 | 231 | 10 | 4 | 365 | 28 | 411 | 1.70e-66 | 216 |
Msa0262700 | MtrunA17_Chr7g0242701 | 35.838 | 346 | 195 | 9 | 44 | 363 | 83 | 427 | 4.74e-66 | 215 |
Msa0262700 | MtrunA17_Chr3g0126021 | 36.202 | 337 | 191 | 7 | 47 | 364 | 129 | 460 | 3.10e-62 | 206 |
Msa0262700 | MtrunA17_Chr8g0384151 | 30.117 | 342 | 219 | 6 | 38 | 364 | 81 | 417 | 2.90e-53 | 182 |
Msa0262700 | MtrunA17_Chr1g0178081 | 30.928 | 388 | 181 | 12 | 4 | 364 | 15 | 342 | 2.84e-50 | 172 |
Msa0262700 | MtrunA17_Chr6g0456691 | 28.753 | 393 | 232 | 11 | 4 | 363 | 42 | 419 | 2.42e-39 | 144 |
Msa0262700 | MtrunA17_Chr5g0414051 | 30.102 | 392 | 219 | 17 | 9 | 359 | 39 | 416 | 3.12e-38 | 142 |
Msa0262700 | MtrunA17_Chr5g0414061 | 31.339 | 351 | 195 | 16 | 46 | 359 | 93 | 434 | 6.89e-38 | 141 |
Msa0262700 | MtrunA17_Chr1g0188191 | 28.792 | 389 | 230 | 13 | 12 | 359 | 195 | 577 | 7.89e-38 | 143 |
Msa0262700 | MtrunA17_Chr6g0476041 | 27.632 | 380 | 233 | 11 | 16 | 359 | 137 | 510 | 1.74e-36 | 138 |
Msa0262700 | MtrunA17_Chr6g0456681 | 28.499 | 393 | 234 | 14 | 3 | 359 | 23 | 404 | 1.01e-34 | 132 |
Msa0262700 | MtrunA17_Chr6g0455901 | 30.725 | 345 | 204 | 12 | 47 | 359 | 71 | 412 | 2.46e-34 | 131 |
Msa0262700 | MtrunA17_Chr8g0384421 | 31.389 | 360 | 206 | 17 | 35 | 363 | 123 | 472 | 3.02e-34 | 131 |
Msa0262700 | MtrunA17_Chr5g0414091 | 30.636 | 346 | 204 | 11 | 47 | 359 | 85 | 427 | 5.97e-34 | 130 |
Msa0262700 | MtrunA17_Chr8g0347321 | 27.225 | 382 | 226 | 11 | 20 | 363 | 72 | 439 | 3.02e-33 | 128 |
Msa0262700 | MtrunA17_Chr2g0283851 | 28.940 | 349 | 203 | 13 | 48 | 359 | 56 | 396 | 6.13e-32 | 124 |
Msa0262700 | MtrunA17_Chr5g0414041 | 29.480 | 346 | 208 | 12 | 47 | 359 | 87 | 429 | 9.77e-32 | 124 |
Msa0262700 | MtrunA17_Chr7g0226991 | 28.022 | 364 | 215 | 14 | 33 | 358 | 43 | 397 | 2.96e-31 | 122 |
Msa0262700 | MtrunA17_Chr4g0049421 | 27.666 | 347 | 211 | 13 | 47 | 359 | 48 | 388 | 4.27e-30 | 119 |
Msa0262700 | MtrunA17_Chr8g0391481 | 26.862 | 376 | 228 | 13 | 22 | 359 | 2 | 368 | 5.14e-30 | 118 |
Msa0262700 | MtrunA17_Chr3g0085101 | 44.737 | 114 | 62 | 1 | 231 | 343 | 1 | 114 | 3.40e-29 | 109 |
Msa0262700 | MtrunA17_Chr4g0070341 | 29.395 | 347 | 208 | 15 | 47 | 363 | 132 | 471 | 4.58e-29 | 117 |
Msa0262700 | MtrunA17_Chr6g0451321 | 28.788 | 396 | 218 | 18 | 14 | 363 | 80 | 457 | 2.13e-28 | 115 |
Msa0262700 | MtrunA17_Chr8g0387921 | 27.066 | 351 | 215 | 13 | 44 | 359 | 71 | 415 | 1.15e-27 | 112 |
Msa0262700 | MtrunA17_Chr3g0140371 | 28.080 | 349 | 205 | 13 | 47 | 359 | 18 | 356 | 3.10e-27 | 110 |
Msa0262700 | MtrunA17_Chr7g0221271 | 36.719 | 128 | 81 | 0 | 46 | 173 | 78 | 205 | 1.60e-22 | 94.0 |
Msa0262700 | MtrunA17_Chr7g0221291 | 44.444 | 90 | 50 | 0 | 46 | 135 | 78 | 167 | 3.72e-22 | 92.0 |
Msa0262700 | MtrunA17_Chr5g0429211 | 38.532 | 109 | 60 | 2 | 74 | 176 | 162 | 269 | 1.84e-17 | 81.6 |
Msa0262700 | MtrunA17_Chr1g0209931 | 44.944 | 89 | 44 | 2 | 279 | 365 | 9 | 94 | 9.48e-17 | 75.1 |
Msa0262700 | MtrunA17_Chr2g0287931 | 32.773 | 119 | 66 | 3 | 107 | 211 | 2 | 120 | 1.94e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262700 | AT2G42570.1 | 65.988 | 344 | 110 | 3 | 28 | 364 | 22 | 365 | 5.72e-180 | 504 |
Msa0262700 | AT2G31110.2 | 62.928 | 321 | 118 | 1 | 44 | 363 | 42 | 362 | 8.82e-166 | 468 |
Msa0262700 | AT1G29050.1 | 59.882 | 339 | 134 | 2 | 27 | 363 | 40 | 378 | 1.20e-157 | 447 |
Msa0262700 | AT2G34070.1 | 57.681 | 345 | 138 | 4 | 27 | 363 | 39 | 383 | 2.38e-150 | 429 |
Msa0262700 | AT3G14850.2 | 55.108 | 323 | 141 | 2 | 42 | 360 | 29 | 351 | 4.11e-131 | 379 |
Msa0262700 | AT1G78710.1 | 49.254 | 335 | 164 | 4 | 34 | 364 | 25 | 357 | 9.80e-122 | 356 |
Msa0262700 | AT2G30900.1 | 50.000 | 324 | 156 | 4 | 47 | 364 | 43 | 366 | 1.27e-119 | 350 |
Msa0262700 | AT2G34070.2 | 60.643 | 249 | 96 | 2 | 117 | 363 | 1 | 249 | 1.87e-111 | 325 |
Msa0262700 | AT5G58600.1 | 47.619 | 336 | 158 | 5 | 47 | 364 | 66 | 401 | 1.44e-110 | 329 |
Msa0262700 | AT2G31110.3 | 61.927 | 218 | 83 | 0 | 44 | 261 | 42 | 259 | 8.41e-108 | 317 |
Msa0262700 | AT2G30010.2 | 45.322 | 342 | 163 | 5 | 47 | 364 | 99 | 440 | 3.12e-105 | 317 |
Msa0262700 | AT2G30010.1 | 45.322 | 342 | 163 | 5 | 47 | 364 | 56 | 397 | 3.40e-105 | 315 |
Msa0262700 | AT2G31110.1 | 63.768 | 207 | 74 | 1 | 158 | 363 | 8 | 214 | 4.25e-104 | 305 |
Msa0262700 | AT3G14850.1 | 55.242 | 248 | 107 | 2 | 117 | 360 | 1 | 248 | 2.28e-95 | 285 |
Msa0262700 | AT3G54260.1 | 42.515 | 334 | 167 | 6 | 47 | 364 | 51 | 375 | 7.72e-92 | 280 |
Msa0262700 | AT5G06700.1 | 42.274 | 343 | 171 | 7 | 47 | 364 | 255 | 595 | 4.26e-91 | 285 |
Msa0262700 | AT3G12060.1 | 39.678 | 373 | 197 | 7 | 19 | 364 | 165 | 536 | 1.83e-89 | 280 |
Msa0262700 | AT1G78710.2 | 39.665 | 358 | 151 | 6 | 11 | 364 | 1 | 297 | 4.09e-88 | 268 |
Msa0262700 | AT2G30900.2 | 50.424 | 236 | 109 | 3 | 47 | 280 | 43 | 272 | 1.19e-84 | 258 |
Msa0262700 | AT3G62390.1 | 39.650 | 343 | 186 | 7 | 41 | 364 | 132 | 472 | 3.34e-82 | 258 |
Msa0262700 | AT5G58600.2 | 51.786 | 224 | 106 | 2 | 47 | 268 | 66 | 289 | 6.20e-82 | 252 |
Msa0262700 | AT5G20590.1 | 38.571 | 350 | 184 | 9 | 41 | 364 | 136 | 480 | 9.04e-82 | 258 |
Msa0262700 | AT5G49340.1 | 37.960 | 353 | 190 | 8 | 39 | 364 | 92 | 442 | 1.15e-80 | 254 |
Msa0262700 | AT1G60790.1 | 38.211 | 369 | 194 | 10 | 26 | 364 | 169 | 533 | 3.97e-80 | 255 |
Msa0262700 | AT3G55990.1 | 36.565 | 361 | 199 | 10 | 35 | 365 | 125 | 485 | 3.34e-77 | 246 |
Msa0262700 | AT2G40150.1 | 35.977 | 353 | 193 | 8 | 46 | 365 | 70 | 422 | 8.92e-76 | 240 |
Msa0262700 | AT3G11030.1 | 38.000 | 350 | 179 | 10 | 47 | 364 | 106 | 449 | 9.19e-75 | 238 |
Msa0262700 | AT2G40160.2 | 35.817 | 349 | 192 | 9 | 47 | 364 | 77 | 424 | 3.48e-74 | 237 |
Msa0262700 | AT2G40160.1 | 35.569 | 343 | 191 | 8 | 47 | 359 | 77 | 419 | 4.81e-74 | 236 |
Msa0262700 | AT1G73140.1 | 36.441 | 354 | 195 | 8 | 37 | 364 | 57 | 406 | 4.46e-73 | 233 |
Msa0262700 | AT5G19160.1 | 36.119 | 371 | 194 | 10 | 24 | 361 | 82 | 442 | 1.78e-72 | 233 |
Msa0262700 | AT5G01360.2 | 35.756 | 344 | 195 | 7 | 46 | 363 | 35 | 378 | 4.99e-72 | 229 |
Msa0262700 | AT5G01360.1 | 35.756 | 344 | 195 | 7 | 46 | 363 | 91 | 434 | 2.54e-71 | 229 |
