AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0623990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0623990 MtrunA17_Chr4g0019561 94.592 1239 27 3 1 1239 1 1199 0.0 2388
Msa0623990 MtrunA17_Chr8g0376011 36.068 707 367 16 559 1234 145 797 1.01e-121 396
Msa0623990 MtrunA17_Chr5g0447621 37.665 454 268 9 788 1227 92 544 7.22e-88 296
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0623990 AT3G63500.2 45.511 1136 520 26 156 1239 74 1162 0.0 762
Msa0623990 AT3G63500.3 45.511 1136 520 26 156 1239 74 1162 0.0 762
Msa0623990 AT3G63500.1 51.815 799 349 14 451 1239 115 887 0.0 709
Msa0623990 AT1G14740.1 41.138 457 240 6 784 1238 304 733 3.49e-107 355
Msa0623990 AT5G48160.2 35.345 464 280 9 782 1227 90 551 1.33e-87 296
Msa0623990 AT5G48160.1 35.345 464 280 9 782 1227 90 551 1.33e-87 296
Msa0623990 AT3G07780.3 37.089 426 254 7 788 1202 95 517 2.38e-83 284
Msa0623990 AT3G07780.1 37.089 426 254 7 788 1202 95 517 2.38e-83 284
Msa0623990 AT3G07780.2 37.089 426 254 7 788 1202 106 528 5.32e-83 283

Find 348 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGTTGTTCTTGTCCTTTC+TGG 0.088608 4_3:+1839317 None:intergenic
TCCACCAAGGTAAAGGTTTC+TGG 0.172092 4_3:+1836407 None:intergenic
AGCACGCGATTGAAACATTT+TGG 0.191298 4_3:+1837019 None:intergenic
GTGATGGACTCTACAGATTT+TGG 0.226571 4_3:+1836574 None:intergenic
GTTCGTTGTCAGGGCTAATT+TGG 0.236529 4_3:+1837283 None:intergenic
CGGAGTCTCCAAGGGTGTTT+AGG 0.238971 4_3:-1840887 Msa0623990:CDS
CAAAGATCTGTTATCCAAAA+TGG 0.254586 4_3:-1836790 Msa0623990:CDS
TGGCAGTCGCCCCTTGTTCC+AGG 0.261967 4_3:-1839695 Msa0623990:CDS
CTTCCCGATGCTTCATCTTT+CGG 0.262575 4_3:+1840672 None:intergenic
GAGGGAGTGGTGGTGGTAGT+AGG 0.280438 4_3:-1841013 Msa0623990:CDS
AGCCAGGCAGCTTCCTGGCT+GGG 0.285425 4_3:+1837215 None:intergenic
CTCCGAATCCTTCGACCAAC+TGG 0.293331 4_3:+1840935 None:intergenic
CAGCCAGGCAGCTTCCTGGC+TGG 0.294368 4_3:+1837214 None:intergenic
GATTCTGAGGTAAAAGTTAC+AGG 0.301592 4_3:-1840513 Msa0623990:CDS
CACTAGAACCTACAAATTTC+AGG 0.308221 4_3:+1836686 None:intergenic
CACATATGAAAGAGGGTATT+CGG 0.310970 4_3:-1839189 Msa0623990:CDS
GTTGGATCATCTTGAGTCTT+AGG 0.311527 4_3:+1840471 None:intergenic
GTTTGTCCTCAGAGGTTTGC+TGG 0.320674 4_3:+1840643 None:intergenic
TCAGTTTCACGGACCGGTTC+AGG 0.321416 4_3:+1840708 None:intergenic
TATCACCTAGGTGAAGATAA+TGG 0.322066 4_3:+1839020 None:intergenic
AGAGGGAACTTCTTTCTGTT+TGG 0.324115 4_3:+1839636 None:intergenic
GCAACAGATATTTCATTAGT+TGG 0.325903 4_3:+1840453 None:intergenic
TCTCCCTCTTATATCCTTGC+TGG 0.336748 4_3:+1838568 None:intergenic
CGTGCTTGACTGGGAGATCC+AGG 0.337027 4_3:+1839871 None:intergenic
GAGGGAACTTCTTTCTGTTT+GGG 0.337260 4_3:+1839637 None:intergenic
ACGGAGAAGGGAACAGATAA+GGG 0.339656 4_3:-1840345 Msa0623990:CDS
GGCCCAGCCAGGAAGCTGCC+TGG 0.339934 4_3:-1837217 Msa0623990:CDS
GGAGGTGTTGATAGGAATAT+TGG 0.343253 4_3:-1841278 Msa0623990:CDS
TGTACTGTCCAGACATTTCA+TGG 0.348534 4_3:+1839215 None:intergenic
TGTCTCATCCTGAAATTTGT+AGG 0.348998 4_3:-1836694 Msa0623990:three_prime_UTR
CGGGAATCTTATATTAGAAA+TGG 0.351580 4_3:-1838764 Msa0623990:CDS
ATTTCAGCCAGGCAGCTTCC+TGG 0.358361 4_3:+1837210 None:intergenic
TGGGATCACCCTGCTGAGAT+AGG 0.361197 4_3:+1839656 None:intergenic
TCGAGTGCAACTGGAAATTC+TGG 0.363085 4_3:-1839065 Msa0623990:CDS
CTTTGAAAGGTCAACATTCT+CGG 0.366410 4_3:-1839537 Msa0623990:CDS
GGGGTGCTGAAAGGAATATT+GGG 0.368834 4_3:-1841256 Msa0623990:CDS
ATCAACAATGTGAAGGATAA+AGG 0.371206 4_3:-1840183 Msa0623990:CDS
GATCACCCTTCTGAGATGTT+TGG 0.372124 4_3:-1838683 Msa0623990:CDS
TTCCAGAGAAGTTCGTTGTC+AGG 0.372250 4_3:+1837273 None:intergenic
CTGAACACTCCGTGCTTGAC+TGG 0.373210 4_3:+1839861 None:intergenic
AATCTTGGAAGGATGCTTGC+AGG 0.374270 4_3:+1837152 None:intergenic
GGAGTCTCCAAGGGTGTTTA+GGG 0.379822 4_3:-1840886 Msa0623990:CDS
GAGGAGCGTGAGGAGGATAA+TGG 0.380869 4_3:-1840303 Msa0623990:CDS
ATTATAAGCAGGAGAATGTA+AGG 0.384351 4_3:-1841487 Msa0623990:CDS
GAGATAGGAATTTGATTCAT+AGG 0.384357 4_3:-1841166 Msa0623990:CDS
TTATCATTCTGGTCAAATCT+TGG 0.385360 4_3:+1837137 None:intergenic
CATAGTACTACTGGAACAAA+AGG 0.387340 4_3:-1838740 Msa0623990:CDS
GATTTGACCAGAATGATAAA+AGG 0.387364 4_3:-1837133 Msa0623990:CDS
TACAGTAGCTCACAACAATA+AGG 0.388055 4_3:+1836658 None:intergenic
GAAGAATTATGAAGAGGTTA+AGG 0.392362 4_3:-1841622 Msa0623990:exon
TTCATCAGTAACATCATTCT+CGG 0.399522 4_3:+1840242 None:intergenic
ATCGGTATAGCCGGGACAGC+CGG 0.401901 4_3:-1841316 Msa0623990:CDS
AGGGAGTGGTGGTGGTAGTA+GGG 0.404632 4_3:-1841012 Msa0623990:CDS
GAGTGGAAGTGGTAGTGAAA+TGG 0.406248 4_3:-1840748 Msa0623990:CDS
CGCATCATGTCTTTCCTCTC+TGG 0.407654 4_3:-1838473 Msa0623990:intron
AATAAATACAACTACAAATC+AGG 0.408015 4_3:+1836632 None:intergenic
GAGGTGTTGATAGGAATATT+GGG 0.412238 4_3:-1841277 Msa0623990:CDS
CCTTGTTCCAGGGATTTGAT+TGG 0.413289 4_3:-1839684 Msa0623990:CDS
CGGTCTCCTACGCAGAGTGT+TGG 0.413528 4_3:-1839418 Msa0623990:CDS
TCGAACACTGTTAGTTGGGT+TGG 0.413804 4_3:-1838830 Msa0623990:CDS
GGTGTGATGTTTGTCTTCAC+TGG 0.414742 4_3:-1838808 Msa0623990:CDS
GTTGCACATTCTTCAAAAGA+TGG 0.416220 4_3:-1840135 Msa0623990:CDS
AAGTTCCTTGTAAAGAGATT+CGG 0.416337 4_3:+1838616 None:intergenic
ATCACCTAGGTGAAGATAAT+GGG 0.420583 4_3:+1839021 None:intergenic
GGTACAGTGGAGGTGTTGAT+AGG 0.428287 4_3:-1841286 Msa0623990:CDS
TAAGTCGCCTTCTGTGTCTA+AGG 0.430099 4_3:-1840847 Msa0623990:CDS
CTCTCCGATCGAAACCCCTT+CGG 0.430389 4_3:+1841107 None:intergenic
AGCTCGAACCCTCTTGTGCT+TGG 0.430742 4_3:+1840051 None:intergenic
CAACATTCTCGGGCTCTAGA+AGG 0.431426 4_3:-1839526 Msa0623990:CDS
ACCCAGTTGGTCGAAGGATT+CGG 0.431801 4_3:-1840937 Msa0623990:CDS
GCCTTCTGTGTCTAAGGATT+CGG 0.432906 4_3:-1840841 Msa0623990:CDS
GAAGTGTCATCGAGTGCAAC+TGG 0.435351 4_3:-1839074 Msa0623990:CDS
CGAACACTGTTAGTTGGGTT+GGG 0.435612 4_3:-1838829 Msa0623990:CDS
AGGTGATGCAGATGTTGTTA+TGG 0.435839 4_3:-1840589 Msa0623990:CDS
TGATGGGTTTGATAGGAGGA+AGG 0.435885 4_3:-1841357 Msa0623990:CDS
GGGTTTGTTGAACCGAAGAT+TGG 0.437251 4_3:+1841707 None:intergenic
AAGCGAGGAGTTGTTGCAAC+AGG 0.437499 4_3:-1840775 Msa0623990:CDS
TCATACTGACTGTGGATTGC+GGG 0.438003 4_3:-1838783 Msa0623990:CDS
CCGGCACAATTCCCAATCTT+CGG 0.438704 4_3:-1841719 Msa0623990:five_prime_UTR
TGGTAGTAGGGTTGAAGAGA+GGG 0.440032 4_3:-1841000 Msa0623990:CDS
TTTGAAGAATGTGCAACATC+AGG 0.440642 4_3:+1840141 None:intergenic
ACGCGTCGAACACTGTTAGT+TGG 0.440772 4_3:-1838835 Msa0623990:CDS
GGGTTGAAGAGAGGGTGGTT+AGG 0.441620 4_3:-1840992 Msa0623990:CDS
TCGAACGGTGGAGGAAGATC+GGG 0.441864 4_3:-1841420 Msa0623990:CDS
TTGGATTGTGATATAATGAT+TGG 0.441901 4_3:+1839773 None:intergenic
CGCGTCGAACACTGTTAGTT+GGG 0.443205 4_3:-1838834 Msa0623990:CDS
TGGATTAGAGAGGGCACATA+TGG 0.448919 4_3:-1836850 Msa0623990:CDS
TTCAGATAAGGCACCTCTGT+TGG 0.449453 4_3:-1837180 Msa0623990:CDS
GAAGGGTTTCGATCGGGATC+GGG 0.449611 4_3:-1841339 Msa0623990:CDS
ATCGAACGGTGGAGGAAGAT+CGG 0.451499 4_3:-1841421 Msa0623990:CDS
GTCAGAGAACTTCGATGAAT+GGG 0.451524 4_3:-1839612 Msa0623990:CDS
AGTAGTAGAGGGAGTGGTGG+TGG 0.452180 4_3:-1841020 Msa0623990:CDS
GATGCTTCATCTTTCGGAGC+AGG 0.452690 4_3:+1840678 None:intergenic
GATGAGAGTAGTAGAGGGAG+TGG 0.453508 4_3:-1841026 Msa0623990:CDS
GAGGGATCGATCGAGGAGGG+AGG 0.455040 4_3:-1841087 Msa0623990:CDS
TCTGCCAGCAAGGATATAAG+AGG 0.456155 4_3:-1838572 Msa0623990:CDS
GAAATCTATTTATTCAGATA+AGG 0.456665 4_3:-1837192 Msa0623990:CDS
AGTAGTGTTCATAAAGACTT+TGG 0.458637 4_3:-1837086 Msa0623990:CDS
TTTGAAAGGTCAACATTCTC+GGG 0.460445 4_3:-1839536 Msa0623990:CDS
AACGGAGAAGGGAACAGATA+AGG 0.460915 4_3:-1840346 Msa0623990:CDS
AGAAGGACGAGTGTTTGAAC+GGG 0.461857 4_3:-1840392 Msa0623990:CDS
GGTTGAGCCTTCAATTGACT+CGG 0.463328 4_3:+1840263 None:intergenic
GGTCTCCTACGCAGAGTGTT+GGG 0.463605 4_3:-1839417 Msa0623990:CDS
GGAAGGGTTTCGATCGGGAT+CGG 0.465188 4_3:-1841340 Msa0623990:CDS
GTTTCGATCGGGATCGGGAT+CGG 0.465481 4_3:-1841334 Msa0623990:CDS
AGTCAGAGAACTTCGATGAA+TGG 0.466105 4_3:-1839613 Msa0623990:CDS
ACATGAAAACGGCGGTGGCT+AGG 0.467893 4_3:+1841686 None:intergenic