Msa0262700 | AT5G01620.2 | 34.402 | 343 | 198 | 8 | 42 | 359 | 105 | 445 | 1.13e-70 | 228 |
Msa0262700 | AT5G01620.1 | 34.402 | 343 | 198 | 8 | 42 | 359 | 105 | 445 | 1.13e-70 | 228 |
Msa0262700 | AT5G01620.3 | 34.402 | 343 | 198 | 8 | 42 | 359 | 113 | 453 | 1.14e-70 | 228 |
Msa0262700 | AT2G40320.1 | 35.632 | 348 | 199 | 8 | 42 | 364 | 76 | 423 | 7.39e-70 | 225 |
Msa0262700 | AT3G06080.2 | 36.550 | 342 | 189 | 7 | 47 | 361 | 103 | 443 | 1.43e-69 | 226 |
Msa0262700 | AT5G06230.2 | 35.294 | 357 | 202 | 7 | 36 | 364 | 10 | 365 | 1.14e-67 | 218 |
Msa0262700 | AT5G06230.1 | 35.294 | 357 | 202 | 7 | 36 | 364 | 51 | 406 | 2.20e-67 | 218 |
Msa0262700 | AT3G11570.1 | 37.538 | 325 | 180 | 7 | 63 | 365 | 98 | 421 | 5.63e-67 | 218 |
Msa0262700 | AT2G38320.1 | 33.333 | 351 | 204 | 9 | 44 | 364 | 55 | 405 | 3.40e-64 | 210 |
Msa0262700 | AT1G48880.1 | 33.973 | 365 | 194 | 8 | 21 | 364 | 102 | 440 | 4.43e-62 | 205 |
Msa0262700 | AT3G62390.2 | 39.095 | 243 | 136 | 4 | 41 | 271 | 132 | 374 | 4.89e-57 | 191 |
Msa0262700 | AT5G20590.2 | 39.431 | 246 | 128 | 7 | 41 | 269 | 136 | 377 | 1.58e-55 | 186 |
Msa0262700 | AT5G19160.2 | 36.538 | 260 | 145 | 4 | 24 | 269 | 82 | 335 | 2.99e-53 | 180 |
Msa0262700 | AT2G38320.2 | 31.056 | 322 | 194 | 7 | 71 | 364 | 1 | 322 | 3.94e-53 | 179 |
Msa0262700 | AT2G40160.3 | 35.470 | 234 | 139 | 4 | 47 | 268 | 77 | 310 | 3.84e-50 | 171 |
Msa0262700 | AT3G06080.1 | 37.131 | 237 | 135 | 3 | 47 | 269 | 103 | 339 | 4.01e-49 | 169 |
Msa0262700 | AT5G06230.3 | 35.433 | 254 | 144 | 4 | 36 | 269 | 51 | 304 | 7.70e-46 | 159 |
Msa0262700 | AT1G70230.1 | 29.513 | 349 | 198 | 11 | 47 | 363 | 79 | 411 | 6.94e-40 | 146 |
Msa0262700 | AT2G14530.1 | 29.049 | 389 | 240 | 12 | 7 | 363 | 22 | 406 | 8.09e-40 | 146 |
Msa0262700 | AT5G51640.1 | 28.307 | 378 | 223 | 11 | 23 | 359 | 114 | 484 | 9.55e-40 | 147 |
Msa0262700 | AT4G25360.1 | 28.165 | 387 | 216 | 12 | 19 | 359 | 150 | 520 | 2.30e-37 | 141 |
Msa0262700 | AT4G25360.2 | 28.165 | 387 | 216 | 12 | 19 | 359 | 150 | 520 | 2.30e-37 | 141 |
Msa0262700 | AT5G64020.1 | 29.494 | 356 | 208 | 12 | 47 | 363 | 57 | 408 | 6.33e-35 | 132 |
Msa0262700 | AT5G64470.3 | 26.744 | 344 | 223 | 10 | 47 | 364 | 55 | 395 | 1.61e-34 | 131 |
Msa0262700 | AT1G01430.1 | 28.609 | 381 | 223 | 12 | 28 | 365 | 75 | 449 | 1.32e-33 | 130 |
Msa0262700 | AT5G64470.2 | 26.857 | 350 | 221 | 11 | 47 | 364 | 55 | 401 | 3.71e-33 | 127 |
Msa0262700 | AT5G15890.1 | 28.065 | 367 | 219 | 12 | 25 | 359 | 165 | 518 | 1.48e-32 | 128 |
Msa0262700 | AT2G37720.1 | 30.939 | 362 | 183 | 14 | 47 | 363 | 143 | 482 | 3.95e-32 | 126 |
Msa0262700 | AT5G15900.1 | 26.934 | 349 | 217 | 11 | 47 | 363 | 67 | 409 | 3.97e-32 | 125 |
Msa0262700 | AT5G15900.2 | 26.934 | 349 | 217 | 11 | 47 | 363 | 86 | 428 | 5.17e-32 | 125 |
Msa0262700 | AT5G20680.6 | 29.111 | 371 | 222 | 14 | 26 | 363 | 95 | 457 | 7.56e-32 | 125 |
Msa0262700 | AT5G20680.2 | 29.111 | 371 | 222 | 14 | 26 | 363 | 171 | 533 | 1.57e-31 | 125 |
Msa0262700 | AT5G20680.4 | 29.111 | 371 | 222 | 14 | 26 | 363 | 189 | 551 | 2.12e-31 | 125 |
Msa0262700 | AT5G20680.1 | 29.111 | 371 | 222 | 14 | 26 | 363 | 189 | 551 | 2.12e-31 | 125 |
Msa0262700 | AT5G20680.3 | 29.111 | 371 | 222 | 14 | 26 | 363 | 189 | 551 | 2.12e-31 | 125 |
Msa0262700 | AT5G20680.5 | 29.111 | 371 | 222 | 14 | 26 | 363 | 189 | 551 | 2.12e-31 | 125 |
Msa0262700 | AT3G28150.1 | 30.966 | 352 | 199 | 16 | 46 | 363 | 69 | 410 | 3.10e-31 | 122 |
Msa0262700 | AT3G02440.1 | 26.513 | 347 | 212 | 12 | 47 | 359 | 127 | 464 | 5.40e-31 | 123 |
Msa0262700 | AT3G02440.2 | 26.513 | 347 | 212 | 12 | 47 | 359 | 135 | 472 | 5.41e-31 | 123 |
Msa0262700 | AT4G11090.1 | 25.679 | 405 | 243 | 15 | 8 | 365 | 35 | 428 | 1.32e-28 | 115 |
Msa0262700 | AT4G01080.1 | 27.624 | 362 | 215 | 12 | 33 | 359 | 77 | 426 | 8.11e-28 | 113 |
Msa0262700 | AT4G23790.1 | 25.683 | 366 | 213 | 14 | 46 | 365 | 78 | 430 | 6.12e-23 | 99.8 |
Msa0262700 | AT5G64470.4 | 26.378 | 254 | 166 | 8 | 47 | 282 | 55 | 305 | 5.41e-21 | 92.8 |
Msa0262700 | AT5G64470.1 | 26.378 | 254 | 166 | 8 | 47 | 282 | 55 | 305 | 7.65e-21 | 92.4 |
Find 95 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTCATGCAGCTCTCTT+TGG | 0.210145 | 2_2:-61725598 | Msa0262700:CDS |
TCTATTCCGCACACCATATT+TGG | 0.219542 | 2_2:-61727001 | Msa0262700:CDS |
TTGTAATTGGATAATAAAAT+TGG | 0.234987 | 2_2:-61725468 | Msa0262700:three_prime_UTR |
TTTGAAAGTGACAGTTAAAT+AGG | 0.236024 | 2_2:-61725171 | Msa0262700:three_prime_UTR |
TATCTCCACAATAACATTTC+AGG | 0.240854 | 2_2:-61729686 | Msa0262700:intron |
TACAACAAAACATTATAAAA+AGG | 0.250704 | 2_2:-61730473 | Msa0262700:five_prime_UTR |
AGGATCGAAACCCAAGAAAA+TGG | 0.260094 | 2_2:-61730399 | Msa0262700:exon |
TCCAAAAGTGACACTTAAAA+AGG | 0.260629 | 2_2:-61725135 | Msa0262700:three_prime_UTR |
AGAGAAACACAACCATTCTT+TGG | 0.302957 | 2_2:-61725823 | Msa0262700:CDS |
CGGTCAAGGTCTACCAAATA+TGG | 0.307611 | 2_2:+61726988 | None:intergenic |
GTTTGACAACTTGGGCTAGA+TGG | 0.309964 | 2_2:-61726392 | Msa0262700:CDS |
TAGCATGTATGATTCATTCT+TGG | 0.316438 | 2_2:-61729747 | Msa0262700:CDS |
TGTAGTCATTGGTGTCTTCC+AGG | 0.323483 | 2_2:-61725643 | Msa0262700:CDS |
CAATGCAAAGAACCTTCCTT+TGG | 0.334400 | 2_2:-61725095 | Msa0262700:three_prime_UTR |
GTGTGCGGAATAGAAATAAT+TGG | 0.347634 | 2_2:+61727010 | None:intergenic |
CAAGCCATTGGTGTTCCTGC+TGG | 0.351195 | 2_2:+61725790 | None:intergenic |
TCTACAAAGGTTTGACAACT+TGG | 0.354769 | 2_2:-61726401 | Msa0262700:CDS |
AGAAGAACATTCCAAGTATC+AGG | 0.357411 | 2_2:+61725616 | None:intergenic |
TTCCAGGACTTCCTGATACT+TGG | 0.372897 | 2_2:-61725627 | Msa0262700:CDS |
CTTTGGTTGAAGTAGTGAAT+TGG | 0.375458 | 2_2:-61725581 | Msa0262700:exon |
CAATTCAATTGTCAAAAGTA+TGG | 0.391925 | 2_2:-61730161 | Msa0262700:CDS |
TATTTCTGATACTGAGTATC+AGG | 0.397938 | 2_2:+61730134 | None:intergenic |
ACCTTGACCGTGAGAACATT+GGG | 0.399023 | 2_2:-61726975 | Msa0262700:CDS |
AGCATGTATGATTCATTCTT+GGG | 0.407416 | 2_2:-61729746 | Msa0262700:CDS |
AAGAAGACCTTGGTTTGAGC+TGG | 0.426020 | 2_2:+61726351 | None:intergenic |
GTAACTGGTTTCGTGGCAAA+TGG | 0.428187 | 2_2:-61730241 | Msa0262700:CDS |
GTTTCGATCCTCTCTGTTGA+AGG | 0.431671 | 2_2:+61730411 | None:intergenic |
CTCAGTATCAGAAATATAGA+TGG | 0.444563 | 2_2:-61730127 | Msa0262700:CDS |
TGCCAACAGATTGTAGTCAT+TGG | 0.444942 | 2_2:-61725654 | Msa0262700:CDS |
GGTAAATTAGGGGAAGAGAT+TGG | 0.447594 | 2_2:-61725870 | Msa0262700:intron |
TTCCTATGGTAGAAAACAAT+GGG | 0.449400 | 2_2:+61725519 | None:intergenic |
ATCCTCTCTGTTGAAGGAAA+AGG | 0.451476 | 2_2:+61730417 | None:intergenic |
ACCATAGGAATTATTTAACT+TGG | 0.452262 | 2_2:-61725506 | Msa0262700:three_prime_UTR |
AGCAGGAACACCAATGGCTT+GGG | 0.461353 | 2_2:-61725788 | Msa0262700:CDS |
AACTCGCTGGAAGATGTAAC+TGG | 0.464742 | 2_2:-61730256 | Msa0262700:CDS |
TACATGCTAGTGAATTGAAC+TGG | 0.471439 | 2_2:+61729761 | None:intergenic |
TTTGACAACTTGGGCTAGAT+GGG | 0.479154 | 2_2:-61726391 | Msa0262700:CDS |
TTCACTATCACCCAAGCCAT+TGG | 0.480458 | 2_2:+61725778 | None:intergenic |
ATAACACTACTATACCCTTC+TGG | 0.481855 | 2_2:+61725676 | None:intergenic |
CATTGGGCGTGTTCTAAAGT+TGG | 0.484902 | 2_2:-61726959 | Msa0262700:CDS |
CGTTTCATTGCTTTCTACAA+AGG | 0.485511 | 2_2:-61726414 | Msa0262700:CDS |
ATTGAATTGTGGATCTATGA+AGG | 0.486450 | 2_2:+61730175 | None:intergenic |
ATATGTTTCTTAATTAGTCC+AGG | 0.487004 | 2_2:-61725546 | Msa0262700:three_prime_UTR |
TTCCAAGTATCAGGAAGTCC+TGG | 0.489986 | 2_2:+61725625 | None:intergenic |
GGATCGAAACCCAAGAAAAT+GGG | 0.490190 | 2_2:-61730398 | Msa0262700:exon |
GCCAAGTTAAATAATTCCTA+TGG | 0.499275 | 2_2:+61725505 | None:intergenic |
CAGCAGGAACACCAATGGCT+TGG | 0.502272 | 2_2:-61725789 | Msa0262700:CDS |
AAGCCATTGGTGTTCCTGCT+GGG | 0.502968 | 2_2:+61725791 | None:intergenic |
CGGTTGTGCATTTCCAGTGT+GGG | 0.509875 | 2_2:+61726867 | None:intergenic |
ATGGAGAGGAATGGATGTAT+TGG | 0.512382 | 2_2:-61726914 | Msa0262700:CDS |
CTACAAAGGTTTGACAACTT+GGG | 0.514996 | 2_2:-61726400 | Msa0262700:CDS |
TAACTGGTTTCGTGGCAAAT+GGG | 0.526407 | 2_2:-61730240 | Msa0262700:CDS |
CTCATTACTAGTACTGGAAA+CGG | 0.528540 | 2_2:+61730283 | None:intergenic |
GATAGCACTTTGCTTTGAGA+AGG | 0.530854 | 2_2:+61729705 | None:intergenic |
CTTTGTAGAAAGCAATGAAA+CGG | 0.532137 | 2_2:+61726415 | None:intergenic |
TGGCATTGGTGGACCCACAC+TGG | 0.546946 | 2_2:-61726880 | Msa0262700:CDS |
TTTGGAATATAACGTGGTGA+TGG | 0.547017 | 2_2:-61725077 | Msa0262700:three_prime_UTR |
GACCTTGACCGTGAGAACAT+TGG | 0.550954 | 2_2:-61726976 | Msa0262700:CDS |
TCTATGAAGGGACAAGAAGA+AGG | 0.551169 | 2_2:+61730188 | None:intergenic |
ATTCCTATGGTAGAAAACAA+TGG | 0.552378 | 2_2:+61725518 | None:intergenic |
GGTAGTTGTTGCTGTTGTGT+TGG | 0.556553 | 2_2:+61730304 | None:intergenic |
GGAAGATGTAACTGGTTTCG+TGG | 0.558355 | 2_2:-61730248 | Msa0262700:CDS |
GAAAAGATGCACATCCAGAA+GGG | 0.559145 | 2_2:-61725690 | Msa0262700:CDS |
TTTGGTTTGAAGTACCCAGC+AGG | 0.566621 | 2_2:-61725805 | Msa0262700:CDS |
CAGATGGGATTATATTCAAG+AGG | 0.567446 | 2_2:-61726463 | Msa0262700:CDS |
GGATCATAGAGAGGATACGA+AGG | 0.570131 | 2_2:+61730209 | None:intergenic |
GGGTACTTCAAACCAAAGAA+TGG | 0.571214 | 2_2:+61725811 | None:intergenic |
CCACGTTATATTCCAAAGGA+AGG | 0.573519 | 2_2:+61725083 | None:intergenic |
TGAAGTAGTGAATTGGAAAG+TGG | 0.573720 | 2_2:-61725574 | Msa0262700:three_prime_UTR |
CTTTCACTTGTTCTATACCA+AGG | 0.575010 | 2_2:-61730100 | Msa0262700:intron |
ACTAACCTGAAATGTTATTG+TGG | 0.576103 | 2_2:+61729681 | None:intergenic |
CAATAAAGAGTGGTAATGCA+TGG | 0.581612 | 2_2:-61726933 | Msa0262700:CDS |
ACGGTTGTGCATTTCCAGTG+TGG | 0.583332 | 2_2:+61726866 | None:intergenic |
AGAAAAGATGCACATCCAGA+AGG | 0.583703 | 2_2:-61725691 | Msa0262700:CDS |
TGGTAATGCATGGAGAGGAA+TGG | 0.587257 | 2_2:-61726923 | Msa0262700:CDS |
CACCAATGACTACAATCTGT+TGG | 0.588126 | 2_2:+61725652 | None:intergenic |
GCCCAATGTTCTCACGGTCA+AGG | 0.590015 | 2_2:+61726974 | None:intergenic |
AAGAGTGGTAATGCATGGAG+AGG | 0.592479 | 2_2:-61726928 | Msa0262700:CDS |
AGTAATGAGAGAAAACTCGC+TGG | 0.595143 | 2_2:-61730269 | Msa0262700:CDS |
ACAACTTACTCGTAATGCAC+AGG | 0.597709 | 2_2:+61726315 | None:intergenic |
AGATGGGATTATATTCAAGA+GGG | 0.599517 | 2_2:-61726462 | Msa0262700:CDS |
TTGAATTGTGGATCTATGAA+GGG | 0.607685 | 2_2:+61730176 | None:intergenic |
TGTAAATCCAGCTCAAACCA+AGG | 0.609530 | 2_2:-61726358 | Msa0262700:CDS |
ATCACCACGTTATATTCCAA+AGG | 0.614742 | 2_2:+61725079 | None:intergenic |
CTTGGTATAGAACAAGTGAA+AGG | 0.623660 | 2_2:+61730101 | None:intergenic |
CCTTCCTTTGGAATATAACG+TGG | 0.626830 | 2_2:-61725083 | Msa0262700:three_prime_UTR |
GAACACGCCCAATGTTCTCA+CGG | 0.633134 | 2_2:+61726968 | None:intergenic |
TTATATTCAAGAGGGTGGCA+AGG | 0.635985 | 2_2:-61726454 | Msa0262700:CDS |
TGGGATTATATTCAAGAGGG+TGG | 0.638991 | 2_2:-61726459 | Msa0262700:CDS |
CAAGAAGAAGGATCATAGAG+AGG | 0.640153 | 2_2:+61730200 | None:intergenic |
GTACCCAGCAGGAACACCAA+TGG | 0.661011 | 2_2:-61725794 | Msa0262700:CDS |
GGTCTACCAAATATGGTGTG+CGG | 0.672109 | 2_2:+61726995 | None:intergenic |
GATCATAGAGAGGATACGAA+GGG | 0.672935 | 2_2:+61730210 | None:intergenic |
GTCACATCTAGAAAATACAC+TGG | 0.675733 | 2_2:+61725730 | None:intergenic |
AAGTTGGACTCAATAAAGAG+TGG | 0.679146 | 2_2:-61726943 | Msa0262700:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAAAAATACATTTATTG+GGG | - | chr2_2:61726363-61726382 | Msa0262700:CDS | 10.0% |
!! | TTATAAAAAGTTACTATTTA+TGG | - | chr2_2:61726627-61726646 | Msa0262700:intron | 10.0% |
!!! | AAAAATACAAATTTCATTTT+TGG | + | chr2_2:61726949-61726968 | None:intergenic | 10.0% |
!!! | CTATATATTTTATTCATTAT+AGG | - | chr2_2:61727817-61727836 | Msa0262700:intron | 10.0% |
!!! | TTATTATTTGAATTATTTTC+AGG | - | chr2_2:61728456-61728475 | Msa0262700:intron | 10.0% |
!! | TTTATCAACTATATTTATAA+TGG | - | chr2_2:61729594-61729613 | Msa0262700:intron | 10.0% |
!!! | TGTAAATTTTCATATTATTT+TGG | - | chr2_2:61730077-61730096 | Msa0262700:intron | 10.0% |
!! | TACAACAAAACATTATAAAA+AGG | - | chr2_2:61725026-61725045 | Msa0262700:three_prime_UTR | 15.0% |
!!! | TTTGATACTTTTGAATTTAA+TGG | - | chr2_2:61725882-61725901 | Msa0262700:intron | 15.0% |
!!! | ATTTTTATTATTTTCCATGT+TGG | - | chr2_2:61726106-61726125 | Msa0262700:intron | 15.0% |
!! | TTAAAAAATACATTTATTGG+GGG | - | chr2_2:61726364-61726383 | Msa0262700:CDS | 15.0% |
!! | GTAAATAAATTATATGTTAG+TGG | - | chr2_2:61727180-61727199 | Msa0262700:intron | 15.0% |