CAGGTTTCAGTTCAGTTTCA+CGG 0.468835 4_3:+1840697 None:intergenic
AGAAAGTTCCATGAAATGTC+TGG 0.469001 4_3:-1839223 Msa0623990:CDS
AAAGAGAACAGTGTTGTAGC+TGG 0.470049 4_3:-1837239 Msa0623990:CDS
TGAACCGTAACTTGGTGATT+CGG 0.470375 4_3:+1836916 None:intergenic
GGTTTGTTGAACCGAAGATT+GGG 0.471984 4_3:+1841708 None:intergenic
GCCCTGACAACGAACTTCTC+TGG 0.472536 4_3:-1837275 Msa0623990:CDS
GGGAAGGTTCTAGATTGGTT+AGG 0.473324 4_3:-1841400 Msa0623990:CDS
TCTGTTGCTGAGAGTGAGAT+TGG 0.473326 4_3:-1840438 Msa0623990:CDS
ACCAGAAACCTTTACCTTGG+TGG 0.473554 4_3:-1836408 Msa0623990:three_prime_UTR
AGATCGGGAAGGTTCTAGAT+TGG 0.474216 4_3:-1841405 Msa0623990:CDS
TTGTTCTTGTCCTTTCTGGC+TGG 0.474217 4_3:+1839321 None:intergenic
GAAGCAGCAACGCAAGCCCC+TGG 0.476117 4_3:-1839889 Msa0623990:CDS
AAAACAGACCTTGTCGAGTA+AGG 0.476545 4_3:-1840562 Msa0623990:CDS
GGGATCACCCTGCTGAGATA+GGG 0.477335 4_3:+1839657 None:intergenic
AATCGCGTGCTGACGATGCT+AGG 0.477368 4_3:-1837007 Msa0623990:CDS
TTCAGTTCAGTTTCACGGAC+CGG 0.478484 4_3:+1840702 None:intergenic
CACAGTATCCACCAAGGTAA+AGG 0.479695 4_3:+1836400 None:intergenic
GGACCTTCCATGTCATCTAC+CGG 0.480629 4_3:+1840072 None:intergenic
GAGAGAGAAAGAGAAAGAGT+TGG 0.481459 4_3:+1841858 None:intergenic
ATCATGTCGAAGTCAGTTGC+CGG 0.481649 4_3:-1838942 Msa0623990:CDS
GGGATCGATCGAGGAGGGAG+GGG 0.482349 4_3:-1841085 Msa0623990:CDS
TTTGAACATGAAAATGAGAA+TGG 0.482507 4_3:-1836823 Msa0623990:CDS
GATGGGTTTGATAGGAGGAA+GGG 0.483212 4_3:-1841356 Msa0623990:CDS
TCGGTATAGCCGGGACAGCC+GGG 0.483568 4_3:-1841315 Msa0623990:CDS
GCAGTCGAAGAAGAGAAATT+CGG 0.484736 4_3:-1840907 Msa0623990:CDS
GAACAATCGAAGAGTGTTAG+TGG 0.485748 4_3:-1840813 Msa0623990:CDS
TTGGCAAGCCCTATCTCAGC+AGG 0.487463 4_3:-1839665 Msa0623990:CDS
CGTCTTCGTCGCGATACGAT+AGG 0.487476 4_3:-1841445 Msa0623990:CDS
ATTGTGCCGGCGGCGAGATG+TGG 0.488558 4_3:+1841732 None:intergenic
TGTCTCAGTGAACCGTAACT+TGG 0.489405 4_3:+1836908 None:intergenic
CGGGGATGATACTCGGTGTA+AGG 0.489723 4_3:-1840373 Msa0623990:CDS
GTGCTTGACTGGGAGATCCA+GGG 0.490003 4_3:+1839872 None:intergenic
AGGGATCGATCGAGGAGGGA+GGG 0.490373 4_3:-1841086 Msa0623990:CDS
GTGGTAGTAGGGTTGAAGAG+AGG 0.491088 4_3:-1841001 Msa0623990:CDS
TTTACCAGCCACAAGCATCA+TGG 0.491961 4_3:-1839579 Msa0623990:CDS
AAACGCAGAGCACATGAAAA+CGG 0.492306 4_3:+1841675 None:intergenic
CATGAAAACGGCGGTGGCTA+GGG 0.492493 4_3:+1841687 None:intergenic
GTCGTGGAGGAGAGGATTGA+AGG 0.492911 4_3:-1841054 Msa0623990:CDS
TTACCAGCCACAAGCATCAT+GGG 0.496617 4_3:-1839578 Msa0623990:CDS
CCTATCGGTAACAGAACATT+CGG 0.496910 4_3:+1839919 None:intergenic
AGAAATGGACATAGTACTAC+TGG 0.501578 4_3:-1838749 Msa0623990:CDS
GGCAGTCGCCCCTTGTTCCA+GGG 0.502207 4_3:-1839694 Msa0623990:CDS
GGGTGCTGAAAGGAATATTG+GGG 0.502518 4_3:-1841255 Msa0623990:CDS
GTCTTCGTCGCGATACGATA+GGG 0.502800 4_3:-1841444 Msa0623990:CDS
CCAATCAAATCCCTGGAACA+AGG 0.504548 4_3:+1839684 None:intergenic
TGAAATGCGTAAGCGAAAGT+TGG 0.504590 4_3:-1836883 Msa0623990:CDS
AGCAGAAAAGTCTGATAGCT+CGG 0.509871 4_3:-1840004 Msa0623990:CDS
CGATAGGGATCGAACGGTGG+AGG 0.511382 4_3:-1841429 Msa0623990:CDS
TATGATATTCTTTGAGTCAA+CGG 0.511535 4_3:+1841816 None:intergenic
TTTGATCTGGTCACATTGCA+AGG 0.511877 4_3:+1836751 None:intergenic
TCCAGAGAAGTTCGTTGTCA+GGG 0.513739 4_3:+1837274 None:intergenic
GTGGACTATGAACAATCTGT+TGG 0.513925 4_3:-1839727 Msa0623990:CDS
AGCCGGGACAGCCGGGATGG+TGG 0.513979 4_3:-1841308 Msa0623990:CDS
AACGATGACAGTCTTGCAAT+GGG 0.514322 4_3:-1839967 Msa0623990:CDS
CAATCAAATCCCTGGAACAA+GGG 0.515903 4_3:+1839685 None:intergenic
TACTCGGTGTAAGGAGGAAA+CGG 0.517106 4_3:-1840364 Msa0623990:CDS
CAACAGGTTCAGAGTGGAAG+TGG 0.517958 4_3:-1840759 Msa0623990:CDS
TGGATTGTGATATAATGATT+GGG 0.518014 4_3:+1839774 None:intergenic
ACCCACCATCCCGGCTGTCC+CGG 0.518879 4_3:+1841306 None:intergenic
GGGATCGGGATCGGTATAGC+CGG 0.523850 4_3:-1841325 Msa0623990:CDS
GGGCTTGCCAATCAAATCCC+TGG 0.524090 4_3:+1839677 None:intergenic
GCCGGGACAGCCGGGATGGT+GGG 0.524239 4_3:-1841307 Msa0623990:CDS
CAAGACGACATGATGATGTT+CGG 0.526380 4_3:-1839438 Msa0623990:CDS
GGGTGTTGAAAGGAATAGTG+GGG 0.526569 4_3:-1841192 Msa0623990:CDS
GAACGATGACAGTCTTGCAA+TGG 0.526588 4_3:-1839968 Msa0623990:CDS
CATTCTGGTCAAATCTTGGA+AGG 0.527568 4_3:+1837141 None:intergenic
AAGCTTTGTGTGCAGAAGAA+TGG 0.528019 4_3:-1838902 Msa0623990:CDS
TGCTCCGAAAGATGAAGCAT+CGG 0.528261 4_3:-1840676 Msa0623990:CDS
TGATAAAAGGACAATGGTGC+AGG 0.529181 4_3:-1837120 Msa0623990:CDS
CATCGAACTACCAGCCAGAA+AGG 0.529427 4_3:-1839331 Msa0623990:CDS
GGGGTGTTGAAAGGAATAGT+GGG 0.529488 4_3:-1841193 Msa0623990:CDS
GATGGCTTGTGGATTGATAG+AGG 0.529833 4_3:-1840117 Msa0623990:CDS
TAGGAGGAAGGGTTTCGATC+GGG 0.530240 4_3:-1841345 Msa0623990:CDS
TAGGAATTTGATTCATAGGT+CGG 0.532087 4_3:-1841162 Msa0623990:CDS
ACATATGAAAGAGGGTATTC+GGG 0.532178 4_3:-1839188 Msa0623990:CDS
AGCGAAGATCTTCATTCGTA+TGG 0.533990 4_3:-1841596 Msa0623990:CDS
ATTCTTCAAAAGATGGCTTG+TGG 0.534766 4_3:-1840128 Msa0623990:CDS
CTTATCATCAACATTACTTG+TGG 0.534926 4_3:+1840413 None:intergenic
CGGGATGGTGGGTACAGTGG+AGG 0.536054 4_3:-1841296 Msa0623990:CDS
TAAACCAGAAACCTTTACCT+TGG 0.536788 4_3:-1836411 Msa0623990:three_prime_UTR
AACAAACCCGAGTCAATTGA+AGG 0.536904 4_3:-1840270 Msa0623990:CDS
AGCCGGGATGGTGGGTACAG+TGG 0.537437 4_3:-1841299 Msa0623990:CDS
GTTGAGCCTTCAATTGACTC+GGG 0.539241 4_3:+1840264 None:intergenic
TGTTGTAGCTGGGCCCAGCC+AGG 0.542218 4_3:-1837228 Msa0623990:CDS
AGTGGTAGTGAAATGGAAGA+GGG 0.542958 4_3:-1840741 Msa0623990:CDS
TCTGGTTTATAACTTTCCTA+CGG 0.543796 4_3:+1836425 None:intergenic
GCTCCGAAAGATGAAGCATC+GGG 0.544089 4_3:-1840675 Msa0623990:CDS
TGAACACTCCGTGCTTGACT+GGG 0.546003 4_3:+1839862 None:intergenic
TGCTTCTTCCTTACTCGACA+AGG 0.546031 4_3:+1840554 None:intergenic
AAGTAATGTTGATGATAAGA+AGG 0.546274 4_3:-1840409 Msa0623990:CDS
TGGTAGTGAAATGGAAGAGG+GGG 0.546954 4_3:-1840739 Msa0623990:CDS
TATAGCCGGGACAGCCGGGA+TGG 0.547401 4_3:-1841311 Msa0623990:CDS
GTCAAGGAGGGAGTTTCCGA+AGG 0.549461 4_3:-1841123 Msa0623990:CDS
AAGAAGGACGAGTGTTTGAA+CGG 0.551256 4_3:-1840393 Msa0623990:CDS
TGGAACTTTCTCGACATCAC+GGG 0.551484 4_3:+1839235 None:intergenic
AGCTAAGAGAAAGGTCAAGC+TGG 0.551826 4_3:+1839944 None:intergenic
GAATGATCTTGCAACATGCC+CGG 0.552014 4_3:-1840091 Msa0623990:CDS
TTAGACACTCAAGCTTTGAA+AGG 0.552843 4_3:-1839550 Msa0623990:CDS
CAATCTGTTGGAAAATCAGT+TGG 0.553388 4_3:-1839715 Msa0623990:CDS
AGAGAAATTCGGAGTCTCCA+AGG 0.553608 4_3:-1840896 Msa0623990:CDS
TTTGACTTAATTGTCAACCT+TGG 0.553670 4_3:+1838515 None:intergenic
TTAACCTCCCTAAACACCCT+TGG 0.554055 4_3:+1840879 None:intergenic
TTTGTTGAAGAATTATGAAG+AGG 0.554208 4_3:-1841628 Msa0623990:exon
TCTGTTACCGATAGGAGCTC+AGG 0.555320 4_3:-1839911 Msa0623990:CDS
CGTGAGGAGGATAATGGTGT+AGG 0.557032 4_3:-1840297 Msa0623990:CDS
GGGAGGGGAGTGTGTCGTCG+TGG 0.557078 4_3:-1841070 Msa0623990:CDS
CCGAAGATTGGGAATTGTGC+CGG 0.557095 4_3:+1841719 None:intergenic
AGAGTTTCTGTGGAGGGTCA+AGG 0.557125 4_3:-1841139 Msa0623990:CDS
GTACATGACACATATGAAAG+AGG 0.557470 4_3:-1839197 Msa0623990:CDS
TTGCAATCACATTCATCGAC+CGG 0.558083 4_3:+1838923 None:intergenic
ACAAAGCCAAACATCTCAGA+AGG 0.559512 4_3:+1838677 None:intergenic
ATGCACTTGTTTGTCCTCAG+AGG 0.560037 4_3:+1840635 None:intergenic
GTGTAAGGAGGAAACGGAGA+AGG 0.560909 4_3:-1840358 Msa0623990:CDS
ATGATGCGTCTCAAAACCTC+AGG 0.563941 4_3:+1838488 None:intergenic
GTCAGCCGAATCTCTTTACA+AGG 0.565193 4_3:-1838621 Msa0623990:CDS
TATGTGCCCTCTCTAATCCA+TGG 0.566646 4_3:+1836853 None:intergenic
AAGAACTCCATGGATTAGAG+AGG 0.566731 4_3:-1836860 Msa0623990:CDS
GCTGCTTCCTGAGCTCCTAT+CGG 0.566753 4_3:+1839904 None:intergenic
ATAGGAGGAAGGGTTTCGAT+CGG 0.566905 4_3:-1841346 Msa0623990:CDS
GTTTGAACGGGGATGATACT+CGG 0.567246 4_3:-1840380 Msa0623990:CDS
GTTTCCGAAGGGGTTTCGAT+CGG 0.567385 4_3:-1841111 Msa0623990:CDS
GATGTTTGGCTTTGTCAAAG+AGG 0.568253 4_3:-1838669 Msa0623990:CDS
CACCCCATGATGCTTGTGGC+TGG 0.572207 4_3:+1839575 None:intergenic
GAAGGGGTTTCGATCGGAGA+GGG 0.575030 4_3:-1841105 Msa0623990:CDS
ATGGAACTTTCTCGACATCA+CGG 0.575071 4_3:+1839234 None:intergenic