!! | AGAATAATACAATATTAGTA+TGG | - | chr2_2:61727206-61727225 | Msa0262700:intron | 15.0% |
!!! | GATCATGAATATAATTTTAT+TGG | + | chr2_2:61727391-61727410 | None:intergenic | 15.0% |
!! | TACTAAAGTTTCTATATAAA+GGG | + | chr2_2:61727433-61727452 | None:intergenic | 15.0% |
!! | TTACTAAAGTTTCTATATAA+AGG | + | chr2_2:61727434-61727453 | None:intergenic | 15.0% |
!! | ACAAAAAATAAAATTTGAAG+TGG | - | chr2_2:61727755-61727774 | Msa0262700:intron | 15.0% |
!!! | CAAAAAATAAAATTTGAAGT+GGG | - | chr2_2:61727756-61727775 | Msa0262700:intron | 15.0% |
!! | AATATAAATTACTAGAAGAA+AGG | + | chr2_2:61728095-61728114 | None:intergenic | 15.0% |
!! | ATGTACAATTATTATATGTA+AGG | - | chr2_2:61728248-61728267 | Msa0262700:intron | 15.0% |
!!! | ATTAATTAGTTGTTGTTTTT+TGG | - | chr2_2:61728708-61728727 | Msa0262700:intron | 15.0% |
!!! | TTAATTAGTTGTTGTTTTTT+GGG | - | chr2_2:61728709-61728728 | Msa0262700:intron | 15.0% |
!!! | TGTTGATGAAAATTTTTATA+GGG | + | chr2_2:61728812-61728831 | None:intergenic | 15.0% |
!!! | ATGTTGATGAAAATTTTTAT+AGG | + | chr2_2:61728813-61728832 | None:intergenic | 15.0% |
!!! | AATGTTTTTTTACAGAATTA+CGG | - | chr2_2:61729255-61729274 | Msa0262700:intron | 15.0% |
!!! | TTTTGAGTTATTATTGTAAT+TGG | - | chr2_2:61730018-61730037 | Msa0262700:intron | 15.0% |
!! | TTGTAATTGGATAATAAAAT+TGG | - | chr2_2:61730031-61730050 | Msa0262700:intron | 15.0% |
!! | AATAAGATATTAAATGACTA+AGG | + | chr2_2:61730235-61730254 | None:intergenic | 15.0% |
!! | TTAGAAAATGAAAATGTGTT+TGG | - | chr2_2:61725629-61725648 | Msa0262700:CDS | 20.0% |
!!! | AATGTGTTTGGTATTTTTTT+AGG | - | chr2_2:61725641-61725660 | Msa0262700:CDS | 20.0% |
!!! | AAATTATGTTGGTTATGTTT+TGG | - | chr2_2:61725910-61725929 | Msa0262700:intron | 20.0% |
!! | TTTGAAGAAAAACAAAACAT+GGG | + | chr2_2:61726031-61726050 | None:intergenic | 20.0% |
!! | ATTTGAAGAAAAACAAAACA+TGG | + | chr2_2:61726032-61726051 | None:intergenic | 20.0% |
!! | TTATGAAAAAACTATTACCA+TGG | + | chr2_2:61726260-61726279 | None:intergenic | 20.0% |
!! | ATTACTATCTATTATTACCA+TGG | + | chr2_2:61726289-61726308 | None:intergenic | 20.0% |
!! | TAAAAAATACATTTATTGGG+GGG | - | chr2_2:61726365-61726384 | Msa0262700:CDS | 20.0% |
!! | TGGTTGTTATGATTATTTAA+TGG | - | chr2_2:61726497-61726516 | Msa0262700:intron | 20.0% |
!! | AACAAGCATCTATTAAATAA+GGG | + | chr2_2:61726689-61726708 | None:intergenic | 20.0% |
!! | TAACAAGCATCTATTAAATA+AGG | + | chr2_2:61726690-61726709 | None:intergenic | 20.0% |
!! | TAAAAAAAGATACAAACTAG+TGG | - | chr2_2:61727229-61727248 | Msa0262700:intron | 20.0% |
!!! | TTTTTTTTTTGTTGTGAAAC+CGG | + | chr2_2:61727315-61727334 | None:intergenic | 20.0% |
!!! | ATTAGCAATAATTAGTGTTT+TGG | - | chr2_2:61727465-61727484 | Msa0262700:intron | 20.0% |
!! | TGATCATTACAGTTTAAAAA+GGG | + | chr2_2:61727585-61727604 | None:intergenic | 20.0% |
!! | TTGATCATTACAGTTTAAAA+AGG | + | chr2_2:61727586-61727605 | None:intergenic | 20.0% |
!! | GCTATTCACATTAAAAAAAT+AGG | - | chr2_2:61727701-61727720 | Msa0262700:intron | 20.0% |
!! | GTACTACAATTTAATTCATA+TGG | + | chr2_2:61727782-61727801 | None:intergenic | 20.0% |
!! | TTCTAGTAATTTATATTCCA+TGG | - | chr2_2:61728098-61728117 | Msa0262700:intron | 20.0% |
!!! | AACTTTTATAAATCAACTGA+CGG | + | chr2_2:61728301-61728320 | None:intergenic | 20.0% |
!!! | TTGAATTATTTTCAGGATTA+TGG | - | chr2_2:61728463-61728482 | Msa0262700:intron | 20.0% |
!! | CATAATCAATTCTGTTATTA+AGG | - | chr2_2:61728680-61728699 | Msa0262700:intron | 20.0% |
!! | CAAAACTGTGAATATTTATA+GGG | + | chr2_2:61728971-61728990 | None:intergenic | 20.0% |
!! | ACAAAACTGTGAATATTTAT+AGG | + | chr2_2:61728970-61728989 | None:intergenic | 20.0% |
!!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr2_2:61728940-61728959 | None:intergenic | 20.0% |
!!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr2_2:61728939-61728958 | None:intergenic | 20.0% |
!!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr2_2:61728939-61728958 | Msa0262700:intron | 20.0% |
!!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr2_2:61728940-61728959 | Msa0262700:intron | 20.0% |
!! | ACAAAACTGTGAATATTTAT+AGG | - | chr2_2:61728970-61728989 | Msa0262700:intron | 20.0% |
!! | CAAAACTGTGAATATTTATA+GGG | - | chr2_2:61728971-61728990 | Msa0262700:intron | 20.0% |
!! | ATCAAATGTCAAAAAAACAA+GGG | + | chr2_2:61729014-61729033 | None:intergenic | 20.0% |
!! | AATCAAATGTCAAAAAAACA+AGG | + | chr2_2:61729015-61729034 | None:intergenic | 20.0% |
!!! | TTTTAAATTTCAGTAGAATC+AGG | - | chr2_2:61729291-61729310 | Msa0262700:intron | 20.0% |
!! | TTTAAATTTCAGTAGAATCA+GGG | - | chr2_2:61729292-61729311 | Msa0262700:intron | 20.0% |
!! | AAAGAAATCATTAGAATGTT+TGG | - | chr2_2:61729380-61729399 | Msa0262700:intron | 20.0% |
!! | ATAAAACTTAGTCTAGTAAT+TGG | + | chr2_2:61729579-61729598 | None:intergenic | 20.0% |
!! | TTATAATGGTGTATGATATT+TGG | - | chr2_2:61729608-61729627 | Msa0262700:intron | 20.0% |
!! | TGTATGATATTTGGTAAATT+AGG | - | chr2_2:61729617-61729636 | Msa0262700:intron | 20.0% |
!! | GTATGATATTTGGTAAATTA+GGG | - | chr2_2:61729618-61729637 | Msa0262700:intron | 20.0% |
!! | TATGATATTTGGTAAATTAG+GGG | - | chr2_2:61729619-61729638 | Msa0262700:intron | 20.0% |
!! | TCTCCACAATAAATAATTAA+GGG | - | chr2_2:61730268-61730287 | Msa0262700:CDS | 20.0% |
!! | TTACCCTTAATTATTTATTG+TGG | + | chr2_2:61730274-61730293 | None:intergenic | 20.0% |
!! | TAAATAATTAAGGGTAATGT+TGG | - | chr2_2:61730277-61730296 | Msa0262700:CDS | 20.0% |
!! | TAAATTCAAGAGCTTTTGTT+TGG | + | chr2_2:61725172-61725191 | None:intergenic | 25.0% |
!! | TACTTTTGACAATTGAATTG+TGG | + | chr2_2:61725338-61725357 | None:intergenic | 25.0% |
! | CAATTCAATTGTCAAAAGTA+TGG | - | chr2_2:61725338-61725357 | Msa0262700:intron | 25.0% |
! | TAAGTAGCTAGTATAATGTT+TGG | + | chr2_2:61725555-61725574 | None:intergenic | 25.0% |
!!! | TTTTTTTAGGTTCAATGCAT+TGG | - | chr2_2:61725654-61725673 | Msa0262700:CDS | 25.0% |
! | GGAAAAAAGATTATGTTTGT+TGG | - | chr2_2:61725697-61725716 | Msa0262700:CDS | 25.0% |
!! | TAATGGTAGTGAAATTATGT+TGG | - | chr2_2:61725899-61725918 | Msa0262700:intron | 25.0% |
! | ACTCAATAAAGTTTCCAATT+AGG | + | chr2_2:61725987-61726006 | None:intergenic | 25.0% |
!! | TTATTCTTTAAAAATGTCCC+CGG | + | chr2_2:61726195-61726214 | None:intergenic | 25.0% |
! | TAATAAATGTGAATCTTCCA+TGG | - | chr2_2:61726212-61726231 | Msa0262700:intron | 25.0% |
! | GTAAATGATAGTAATAACCA+TGG | + | chr2_2:61726232-61726251 | None:intergenic | 25.0% |
!!! | TTTTTTCATAAGAAATGCCA+TGG | - | chr2_2:61726269-61726288 | Msa0262700:intron | 25.0% |
!! | AACATATTTTCCTCTTACAA+AGG | - | chr2_2:61726323-61726342 | Msa0262700:intron | 25.0% |
!! | GTTTTTAAATCCTTTGTAAG+AGG | + | chr2_2:61726336-61726355 | None:intergenic | 25.0% |
! | ATAGAACACCAAATATAAGA+CGG | + | chr2_2:61726904-61726923 | None:intergenic | 25.0% |
!!! | AGAAAAAGGCACTATATATT+AGG | + | chr2_2:61727348-61727367 | None:intergenic | 25.0% |
! | AGTTTCTATATAAAGGGAAA+AGG | + | chr2_2:61727427-61727446 | None:intergenic | 25.0% |
! | TTACTACTAATGATGATTGT+TGG | + | chr2_2:61727511-61727530 | None:intergenic | 25.0% |
! | GATCATTACAGTTTAAAAAG+GGG | + | chr2_2:61727584-61727603 | None:intergenic | 25.0% |
! | TTGATTGATGCTTATATCAA+GGG | + | chr2_2:61727681-61727700 | None:intergenic | 25.0% |
!! | TTTTTGTTCTATTGAGAACA+AGG | + | chr2_2:61727742-61727761 | None:intergenic | 25.0% |
!!! | TTTGAAGGGATTATCTTTTT+TGG | + | chr2_2:61727939-61727958 | None:intergenic | 25.0% |
! | AAAAGATAATCCCTTCAAAA+TGG | - | chr2_2:61727940-61727959 | Msa0262700:intron | 25.0% |
!!! | ACAAAAGTGTCACAAAATAT+TGG | - | chr2_2:61728039-61728058 | Msa0262700:intron | 25.0% |
!!! | CAAAAGTGTCACAAAATATT+GGG | - | chr2_2:61728040-61728059 | Msa0262700:intron | 25.0% |
!! | TTCATTTTCATTGAAACTAG+AGG | - | chr2_2:61728126-61728145 | Msa0262700:intron | 25.0% |
!!! | TATTTCTAAAACGACTAACA+CGG | - | chr2_2:61728337-61728356 | Msa0262700:intron | 25.0% |
! | AACAGAATTGATTATGATCA+TGG | + | chr2_2:61728676-61728695 | None:intergenic | 25.0% |
! | AATCAATTCTGTTATTAAGG+AGG | - | chr2_2:61728683-61728702 | Msa0262700:intron | 25.0% |
!! | TGCTGATGGAAAATTTTATA+GGG | + | chr2_2:61728843-61728862 | None:intergenic | 25.0% |
!! | ATGCTGATGGAAAATTTTAT+AGG | + | chr2_2:61728844-61728863 | None:intergenic | 25.0% |
!! | GCTGATGGAAAAATTTTATA+GGG | + | chr2_2:61728874-61728893 | None:intergenic | 25.0% |
!! | TGCTGATGGAAAAATTTTAT+AGG | + | chr2_2:61728875-61728894 | None:intergenic | 25.0% |
!! | CATTTTCCTTAAGCATTTTA+GGG | + | chr2_2:61728906-61728925 | None:intergenic | 25.0% |
!! | ACATTTTCCTTAAGCATTTT+AGG | + | chr2_2:61728907-61728926 | None:intergenic | 25.0% |
!!! | TTTTGACATTTGATTTCAGA+TGG | - | chr2_2:61729020-61729039 | Msa0262700:intron | 25.0% |
!! | TTTGACATTTGATTTCAGAT+GGG | - | chr2_2:61729021-61729040 | Msa0262700:intron | 25.0% |
!! | TAAATTTTACAAAATCGTGG+TGG | + | chr2_2:61729438-61729457 | None:intergenic | 25.0% |
!! | CTCTAAATTTTACAAAATCG+TGG | + | chr2_2:61729441-61729460 | None:intergenic | 25.0% |
!! | TTAGTGAATGTTTTGTACTA+TGG | + | chr2_2:61729483-61729502 | None:intergenic | 25.0% |
! | ATATGTTTCTTAATTAGTCC+AGG | - | chr2_2:61729953-61729972 | Msa0262700:intron | 25.0% |
! | ACCATAGGAATTATTTAACT+TGG | - | chr2_2:61729993-61730012 | Msa0262700:intron | 25.0% |
! | TTAAAAAGTGACACTTAGAA+AGG | + | chr2_2:61730138-61730157 | None:intergenic | 25.0% |
! | CTCTCCACAATAAATAATTA+AGG | - | chr2_2:61730267-61730286 | Msa0262700:CDS | 25.0% |
! | TTTGAAAGTGACAGTTAAAT+AGG | - | chr2_2:61730328-61730347 | Msa0262700:CDS | 25.0% |
! | AACAGAAAACCCATTTTCTT+GGG | + | chr2_2:61725113-61725132 | None:intergenic | 30.0% |
! | TAACAGAAAACCCATTTTCT+TGG | + | chr2_2:61725114-61725133 | None:intergenic | 30.0% |
AGAAGAAGTAAAAACAGAGT+CGG | + | chr2_2:61725137-61725156 | None:intergenic | 30.0% | |
! | TTTTCTCTCATTACTAGTAC+TGG | + | chr2_2:61725225-61725244 | None:intergenic | 30.0% |
TTGAATTGTGGATCTATGAA+GGG | + | chr2_2:61725326-61725345 | None:intergenic | 30.0% | |
ATTGAATTGTGGATCTATGA+AGG | + | chr2_2:61725327-61725346 | None:intergenic | 30.0% | |
! | TATTTCTGATACTGAGTATC+AGG | + | chr2_2:61725368-61725387 | None:intergenic | 30.0% |
CTCAGTATCAGAAATATAGA+TGG | - | chr2_2:61725372-61725391 | Msa0262700:intron | 30.0% | |
AACAGAAGCTATGATAGAAA+TGG | + | chr2_2:61725440-61725459 | None:intergenic | 30.0% | |
TGTTAGATTTAGTGTAGGTT+TGG | - | chr2_2:61725456-61725475 | Msa0262700:three_prime_UTR | 30.0% | |
GAGTAAATCTATCAGAATCA+CGG | + | chr2_2:61725527-61725546 | None:intergenic | 30.0% | |
!! | TGGATTTTCTAGCAAAGTAT+AGG | - | chr2_2:61725674-61725693 | Msa0262700:CDS | 30.0% |
!! | GGATTTTCTAGCAAAGTATA+GGG | - | chr2_2:61725675-61725694 | Msa0262700:CDS | 30.0% |
!! | GATTTTCTAGCAAAGTATAG+GGG | - | chr2_2:61725676-61725695 | Msa0262700:CDS | 30.0% |
TAGCATGTATGATTCATTCT+TGG | - | chr2_2:61725752-61725771 | Msa0262700:CDS | 30.0% | |
AGCATGTATGATTCATTCTT+GGG | - | chr2_2:61725753-61725772 | Msa0262700:CDS | 30.0% | |
!!! | AGAAGGAATACCTTGTTTTT+GGG | + | chr2_2:61725780-61725799 | None:intergenic | 30.0% |
TATCTCCACAATAACATTTC+AGG | - | chr2_2:61725813-61725832 | Msa0262700:CDS | 30.0% | |
ACTAACCTGAAATGTTATTG+TGG | + | chr2_2:61725821-61725840 | None:intergenic | 30.0% | |
! | AAATCTACGATCCATTTTGT+AGG | - | chr2_2:61726048-61726067 | Msa0262700:intron | 30.0% |
GTGAGCAATAAAGTATGAAA+CGG | - | chr2_2:61726145-61726164 | Msa0262700:intron | 30.0% | |
TGAGCAATAAAGTATGAAAC+GGG | - | chr2_2:61726146-61726165 | Msa0262700:intron | 30.0% | |
! | AATAAAGTATGAAACGGGTT+TGG | - | chr2_2:61726151-61726170 | Msa0262700:intron | 30.0% |
AAAAACTATTACCATGGCAA+TGG | + | chr2_2:61726254-61726273 | None:intergenic | 30.0% | |
! | TTTCTTTTCCTGATCAAAAC+TGG | - | chr2_2:61726453-61726472 | Msa0262700:CDS | 30.0% |
!! | TAAATATGCCAGTTTTGATC+AGG | + | chr2_2:61726464-61726483 | None:intergenic | 30.0% |
! | GAAACACGTGTTTTCTTTTT+CGG | + | chr2_2:61726850-61726869 | None:intergenic | 30.0% |
ATTCACCCATTCACAAAATT+GGG | - | chr2_2:61727020-61727039 | Msa0262700:CDS | 30.0% | |
!! | AATTTCATTTTTGTGCCCTT+GGG | + | chr2_2:61727049-61727068 | None:intergenic | 30.0% |
!! | AAATTTCATTTTTGTGCCCT+TGG | + | chr2_2:61727050-61727069 | None:intergenic | 30.0% |
TCCTATGCAAAGAAAGAAAA+AGG | + | chr2_2:61727362-61727381 | None:intergenic | 30.0% | |