CCGAATGTTCTGTTACCGAT+AGG 0.576813 4_3:-1839919 Msa0623990:CDS
TTGCAGATCAAATGCTGCCA+AGG 0.578923 4_3:-1838532 Msa0623990:CDS
GGGGTGCTGAAAGGAACAGT+GGG 0.579440 4_3:-1841235 Msa0623990:CDS
GAAGGGAACAGATAAGGGGA+AGG 0.582797 4_3:-1840340 Msa0623990:CDS
TCAAGGAGGGAGTTTCCGAA+GGG 0.582866 4_3:-1841122 Msa0623990:CDS
CATCGAAGTTCTCTGACTAG+AGG 0.583403 4_3:+1839618 None:intergenic
AAGTGGTAGTGAAATGGAAG+AGG 0.583818 4_3:-1840742 Msa0623990:CDS
TGCTTGACTGGGAGATCCAG+GGG 0.586040 4_3:+1839873 None:intergenic
GAGAGTAGTAGAGGGAGTGG+TGG 0.586336 4_3:-1841023 Msa0623990:CDS
GTTCTTCTGACTGTCGCCGT+AGG 0.586875 4_3:-1836441 Msa0623990:three_prime_UTR
GGATCGGGATCGGTATAGCC+GGG 0.587822 4_3:-1841324 Msa0623990:CDS
AAGAGAACAGTGTTGTAGCT+GGG 0.587864 4_3:-1837238 Msa0623990:CDS
ATCGAAGTTCTCTGACTAGA+GGG 0.588684 4_3:+1839619 None:intergenic
GGTGTTGAAAGGAATAGTGG+GGG 0.589132 4_3:-1841191 Msa0623990:CDS
AAGACTGATAACTACTGTGA+TGG 0.591770 4_3:+1836558 None:intergenic
GAGGGTGGTTAGGTCACCGA+AGG 0.592201 4_3:-1840982 Msa0623990:CDS
TCACCGCCACATCTCGCCGC+CGG 0.593511 4_3:-1841738 Msa0623990:five_prime_UTR
CGAAAGTTGGAAGAACTCCA+TGG 0.594395 4_3:-1836870 Msa0623990:CDS
AGGGGAGTGTGTCGTCGTGG+AGG 0.595185 4_3:-1841067 Msa0623990:CDS
AGTGTGTCGTCGTGGAGGAG+AGG 0.596183 4_3:-1841062 Msa0623990:CDS
TCCGAATCCTTCGACCAACT+GGG 0.596997 4_3:+1840936 None:intergenic
GTCTCCAAGGGTGTTTAGGG+AGG 0.597674 4_3:-1840883 Msa0623990:CDS
CTGGATCTCCCAGTCAAGCA+CGG 0.597709 4_3:-1839870 Msa0623990:CDS
TGAATAAATAGATTTCAGCC+AGG 0.598862 4_3:+1837199 None:intergenic
GGTGCTGAAAGGAACAGTGG+GGG 0.600251 4_3:-1841233 Msa0623990:CDS
GAGAAATTCGGAGTCTCCAA+GGG 0.600651 4_3:-1840895 Msa0623990:CDS
CATAGGTCGGAGAGTTTCTG+TGG 0.600741 4_3:-1841149 Msa0623990:CDS
TCAACCGAATCACCAAGTTA+CGG 0.601080 4_3:-1836920 Msa0623990:CDS
GTCATACTGACTGTGGATTG+CGG 0.601252 4_3:-1838784 Msa0623990:CDS
GTGGTAGTGAAATGGAAGAG+GGG 0.601940 4_3:-1840740 Msa0623990:CDS
TGATGTTACTGATGAAGTGA+AGG 0.601987 4_3:-1840235 Msa0623990:CDS
GAACAGGTCTGATATAACCT+TGG 0.602340 4_3:-1839107 Msa0623990:CDS
GGAGAGGGATCGATCGAGGA+GGG 0.602511 4_3:-1841090 Msa0623990:CDS
TGAGGTAAAAGTTACAGGAA+AGG 0.603046 4_3:-1840508 Msa0623990:CDS
CATTCGGCAAGCTAAGAGAA+AGG 0.603366 4_3:+1839935 None:intergenic
AGGTGTTGATAGGAATATTG+GGG 0.605295 4_3:-1841276 Msa0623990:CDS
ATGGAAGGTCCAAGCACAAG+AGG 0.605618 4_3:-1840060 Msa0623990:CDS
CATTTGTTTGCTTACCAGAG+AGG 0.605904 4_3:+1838459 None:intergenic
TAGATGAAATATTATCACCT+AGG 0.606756 4_3:+1839008 None:intergenic
GGTCGGAGAGTTTCTGTGGA+GGG 0.606932 4_3:-1841145 Msa0623990:CDS
CTCCACTGTACCCACCATCC+CGG 0.607331 4_3:+1841297 None:intergenic
TACGCAGGATATTGATTCTG+AGG 0.607410 4_3:-1840526 Msa0623990:CDS
AATCAAATCCCTGGAACAAG+GGG 0.608355 4_3:+1839686 None:intergenic
GTGCCGGCGGCGAGATGTGG+CGG 0.609868 4_3:+1841735 None:intergenic
GACCTTCCATGTCATCTACC+GGG 0.610088 4_3:+1840073 None:intergenic
TAGTAGGGTTGAAGAGAGGG+TGG 0.610637 4_3:-1840997 Msa0623990:CDS
GAAGGCGATGCTTAATGAAG+AGG 0.611004 4_3:-1840322 Msa0623990:CDS
TTAGCCCATTATCTTCACCT+AGG 0.613147 4_3:-1839025 Msa0623990:CDS
GAAATCACCCAGTTGGTCGA+AGG 0.614855 4_3:-1840943 Msa0623990:CDS
TTTCTGTGGAGGGTCAAGGA+GGG 0.615184 4_3:-1841135 Msa0623990:CDS
GATCGGAGAGGGATCGATCG+AGG 0.615220 4_3:-1841094 Msa0623990:CDS
CATTCGTATGGTGAAAAGAA+CGG 0.615666 4_3:-1841584 Msa0623990:CDS
TACATGACACATATGAAAGA+GGG 0.616431 4_3:-1839196 Msa0623990:CDS
GACAACGAACTTCTCTGGAA+AGG 0.621662 4_3:-1837270 Msa0623990:CDS
TAATGAAGAGGAGCGTGAGG+AGG 0.622117 4_3:-1840310 Msa0623990:CDS
AAAAGGGAAAGGAGTAGTGG+TGG 0.623501 4_3:-1839358 Msa0623990:CDS
GGGATGTGAAATCACCCAGT+TGG 0.623530 4_3:-1840950 Msa0623990:CDS
CGGAGAAGGGAACAGATAAG+GGG 0.623786 4_3:-1840344 Msa0623990:CDS
ATAGTACTACTGGAACAAAA+GGG 0.625443 4_3:-1838739 Msa0623990:CDS
CACTGGTGTCATACTGACTG+TGG 0.625548 4_3:-1838791 Msa0623990:CDS
TCCGAATCCTTAGACACAGA+AGG 0.626857 4_3:+1840840 None:intergenic
CTGCCAGCAAGGATATAAGA+GGG 0.627857 4_3:-1838571 Msa0623990:CDS
GAGGAGGATAATGGTGTAGG+TGG 0.628735 4_3:-1840294 Msa0623990:CDS
AACATGCCCGGTAGATGACA+TGG 0.629167 4_3:-1840079 Msa0623990:CDS
AGTGTTGGGTCTCATGACAA+TGG 0.629903 4_3:-1839403 Msa0623990:CDS
CGAAGGGGTTTCGATCGGAG+AGG 0.629965 4_3:-1841106 Msa0623990:CDS
CAAGGAGGGAGTTTCCGAAG+GGG 0.630082 4_3:-1841121 Msa0623990:CDS
ACACTTCACTAGAACATCCA+AGG 0.630115 4_3:+1839090 None:intergenic
AGAGCACATGAAAACGGCGG+TGG 0.631826 4_3:+1841681 None:intergenic
GAAAAGCAAGTATCTGACCA+TGG 0.632368 4_3:+1839143 None:intergenic
GCTTAATGAAGAGGAGCGTG+AGG 0.632743 4_3:-1840313 Msa0623990:CDS
GGGTGCTGAAAGGAACAGTG+GGG 0.633145 4_3:-1841234 Msa0623990:CDS
AGGAACTTGAATATGTGAAG+AGG 0.635641 4_3:-1838601 Msa0623990:CDS
CCAGAATGATAAAAGGACAA+TGG 0.636845 4_3:-1837126 Msa0623990:CDS
AATTAAGTCAAACCTTCCTG+AGG 0.637322 4_3:-1838504 Msa0623990:CDS
GTTTCTGTGGAGGGTCAAGG+AGG 0.637748 4_3:-1841136 Msa0623990:CDS
TGTAAGGAGGAAACGGAGAA+GGG 0.640951 4_3:-1840357 Msa0623990:CDS
GGTGCTGAAAGGAATATTGG+GGG 0.641525 4_3:-1841254 Msa0623990:CDS
CTTGCAGGTCTTTCCAACAG+AGG 0.643827 4_3:+1837167 None:intergenic
GGAAGAAGCAAAACATACGC+AGG 0.644541 4_3:-1840541 Msa0623990:CDS
ATGCTAGGAGAGAAGCTGAA+GGG 0.646548 4_3:-1836992 Msa0623990:CDS
AGAACTCCATGGATTAGAGA+GGG 0.646920 4_3:-1836859 Msa0623990:CDS
TGAGACCCAACACTCTGCGT+AGG 0.648504 4_3:+1839412 None:intergenic
TGTTGAGGTGAAGAAAAGCG+AGG 0.648727 4_3:-1840790 Msa0623990:CDS
GATGCTAGGAGAGAAGCTGA+AGG 0.651142 4_3:-1836993 Msa0623990:CDS
AGGTCGGAGAGTTTCTGTGG+AGG 0.651646 4_3:-1841146 Msa0623990:CDS
AAAACACCCCATGATGCTTG+TGG 0.652227 4_3:+1839571 None:intergenic
ATGCTCAATGCAGATAGCCA+TGG 0.652832 4_3:-1839160 Msa0623990:CDS
AGAACTTCGATGAATGGGAA+CGG 0.653144 4_3:-1839607 Msa0623990:CDS
AAGAACGGTGGTGATAAGAA+TGG 0.654195 4_3:-1841569 Msa0623990:CDS
GGATGATACTCGGTGTAAGG+AGG 0.654821 4_3:-1840370 Msa0623990:CDS
GAAGAGTGTTAGTGGTGTTG+AGG 0.658892 4_3:-1840805 Msa0623990:CDS
GCGATACGATAGGGATCGAA+CGG 0.659666 4_3:-1841435 Msa0623990:CDS
GACCAGTAGATGAAAACGAA+CGG 0.660474 4_3:+1841522 None:intergenic
CAAAGCCAAACATCTCAGAA+GGG 0.670647 4_3:+1838678 None:intergenic
TGGAAGGTCCAAGCACAAGA+GGG 0.670729 4_3:-1840059 Msa0623990:CDS
TTGTTGCAACAGGTTCAGAG+TGG 0.674171 4_3:-1840765 Msa0623990:CDS
TGGTGATAAGAATGGTGTGA+AGG 0.677204 4_3:-1841561 Msa0623990:CDS
TGCGTCTCAAAACCTCAGGA+AGG 0.680224 4_3:+1838492 None:intergenic
GAGTGTGATCAACAATGTGA+AGG 0.680558 4_3:-1840190 Msa0623990:CDS
AGGGTGGTTAGGTCACCGAA+GGG 0.680868 4_3:-1840981 Msa0623990:CDS
GATGTTACTGATGAAGTGAA+GGG 0.683672 4_3:-1840234 Msa0623990:CDS
AAGATTGGGAATTGTGCCGG+CGG 0.686037 4_3:+1841722 None:intergenic
TGCCCGGTAGATGACATGGA+AGG 0.686504 4_3:-1840075 Msa0623990:CDS
CGGAGAGGGATCGATCGAGG+AGG 0.689214 4_3:-1841091 Msa0623990:CDS
TACCAGCCACAAGCATCATG+GGG 0.689300 4_3:-1839577 Msa0623990:CDS
TGGCAAGCCCTATCTCAGCA+GGG 0.695332 4_3:-1839664 Msa0623990:CDS
AGTGAAGGGAGAAACAATGA+CGG 0.696157 4_3:-1840220 Msa0623990:CDS
TGAAGTCCAGCAAACCTCTG+AGG 0.696699 4_3:-1840649 Msa0623990:CDS
ATACGATAGGGATCGAACGG+TGG 0.706786 4_3:-1841432 Msa0623990:CDS
TCAAAGCACAGTATCCACCA+AGG 0.724110 4_3:+1836394 None:intergenic
TCGTATGGTGAAAAGAACGG+TGG 0.728200 4_3:-1841581 Msa0623990:CDS
GAAGGACGAGTGTTTGAACG+GGG 0.729636 4_3:-1840391 Msa0623990:CDS
CGCAGAGCACATGAAAACGG+CGG 0.745518 4_3:+1841678 None:intergenic
GGTGTTGATAGGAATATTGG+GGG 0.760455 4_3:-1841275 Msa0623990:CDS
ACGGTGGAGGAAGATCGGGA+AGG 0.763333 4_3:-1841416 Msa0623990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAGAAAATAAAAAAA+AGG + chr4_3:1836489-1836508 None:intergenic 10.0%
!!! TTTTATTAGAATACAAAAAA+TGG - chr4_3:1841772-1841791 Msa0623990:five_prime_UTR 10.0%
!!! ATTATAGTTTTGAGAAAAAA+AGG - chr4_3:1838893-1838912 Msa0623990:CDS 15.0%
!!! TTATAGTTTTGAGAAAAAAA+GGG - chr4_3:1838894-1838913 Msa0623990:CDS 15.0%
!! TAAGATTATGAAACTATTAT+AGG + chr4_3:1839835-1839854 None:intergenic 15.0%
!!! TATATGGAATTATCATTTTT+TGG - chr4_3:1839920-1839939 Msa0623990:CDS 15.0%
!! AAAATTTAACACAACAATAT+GGG + chr4_3:1840079-1840098 None:intergenic 15.0%