CTTGATTGATGCTTATATCA+AGG | + | chr2_2:61727682-61727701 | None:intergenic | 30.0% | |
!! | GTAGTTTACTGACTTTATGT+AGG | + | chr2_2:61728021-61728040 | None:intergenic | 30.0% |
!! | AATGAAAATGAAAAGTGCCA+TGG | + | chr2_2:61728118-61728137 | None:intergenic | 30.0% |
AGAAAATAGACATCACTGAA+AGG | - | chr2_2:61728150-61728169 | Msa0262700:intron | 30.0% | |
!!! | ATGTATTGGTTTTCAACACA+TGG | - | chr2_2:61728599-61728618 | Msa0262700:intron | 30.0% |
GGTGTTAAATATAGATCCTA+CGG | + | chr2_2:61728655-61728674 | None:intergenic | 30.0% | |
TTTAGTCCCTAAAATGCTTA+AGG | - | chr2_2:61728897-61728916 | Msa0262700:intron | 30.0% | |
ATGCTTAAGGAAAATGTCAT+AGG | - | chr2_2:61728910-61728929 | Msa0262700:intron | 30.0% | |
TGCTTAAGGAAAATGTCATA+GGG | - | chr2_2:61728911-61728930 | Msa0262700:intron | 30.0% | |
AGATGGGATTATATTCAAGA+GGG | - | chr2_2:61729037-61729056 | Msa0262700:intron | 30.0% | |
CTTTGTAGAAAGCAATGAAA+CGG | + | chr2_2:61729087-61729106 | None:intergenic | 30.0% | |
AATTCCTAAAAAGAAGACCT+TGG | + | chr2_2:61729161-61729180 | None:intergenic | 30.0% | |
TTCCTATGGTAGAAAACAAT+GGG | + | chr2_2:61729983-61730002 | None:intergenic | 30.0% | |
ATTCCTATGGTAGAAAACAA+TGG | + | chr2_2:61729984-61730003 | None:intergenic | 30.0% | |
GCCAAGTTAAATAATTCCTA+TGG | + | chr2_2:61729997-61730016 | None:intergenic | 30.0% | |
!!! | CATATTATTTTGGCACTCTT+TGG | - | chr2_2:61730087-61730106 | Msa0262700:intron | 30.0% |
GTAACATTTATTGAGTGTCT+TGG | + | chr2_2:61730174-61730193 | None:intergenic | 30.0% | |
TCCAAAAGTGACACTTAAAA+AGG | - | chr2_2:61730364-61730383 | Msa0262700:CDS | 30.0% | |
!!! | TCCTTTTTAAGTGTCACTTT+TGG | + | chr2_2:61730368-61730387 | None:intergenic | 30.0% |
AAGTGACACTTAAAAAGGAA+CGG | - | chr2_2:61730369-61730388 | Msa0262700:CDS | 30.0% | |
! | CTCATTACTAGTACTGGAAA+CGG | + | chr2_2:61725219-61725238 | None:intergenic | 35.0% |
CTTGGTATAGAACAAGTGAA+AGG | + | chr2_2:61725401-61725420 | None:intergenic | 35.0% | |
CTTTCACTTGTTCTATACCA+AGG | - | chr2_2:61725399-61725418 | Msa0262700:intron | 35.0% | |
AGCTATGATAGAAATGGAGA+AGG | + | chr2_2:61725434-61725453 | None:intergenic | 35.0% | |
GCTTCTGTTAGATTTAGTGT+AGG | - | chr2_2:61725451-61725470 | Msa0262700:three_prime_UTR | 35.0% | |
ACTTTGAGTCACCTTAATTC+TGG | + | chr2_2:61725498-61725517 | None:intergenic | 35.0% | |
GAATTAAGGTGACTCAAAGT+AGG | - | chr2_2:61725498-61725517 | Msa0262700:three_prime_UTR | 35.0% | |
TACATGCTAGTGAATTGAAC+TGG | + | chr2_2:61725741-61725760 | None:intergenic | 35.0% | |
!!! | GAGAAGGAATACCTTGTTTT+TGG | + | chr2_2:61725781-61725800 | None:intergenic | 35.0% |
CAATTAGGTGAAAGACAGAA+AGG | + | chr2_2:61725972-61725991 | None:intergenic | 35.0% | |
CTTTCTGTCTTTCACCTAAT+TGG | - | chr2_2:61725970-61725989 | Msa0262700:intron | 35.0% | |
! | ATCCATTTTGTAGGAACTAG+CGG | - | chr2_2:61726057-61726076 | Msa0262700:intron | 35.0% |
ACTATCATTTACCATTGCCA+TGG | - | chr2_2:61726240-61726259 | Msa0262700:intron | 35.0% | |
ATTGTACTTTCCCTCTTCTT+TGG | - | chr2_2:61726417-61726436 | Msa0262700:CDS | 35.0% | |
AACACGTGTTTCTCAGAATA+TGG | - | chr2_2:61726858-61726877 | Msa0262700:intron | 35.0% | |
AACACCAAATATAAGACGGA+TGG | + | chr2_2:61726900-61726919 | None:intergenic | 35.0% | |
CATTCACCCATTCACAAAAT+TGG | - | chr2_2:61727019-61727038 | Msa0262700:CDS | 35.0% | |
!! | ATTTCATTTTTGTGCCCTTG+GGG | + | chr2_2:61727048-61727067 | None:intergenic | 35.0% |
GAATAGAGCTTAATCGCTTA+AGG | + | chr2_2:61727293-61727312 | None:intergenic | 35.0% | |
TAAGCGATTAAGCTCTATTC+CGG | - | chr2_2:61727293-61727312 | Msa0262700:intron | 35.0% | |
! | GCCTTTTTCTTTCTTTGCAT+AGG | - | chr2_2:61727358-61727377 | Msa0262700:intron | 35.0% |
!! | GGGAAAAGGTATTGACAATT+TGG | + | chr2_2:61727413-61727432 | None:intergenic | 35.0% |
ACAGCAAATGCAAGAGATTA+AGG | + | chr2_2:61727901-61727920 | None:intergenic | 35.0% | |
! | CCTTCTTTTATCACACAATG+TGG | + | chr2_2:61728066-61728085 | None:intergenic | 35.0% |
CCACATTGTGTGATAAAAGA+AGG | - | chr2_2:61728063-61728082 | Msa0262700:intron | 35.0% | |
TCTCAAGTAGTGTAGTACTT+TGG | - | chr2_2:61728190-61728209 | Msa0262700:intron | 35.0% | |
ATACACAACATTGTTGACAC+CGG | + | chr2_2:61728384-61728403 | None:intergenic | 35.0% | |
GTGTGCGGAATAGAAATAAT+TGG | + | chr2_2:61728492-61728511 | None:intergenic | 35.0% | |
AAGTTGGACTCAATAAAGAG+TGG | - | chr2_2:61728556-61728575 | Msa0262700:intron | 35.0% | |
! | CAATAAAGAGTGGTAATGCA+TGG | - | chr2_2:61728566-61728585 | Msa0262700:intron | 35.0% |
ATAGGGACTAAAAATGCTGA+TGG | + | chr2_2:61728857-61728876 | None:intergenic | 35.0% | |
TTAGGGACTAAAAATGCTGA+TGG | + | chr2_2:61728889-61728908 | None:intergenic | 35.0% | |
CAGATGGGATTATATTCAAG+AGG | - | chr2_2:61729036-61729055 | Msa0262700:intron | 35.0% | |
CGTTTCATTGCTTTCTACAA+AGG | - | chr2_2:61729085-61729104 | Msa0262700:intron | 35.0% | |
TCTACAAAGGTTTGACAACT+TGG | - | chr2_2:61729098-61729117 | Msa0262700:intron | 35.0% | |
CTACAAAGGTTTGACAACTT+GGG | - | chr2_2:61729099-61729118 | Msa0262700:intron | 35.0% | |
! | CAAACCAAGGTCTTCTTTTT+AGG | - | chr2_2:61729154-61729173 | Msa0262700:intron | 35.0% |
ACTTGCACAAAGTATGTGTA+AGG | - | chr2_2:61729350-61729369 | Msa0262700:intron | 35.0% | |
! | GTGAATGTTTTGTACTATGG+TGG | + | chr2_2:61729480-61729499 | None:intergenic | 35.0% |
AGAGAAACACAACCATTCTT+TGG | - | chr2_2:61729676-61729695 | Msa0262700:intron | 35.0% | |
GTCACATCTAGAAAATACAC+TGG | + | chr2_2:61729772-61729791 | None:intergenic | 35.0% | |
ATAACACTACTATACCCTTC+TGG | + | chr2_2:61729826-61729845 | None:intergenic | 35.0% | |
AGAAGAACATTCCAAGTATC+AGG | + | chr2_2:61729886-61729905 | None:intergenic | 35.0% | |
CTTTGGTTGAAGTAGTGAAT+TGG | - | chr2_2:61729918-61729937 | Msa0262700:intron | 35.0% | |
TGAAGTAGTGAATTGGAAAG+TGG | - | chr2_2:61729925-61729944 | Msa0262700:intron | 35.0% | |
!! | TAGAAAACAATGGGTTTTCC+TGG | + | chr2_2:61729974-61729993 | None:intergenic | 35.0% |
! | AACCCATTGTTTTCTACCAT+AGG | - | chr2_2:61729978-61729997 | Msa0262700:intron | 35.0% |
AAGTGACACTTAGAAAGGAA+CGG | + | chr2_2:61730133-61730152 | None:intergenic | 35.0% | |
ATCACCACGTTATATTCCAA+AGG | + | chr2_2:61730423-61730442 | None:intergenic | 35.0% | |