!! TAAAATTTAACACAACAATA+TGG + chr4_3:1840080-1840099 None:intergenic 15.0%
!!! GTAAAAAAAAGACATTTTAT+TGG - chr4_3:1840835-1840854 Msa0623990:CDS 15.0%
!!! ATATTTAGAATAGTTTTTTC+AGG - chr4_3:1841540-1841559 Msa0623990:CDS 15.0%
!! ATTTCATATACTGGAAAATT+AGG + chr4_3:1839876-1839895 None:intergenic 20.0%
!! TATATTTGAACATTGTACTT+TGG - chr4_3:1840019-1840038 Msa0623990:CDS 20.0%
!! ATATTTGAACATTGTACTTT+GGG - chr4_3:1840020-1840039 Msa0623990:CDS 20.0%
!! ATGAATTATTATTGCTACTA+AGG - chr4_3:1840192-1840211 Msa0623990:CDS 20.0%
!! CTGAATGACATAAATTATAA+TGG - chr4_3:1840229-1840248 Msa0623990:CDS 20.0%
!!! TTGAATCTTGAATTATTTTG+AGG - chr4_3:1840774-1840793 Msa0623990:CDS 20.0%
!! TTAAGCTGATATATCATATA+TGG + chr4_3:1840801-1840820 None:intergenic 20.0%
!! GAAATCTATTTATTCAGATA+AGG - chr4_3:1841076-1841095 Msa0623990:CDS 20.0%
!!! CTATTCTAAATATTTTGATC+TGG + chr4_3:1841533-1841552 None:intergenic 20.0%
!! AATAAATACAACTACAAATC+AGG + chr4_3:1841639-1841658 None:intergenic 20.0%
! TATGATATTCTTTGAGTCAA+CGG + chr4_3:1836455-1836474 None:intergenic 25.0%
! TTTGTTGAAGAATTATGAAG+AGG - chr4_3:1836640-1836659 Msa0623990:three_prime_UTR 25.0%
!! GAGAAGTTTTTATTATAAGC+AGG - chr4_3:1836770-1836789 Msa0623990:CDS 25.0%
!!! AAGTAATGTTGATGATAAGA+AGG - chr4_3:1837859-1837878 Msa0623990:intron 25.0%
! TGGATTGTGATATAATGATT+GGG + chr4_3:1838497-1838516 None:intergenic 25.0%
! TTGGATTGTGATATAATGAT+TGG + chr4_3:1838498-1838517 None:intergenic 25.0%
!!! TTTTTTGTTAGAGAACAACT+TGG + chr4_3:1838517-1838536 None:intergenic 25.0%
! TTCTCTAACAAAAAATTCAG+TGG - chr4_3:1838522-1838541 Msa0623990:CDS 25.0%
!! AGTTTTCATAAGCAAATTTC+AGG - chr4_3:1838802-1838821 Msa0623990:CDS 25.0%
! TAGATGAAATATTATCACCT+AGG + chr4_3:1839263-1839282 None:intergenic 25.0%
!! TTTTTCTAAACTTGAAGTGT+AGG - chr4_3:1839298-1839317 Msa0623990:CDS 25.0%
!! TTCAAAATTTTGCAAAAGAG+TGG - chr4_3:1839625-1839644 Msa0623990:CDS 25.0%
! TAAACATTGATCTCTGTATA+TGG - chr4_3:1839904-1839923 Msa0623990:CDS 25.0%
! AAACCAAAATACAGGTTTAT+AGG + chr4_3:1840114-1840133 None:intergenic 25.0%
!! TGCAAAGTATACATTTTTCA+TGG - chr4_3:1840163-1840182 Msa0623990:CDS 25.0%
!! GTATACATTTTTCATGGTAT+TGG - chr4_3:1840169-1840188 Msa0623990:CDS 25.0%
! CAAAATTCTGAACTAAATTG+AGG + chr4_3:1840460-1840479 None:intergenic 25.0%
!! TAGTTCAGAATTTTGTTCTT+TGG - chr4_3:1840465-1840484 Msa0623990:CDS 25.0%
! TTAAACAATGTTTGCATCAT+TGG - chr4_3:1840491-1840510 Msa0623990:CDS 25.0%
! ATCATACATTCATACTGAAT+CGG + chr4_3:1840648-1840667 None:intergenic 25.0%
! TAAATCAAATGAAAAGTGGT+TGG + chr4_3:1840750-1840769 None:intergenic 25.0%
! GTCATAAATCAAATGAAAAG+TGG + chr4_3:1840754-1840773 None:intergenic 25.0%
! AATAAAAATCAAACATGCAG+AGG - chr4_3:1841226-1841245 Msa0623990:CDS 25.0%
!! AATTTTCTCATTCTTTGCAA+GGG + chr4_3:1841315-1841334 None:intergenic 25.0%
! TTTGAACATGAAAATGAGAA+TGG - chr4_3:1841445-1841464 Msa0623990:CDS 25.0%
GAAGAATTATGAAGAGGTTA+AGG - chr4_3:1836646-1836665 Msa0623990:three_prime_UTR 30.0%
ATTATAAGCAGGAGAATGTA+AGG - chr4_3:1836781-1836800 Msa0623990:CDS 30.0%
!!! ATGATTTTGATGGGTTTGAT+AGG - chr4_3:1836904-1836923 Msa0623990:CDS 30.0%
GAGATAGGAATTTGATTCAT+AGG - chr4_3:1837102-1837121 Msa0623990:CDS 30.0%
TAGGAATTTGATTCATAGGT+CGG - chr4_3:1837106-1837125 Msa0623990:CDS 30.0%
!! ATTTTGATGAGAGTAGTAGA+GGG - chr4_3:1837237-1837256 Msa0623990:CDS 30.0%
AAAAAGAATGAATGTCGTTC+AGG - chr4_3:1837659-1837678 Msa0623990:intron 30.0%
GCAACAGATATTTCATTAGT+TGG + chr4_3:1837818-1837837 None:intergenic 30.0%
CTTATCATCAACATTACTTG+TGG + chr4_3:1837858-1837877 None:intergenic 30.0%
TTCATCAGTAACATCATTCT+CGG + chr4_3:1838029-1838048 None:intergenic 30.0%
ATCAACAATGTGAAGGATAA+AGG - chr4_3:1838085-1838104 Msa0623990:intron 30.0%
! ACATTTTGTACTAACTCAGA+TGG - chr4_3:1838442-1838461 Msa0623990:intron 30.0%
!!! GTTTTGAGAAAAAAAGGGAA+AGG - chr4_3:1838899-1838918 Msa0623990:CDS 30.0%
TACATGACACATATGAAAGA+GGG - chr4_3:1839072-1839091 Msa0623990:CDS 30.0%
TTCAAAAAATTCTGCAGAAC+AGG - chr4_3:1839145-1839164 Msa0623990:CDS 30.0%
! ATTCTGGTTGCAATAAAAAC+TGG - chr4_3:1839219-1839238 Msa0623990:CDS 30.0%
CGGGAATCTTATATTAGAAA+TGG - chr4_3:1839504-1839523 Msa0623990:CDS 30.0%
ATAGTACTACTGGAACAAAA+GGG - chr4_3:1839529-1839548 Msa0623990:CDS 30.0%
AAGTTCCTTGTAAAGAGATT+CGG + chr4_3:1839655-1839674 None:intergenic 30.0%
! TTTGACTTAATTGTCAACCT+TGG + chr4_3:1839756-1839775 None:intergenic 30.0%
AATGCAAGCATTTCATATAC+TGG + chr4_3:1839885-1839904 None:intergenic 30.0%
!!! CATTTTTTGGCAACTGTATA+TGG - chr4_3:1839933-1839952 Msa0623990:CDS 30.0%
! ATGCCTATAAACCTGTATTT+TGG - chr4_3:1840108-1840127 Msa0623990:CDS 30.0%
CACTAAAGAAACCAAAATAC+AGG + chr4_3:1840122-1840141 None:intergenic 30.0%
!!! CTGTATTTTGGTTTCTTTAG+TGG - chr4_3:1840120-1840139 Msa0623990:CDS 30.0%
TCTTTAGTGGTTAGAACATT+AGG - chr4_3:1840133-1840152 Msa0623990:CDS 30.0%
ATGTGGAATATAGTTAGTGA+TGG - chr4_3:1840359-1840378 Msa0623990:CDS 30.0%
ATATATGCCGAACTAAATTG+AGG + chr4_3:1840390-1840409 None:intergenic 30.0%
AAAGTTGACCAAACAGAAAA+CGG + chr4_3:1840721-1840740 None:intergenic 30.0%
CGATAATCAAATTGTAAACC+AGG + chr4_3:1840913-1840932 None:intergenic 30.0%
AACCATGTTTACATGCATTA+TGG - chr4_3:1840940-1840959 Msa0623990:CDS 30.0%
AACCATAATGCATGTAAACA+TGG + chr4_3:1840945-1840964 None:intergenic 30.0%
TGAATAAATAGATTTCAGCC+AGG + chr4_3:1841072-1841091 None:intergenic 30.0%
TTATCATTCTGGTCAAATCT+TGG + chr4_3:1841134-1841153 None:intergenic 30.0%
GATTTGACCAGAATGATAAA+AGG - chr4_3:1841135-1841154 Msa0623990:CDS 30.0%
AGTAGTGTTCATAAAGACTT+TGG - chr4_3:1841182-1841201 Msa0623990:CDS 30.0%
!!! AGACTTTGGTTTTGATGAAT+TGG - chr4_3:1841196-1841215 Msa0623990:CDS 30.0%
! CAATTTTCTCATTCTTTGCA+AGG + chr4_3:1841316-1841335 None:intergenic 30.0%
CAAAGATCTGTTATCCAAAA+TGG - chr4_3:1841478-1841497 Msa0623990:CDS 30.0%
!!! CATTTTAGTTGCTTCCATTT+TGG + chr4_3:1841495-1841514 None:intergenic 30.0%
TACAAAAAATGGTCAGCATT+TGG - chr4_3:1841783-1841802 Msa0623990:five_prime_UTR 30.0%
! TCTGGTTTATAACTTTCCTA+CGG + chr4_3:1841846-1841865 None:intergenic 30.0%
CATTCGTATGGTGAAAAGAA+CGG - chr4_3:1836684-1836703 Msa0623990:three_prime_UTR 35.0%
! AGATCTGAGCATGATTTTGA+TGG - chr4_3:1836894-1836913 Msa0623990:CDS 35.0%
!! GATCTGAGCATGATTTTGAT+GGG - chr4_3:1836895-1836914 Msa0623990:CDS 35.0%
!!! ATTTTGATGGGTTTGATAGG+AGG - chr4_3:1836907-1836926 Msa0623990:CDS 35.0%
!! GAGGTGTTGATAGGAATATT+GGG - chr4_3:1836991-1837010 Msa0623990:CDS 35.0%
!! AGGTGTTGATAGGAATATTG+GGG - chr4_3:1836992-1837011 Msa0623990:CDS 35.0%
!! GATTTTGATGAGAGTAGTAG+AGG - chr4_3:1837236-1837255 Msa0623990:CDS 35.0%
!! GATTCTGAGGTAAAAGTTAC+AGG - chr4_3:1837755-1837774 Msa0623990:intron 35.0%
TGAGGTAAAAGTTACAGGAA+AGG - chr4_3:1837760-1837779 Msa0623990:intron 35.0%
TGATGTTACTGATGAAGTGA+AGG - chr4_3:1838033-1838052 Msa0623990:intron 35.0%
GATGTTACTGATGAAGTGAA+GGG - chr4_3:1838034-1838053 Msa0623990:intron 35.0%
TTTGAAGAATGTGCAACATC+AGG + chr4_3:1838130-1838149 None:intergenic 35.0%
GTTGCACATTCTTCAAAAGA+TGG - chr4_3:1838133-1838152 Msa0623990:intron 35.0%
ATTCTTCAAAAGATGGCTTG+TGG - chr4_3:1838140-1838159 Msa0623990:intron 35.0%
!! TGATAGCTCGGTTCTAAAAA+AGG - chr4_3:1838276-1838295 Msa0623990:intron 35.0%
!!! ACTGCATCAATGTCATTTTC+AGG - chr4_3:1838469-1838488 Msa0623990:intron 35.0%
CAATCTGTTGGAAAATCAGT+TGG - chr4_3:1838553-1838572 Msa0623990:CDS 35.0%
!! TTAGACACTCAAGCTTTGAA+AGG - chr4_3:1838718-1838737 Msa0623990:CDS 35.0%
! CTTTGAAAGGTCAACATTCT+CGG - chr4_3:1838731-1838750 Msa0623990:CDS 35.0%
TTTGAAAGGTCAACATTCTC+GGG - chr4_3:1838732-1838751 Msa0623990:CDS 35.0%
TCTAGAAGGAAGCTCAAAAA+TGG - chr4_3:1838756-1838775 Msa0623990:CDS 35.0%
CTAGAAGGAAGCTCAAAAAT+GGG - chr4_3:1838757-1838776 Msa0623990:CDS 35.0%
AAAAAAAGGGAAAGGAGTAG+TGG - chr4_3:1838907-1838926 Msa0623990:CDS 35.0%
AAAGTTGTTCTTGTCCTTTC+TGG + chr4_3:1838954-1838973 None:intergenic 35.0%
! AGGACAAGAACAACTTTTGA+TGG - chr4_3:1838957-1838976 Msa0623990:CDS 35.0%
! GGACAAGAACAACTTTTGAT+GGG - chr4_3:1838958-1838977 Msa0623990:CDS 35.0%
AGAAAGTTCCATGAAATGTC+TGG - chr4_3:1839045-1839064 Msa0623990:CDS 35.0%
GTACATGACACATATGAAAG+AGG - chr4_3:1839071-1839090 Msa0623990:CDS 35.0%
!! CACATATGAAAGAGGGTATT+CGG - chr4_3:1839079-1839098 Msa0623990:CDS 35.0%
!! ACATATGAAAGAGGGTATTC+GGG - chr4_3:1839080-1839099 Msa0623990:CDS 35.0%
ATCACCTAGGTGAAGATAAT+GGG + chr4_3:1839250-1839269 None:intergenic 35.0%
TATCACCTAGGTGAAGATAA+TGG + chr4_3:1839251-1839270 None:intergenic 35.0%
AGAAATGGACATAGTACTAC+TGG - chr4_3:1839519-1839538 Msa0623990:CDS 35.0%
CATAGTACTACTGGAACAAA+AGG - chr4_3:1839528-1839547 Msa0623990:CDS 35.0%
AGGAACTTGAATATGTGAAG+AGG - chr4_3:1839667-1839686 Msa0623990:CDS 35.0%
AATTAAGTCAAACCTTCCTG+AGG - chr4_3:1839764-1839783 Msa0623990:CDS 35.0%
GTAAATCATTCTGTTAGACC+TGG - chr4_3:1840284-1840303 Msa0623990:CDS 35.0%
!!! TGTTAGACCTGGCATTTTTT+CGG - chr4_3:1840295-1840314 Msa0623990:CDS 35.0%
ATACATTCCGAAAAAATGCC+AGG + chr4_3:1840305-1840324 None:intergenic 35.0%
TCCATGACAGATATATCATG+TGG - chr4_3:1840342-1840361 Msa0623990:CDS 35.0%
TCCACATGATATATCTGTCA+TGG + chr4_3:1840346-1840365 None:intergenic 35.0%
GGTGTTTCCTCAATTTAGTT+CGG - chr4_3:1840380-1840399 Msa0623990:CDS 35.0%
AGTTCGGCATATATGTTCTT+TGG - chr4_3:1840396-1840415 Msa0623990:CDS 35.0%
TGCTTCACGATTCAGAAAAT+TGG - chr4_3:1840884-1840903 Msa0623990:CDS 35.0%
! CCATTGTCCTTTTATCATTC+TGG + chr4_3:1841145-1841164 None:intergenic 35.0%
CCAGAATGATAAAAGGACAA+TGG - chr4_3:1841142-1841161 Msa0623990:CDS 35.0%
TGTCTCATCCTGAAATTTGT+AGG - chr4_3:1841574-1841593 Msa0623990:CDS 35.0%
CACTAGAACCTACAAATTTC+AGG + chr4_3:1841585-1841604 None:intergenic 35.0%
TACAGTAGCTCACAACAATA+AGG + chr4_3:1841613-1841632 None:intergenic 35.0%
AAGACTGATAACTACTGTGA+TGG + chr4_3:1841713-1841732 None:intergenic 35.0%
TAAACCAGAAACCTTTACCT+TGG - chr4_3:1841857-1841876 Msa0623990:five_prime_UTR 35.0%
GAGAGAGAAAGAGAAAGAGT+TGG + chr4_3:1836413-1836432 None:intergenic 40.0%
!! GGTTTGTTGAACCGAAGATT+GGG + chr4_3:1836563-1836582 None:intergenic 40.0%
AAACGCAGAGCACATGAAAA+CGG + chr4_3:1836596-1836615 None:intergenic 40.0%
! TTTTCATGTGCTCTGCGTTT+TGG - chr4_3:1836596-1836615 Msa0623990:three_prime_UTR 40.0%
AGCGAAGATCTTCATTCGTA+TGG - chr4_3:1836672-1836691 Msa0623990:three_prime_UTR 40.0%
AAGAACGGTGGTGATAAGAA+TGG - chr4_3:1836699-1836718 Msa0623990:three_prime_UTR 40.0%
TGGTGATAAGAATGGTGTGA+AGG - chr4_3:1836707-1836726 Msa0623990:three_prime_UTR 40.0%
! AACCGTTCGTTTTCATCTAC+TGG - chr4_3:1836744-1836763 Msa0623990:exon 40.0%
GACCAGTAGATGAAAACGAA+CGG + chr4_3:1836749-1836768 None:intergenic 40.0%
!! GGAGGTGTTGATAGGAATAT+TGG - chr4_3:1836990-1837009 Msa0623990:CDS 40.0%
!! GGTGTTGATAGGAATATTGG+GGG - chr4_3:1836993-1837012 Msa0623990:CDS 40.0%
GCAGTCGAAGAAGAGAAATT+CGG - chr4_3:1837361-1837380 Msa0623990:intron 40.0%
!! GAACAATCGAAGAGTGTTAG+TGG - chr4_3:1837455-1837474 Msa0623990:intron 40.0%
! AAGTGGTAGTGAAATGGAAG+AGG - chr4_3:1837526-1837545 Msa0623990:intron 40.0%
! AGTGGTAGTGAAATGGAAGA+GGG - chr4_3:1837527-1837546 Msa0623990:intron 40.0%
CAGGTTTCAGTTCAGTTTCA+CGG + chr4_3:1837574-1837593 None:intergenic 40.0%
AGGTGATGCAGATGTTGTTA+TGG - chr4_3:1837679-1837698 Msa0623990:intron 40.0%
AAAACAGACCTTGTCGAGTA+AGG - chr4_3:1837706-1837725 Msa0623990:intron 40.0%
!! TACGCAGGATATTGATTCTG+AGG - chr4_3:1837742-1837761 Msa0623990:intron 40.0%
GTTGGATCATCTTGAGTCTT+AGG + chr4_3:1837800-1837819 None:intergenic 40.0%
AAGAAGGACGAGTGTTTGAA+CGG - chr4_3:1837875-1837894 Msa0623990:intron 40.0%
AACAAACCCGAGTCAATTGA+AGG - chr4_3:1837998-1838017 Msa0623990:intron 40.0%
AGTGAAGGGAGAAACAATGA+CGG - chr4_3:1838048-1838067 Msa0623990:intron 40.0%
GAGTGTGATCAACAATGTGA+AGG - chr4_3:1838078-1838097 Msa0623990:intron 40.0%
!! GACTTTTCTGCTTTTCTCAC+AGG + chr4_3:1838256-1838275 None:intergenic 40.0%
AGCAGAAAAGTCTGATAGCT+CGG - chr4_3:1838264-1838283 Msa0623990:intron 40.0%
AACGATGACAGTCTTGCAAT+GGG - chr4_3:1838301-1838320 Msa0623990:intron 40.0%
CCTATCGGTAACAGAACATT+CGG + chr4_3:1838352-1838371 None:intergenic 40.0%
! GTGGACTATGAACAATCTGT+TGG - chr4_3:1838541-1838560 Msa0623990:CDS 40.0%
AATCAAATCCCTGGAACAAG+GGG + chr4_3:1838585-1838604 None:intergenic 40.0%
CAATCAAATCCCTGGAACAA+GGG + chr4_3:1838586-1838605 None:intergenic 40.0%
GAGGGAACTTCTTTCTGTTT+GGG + chr4_3:1838634-1838653 None:intergenic 40.0%
AGAGGGAACTTCTTTCTGTT+TGG + chr4_3:1838635-1838654 None:intergenic 40.0%
ATCGAAGTTCTCTGACTAGA+GGG + chr4_3:1838652-1838671 None:intergenic 40.0%
AGTCAGAGAACTTCGATGAA+TGG - chr4_3:1838655-1838674 Msa0623990:CDS 40.0%
GTCAGAGAACTTCGATGAAT+GGG - chr4_3:1838656-1838675 Msa0623990:CDS 40.0%
AGAACTTCGATGAATGGGAA+CGG - chr4_3:1838661-1838680 Msa0623990:CDS 40.0%
! CAAGACGACATGATGATGTT+CGG - chr4_3:1838830-1838849 Msa0623990:CDS 40.0%
! CAAGAACAACTTTTGATGGG+TGG - chr4_3:1838961-1838980 Msa0623990:CDS 40.0%
ATGGAACTTTCTCGACATCA+CGG + chr4_3:1839037-1839056 None:intergenic 40.0%
TGTACTGTCCAGACATTTCA+TGG + chr4_3:1839056-1839075 None:intergenic 40.0%
GAAAAGCAAGTATCTGACCA+TGG + chr4_3:1839128-1839147 None:intergenic 40.0%
GAACAGGTCTGATATAACCT+TGG - chr4_3:1839161-1839180 Msa0623990:CDS 40.0%
ACACTTCACTAGAACATCCA+AGG + chr4_3:1839181-1839200 None:intergenic 40.0%
TTAGCCCATTATCTTCACCT+AGG - chr4_3:1839243-1839262 Msa0623990:CDS 40.0%
TTGCAATCACATTCATCGAC+CGG + chr4_3:1839348-1839367 None:intergenic 40.0%
! AAGCTTTGTGTGCAGAAGAA+TGG - chr4_3:1839366-1839385 Msa0623990:CDS 40.0%
! TGCAGAAGAATGGTTTTTGC+AGG - chr4_3:1839376-1839395 Msa0623990:CDS 40.0%
! GCAGAAGAATGGTTTTTGCA+GGG - chr4_3:1839377-1839396 Msa0623990:CDS 40.0%
CAAAGCCAAACATCTCAGAA+GGG + chr4_3:1839593-1839612 None:intergenic 40.0%
ACAAAGCCAAACATCTCAGA+AGG + chr4_3:1839594-1839613 None:intergenic 40.0%
!! GATGTTTGGCTTTGTCAAAG+AGG - chr4_3:1839599-1839618 Msa0623990:CDS 40.0%
CATTTGTTTGCTTACCAGAG+AGG + chr4_3:1839812-1839831 None:intergenic 40.0%
GTATGCAGGTCAATGATACT+CGG - chr4_3:1840044-1840063 Msa0623990:CDS 40.0%
TCTTTGGACGTTTGCATCAT+TGG - chr4_3:1840412-1840431 Msa0623990:CDS 40.0%
! TTGCATCATTGGTGTTTGTG+AGG - chr4_3:1840423-1840442 Msa0623990:CDS 40.0%
! TGCATCATTGGTGTTTGTGT+AGG - chr4_3:1840503-1840522 Msa0623990:CDS 40.0%
CGGTAGACTACACTAAGTTT+AGG + chr4_3:1840701-1840720 None:intergenic 40.0%
! GTAGTCTACCGTTTTCTGTT+TGG - chr4_3:1840710-1840729 Msa0623990:CDS 40.0%
! GATTCAGAAAATTGGTCTCC+TGG - chr4_3:1840892-1840911 Msa0623990:CDS 40.0%
AAAGAGAACAGTGTTGTAGC+TGG - chr4_3:1841029-1841048 Msa0623990:CDS 40.0%
AAGAGAACAGTGTTGTAGCT+GGG - chr4_3:1841030-1841049 Msa0623990:CDS 40.0%
CATTCTGGTCAAATCTTGGA+AGG + chr4_3:1841130-1841149 None:intergenic 40.0%
TGATAAAAGGACAATGGTGC+AGG - chr4_3:1841148-1841167 Msa0623990:CDS 40.0%
! AGCACGCGATTGAAACATTT+TGG + chr4_3:1841252-1841271 None:intergenic 40.0%
TCAACCGAATCACCAAGTTA+CGG - chr4_3:1841348-1841367 Msa0623990:CDS 40.0%
! TGAACCGTAACTTGGTGATT+CGG + chr4_3:1841355-1841374 None:intergenic 40.0%
TGAAATGCGTAAGCGAAAGT+TGG - chr4_3:1841385-1841404 Msa0623990:CDS 40.0%
!! AAGAACTCCATGGATTAGAG+AGG - chr4_3:1841408-1841427 Msa0623990:CDS 40.0%
!! AGAACTCCATGGATTAGAGA+GGG - chr4_3:1841409-1841428 Msa0623990:CDS 40.0%
TTTGATCTGGTCACATTGCA+AGG + chr4_3:1841520-1841539 None:intergenic 40.0%
!!! GTGATGGACTCTACAGATTT+TGG + chr4_3:1841697-1841716 None:intergenic 40.0%
AAAAATGGTCAGCATTTGGC+TGG - chr4_3:1841787-1841806 Msa0623990:five_prime_UTR 40.0%
!! GGGTTTGTTGAACCGAAGAT+TGG + chr4_3:1836564-1836583 None:intergenic 45.0%
TCGTATGGTGAAAAGAACGG+TGG - chr4_3:1836687-1836706 Msa0623990:three_prime_UTR 45.0%
!! AGATCGGGAAGGTTCTAGAT+TGG - chr4_3:1836863-1836882 Msa0623990:CDS 45.0%
!! GGGAAGGTTCTAGATTGGTT+AGG - chr4_3:1836868-1836887 Msa0623990:CDS 45.0%
!! TGATGGGTTTGATAGGAGGA+AGG - chr4_3:1836911-1836930 Msa0623990:CDS 45.0%
! GATGGGTTTGATAGGAGGAA+GGG - chr4_3:1836912-1836931 Msa0623990:CDS 45.0%
ATAGGAGGAAGGGTTTCGAT+CGG - chr4_3:1836922-1836941 Msa0623990:CDS 45.0%
!! GGGGTGCTGAAAGGAATATT+GGG - chr4_3:1837012-1837031 Msa0623990:CDS 45.0%