! | TTTGGAATATAACGTGGTGA+TGG | - | chr2_2:61730422-61730441 | Msa0262700:five_prime_UTR | 35.0% |
!! | GACAACTTTTTCTGCACTCT+TGG | - | chr2_2:61725058-61725077 | Msa0262700:three_prime_UTR | 40.0% |
ATCCTCTCTGTTGAAGGAAA+AGG | + | chr2_2:61725085-61725104 | None:intergenic | 40.0% | |
AGGATCGAAACCCAAGAAAA+TGG | - | chr2_2:61725100-61725119 | Msa0262700:three_prime_UTR | 40.0% | |
GGATCGAAACCCAAGAAAAT+GGG | - | chr2_2:61725101-61725120 | Msa0262700:three_prime_UTR | 40.0% | |
AGTAATGAGAGAAAACTCGC+TGG | - | chr2_2:61725230-61725249 | Msa0262700:intron | 40.0% | |
! | TAACTGGTTTCGTGGCAAAT+GGG | - | chr2_2:61725259-61725278 | Msa0262700:intron | 40.0% |
GATCATAGAGAGGATACGAA+GGG | + | chr2_2:61725292-61725311 | None:intergenic | 40.0% | |
CAAGAAGAAGGATCATAGAG+AGG | + | chr2_2:61725302-61725321 | None:intergenic | 40.0% | |
TCTATGAAGGGACAAGAAGA+AGG | + | chr2_2:61725314-61725333 | None:intergenic | 40.0% | |
GGAGAAGGAGATATATACCT+TGG | + | chr2_2:61725419-61725438 | None:intergenic | 40.0% | |
GAGTGAATTCGCCAGAATTA+AGG | - | chr2_2:61725484-61725503 | Msa0262700:three_prime_UTR | 40.0% | |
ATTCTTGGGTCCCAAAAACA+AGG | - | chr2_2:61725767-61725786 | Msa0262700:CDS | 40.0% | |
!! | GATAGCACTTTGCTTTGAGA+AGG | + | chr2_2:61725797-61725816 | None:intergenic | 40.0% |
CAAAGAACACATCACTTGCA+TGG | + | chr2_2:61725949-61725968 | None:intergenic | 40.0% | |
TCCATGTTGGTGTGAAACAA+TGG | - | chr2_2:61726119-61726138 | Msa0262700:intron | 40.0% | |
TCCATTGTTTCACACCAACA+TGG | + | chr2_2:61726123-61726142 | None:intergenic | 40.0% | |
! | AAAGTATGAAACGGGTTTGG+TGG | - | chr2_2:61726154-61726173 | Msa0262700:intron | 40.0% |
TTAAAAATGTCCCCGGCAAA+AGG | + | chr2_2:61726188-61726207 | None:intergenic | 40.0% | |
TGTCTACGATCCAAAGAAGA+GGG | + | chr2_2:61726430-61726449 | None:intergenic | 40.0% | |
ATGTCTACGATCCAAAGAAG+AGG | + | chr2_2:61726431-61726450 | None:intergenic | 40.0% | |
!!! | GTTTTCTTTTTCGGTCTAGC+TGG | + | chr2_2:61726841-61726860 | None:intergenic | 40.0% |
TGCTCCATCCGTCTTATATT+TGG | - | chr2_2:61726893-61726912 | Msa0262700:CDS | 40.0% | |
! | GGGTACCCAATTTTGTGAAT+GGG | + | chr2_2:61727028-61727047 | None:intergenic | 40.0% |
ACGTGCAAAGAAGAAAAGGT+TGG | + | chr2_2:61727561-61727580 | None:intergenic | 40.0% | |
! | GTCATGTGGTCCATTTTGAA+GGG | + | chr2_2:61727953-61727972 | None:intergenic | 40.0% |
! | TGTCATGTGGTCCATTTTGA+AGG | + | chr2_2:61727954-61727973 | None:intergenic | 40.0% |
AGGAAAAGTCATGAAAGCAG+AGG | + | chr2_2:61728001-61728020 | None:intergenic | 40.0% | |
ACACGGTTGATTGTGATTTG+TGG | - | chr2_2:61728354-61728373 | Msa0262700:intron | 40.0% | |
TCTATTCCGCACACCATATT+TGG | - | chr2_2:61728498-61728517 | Msa0262700:intron | 40.0% | |
ATGGAGAGGAATGGATGTAT+TGG | - | chr2_2:61728585-61728604 | Msa0262700:intron | 40.0% | |
! | TGGTTTTCAACACATGGCAT+TGG | - | chr2_2:61728605-61728624 | Msa0262700:intron | 40.0% |
!! | TTTTCAACACATGGCATTGG+TGG | - | chr2_2:61728608-61728627 | Msa0262700:intron | 40.0% |
TGGGATTATATTCAAGAGGG+TGG | - | chr2_2:61729040-61729059 | Msa0262700:intron | 40.0% | |
TTATATTCAAGAGGGTGGCA+AGG | - | chr2_2:61729045-61729064 | Msa0262700:intron | 40.0% | |
! | TTTGACAACTTGGGCTAGAT+GGG | - | chr2_2:61729108-61729127 | Msa0262700:intron | 40.0% |
TGTAAATCCAGCTCAAACCA+AGG | - | chr2_2:61729141-61729160 | Msa0262700:intron | 40.0% | |
ACAACTTACTCGTAATGCAC+AGG | + | chr2_2:61729187-61729206 | None:intergenic | 40.0% | |
!! | ACACATAGATTTTGGCATGC+TGG | + | chr2_2:61729414-61729433 | None:intergenic | 40.0% |
GGTAAATTAGGGGAAGAGAT+TGG | - | chr2_2:61729629-61729648 | Msa0262700:intron | 40.0% | |
! | TCTCTCATGCATGATTTTGC+TGG | + | chr2_2:61729661-61729680 | None:intergenic | 40.0% |
GGGTACTTCAAACCAAAGAA+TGG | + | chr2_2:61729691-61729710 | None:intergenic | 40.0% | |
AGAAAAGATGCACATCCAGA+AGG | - | chr2_2:61729808-61729827 | Msa0262700:CDS | 40.0% | |
GAAAAGATGCACATCCAGAA+GGG | - | chr2_2:61729809-61729828 | Msa0262700:CDS | 40.0% | |
TGCCAACAGATTGTAGTCAT+TGG | - | chr2_2:61729845-61729864 | Msa0262700:intron | 40.0% | |
CACCAATGACTACAATCTGT+TGG | + | chr2_2:61729850-61729869 | None:intergenic | 40.0% | |
TGACACTTAAAAAGGAACGG+AGG | - | chr2_2:61730372-61730391 | Msa0262700:CDS | 40.0% | |
CAATGCAAAGAACCTTCCTT+TGG | - | chr2_2:61730404-61730423 | Msa0262700:five_prime_UTR | 40.0% | |
CCACGTTATATTCCAAAGGA+AGG | + | chr2_2:61730419-61730438 | None:intergenic | 40.0% | |
!! | CCTTCCTTTGGAATATAACG+TGG | - | chr2_2:61730416-61730435 | Msa0262700:five_prime_UTR | 40.0% |
! | GTCCTTTTCCTTCAACAGAG+AGG | - | chr2_2:61725080-61725099 | Msa0262700:three_prime_UTR | 45.0% |
GTTTCGATCCTCTCTGTTGA+AGG | + | chr2_2:61725091-61725110 | None:intergenic | 45.0% | |
! | GGTAGTTGTTGCTGTTGTGT+TGG | + | chr2_2:61725198-61725217 | None:intergenic | 45.0% |
AACTCGCTGGAAGATGTAAC+TGG | - | chr2_2:61725243-61725262 | Msa0262700:intron | 45.0% | |
! | GGAAGATGTAACTGGTTTCG+TGG | - | chr2_2:61725251-61725270 | Msa0262700:intron | 45.0% |
! | GTAACTGGTTTCGTGGCAAA+TGG | - | chr2_2:61725258-61725277 | Msa0262700:intron | 45.0% |
GGATCATAGAGAGGATACGA+AGG | + | chr2_2:61725293-61725312 | None:intergenic | 45.0% | |
ACATGGGTTCACTTCACACA+AGG | + | chr2_2:61726015-61726034 | None:intergenic | 45.0% | |
!! | AACATGCTTAAAGAGTGCCC+CGG | + | chr2_2:61726540-61726559 | None:intergenic | 45.0% |
AAATGTTAACTAGTGCCCCG+AGG | + | chr2_2:61726666-61726685 | None:intergenic | 45.0% | |
!! | GGGGTACCCAATTTTGTGAA+TGG | + | chr2_2:61727029-61727048 | None:intergenic | 45.0% |
TCACAAAATTGGGTACCCCA+AGG | - | chr2_2:61727030-61727049 | Msa0262700:intron | 45.0% | |
CACAAAATTGGGTACCCCAA+GGG | - | chr2_2:61727031-61727050 | Msa0262700:intron | 45.0% | |
CAAAATGGACCACATGACAC+TGG | - | chr2_2:61727955-61727974 | Msa0262700:intron | 45.0% | |
! | CAGAGGAGTGCATCTGAATT+AGG | + | chr2_2:61727984-61728003 | None:intergenic | 45.0% |
TCACTGAAAGGAGTTGAGTG+AGG | - | chr2_2:61728162-61728181 | Msa0262700:intron | 45.0% | |
! | GATTGTGATTTGTGGTGTGC+CGG | - | chr2_2:61728362-61728381 | Msa0262700:intron | 45.0% |
GGTCTACCAAATATGGTGTG+CGG | + | chr2_2:61728507-61728526 | None:intergenic | 45.0% | |
CGGTCAAGGTCTACCAAATA+TGG | + | chr2_2:61728514-61728533 | None:intergenic | 45.0% | |