!! GGGTGCTGAAAGGAATATTG+GGG - chr4_3:1837013-1837032 Msa0623990:CDS 45.0%
! GGTGCTGAAAGGAATATTGG+GGG - chr4_3:1837014-1837033 Msa0623990:CDS 45.0%
!!! GGGGTGCTGAAAGGAATTTT+GGG - chr4_3:1837054-1837073 Msa0623990:CDS 45.0%
!!! GGGTGCTGAAAGGAATTTTG+GGG - chr4_3:1837055-1837074 Msa0623990:CDS 45.0%
!! GGTGCTGAAAGGAATTTTGG+GGG - chr4_3:1837056-1837075 Msa0623990:CDS 45.0%
!!! GGAATTTTGGGGGTGTTGAA+AGG - chr4_3:1837066-1837085 Msa0623990:CDS 45.0%
!! GGGGTGTTGAAAGGAATAGT+GGG - chr4_3:1837075-1837094 Msa0623990:CDS 45.0%
!! GGGTGTTGAAAGGAATAGTG+GGG - chr4_3:1837076-1837095 Msa0623990:CDS 45.0%
! GGTGTTGAAAGGAATAGTGG+GGG - chr4_3:1837077-1837096 Msa0623990:CDS 45.0%
TGGTAGTAGGGTTGAAGAGA+GGG - chr4_3:1837268-1837287 Msa0623990:CDS 45.0%
ACATCCCTCGAAAAACCCTT+CGG + chr4_3:1837305-1837324 None:intergenic 45.0%
AGAGAAATTCGGAGTCTCCA+AGG - chr4_3:1837372-1837391 Msa0623990:intron 45.0%
GAGAAATTCGGAGTCTCCAA+GGG - chr4_3:1837373-1837392 Msa0623990:intron 45.0%
TTAACCTCCCTAAACACCCT+TGG + chr4_3:1837392-1837411 None:intergenic 45.0%
TAAGTCGCCTTCTGTGTCTA+AGG - chr4_3:1837421-1837440 Msa0623990:intron 45.0%
GCCTTCTGTGTCTAAGGATT+CGG - chr4_3:1837427-1837446 Msa0623990:intron 45.0%
TCCGAATCCTTAGACACAGA+AGG + chr4_3:1837431-1837450 None:intergenic 45.0%
!! GAAGAGTGTTAGTGGTGTTG+AGG - chr4_3:1837463-1837482 Msa0623990:intron 45.0%
TGTTGAGGTGAAGAAAAGCG+AGG - chr4_3:1837478-1837497 Msa0623990:intron 45.0%
TTGTTGCAACAGGTTCAGAG+TGG - chr4_3:1837503-1837522 Msa0623990:intron 45.0%
! GAGTGGAAGTGGTAGTGAAA+TGG - chr4_3:1837520-1837539 Msa0623990:intron 45.0%
! GTGGTAGTGAAATGGAAGAG+GGG - chr4_3:1837528-1837547 Msa0623990:intron 45.0%
! TGGTAGTGAAATGGAAGAGG+GGG - chr4_3:1837529-1837548 Msa0623990:intron 45.0%
TTCAGTTCAGTTTCACGGAC+CGG + chr4_3:1837569-1837588 None:intergenic 45.0%
TGCTCCGAAAGATGAAGCAT+CGG - chr4_3:1837592-1837611 Msa0623990:intron 45.0%
CTTCCCGATGCTTCATCTTT+CGG + chr4_3:1837599-1837618 None:intergenic 45.0%
ATGCACTTGTTTGTCCTCAG+AGG + chr4_3:1837636-1837655 None:intergenic 45.0%
TGCTTCTTCCTTACTCGACA+AGG + chr4_3:1837717-1837736 None:intergenic 45.0%
GGAAGAAGCAAAACATACGC+AGG - chr4_3:1837727-1837746 Msa0623990:intron 45.0%
TCTGTTGCTGAGAGTGAGAT+TGG - chr4_3:1837830-1837849 Msa0623990:intron 45.0%
AGAAGGACGAGTGTTTGAAC+GGG - chr4_3:1837876-1837895 Msa0623990:intron 45.0%
GTTTGAACGGGGATGATACT+CGG - chr4_3:1837888-1837907 Msa0623990:intron 45.0%
!! TACTCGGTGTAAGGAGGAAA+CGG - chr4_3:1837904-1837923 Msa0623990:intron 45.0%
TGTAAGGAGGAAACGGAGAA+GGG - chr4_3:1837911-1837930 Msa0623990:intron 45.0%
AACGGAGAAGGGAACAGATA+AGG - chr4_3:1837922-1837941 Msa0623990:intron 45.0%
ACGGAGAAGGGAACAGATAA+GGG - chr4_3:1837923-1837942 Msa0623990:intron 45.0%
GAAGGCGATGCTTAATGAAG+AGG - chr4_3:1837946-1837965 Msa0623990:intron 45.0%
! GTTGAGCCTTCAATTGACTC+GGG + chr4_3:1838007-1838026 None:intergenic 45.0%
GGTTGAGCCTTCAATTGACT+CGG + chr4_3:1838008-1838027 None:intergenic 45.0%
! GATGGCTTGTGGATTGATAG+AGG - chr4_3:1838151-1838170 Msa0623990:intron 45.0%
GAATGATCTTGCAACATGCC+CGG - chr4_3:1838177-1838196 Msa0623990:intron 45.0%
!! TTCTGCTTTTCTCACAGGAG+AGG + chr4_3:1838251-1838270 None:intergenic 45.0%
GAACGATGACAGTCTTGCAA+TGG - chr4_3:1838300-1838319 Msa0623990:intron 45.0%
AGCTAAGAGAAAGGTCAAGC+TGG + chr4_3:1838327-1838346 None:intergenic 45.0%
CATTCGGCAAGCTAAGAGAA+AGG + chr4_3:1838336-1838355 None:intergenic 45.0%
CCGAATGTTCTGTTACCGAT+AGG - chr4_3:1838349-1838368 Msa0623990:intron 45.0%
CCAATCAAATCCCTGGAACA+AGG + chr4_3:1838587-1838606 None:intergenic 45.0%
CCTTGTTCCAGGGATTTGAT+TGG - chr4_3:1838584-1838603 Msa0623990:CDS 45.0%
CATCGAAGTTCTCTGACTAG+AGG + chr4_3:1838653-1838672 None:intergenic 45.0%
TTTACCAGCCACAAGCATCA+TGG - chr4_3:1838689-1838708 Msa0623990:CDS 45.0%
TTACCAGCCACAAGCATCAT+GGG - chr4_3:1838690-1838709 Msa0623990:CDS 45.0%
AAAACACCCCATGATGCTTG+TGG + chr4_3:1838700-1838719 None:intergenic 45.0%
GAAGCTCAAAAATGGGCAGT+GGG - chr4_3:1838764-1838783 Msa0623990:CDS 45.0%
! AGTGTTGGGTCTCATGACAA+TGG - chr4_3:1838865-1838884 Msa0623990:CDS 45.0%
AAAAGGGAAAGGAGTAGTGG+TGG - chr4_3:1838910-1838929 Msa0623990:CDS 45.0%
! TTGTTCTTGTCCTTTCTGGC+TGG + chr4_3:1838950-1838969 None:intergenic 45.0%
TGGAACTTTCTCGACATCAC+GGG + chr4_3:1839036-1839055 None:intergenic 45.0%
ATGCTCAATGCAGATAGCCA+TGG - chr4_3:1839108-1839127 Msa0623990:CDS 45.0%
TCGAGTGCAACTGGAAATTC+TGG - chr4_3:1839203-1839222 Msa0623990:CDS 45.0%
ATCATGTCGAAGTCAGTTGC+CGG - chr4_3:1839326-1839345 Msa0623990:CDS 45.0%
TCGAACACTGTTAGTTGGGT+TGG - chr4_3:1839438-1839457 Msa0623990:CDS 45.0%
CGAACACTGTTAGTTGGGTT+GGG - chr4_3:1839439-1839458 Msa0623990:CDS 45.0%
GGTGTGATGTTTGTCTTCAC+TGG - chr4_3:1839460-1839479 Msa0623990:CDS 45.0%
! GTCATACTGACTGTGGATTG+CGG - chr4_3:1839484-1839503 Msa0623990:CDS 45.0%
! TCATACTGACTGTGGATTGC+GGG - chr4_3:1839485-1839504 Msa0623990:CDS 45.0%
!! GATCACCCTTCTGAGATGTT+TGG - chr4_3:1839585-1839604 Msa0623990:CDS 45.0%
GTCAGCCGAATCTCTTTACA+AGG - chr4_3:1839647-1839666 Msa0623990:CDS 45.0%
TCTGCCAGCAAGGATATAAG+AGG - chr4_3:1839696-1839715 Msa0623990:CDS 45.0%
CTGCCAGCAAGGATATAAGA+GGG - chr4_3:1839697-1839716 Msa0623990:CDS 45.0%
TCTCCCTCTTATATCCTTGC+TGG + chr4_3:1839703-1839722 None:intergenic 45.0%
TTGCAGATCAAATGCTGCCA+AGG - chr4_3:1839736-1839755 Msa0623990:CDS 45.0%
ATGATGCGTCTCAAAACCTC+AGG + chr4_3:1839783-1839802 None:intergenic 45.0%
ATTGTACTTTGGGCGTATGC+AGG - chr4_3:1840030-1840049 Msa0623990:CDS 45.0%
GTTCGTTGTCAGGGCTAATT+TGG + chr4_3:1840988-1841007 None:intergenic 45.0%
TCCAGAGAAGTTCGTTGTCA+GGG + chr4_3:1840997-1841016 None:intergenic 45.0%
TTCCAGAGAAGTTCGTTGTC+AGG + chr4_3:1840998-1841017 None:intergenic 45.0%
! GACAACGAACTTCTCTGGAA+AGG - chr4_3:1840998-1841017 Msa0623990:CDS 45.0%
! TTCAGATAAGGCACCTCTGT+TGG - chr4_3:1841088-1841107 Msa0623990:CDS 45.0%
AATCTTGGAAGGATGCTTGC+AGG + chr4_3:1841119-1841138 None:intergenic 45.0%
ATGCTAGGAGAGAAGCTGAA+GGG - chr4_3:1841276-1841295 Msa0623990:CDS 45.0%
TGTCTCAGTGAACCGTAACT+TGG + chr4_3:1841363-1841382 None:intergenic 45.0%
CGAAAGTTGGAAGAACTCCA+TGG - chr4_3:1841398-1841417 Msa0623990:CDS 45.0%
TATGTGCCCTCTCTAATCCA+TGG + chr4_3:1841418-1841437 None:intergenic 45.0%
! TGGATTAGAGAGGGCACATA+TGG - chr4_3:1841418-1841437 Msa0623990:CDS 45.0%
AAGATTGGGAATTGTGCCGG+CGG + chr4_3:1836549-1836568 None:intergenic 50.0%
CCGAAGATTGGGAATTGTGC+CGG + chr4_3:1836552-1836571 None:intergenic 50.0%
CCGGCACAATTCCCAATCTT+CGG - chr4_3:1836549-1836568 Msa0623990:three_prime_UTR 50.0%
GTCTTCGTCGCGATACGATA+GGG - chr4_3:1836824-1836843 Msa0623990:CDS 50.0%
GCGATACGATAGGGATCGAA+CGG - chr4_3:1836833-1836852 Msa0623990:CDS 50.0%
ATACGATAGGGATCGAACGG+TGG - chr4_3:1836836-1836855 Msa0623990:CDS 50.0%
ATCGAACGGTGGAGGAAGAT+CGG - chr4_3:1836847-1836866 Msa0623990:CDS 50.0%
TAGGAGGAAGGGTTTCGATC+GGG - chr4_3:1836923-1836942 Msa0623990:CDS 50.0%
!! GGTACAGTGGAGGTGTTGAT+AGG - chr4_3:1836982-1837001 Msa0623990:CDS 50.0%
!! GGAATATTGGGGGTGCTGAA+AGG - chr4_3:1837003-1837022 Msa0623990:CDS 50.0%
!! GGGGGTGCTGAAAGGAATAT+TGG - chr4_3:1837011-1837030 Msa0623990:CDS 50.0%
!! GGAATATTGGGGGTGCTGAA+AGG - chr4_3:1837003-1837022 Msa0623990:CDS 50.0%
!!! GGGGGTGCTGAAAGGAATTT+TGG - chr4_3:1837053-1837072 Msa0623990:CDS 50.0%
!! GGGGGTGTTGAAAGGAATAG+TGG - chr4_3:1837074-1837093 Msa0623990:CDS 50.0%
! GTTGAAAGGAATAGTGGGGG+TGG - chr4_3:1837080-1837099 Msa0623990:CDS 50.0%
CATAGGTCGGAGAGTTTCTG+TGG - chr4_3:1837119-1837138 Msa0623990:CDS 50.0%
AGAGTTTCTGTGGAGGGTCA+AGG - chr4_3:1837129-1837148 Msa0623990:CDS 50.0%
TTTCTGTGGAGGGTCAAGGA+GGG - chr4_3:1837133-1837152 Msa0623990:CDS 50.0%
TCAAGGAGGGAGTTTCCGAA+GGG - chr4_3:1837146-1837165 Msa0623990:CDS 50.0%
GTTTCCGAAGGGGTTTCGAT+CGG - chr4_3:1837157-1837176 Msa0623990:CDS 50.0%
GATGAGAGTAGTAGAGGGAG+TGG - chr4_3:1837242-1837261 Msa0623990:CDS 50.0%
GTGGTAGTAGGGTTGAAGAG+AGG - chr4_3:1837267-1837286 Msa0623990:CDS 50.0%
TAGTAGGGTTGAAGAGAGGG+TGG - chr4_3:1837271-1837290 Msa0623990:CDS 50.0%
!! GTCACCGAAGGGTTTTTCGA+GGG - chr4_3:1837298-1837317 Msa0623990:CDS 50.0%
GGGATGTGAAATCACCCAGT+TGG - chr4_3:1837318-1837337 Msa0623990:intron 50.0%
GAAATCACCCAGTTGGTCGA+AGG - chr4_3:1837325-1837344 Msa0623990:intron 50.0%
ACCCAGTTGGTCGAAGGATT+CGG - chr4_3:1837331-1837350 Msa0623990:intron 50.0%
TCCGAATCCTTCGACCAACT+GGG + chr4_3:1837335-1837354 None:intergenic 50.0%
!! GGAGTCTCCAAGGGTGTTTA+GGG - chr4_3:1837382-1837401 Msa0623990:intron 50.0%
AAGCGAGGAGTTGTTGCAAC+AGG - chr4_3:1837493-1837512 Msa0623990:intron 50.0%
CAACAGGTTCAGAGTGGAAG+TGG - chr4_3:1837509-1837528 Msa0623990:intron 50.0%
GATGCTTCATCTTTCGGAGC+AGG + chr4_3:1837593-1837612 None:intergenic 50.0%
! GCTCCGAAAGATGAAGCATC+GGG - chr4_3:1837593-1837612 Msa0623990:intron 50.0%
TGAAGTCCAGCAAACCTCTG+AGG - chr4_3:1837619-1837638 Msa0623990:intron 50.0%
GTTTGTCCTCAGAGGTTTGC+TGG + chr4_3:1837628-1837647 None:intergenic 50.0%
GAAGGACGAGTGTTTGAACG+GGG - chr4_3:1837877-1837896 Msa0623990:intron 50.0%
!! GGATGATACTCGGTGTAAGG+AGG - chr4_3:1837898-1837917 Msa0623990:intron 50.0%
GTGTAAGGAGGAAACGGAGA+AGG - chr4_3:1837910-1837929 Msa0623990:intron 50.0%
CGGAGAAGGGAACAGATAAG+GGG - chr4_3:1837924-1837943 Msa0623990:intron 50.0%
GAAGGGAACAGATAAGGGGA+AGG - chr4_3:1837928-1837947 Msa0623990:intron 50.0%
! GCTTAATGAAGAGGAGCGTG+AGG - chr4_3:1837955-1837974 Msa0623990:intron 50.0%
! TAATGAAGAGGAGCGTGAGG+AGG - chr4_3:1837958-1837977 Msa0623990:intron 50.0%
! CGTGAGGAGGATAATGGTGT+AGG - chr4_3:1837971-1837990 Msa0623990:intron 50.0%
! GAGGAGGATAATGGTGTAGG+TGG - chr4_3:1837974-1837993 Msa0623990:intron 50.0%
AACATGCCCGGTAGATGACA+TGG - chr4_3:1838189-1838208 Msa0623990:intron 50.0%
GACCTTCCATGTCATCTACC+GGG + chr4_3:1838198-1838217 None:intergenic 50.0%
GGACCTTCCATGTCATCTAC+CGG + chr4_3:1838199-1838218 None:intergenic 50.0%
ATGGAAGGTCCAAGCACAAG+AGG - chr4_3:1838208-1838227 Msa0623990:intron 50.0%
TGGAAGGTCCAAGCACAAGA+GGG - chr4_3:1838209-1838228 Msa0623990:intron 50.0%
TCTGTTACCGATAGGAGCTC+AGG - chr4_3:1838357-1838376 Msa0623990:intron 50.0%
TGAACACTCCGTGCTTGACT+GGG + chr4_3:1838409-1838428 None:intergenic 50.0%
TACCAGCCACAAGCATCATG+GGG - chr4_3:1838691-1838710 Msa0623990:CDS 50.0%
!! CAACATTCTCGGGCTCTAGA+AGG - chr4_3:1838742-1838761 Msa0623990:CDS 50.0%
GGAAGCTCAAAAATGGGCAG+TGG - chr4_3:1838763-1838782 Msa0623990:CDS 50.0%
CATCGAACTACCAGCCAGAA+AGG - chr4_3:1838937-1838956 Msa0623990:CDS 50.0%
! GAAGTGTCATCGAGTGCAAC+TGG - chr4_3:1839194-1839213 Msa0623990:CDS 50.0%
ACGCGTCGAACACTGTTAGT+TGG - chr4_3:1839433-1839452 Msa0623990:CDS 50.0%
CGCGTCGAACACTGTTAGTT+GGG - chr4_3:1839434-1839453 Msa0623990:CDS 50.0%
!! CACTGGTGTCATACTGACTG+TGG - chr4_3:1839477-1839496 Msa0623990:CDS 50.0%
! GAGGATCTTTTCTGCCAGCA+AGG - chr4_3:1839686-1839705 Msa0623990:CDS 50.0%
TGCGTCTCAAAACCTCAGGA+AGG + chr4_3:1839779-1839798 None:intergenic 50.0%
CGCATCATGTCTTTCCTCTC+TGG - chr4_3:1839795-1839814 Msa0623990:CDS 50.0%
CTTGCAGGTCTTTCCAACAG+AGG + chr4_3:1841104-1841123 None:intergenic 50.0%
GATGCTAGGAGAGAAGCTGA+AGG - chr4_3:1841275-1841294 Msa0623990:CDS 50.0%
CATGAAAACGGCGGTGGCTA+GGG + chr4_3:1836584-1836603 None:intergenic 55.0%
ACATGAAAACGGCGGTGGCT+AGG + chr4_3:1836585-1836604 None:intergenic 55.0%
AGAGCACATGAAAACGGCGG+TGG + chr4_3:1836590-1836609 None:intergenic 55.0%
CGCAGAGCACATGAAAACGG+CGG + chr4_3:1836593-1836612 None:intergenic 55.0%
CGTCTTCGTCGCGATACGAT+AGG - chr4_3:1836823-1836842 Msa0623990:CDS 55.0%
TCGAACGGTGGAGGAAGATC+GGG - chr4_3:1836848-1836867 Msa0623990:CDS 55.0%
GGAAGGGTTTCGATCGGGAT+CGG - chr4_3:1836928-1836947 Msa0623990:CDS 55.0%
GAAGGGTTTCGATCGGGATC+GGG - chr4_3:1836929-1836948 Msa0623990:CDS 55.0%
GTTTCGATCGGGATCGGGAT+CGG - chr4_3:1836934-1836953 Msa0623990:CDS 55.0%
!! GGGGTGCTGAAAGGAACAGT+GGG - chr4_3:1837033-1837052 Msa0623990:CDS 55.0%
!! GGGTGCTGAAAGGAACAGTG+GGG - chr4_3:1837034-1837053 Msa0623990:CDS 55.0%
! GGTGCTGAAAGGAACAGTGG+GGG - chr4_3:1837035-1837054 Msa0623990:CDS 55.0%
! GGAATAGTGGGGGTGGAGAT+AGG - chr4_3:1837087-1837106 Msa0623990:CDS 55.0%
AGGTCGGAGAGTTTCTGTGG+AGG - chr4_3:1837122-1837141 Msa0623990:CDS 55.0%
GGTCGGAGAGTTTCTGTGGA+GGG - chr4_3:1837123-1837142 Msa0623990:CDS 55.0%
GTTTCTGTGGAGGGTCAAGG+AGG - chr4_3:1837132-1837151 Msa0623990:CDS 55.0%
GTCAAGGAGGGAGTTTCCGA+AGG - chr4_3:1837145-1837164 Msa0623990:CDS 55.0%
CAAGGAGGGAGTTTCCGAAG+GGG - chr4_3:1837147-1837166 Msa0623990:CDS 55.0%
CTCTCCGATCGAAACCCCTT+CGG + chr4_3:1837164-1837183 None:intergenic 55.0%
GAAGGGGTTTCGATCGGAGA+GGG - chr4_3:1837163-1837182 Msa0623990:CDS 55.0%
GTCGTGGAGGAGAGGATTGA+AGG - chr4_3:1837214-1837233 Msa0623990:CDS 55.0%
GAGAGTAGTAGAGGGAGTGG+TGG - chr4_3:1837245-1837264 Msa0623990:CDS 55.0%
AGTAGTAGAGGGAGTGGTGG+TGG - chr4_3:1837248-1837267 Msa0623990:CDS 55.0%
!! AGGGAGTGGTGGTGGTAGTA+GGG - chr4_3:1837256-1837275 Msa0623990:CDS 55.0%
GGGTTGAAGAGAGGGTGGTT+AGG - chr4_3:1837276-1837295 Msa0623990:CDS 55.0%
AGGGTGGTTAGGTCACCGAA+GGG - chr4_3:1837287-1837306 Msa0623990:CDS 55.0%
! GGTCACCGAAGGGTTTTTCG+AGG - chr4_3:1837297-1837316 Msa0623990:CDS 55.0%
CTCCGAATCCTTCGACCAAC+TGG + chr4_3:1837336-1837355 None:intergenic 55.0%
!! CGGAGTCTCCAAGGGTGTTT+AGG - chr4_3:1837381-1837400 Msa0623990:intron 55.0%
!! GTCTCCAAGGGTGTTTAGGG+AGG - chr4_3:1837385-1837404 Msa0623990:intron 55.0%
! TCAGTTTCACGGACCGGTTC+AGG + chr4_3:1837563-1837582 None:intergenic 55.0%
!! CGGGGATGATACTCGGTGTA+AGG - chr4_3:1837895-1837914 Msa0623990:intron 55.0%
! GAGGAGCGTGAGGAGGATAA+TGG - chr4_3:1837965-1837984 Msa0623990:intron 55.0%
TGCCCGGTAGATGACATGGA+AGG - chr4_3:1838193-1838212 Msa0623990:intron 55.0%
AGCTCGAACCCTCTTGTGCT+TGG + chr4_3:1838220-1838239 None:intergenic 55.0%
GCTGCTTCCTGAGCTCCTAT+CGG + chr4_3:1838367-1838386 None:intergenic 55.0%
TGCTTGACTGGGAGATCCAG+GGG + chr4_3:1838398-1838417 None:intergenic 55.0%
GTGCTTGACTGGGAGATCCA+GGG + chr4_3:1838399-1838418 None:intergenic 55.0%
CTGGATCTCCCAGTCAAGCA+CGG - chr4_3:1838398-1838417 Msa0623990:intron 55.0%
CTGAACACTCCGTGCTTGAC+TGG + chr4_3:1838410-1838429 None:intergenic 55.0%
GGGCTTGCCAATCAAATCCC+TGG + chr4_3:1838594-1838613 None:intergenic 55.0%
TTGGCAAGCCCTATCTCAGC+AGG - chr4_3:1838603-1838622 Msa0623990:CDS 55.0%
TGGCAAGCCCTATCTCAGCA+GGG - chr4_3:1838604-1838623 Msa0623990:CDS 55.0%
GGGATCACCCTGCTGAGATA+GGG + chr4_3:1838614-1838633 None:intergenic 55.0%
TGGGATCACCCTGCTGAGAT+AGG + chr4_3:1838615-1838634 None:intergenic 55.0%
! GGTCTCCTACGCAGAGTGTT+GGG - chr4_3:1838851-1838870 Msa0623990:CDS 55.0%
TGAGACCCAACACTCTGCGT+AGG + chr4_3:1838859-1838878 None:intergenic 55.0%
GCCCTGACAACGAACTTCTC+TGG - chr4_3:1840993-1841012 Msa0623990:CDS 55.0%
ATTTCAGCCAGGCAGCTTCC+TGG + chr4_3:1841061-1841080 None:intergenic 55.0%
! AATCGCGTGCTGACGATGCT+AGG - chr4_3:1841261-1841280 Msa0623990:CDS 55.0%
GTTCTTCTGACTGTCGCCGT+AGG - chr4_3:1841827-1841846 Msa0623990:five_prime_UTR 55.0%
CGATAGGGATCGAACGGTGG+AGG - chr4_3:1836839-1836858 Msa0623990:CDS 60.0%
ACGGTGGAGGAAGATCGGGA+AGG - chr4_3:1836852-1836871 Msa0623990:CDS 60.0%
GGGATCGGGATCGGTATAGC+CGG - chr4_3:1836943-1836962 Msa0623990:CDS 60.0%
GGATCGGGATCGGTATAGCC+GGG - chr4_3:1836944-1836963 Msa0623990:CDS 60.0%
ATCGGTATAGCCGGGACAGC+CGG - chr4_3:1836952-1836971 Msa0623990:CDS 60.0%
CTCCACTGTACCCACCATCC+CGG + chr4_3:1836974-1836993 None:intergenic 60.0%
!! GGGGGTGCTGAAAGGAACAG+TGG - chr4_3:1837032-1837051 Msa0623990:CDS 60.0%
!! GGAACAGTGGGGGTGCTGAA+AGG - chr4_3:1837045-1837064 Msa0623990:CDS 60.0%
CGAAGGGGTTTCGATCGGAG+AGG - chr4_3:1837162-1837181 Msa0623990:CDS 60.0%
GATCGGAGAGGGATCGATCG+AGG - chr4_3:1837174-1837193 Msa0623990:CDS 60.0%
GGAGAGGGATCGATCGAGGA+GGG - chr4_3:1837178-1837197 Msa0623990:CDS 60.0%
AGGGATCGATCGAGGAGGGA+GGG - chr4_3:1837182-1837201 Msa0623990:CDS 60.0%
AGTGTGTCGTCGTGGAGGAG+AGG - chr4_3:1837206-1837225 Msa0623990:CDS 60.0%
!! GAGGGAGTGGTGGTGGTAGT+AGG - chr4_3:1837255-1837274 Msa0623990:CDS 60.0%
GAGGGTGGTTAGGTCACCGA+AGG - chr4_3:1837286-1837305 Msa0623990:CDS 60.0%