ACCTTGACCGTGAGAACATT+GGG | - | chr2_2:61728524-61728543 | Msa0262700:intron | 45.0% | |
!! | CATTGGGCGTGTTCTAAAGT+TGG | - | chr2_2:61728540-61728559 | Msa0262700:intron | 45.0% |
! | AAGAGTGGTAATGCATGGAG+AGG | - | chr2_2:61728571-61728590 | Msa0262700:intron | 45.0% |
! | TGGTAATGCATGGAGAGGAA+TGG | - | chr2_2:61728576-61728595 | Msa0262700:intron | 45.0% |
! | GTTTGACAACTTGGGCTAGA+TGG | - | chr2_2:61729107-61729126 | Msa0262700:intron | 45.0% |
! | AAGAAGACCTTGGTTTGAGC+TGG | + | chr2_2:61729151-61729170 | None:intergenic | 45.0% |
! | GTGGTGGCACACATAGATTT+TGG | + | chr2_2:61729422-61729441 | None:intergenic | 45.0% |
!! | TTTGGTTTGAAGTACCCAGC+AGG | - | chr2_2:61729694-61729713 | Msa0262700:CDS | 45.0% |
TTCACTATCACCCAAGCCAT+TGG | + | chr2_2:61729724-61729743 | None:intergenic | 45.0% | |
! | TGTAGTCATTGGTGTCTTCC+AGG | - | chr2_2:61729856-61729875 | Msa0262700:intron | 45.0% |
TTCCAGGACTTCCTGATACT+TGG | - | chr2_2:61729872-61729891 | Msa0262700:intron | 45.0% | |
TTCCAAGTATCAGGAAGTCC+TGG | + | chr2_2:61729877-61729896 | None:intergenic | 45.0% | |
CTTCTTCATGCAGCTCTCTT+TGG | - | chr2_2:61729901-61729920 | Msa0262700:intron | 45.0% | |
GACACTTAGAAAGGAACGGA+TGG | + | chr2_2:61730129-61730148 | None:intergenic | 45.0% | |
!! | TATTTAAAAAATACATTTAT+TGG | - | chr2_2:61726361-61726380 | Msa0262700:CDS | 5.0% |
!! | ATTTAAAAAATACATTTATT+GGG | - | chr2_2:61726362-61726381 | Msa0262700:CDS | 5.0% |
!!! | ATATTTAATTTATCTTTTTT+TGG | - | chr2_2:61726477-61726496 | Msa0262700:intron | 5.0% |
!!! | TATTAATATTATTTTCAAAA+AGG | + | chr2_2:61727855-61727874 | None:intergenic | 5.0% |
CGCCGCTAGTTCCTACAAAA+TGG | + | chr2_2:61726062-61726081 | None:intergenic | 50.0% | |
! | GGAACTAGCGGCGAATTTTG+TGG | - | chr2_2:61726069-61726088 | Msa0262700:intron | 50.0% |
!! | GTATGAAACGGGTTTGGTGG+AGG | - | chr2_2:61726157-61726176 | Msa0262700:intron | 50.0% |
! | GTGGAGGCTTTTCCTTTTGC+CGG | - | chr2_2:61726173-61726192 | Msa0262700:intron | 50.0% |
! | TGGAGGCTTTTCCTTTTGCC+GGG | - | chr2_2:61726174-61726193 | Msa0262700:intron | 50.0% |
!! | GGATTTGTTAACGAGTGCCC+CGG | - | chr2_2:61726518-61726537 | Msa0262700:intron | 50.0% |
!! | GATTTGTTAACGAGTGCCCC+GGG | - | chr2_2:61726519-61726538 | Msa0262700:intron | 50.0% |
! | ATTTGTTAACGAGTGCCCCG+GGG | - | chr2_2:61726520-61726539 | Msa0262700:intron | 50.0% |
!! | ACATGCTTAAAGAGTGCCCC+GGG | + | chr2_2:61726539-61726558 | None:intergenic | 50.0% |
ATGGTCCTTAACGAGTGCCT+CGG | - | chr2_2:61726646-61726665 | Msa0262700:intron | 50.0% | |
GGGGACGTGCAAAGAAGAAA+AGG | + | chr2_2:61727565-61727584 | None:intergenic | 50.0% | |
AATGGACCACATGACACTGG+TGG | - | chr2_2:61727958-61727977 | Msa0262700:intron | 50.0% | |
ATTAGGCCACCAGTGTCATG+TGG | + | chr2_2:61727967-61727986 | None:intergenic | 50.0% | |
GACCTTGACCGTGAGAACAT+TGG | - | chr2_2:61728523-61728542 | Msa0262700:intron | 50.0% | |
GAACACGCCCAATGTTCTCA+CGG | + | chr2_2:61728534-61728553 | None:intergenic | 50.0% | |
CGGTTGTGCATTTCCAGTGT+GGG | + | chr2_2:61728635-61728654 | None:intergenic | 50.0% | |
ACGGTTGTGCATTTCCAGTG+TGG | + | chr2_2:61728636-61728655 | None:intergenic | 50.0% | |
CACTGGAAATGCACAACCGT+AGG | - | chr2_2:61728636-61728655 | Msa0262700:intron | 50.0% | |
! | AAGCCATTGGTGTTCCTGCT+GGG | + | chr2_2:61729711-61729730 | None:intergenic | 50.0% |
AGCAGGAACACCAATGGCTT+GGG | - | chr2_2:61729711-61729730 | Msa0262700:CDS | 50.0% | |
! | GGAGGCTTTTCCTTTTGCCG+GGG | - | chr2_2:61726175-61726194 | Msa0262700:intron | 55.0% |
!! | CATGCTTAAAGAGTGCCCCG+GGG | + | chr2_2:61726538-61726557 | None:intergenic | 55.0% |
TGGTCCTTAACGAGTGCCTC+GGG | - | chr2_2:61726647-61726666 | Msa0262700:intron | 55.0% | |
GCCCAATGTTCTCACGGTCA+AGG | + | chr2_2:61728528-61728547 | None:intergenic | 55.0% | |
GTACCCAGCAGGAACACCAA+TGG | - | chr2_2:61729705-61729724 | Msa0262700:CDS | 55.0% | |
! | CAAGCCATTGGTGTTCCTGC+TGG | + | chr2_2:61729712-61729731 | None:intergenic | 55.0% |
CAGCAGGAACACCAATGGCT+TGG | - | chr2_2:61729710-61729729 | Msa0262700:CDS | 55.0% | |
GGTCCTTAACGAGTGCCTCG+GGG | - | chr2_2:61726648-61726667 | Msa0262700:intron | 60.0% | |
!! | TGGCATTGGTGGACCCACAC+TGG | - | chr2_2:61728619-61728638 | Msa0262700:intron | 60.0% |
! | GTGCCCCGAGGCACTCGTTA+AGG | + | chr2_2:61726654-61726673 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 61725025 | 61730496 | 61725025 | ID=Msa0262700;Name=Msa0262700 |
chr2_2 | mRNA | 61725025 | 61730496 | 61725025 | ID=Msa0262700-mRNA-1;Parent=Msa0262700;Name=Msa0262700-mRNA-1;_AED=0.15;_eAED=0.15;_QI=94|1|1|1|0.8|0.66|6|319|365 |
chr2_2 | exon | 61725025 | 61725193 | 61725025 | ID=Msa0262700-mRNA-1:exon:19026;Parent=Msa0262700-mRNA-1 |
chr2_2 | exon | 61725444 | 61725882 | 61725444 | ID=Msa0262700-mRNA-1:exon:19025;Parent=Msa0262700-mRNA-1 |
chr2_2 | exon | 61726324 | 61726482 | 61726324 | ID=Msa0262700-mRNA-1:exon:19024;Parent=Msa0262700-mRNA-1 |
chr2_2 | exon | 61726868 | 61727043 | 61726868 | ID=Msa0262700-mRNA-1:exon:19023;Parent=Msa0262700-mRNA-1 |
chr2_2 | exon | 61729687 | 61729858 | 61729687 | ID=Msa0262700-mRNA-1:exon:19022;Parent=Msa0262700-mRNA-1 |
chr2_2 | exon | 61730101 | 61730496 | 61730101 | ID=Msa0262700-mRNA-1:exon:19021;Parent=Msa0262700-mRNA-1 |
chr2_2 | five_prime_UTR | 61730403 | 61730496 | 61730403 | ID=Msa0262700-mRNA-1:five_prime_utr;Parent=Msa0262700-mRNA-1 |
chr2_2 | CDS | 61730101 | 61730402 | 61730101 | ID=Msa0262700-mRNA-1:cds;Parent=Msa0262700-mRNA-1 |
chr2_2 | CDS | 61729687 | 61729858 | 61729687 | ID=Msa0262700-mRNA-1:cds;Parent=Msa0262700-mRNA-1 |
chr2_2 | CDS | 61726868 | 61727043 | 61726868 | ID=Msa0262700-mRNA-1:cds;Parent=Msa0262700-mRNA-1 |
chr2_2 | CDS | 61726324 | 61726482 | 61726324 | ID=Msa0262700-mRNA-1:cds;Parent=Msa0262700-mRNA-1 |
chr2_2 | CDS | 61725594 | 61725882 | 61725594 | ID=Msa0262700-mRNA-1:cds;Parent=Msa0262700-mRNA-1 |
chr2_2 | three_prime_UTR | 61725444 | 61725593 | 61725444 | ID=Msa0262700-mRNA-1:three_prime_utr;Parent=Msa0262700-mRNA-1 |
chr2_2 | three_prime_UTR | 61725025 | 61725193 | 61725025 | ID=Msa0262700-mRNA-1:three_prime_utr;Parent=Msa0262700-mRNA-1 |
Gene Sequence |
Protein sequence |