GGGGGAGCTTGAACCTGAAC+CGG - chr4_3:1837547-1837566 Msa0623990:intron 60.0%
CGTGCTTGACTGGGAGATCC+AGG + chr4_3:1838400-1838419 None:intergenic 60.0%
CACCCCATGATGCTTGTGGC+TGG + chr4_3:1838696-1838715 None:intergenic 60.0%
CGGTCTCCTACGCAGAGTGT+TGG - chr4_3:1838850-1838869 Msa0623990:CDS 60.0%
! ATTGTGCCGGCGGCGAGATG+TGG + chr4_3:1836539-1836558 None:intergenic 65.0%
TCGGTATAGCCGGGACAGCC+GGG - chr4_3:1836953-1836972 Msa0623990:CDS 65.0%
TATAGCCGGGACAGCCGGGA+TGG - chr4_3:1836957-1836976 Msa0623990:CDS 65.0%
!! AGCCGGGATGGTGGGTACAG+TGG - chr4_3:1836969-1836988 Msa0623990:CDS 65.0%
!! CGGGATGGTGGGTACAGTGG+AGG - chr4_3:1836972-1836991 Msa0623990:CDS 65.0%
CGGAGAGGGATCGATCGAGG+AGG - chr4_3:1837177-1837196 Msa0623990:CDS 65.0%
GAGGGATCGATCGAGGAGGG+AGG - chr4_3:1837181-1837200 Msa0623990:CDS 65.0%
GGGATCGATCGAGGAGGGAG+GGG - chr4_3:1837183-1837202 Msa0623990:CDS 65.0%
! AGGGGAGTGTGTCGTCGTGG+AGG - chr4_3:1837201-1837220 Msa0623990:CDS 65.0%
GAAGCAGCAACGCAAGCCCC+TGG - chr4_3:1838379-1838398 Msa0623990:intron 65.0%
TGGCAGTCGCCCCTTGTTCC+AGG - chr4_3:1838573-1838592 Msa0623990:CDS 65.0%
GGCAGTCGCCCCTTGTTCCA+GGG - chr4_3:1838574-1838593 Msa0623990:CDS 65.0%
TGTTGTAGCTGGGCCCAGCC+AGG - chr4_3:1841040-1841059 Msa0623990:CDS 65.0%
AGCCAGGCAGCTTCCTGGCT+GGG + chr4_3:1841056-1841075 None:intergenic 65.0%
TCACCGCCACATCTCGCCGC+CGG - chr4_3:1836530-1836549 Msa0623990:three_prime_UTR 70.0%
ACCCACCATCCCGGCTGTCC+CGG + chr4_3:1836965-1836984 None:intergenic 70.0%
! GGGAGGGGAGTGTGTCGTCG+TGG - chr4_3:1837198-1837217 Msa0623990:CDS 70.0%
CAGCCAGGCAGCTTCCTGGC+TGG + chr4_3:1841057-1841076 None:intergenic 70.0%
! GTGCCGGCGGCGAGATGTGG+CGG + chr4_3:1836536-1836555 None:intergenic 75.0%
AGCCGGGACAGCCGGGATGG+TGG - chr4_3:1836960-1836979 Msa0623990:CDS 75.0%
GCCGGGACAGCCGGGATGGT+GGG - chr4_3:1836961-1836980 Msa0623990:CDS 75.0%
GGCCCAGCCAGGAAGCTGCC+TGG - chr4_3:1841051-1841070 Msa0623990:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 1836408 1841882 1836408 ID=Msa0623990;Name=Msa0623990
chr4_3 mRNA 1836408 1841882 1836408 ID=Msa0623990-mRNA-1;Parent=Msa0623990;Name=Msa0623990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=246|1|1|1|1|1|2|353|1239
chr4_3 exon 1836408 1837317 1836408 ID=Msa0623990-mRNA-1:exon:502;Parent=Msa0623990-mRNA-1
chr4_3 exon 1838474 1841882 1838474 ID=Msa0623990-mRNA-1:exon:501;Parent=Msa0623990-mRNA-1
chr4_3 five_prime_UTR 1841637 1841882 1841637 ID=Msa0623990-mRNA-1:five_prime_utr;Parent=Msa0623990-mRNA-1
chr4_3 CDS 1838474 1841636 1838474 ID=Msa0623990-mRNA-1:cds;Parent=Msa0623990-mRNA-1
chr4_3 CDS 1836761 1837317 1836761 ID=Msa0623990-mRNA-1:cds;Parent=Msa0623990-mRNA-1
chr4_3 three_prime_UTR 1836408 1836760 1836408 ID=Msa0623990-mRNA-1:three_prime_utr;Parent=Msa0623990-mRNA-1
Gene Sequence

>Msa0623990

ATGAAGAGGTTAAGGTCAAGCGAAGATCTTCATTCGTATGGTGAAAAGAACGGTGGTGATAAGAATGGTGTGAAGGATTCATCGAATCTCAACCGTTCGTTTTCATCTACTGGTCAGAGAAGTTTTTATTATAAGCAGGAGAATGTAAGGAAGAGTTTAATTTCGTCGTCGTCTTCGTCGCGATACGATAGGGATCGAACGGTGGAGGAAGATCGGGAAGGTTCTAGATTGGTTAGGAAAAGATCTGAGCATGATTTTGATGGGTTTGATAGGAGGAAGGGTTTCGATCGGGATCGGGATCGGTATAGCCGGGACAGCCGGGATGGTGGGTACAGTGGAGGTGTTGATAGGAATATTGGGGGTGCTGAAAGGAATATTGGGGGTGCTGAAAGGAACAGTGGGGGTGCTGAAAGGAATTTTGGGGGTGTTGAAAGGAATAGTGGGGGTGGAGATAGGAATTTGATTCATAGGTCGGAGAGTTTCTGTGGAGGGTCAAGGAGGGAGTTTCCGAAGGGGTTTCGATCGGAGAGGGATCGATCGAGGAGGGAGGGGAGTGTGTCGTCGTGGAGGAGAGGATTGAAGGATTTTGATGAGAGTAGTAGAGGGAGTGGTGGTGGTAGTAGGGTTGAAGAGAGGGTGGTTAGGTCACCGAAGGGTTTTTCGAGGGATGTGAAATCACCCAGTTGGTCGAAGGATTCGGAGAGTGAGCAGTCGAAGAAGAGAAATTCGGAGTCTCCAAGGGTGTTTAGGGAGGTTAAGTCGAAATCTAAGTCGCCTTCTGTGTCTAAGGATTCGGAGAGTGAACAATCGAAGAGTGTTAGTGGTGTTGAGGTGAAGAAAAGCGAGGAGTTGTTGCAACAGGTTCAGAGTGGAAGTGGTAGTGAAATGGAAGAGGGGGAGCTTGAACCTGAACCGGTCCGTGAAACTGAACTGAAACCTGCTCCGAAAGATGAAGCATCGGGAAGTGAAGTCCAGCAAACCTCTGAGGACAAACAAGTGCATAAGAAAAAGAATGAATGTCGTTCAGGTGATGCAGATGTTGTTATGGAAGAAAAACAGACCTTGTCGAGTAAGGAAGAAGCAAAACATACGCAGGATATTGATTCTGAGGTAAAAGTTACAGGAAAGGAAGTTCTTGAGTTGCCTAAGACTCAAGATGATCCAACTAATGAAATATCTGTTGCTGAGAGTGAGATTGGAACCACAAGTAATGTTGATGATAAGAAGGACGAGTGTTTGAACGGGGATGATACTCGGTGTAAGGAGGAAACGGAGAAGGGAACAGATAAGGGGAAGGCGATGCTTAATGAAGAGGAGCGTGAGGAGGATAATGGTGTAGGTGGTAACAAACCCGAGTCAATTGAAGGCTCAACCGAGAATGATGTTACTGATGAAGTGAAGGGAGAAACAATGACGGAGAGTGTGAGTGTGATCAACAATGTGAAGGATAAAGGCAAAAGCGTCTCTGTCACACCTGATGTTGCACATTCTTCAAAAGATGGCTTGTGGATTGATAGAGGATCGAATGATCTTGCAACATGCCCGGTAGATGACATGGAAGGTCCAAGCACAAGAGGGTTCGAGCTTTTTTCTACCTCTCCTGTGAGAAAAGCAGAAAAGTCTGATAGCTCGGTTCTAAAAAAGGAGAACGATGACAGTCTTGCAATGGGCCAGCTTGACCTTTCTCTTAGCTTGCCGAATGTTCTGTTACCGATAGGAGCTCAGGAAGCAGCAACGCAAGCCCCTGGATCTCCCAGTCAAGCACGGAGTGTTCAGTCTCTAAGTAATACATTTTGTACTAACTCAGATGGTTTTACTGCATCAATGTCATTTTCAGGTTCCCAATCATTATATCACAATCCAAGTTGTTCTCTAACAAAAAATTCAGTGGACTATGAACAATCTGTTGGAAAATCAGTTGGCAGTCGCCCCTTGTTCCAGGGATTTGATTGGCAAGCCCTATCTCAGCAGGGTGATCCCAAACAGAAAGAAGTTCCCTCTAGTCAGAGAACTTCGATGAATGGGAACGGTTCTCTTTACCAGCCACAAGCATCATGGGGTGTTTTAGACACTCAAGCTTTGAAAGGTCAACATTCTCGGGCTCTAGAAGGAAGCTCAAAAATGGGCAGTGGGCTTGAAAAACAATTGAGTTTTCATAAGCAAATTTCAGGACAGTCAAGACGACATGATGATGTTCGGTCTCCTACGCAGAGTGTTGGGTCTCATGACAATGGATCAAATTATAGTTTTGAGAAAAAAAGGGAAAGGAGTAGTGGTGGTCTACATCGAACTACCAGCCAGAAAGGACAAGAACAACTTTTGATGGGTGGACTTGATTTTGTTAAGACAATCATTGCTAGAATTATTTCTGAATCTGTGCCCGTGATGTCGAGAAAGTTCCATGAAATGTCTGGACAGTACATGACACATATGAAAGAGGGTATTCGGGAACTCATGCTCAATGCAGATAGCCATGGTCAGATACTTGCTTTTCAAAAAATTCTGCAGAACAGGTCTGATATAACCTTGGATGTTCTAGTGAAGTGTCATCGAGTGCAACTGGAAATTCTGGTTGCAATAAAAACTGGTTTAGCCCATTATCTTCACCTAGGTGATAATATTTCATCTAATGATTTAGCTCAAGTTTTTCTAAACTTGAAGTGTAGGAATGTATCATGTCGAAGTCAGTTGCCGGTCGATGAATGTGATTGCAAGCTTTGTGTGCAGAAGAATGGTTTTTGCAGGGAATGTATGTGTCTTGTGTGCTCTAAGTTTGACAACGCGTCGAACACTGTTAGTTGGGTTGGGTGTGATGTTTGTCTTCACTGGTGTCATACTGACTGTGGATTGCGGGAATCTTATATTAGAAATGGACATAGTACTACTGGAACAAAAGGGACGACTGAGATGCAGTTTCATTGCATTGCTTGTGATCACCCTTCTGAGATGTTTGGCTTTGTCAAAGAGGTGTTTCAAAATTTTGCAAAAGAGTGGTCAGCCGAATCTCTTTACAAGGAACTTGAATATGTGAAGAGGATCTTTTCTGCCAGCAAGGATATAAGAGGGAGACAATTGCATGAGATTGCAGATCAAATGCTGCCAAGGTTGACAATTAAGTCAAACCTTCCTGAGGTTTTGAGACGCATCATGTCTTTCCTCTCTGATTGCGATTCTTCCAAATTAGCCCTGACAACGAACTTCTCTGGAAAGGAACAAGTCAAAGAGAACAGTGTTGTAGCTGGGCCCAGCCAGGAAGCTGCCTGGCTGAAATCTATTTATTCAGATAAGGCACCTCTGTTGGAAAGACCTGCAAGCATCCTTCCAAGATTTGACCAGAATGATAAAAGGACAATGGTGCAGGAGTTGCAGATGAGTAGTGTTCATAAAGACTTTGGTTTTGATGAATTGGACAGTATAATAAAAATCAAACATGCAGAGGCCAAAATGTTTCAATCGCGTGCTGACGATGCTAGGAGAGAAGCTGAAGGGTTGAAGCGCATTGCCCTTGCAAAGAATGAGAAAATTGAAGAAGAGTATGTCAACCGAATCACCAAGTTACGGTTCACTGAGACAGATGAAATGCGTAAGCGAAAGTTGGAAGAACTCCATGGATTAGAGAGGGCACATATGGAGTATTTGAACATGAAAATGAGAATGGAGTCAGACATCAAAGATCTGTTATCCAAAATGGAAGCAACTAAAATGAACCTTGCAATGTGA
Protein sequence

>Msa0623990

MKRLRSSEDLHSYGEKNGGDKNGVKDSSNLNRSFSSTGQRSFYYKQENVRKSLISSSSSSRYDRDRTVEEDREGSRLVRKRSEHDFDGFDRRKGFDRDRDRYSRDSRDGGYSGGVDRNIGGAERNIGGAERNSGGAERNFGGVERNSGGGDRNLIHRSESFCGGSRREFPKGFRSERDRSRREGSVSSWRRGLKDFDESSRGSGGGSRVEERVVRSPKGFSRDVKSPSWSKDSESEQSKKRNSESPRVFREVKSKSKSPSVSKDSESEQSKSVSGVEVKKSEELLQQVQSGSGSEMEEGELEPEPVRETELKPAPKDEASGSEVQQTSEDKQVHKKKNECRSGDADVVMEEKQTLSSKEEAKHTQDIDSEVKVTGKEVLELPKTQDDPTNEISVAESEIGTTSNVDDKKDECLNGDDTRCKEETEKGTDKGKAMLNEEEREEDNGVGGNKPESIEGSTENDVTDEVKGETMTESVSVINNVKDKGKSVSVTPDVAHSSKDGLWIDRGSNDLATCPVDDMEGPSTRGFELFSTSPVRKAEKSDSSVLKKENDDSLAMGQLDLSLSLPNVLLPIGAQEAATQAPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSLYHNPSCSLTKNSVDYEQSVGKSVGSRPLFQGFDWQALSQQGDPKQKEVPSSQRTSMNGNGSLYQPQASWGVLDTQALKGQHSRALEGSSKMGSGLEKQLSFHKQISGQSRRHDDVRSPTQSVGSHDNGSNYSFEKKRERSSGGLHRTTSQKGQEQLLMGGLDFVKTIIARIISESVPVMSRKFHEMSGQYMTHMKEGIRELMLNADSHGQILAFQKILQNRSDITLDVLVKCHRVQLEILVAIKTGLAHYLHLGDNISSNDLAQVFLNLKCRNVSCRSQLPVDECDCKLCVQKNGFCRECMCLVCSKFDNASNTVSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGTKGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSAESLYKELEYVKRIFSASKDIRGRQLHEIADQMLPRLTIKSNLPEVLRRIMSFLSDCDSSKLALTTNFSGKEQVKENSVVAGPSQEAAWLKSIYSDKAPLLERPASILPRFDQNDKRTMVQELQMSSVHKDFGFDELDSIIKIKHAEAKMFQSRADDARREAEGLKRIALAKNEKIEEEYVNRITKLRFTETDEMRKRKLEELHGLERAHMEYLNMKMRMESDIKDLLSKMEATKMNLAM*